Rorug01G0221000

Acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
31655583 .. 31663508
7926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0221000.1

Sequence Viewer

Length: 3573 bp
ATGGCTGTTGTGAGAGCAGCTTTTCATAGAACTTCCGCTTCCAATACTACATCTCCTTTTCCCAGTAGGTATCATGTGTTCTTGAGTTTCAGAGGCCAAGATACTCGCAAAACTTTTACCGACCACCTCCATACAGCTTTCAAGGACCAAGGCTTTCGCACCTTTCTAGATGACGATGAACTTGAGAGAGGAGAAGATATTAACCCGGGACTTGGGAAAGCCATTCGAGACTCGCGAAGTTCTGTCATTGTGTTCTCAAAAGATTACGCTTCTTCCCGGTGGTGCCTTAACGAGCTGGTGATGATCCTTGAACGCAAGAGGACCTCAGATCATGTTGTTTTACCAGTCTTCTACAACGTGGAACCATCCGACGTGAGGAAGCAGACGGGAAGTTTTGGGGAATCGTTTGCTAGACACCAAAAGACTCAACCGCCACACAAGGTGCAGGAATGGAGGGACGCACTTAAAAAAGTTGCAGATCTAGCTGGGATGGTCTTACAGAAACAAACGAATGGGTATGAGGCAACGTTTATTAAAAAAGTTGTTAAAGTGATCGGAGACAAGATAAGTCGCACACCATTAAGCGTTGCTCACAACATAATTGGAATAGAGTCTCGAGTTGAAAGCATTAATTTATGGTTACAAGATCGGTCAACTGATGTTGGCATGCTTTTAATCTATGGCATGTCTGGAATTGGGAAGACAACCATTGCAAAATCTGTTTATAATTTAAACTTTCGTAGGTTTGAAGGAAGTAGCTTCATTGAAAGTATCAGAAAAATTTCAGAAGAGCCCAAGGGGTTAGTTGGGATACAATCACAGCTCATTTCCGATATTATGAATGGAAGAGAAGTGAAAATACACAACGTTAGTGAGGGTACCATCATGGTTGGAGATGTCATAAGCTCTAAAAAGATTCTTCTTGTTCTTGATGATGTGGATCATATGGATCAATTAGATGCGGTTCTTAGAATGCAAGATCAGTTCCATCCAGGAAGTAAGATCATCATAACAACTCGGTACAAAAGCTTGTTAAAGGCTCACCACCCTACTAAGTTGCATTGTGTAGAAACTTTGGATTACAATGAATCATTAGAGTTGTTCAGTTGGCATGCTTTTGGACAAGACCATCCCATTGAAGGTTATATGGAACTTTCAGAAAAGGTAGTACGTCATGCGGGAGGACTTCCGTTAGCTCTTCAAGTTTTGGGTGCTTCTTTGTCