FvH4_7g12710

Acyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
11533852 .. 11541069
7218 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g12710.t3

Sequence Viewer

Length: 1653 bp
ATGCCTTCAACCCATTACAACACCCAACCGACTCTGACCACCACCACCGCAATGGGCGAGGCCAGCCTCACCTCGCCGCTCCTCTCCTCCGATCAACCACCACCCCACTTGATCGTCACCGTCCACGACGACACCACCACCGAATTCCGCAACCCGTTCGAGTTTCTCGGGTCGGGCGGGTTCACGGTGCCGGCTTCGACGACGGCGGATCCGTTCAAGAACGCGACTTGGGCGGTGGAAGGGGTTTACGAGTGGGTGAAGATCGGGGTGTGCTTGCCGATCGCGATTGTGAGGCTTGTGATCTTCGGGGTTTCGTTGCTGGTGGGGTTTGTGGCGACCAAACTGGCTCTGTTGGGGTGGAAGGATCGGCAGAACCCTATGCCCAAATGGCGGTGTAGGATCATGTGGATCACTAGGGTTTGCACTCGCTGTATTCTCTTTGCTTTTGGTTATCATTGGATAAGGCGGAAAGGAAAACCTGCTCCAAGAGCTACTGCCCCAATTGTTGTATCTAATCATGTATCTTTTATAGAACCTATATTCTATTTTTACGAACTATTCCCAACGATTGTTGCATCTGAGTCCCATGATTCCCTACCTTTCGTTGGAACCATCATCAGAGCAATGCAGGTGATATATGTTAATAGGTTTGCACCATCGTCAAGGAGACAAGCTGTTAGTGAAATAAAGAGAAAAGCTGCGTGCGATAGATTTCCTCGAGTGCTCATATTTCCGGAGGGAACTACTACCAACGGAAGATATCTCATTTCATTTGAACTTGGTGCATTCATCTCTGGTTACCCAATCCAACCAGTAATTGTACGCTATCCTCATGTGCACTTTGATCAGTCCTGGGGGCACATTTCTTTGCCAAGGCTCATGTTTAGGATGTTCACACAATTTCACAATTTTATGGAGGTAGAGTACCTTCCTATTGTCTTTCCCCTTGATAACAAGAAAGAAAGTGCTTTCCACTTTGCTCAGAGGACTAGTCATGCTATGGCAGGTGCACTCAATGTTGTACAGACATCTCATTCTTTTGGAGATTTAATGCTACTCATGAAAGCAGCTGATTTGAAATCAAAACAGGTGCGGCCGTCAGCTTACATGGTTGAAATGGCGAGTGTAAAATCTTTAATCAATATAAGCAGCATGGAAGCCGTCGATCTTTTGGATAGGTTTCTTTCTATGAATCCAGACTCCAGTGGTCATGTTACCTATCATGATTTCCTGAGGGTTCTAAGACTCAAGCCCTGTACCTTTTCTGAAGAGATATTTGCATTCATTGATGTTGACAAAAATCGAGCCATCACATTTAAGCAGTTCTTATTTGGATCAGCGCATGTCTTGAAGCTACGATTATTCCGGCAATCCTGTGCATTAGCGTTTTCTGAATGTGTTTCTGGGGATAACAGCTATGTTTTAAAACAACAATTTGGAGACGTTATCAGGCCGGCAATCCCGGATTTGAACGAGGATGAGATCAATGAGCTGTTCAATTTATTTGATGCTGATTGTGATGGGAGAATTGGCAAGGACGAATTTCTCACTTGTCTAAGACGAAACCCATTACTAATTGCGCTTTTCTCACCTTGTTTGCTTAACAAAGACTTCTCAGAAGATGGTAATCAGGTGTTGGAAGAGATTGTGTAG

Protein Analysis

551

Amino Acids

62.29

Weight (kDa)

7.97

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 24 - 111 3.5e-09 Acyltransferase
EF-hand_7 PF13499 298 - 354 7.6e-07 EF-hand domain pair
EF-hand_8 PF13833 326 - 359 4e-08 EF-hand domain pair
EF-hand_1 PF00036 331 - 358 6.7e-06 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 619, 995
Acc36I ACCTGC 3 cut(s) 487, 619, 995
AccB1I GGYRCC 1 cut(s) 187
AccBSI CCGCTC 1 cut(s) 79
AccII CGCG 2 cut(s) 224, 284
AccIII TCCGGA 1 cut(s) 733
AciI CCGC 9 cut(s) 48, 77, 148, 177, 206, 233, 391, 466, 1093
AclWI GGATC 6 cut(s) 203, 216, 372, 407, 416, 1342
AcoI YGGCCR 1 cut(s) 1094
AcsI RAATTY 2 cut(s) 143, 1541
AcuI CTGAAG 1 cut(s) 1287
AfaI GTAC 4 cut(s) 822, 926, 1023, 1258
AfiI CCNNNNNNNGG 2 cut(s) 390, 605
AgsI TTSAA 8 cut(s) 9, 217, 776, 1078, 1115, 1351, 1471, 1498
AhlI ACTAGT 1 cut(s) 989
AjnI CCWGG 1 cut(s) 851
AluBI AGCT 8 cut(s) 491, 674, 698, 1070, 1103, 1354, 1416, 1492
AluI AGCT 8 cut(s) 491, 674, 698, 1070, 1103, 1354, 1416, 1492
Alw21I GWGCWC 3 cut(s) 726, 840, 1012
Alw26I GTCTC 2 cut(s) 661, 1434
Alw44I GTGCAC 2 cut(s) 836, 1008
AlwI GGATC 6 cut(s) 203, 216, 372, 407, 416, 1342
Ama87I CYCGRG 2 cut(s) 167, 717
Aor13HI TCCGGA 1 cut(s) 733
AoxI GGCC 3 cut(s) 60, 1094, 1451
ApaLI GTGCAC 2 cut(s) 836, 1008
ApeKI GCWGC 3 cut(s) 698, 1067, 1149
ApoI RAATTY 2 cut(s) 143, 1541
AspLEI GCGC 2 cut(s) 1342, 1582
AsuC2I CCSGG 1 cut(s) 1463
AsuHPI GGTGA 5 cut(s) 61, 109, 268, 643, 1581
AvaI CYCGRG 2 cut(s) 167, 717
AxyI CCTNAGG 1 cut(s) 1232
BaeGI GKGCMC 3 cut(s) 840, 861, 1012
BamHI GGATCC 1 cut(s) 208
BanI GGYRCC 1 cut(s) 187
BarI GAAGNNNNNNTAC 2 cut(s) 912, 944
Bbv12I GWGCWC 3 cut(s) 726, 840, 1012
BbvI GCAGC 3 cut(s) 685, 1079, 1161
BccI CCATC 5 cut(s) 620, 664, 1316, 1514, 1616
BceAI ACGGC 3 cut(s) 219, 1081, 1145
BcgI CGANNNNNNTGC 2 cut(s) 139, 173
BciT130I CCWGG 1 cut(s) 853
BclI TGATCA 1 cut(s) 844
BcnI CCSGG 1 cut(s) 1463
BcoDI GTCTC 2 cut(s) 661, 1434
BcuI ACTAGT 1 cut(s) 989
BfaI CTAG 2 cut(s) 414, 990
BfuAI ACCTGC 3 cut(s) 487, 619, 995
BglI GCCNNNNNGGC 1 cut(s) 388
BisI GCNGC 5 cut(s) 77, 699, 1068, 1094, 1150
BlsI GCNGC 5 cut(s) 78, 700, 1069, 1095, 1151
Bme1390I CCNGG 2 cut(s) 853, 1463
BmeT110I CYCGRG 2 cut(s) 167, 717
BmiI GGNNCC 3 cut(s) 189, 210, 610
BmrFI CCNGG 2 cut(s) 853, 1463
BmsI GCATC 2 cut(s) 584, 1498
BpmI CTGGAG 1 cut(s) 1186
BpuEI CTTGAG 1 cut(s) 1232
BpuMI CCSGG 1 cut(s) 1463
BsaBI GATNNNNATC 1 cut(s) 1626
BsaJI CCNNGG 2 cut(s) 852, 872
BsaWI WCCGGW 1 cut(s) 733
BsaXI ACNNNNNCTCC 2 cut(s) 908, 938
Bsc4I CCNNNNNNNGG 2 cut(s) 390, 605
Bse118I RCCGGY 2 cut(s) 190, 1453
Bse1I ACTGG 3 cut(s) 348, 812, 1203
Bse21I CCTNAGG 1 cut(s) 1232
Bse3DI GCAATG 2 cut(s) 57, 630
Bse8I GATNNNNATC 1 cut(s) 1626
BseAI TCCGGA 1 cut(s) 733
BseBI CCWGG 1 cut(s) 853
BseDI CCNNGG 2 cut(s) 852, 872
BseGI GGATG 2 cut(s) 894, 1483
BseJI GATNNNNATC 1 cut(s) 1626
BseLI CCNNNNNNNGG 2 cut(s) 390, 605
BseMI GCAATG 2 cut(s) 57, 630
BseMII CTCAG 4 cut(s) 570, 995, 1223, 1629
BseNI ACTGG 3 cut(s) 348, 812, 1203
BseRI GAGGAG 2 cut(s) 71, 76
BseSI GKGCMC 3 cut(s) 840, 861, 1012
BseX3I CGGCCG 1 cut(s) 1094
BseXI GCAGC 3 cut(s) 685, 1079, 1161
Bsh1236I CGCG 2 cut(s) 224, 284
Bsh1285I CGRYCG 2 cut(s) 282, 1097
BshFI GGCC 3 cut(s) 62, 1096, 1453
BshNI GGYRCC 1 cut(s) 187
BsiEI CGRYCG 2 cut(s) 282, 1097
BsiHKAI GWGCWC 3 cut(s) 726, 840, 1012
BsiHKCI CYCGRG 2 cut(s) 167, 717
BsiSI CCGG 5 cut(s) 191, 734, 1366, 1454, 1463
BslFI GGGAC 1 cut(s) 568
BslI CCNNNNNNNGG 2 cut(s) 390, 605
BsmAI GTCTC 2 cut(s) 661, 1434
BsmBI CGTCTC 1 cut(s) 1434
BsmFI GGGAC 1 cut(s) 568
BsmI GAATGC 2 cut(s) 785, 1280
BsnI GGCC 3 cut(s) 62, 1096, 1453
BsoBI CYCGRG 2 cut(s) 167, 717
Bsp1286I GDGCHC 4 cut(s) 726, 840, 861, 1012
Bsp13I TCCGGA 1 cut(s) 733
Bsp1407I TGTACA 1 cut(s) 1021
Bsp68I TCGCGA 1 cut(s) 284
BspACI CCGC 9 cut(s) 48, 77, 148, 177, 206, 233, 391, 466, 1093
BspANI GGCC 3 cut(s) 62, 1096, 1453
BspCNI CTCAG 4 cut(s) 571, 994, 1224, 1628
BspEI TCCGGA 1 cut(s) 733
BspFNI CGCG 2 cut(s) 224, 284
BspHI TCATGA 2 cut(s) 1059, 1222
BspLI GGNNCC 3 cut(s) 189, 210, 610
BspMI ACCTGC 3 cut(s) 487, 619, 995
BspPI GGATC 6 cut(s) 203, 216, 372, 407, 416, 1342
BspT107I GGYRCC 1 cut(s) 187
BsrBI CCGCTC 1 cut(s) 79
BsrDI GCAATG 2 cut(s) 57, 630
BsrFI RCCGGY 2 cut(s) 190, 1453
BsrGI TGTACA 1 cut(s) 1021
BsrI ACTGG 3 cut(s) 348, 812, 1203
BssAI RCCGGY 2 cut(s) 190, 1453
BssECI CCNNGG 2 cut(s) 852, 872
BssT1I CCWWGG 1 cut(s) 872
Bst2UI CCWGG 1 cut(s) 853
Bst4CI ACNGT 2 cut(s) 121, 187
Bst6I CTCTTC 2 cut(s) 1263, 1635
BstAUI TGTACA 1 cut(s) 1021
BstC8I GCNNGC 5 cut(s) 64, 192, 275, 703, 1455
BstDEI CTNAG 6 cut(s) 579, 981, 1232, 1241, 1556, 1615
BstEII GGTNACC 1 cut(s) 797
BstF5I GGATG 2 cut(s) 894, 1483
BstFNI CGCG 2 cut(s) 224, 284
BstHHI GCGC 2 cut(s) 1342, 1582
BstMAI GTCTC 2 cut(s) 661, 1434
BstMCI CGRYCG 2 cut(s) 282, 1097
BstMWI GCNNNNNNNGC 4 cut(s) 63, 230, 388, 488
BstNI CCWGG 1 cut(s) 853
BstNSI RCATGY 1 cut(s) 1346
BstPI GGTNACC 1 cut(s) 797
BstSCI CCNGG 2 cut(s) 851, 1461
BstSLI GKGCMC 3 cut(s) 840, 861, 1012
BstUI CGCG 2 cut(s) 224, 284
BstV1I GCAGC 3 cut(s) 685, 1079, 1161
BstX2I RGATCY 1 cut(s) 208
BstXI CCANNNNNNTGG 1 cut(s) 52
BstYI RGATCY 1 cut(s) 208
BstZI CGGCCG 1 cut(s) 1094
Bsu36I CCTNAGG 1 cut(s) 1232
BsuRI GGCC 3 cut(s) 62, 1096, 1453
BtsCI GGATG 2 cut(s) 894, 1483
BtsIMutI CAGTG 1 cut(s) 1210
BtuMI TCGCGA 1 cut(s) 284
BveI ACCTGC 3 cut(s) 487, 619, 995
Cac8I GCNNGC 5 cut(s) 64, 192, 275, 703, 1455
CciI TCATGA 2 cut(s) 1059, 1222
CfoI GCGC 2 cut(s) 1342, 1582
Cfr10I RCCGGY 2 cut(s) 190, 1453
Csp6I GTAC 4 cut(s) 821, 925, 1022, 1257
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviQI GTAC 4 cut(s) 821, 925, 1022, 1257
DdeI CTNAG 6 cut(s) 579, 981, 1232, 1241, 1556, 1615
DraI TTTAAA 1 cut(s) 1425
EaeI YGGCCR 1 cut(s) 1094
EagI CGGCCG 1 cut(s) 1094
Eam1104I CTCTTC 2 cut(s) 1263, 1635
EarI CTCTTC 2 cut(s) 1263, 1635
EciI GGCGGA 2 cut(s) 221, 481
EclXI CGGCCG 1 cut(s) 1094
Eco130I CCWWGG 1 cut(s) 872
Eco32I GATATC 1 cut(s) 761
Eco52I CGGCCG 1 cut(s) 1094
Eco57I CTGAAG 1 cut(s) 1287
Eco81I CCTNAGG 1 cut(s) 1232
Eco88I CYCGRG 2 cut(s) 167, 717
Eco91I GGTNACC 1 cut(s) 797
EcoO65I GGTNACC 1 cut(s) 797
EcoRI GAATTC 1 cut(s) 143
EcoRII CCWGG 1 cut(s) 851
EcoRV GATATC 1 cut(s) 761
EcoT14I CCWWGG 1 cut(s) 872
ErhI CCWWGG 1 cut(s) 872
Esp3I CGTCTC 1 cut(s) 1434
FalI AAGNNNNNCTT 2 cut(s) 1310, 1342
FaqI GGGAC 1 cut(s) 568
FauI CCCGC 1 cut(s) 170
FbaI TGATCA 1 cut(s) 844
Fnu4HI GCNGC 5 cut(s) 77, 699, 1068, 1094, 1150
FokI GGATG 2 cut(s) 901, 1490
Fsp4HI GCNGC 5 cut(s) 77, 699, 1068, 1094, 1150
FspBI CTAG 2 cut(s) 414, 990
GlaI GCGC 2 cut(s) 1341, 1581
GluI GCNGC 5 cut(s) 77, 699, 1068, 1094, 1150
GsuI CTGGAG 1 cut(s) 1186
HaeIII GGCC 3 cut(s) 62, 1096, 1453
HapII CCGG 5 cut(s) 191, 734, 1366, 1454, 1463
HhaI GCGC 2 cut(s) 1342, 1582
Hin6I GCGC 2 cut(s) 1340, 1580
HinP1I GCGC 2 cut(s) 1340, 1580
HincII GTYRAC 1 cut(s) 1294
HindII GTYRAC 1 cut(s) 1294
HinfI GANTC 6 cut(s) 31, 581, 590, 1192, 1199, 1245
HpaII CCGG 5 cut(s) 191, 734, 1366, 1454, 1463
HphI GGTGA 5 cut(s) 61, 109, 268, 643, 1581
Hpy166II GTNNAC 7 cut(s) 124, 183, 247, 838, 894, 1010, 1294
Hpy188I TCNGA 8 cut(s) 36, 91, 580, 620, 984, 1267, 1393, 1618
Hpy188III TCNNGA 8 cut(s) 217, 283, 734, 1060, 1196, 1223, 1231, 1348
Hpy8I GTNNAC 7 cut(s) 124, 183, 247, 838, 894, 1010, 1294
Hpy99I CGWCG 4 cut(s) 131, 202, 205, 1166
HpyAV CCTTC 4 cut(s) 15, 233, 355, 938
HpyCH4III ACNGT 2 cut(s) 121, 187
HpyCH4IV ACGT 1 cut(s) 1443
HpyCH4V TGCA 9 cut(s) 423, 575, 628, 653, 785, 838, 1010, 1280, 1379
HpyF10VI GCNNNNNNNGC 4 cut(s) 63, 230, 388, 488
HpyF3I CTNAG 6 cut(s) 579, 981, 1232, 1241, 1556, 1615
HpySE526I ACGT 1 cut(s) 1443
HspAI GCGC 2 cut(s) 1340, 1580
Kpn2I TCCGGA 1 cut(s) 733
KroI GCCGGC 2 cut(s) 190, 1453
KroNI GCCGGC 2 cut(s) 192, 1455
Ksp22I TGATCA 1 cut(s) 844
LmnI GCTCC 2 cut(s) 84, 487
Lsp1109I GCAGC 3 cut(s) 685, 1079, 1161
LweI GCATC 2 cut(s) 584, 1498
MaeI CTAG 2 cut(s) 414, 990
MaeII ACGT 1 cut(s) 1443
MaeIII GTNAC 3 cut(s) 115, 797, 1213
MbiI CCGCTC 1 cut(s) 79
MboII GAAGA 6 cut(s) 271, 295, 768, 1280, 1631, 1652
MfeI CAATTG 1 cut(s) 501
MflI RGATCY 1 cut(s) 208
MhlI GDGCHC 4 cut(s) 726, 840, 861, 1012
MlyI GAGTC 4 cut(s) 25, 590, 1193, 1239
MmeI TCCRAC 3 cut(s) 586, 832, 1617
MroI TCCGGA 1 cut(s) 733
MroNI GCCGGC 2 cut(s) 190, 1453
MseI TTAA 6 cut(s) 642, 1049, 1136, 1317, 1424, 1602
MslI CAYNNNNRTG 1 cut(s) 50
MspA1I CMGCKG 1 cut(s) 1070
MspI CCGG 5 cut(s) 191, 734, 1366, 1454, 1463
MspR9I CCNGG 2 cut(s) 853, 1463
MunI CAATTG 1 cut(s) 501
Mva1269I GAATGC 2 cut(s) 785, 1280
MvaI CCWGG 1 cut(s) 853
MvnI CGCG 2 cut(s) 224, 284
MwoI GCNNNNNNNGC 4 cut(s) 63, 230, 388, 488
NaeI GCCGGC 2 cut(s) 192, 1455
NciI CCSGG 1 cut(s) 1463
NgoMIV GCCGGC 2 cut(s) 190, 1453
NlaIV GGNNCC 3 cut(s) 189, 210, 610
NmuCI GTSAC 1 cut(s) 115
NruI TCGCGA 1 cut(s) 284
NspI RCATGY 1 cut(s) 1346
PaeR7I CTCGAG 1 cut(s) 717
PagI TCATGA 2 cut(s) 1059, 1222
PaqCI CACCTGC 2 cut(s) 619, 995
PcsI WCGNNNNNNNCGW 1 cut(s) 209
PctI GAATGC 2 cut(s) 785, 1280
PdiI GCCGGC 2 cut(s) 192, 1455
PfeI GAWTC 2 cut(s) 590, 1192
PfoI TCCNGGA 1 cut(s) 1461
PkrI GCNGC 5 cut(s) 78, 700, 1069, 1095, 1151
Ple19I CGATCG 1 cut(s) 282
PleI GAGTC 4 cut(s) 25, 589, 1193, 1239
PpsI GAGTC 4 cut(s) 25, 589, 1193, 1239
Psp6I CCWGG 1 cut(s) 851
PspEI GGTNACC 1 cut(s) 797
PspGI CCWGG 1 cut(s) 851
PspN4I GGNNCC 3 cut(s) 189, 210, 610
PspXI VCTCGAGB 1 cut(s) 717
PsuI RGATCY 1 cut(s) 208
PvuI CGATCG 1 cut(s) 282
PvuII CAGCTG 1 cut(s) 1070
RruI TCGCGA 1 cut(s) 284
RsaI GTAC 4 cut(s) 822, 926, 1023, 1258
RsaNI GTAC 4 cut(s) 821, 925, 1022, 1257
RseI CAYNNNNRTG 1 cut(s) 50
SaqAI TTAA 6 cut(s) 642, 1049, 1136, 1317, 1424, 1602
SatI GCNGC 5 cut(s) 77, 699, 1068, 1094, 1150
SchI GAGTC 4 cut(s) 25, 590, 1193, 1239
ScrFI CCNGG 2 cut(s) 853, 1463
SduI GDGCHC 4 cut(s) 726, 840, 861, 1012
SfaNI GCATC 2 cut(s) 584, 1498
Sfr274I CTCGAG 1 cut(s) 717
SlaI CTCGAG 1 cut(s) 717
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 2 cut(s) 717, 1247
SmoI CTYRAG 2 cut(s) 717, 1247
SpeI ACTAGT 1 cut(s) 989
SsiI CCGC 9 cut(s) 48, 77, 148, 177, 206, 233, 391, 466, 1093
SspMI CTAG 2 cut(s) 414, 990
StyD4I CCNGG 2 cut(s) 851, 1461
StyI CCWWGG 1 cut(s) 872
TaaI ACNGT 2 cut(s) 121, 187
TaiI ACGT 1 cut(s) 1446
TaqI TCGA 5 cut(s) 159, 197, 718, 1164, 1303
TatI WGTACW 1 cut(s) 1021
TauI GCSGC 2 cut(s) 79, 1096
TfiI GAWTC 2 cut(s) 590, 1192
Tru1I TTAA 6 cut(s) 642, 1049, 1136, 1317, 1424, 1602
Tru9I TTAA 6 cut(s) 642, 1049, 1136, 1317, 1424, 1602
TscAI CASTG 1 cut(s) 1210
TseFI GTSAC 1 cut(s) 115
TseI GCWGC 3 cut(s) 698, 1067, 1149
Tsp45I GTSAC 1 cut(s) 115
TspDTI ATGAA 5 cut(s) 759, 778, 1076, 1205, 1273
TspGWI ACGGA 2 cut(s) 201, 768
TspRI CASTG 1 cut(s) 1210
VneI GTGCAC 2 cut(s) 836, 1008
XapI RAATTY 2 cut(s) 143, 1541
XceI RCATGY 1 cut(s) 1346
XcmI CCANNNNNNNNNTGG 1 cut(s) 49
XhoI CTCGAG 1 cut(s) 717
XspI CTAG 2 cut(s) 414, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.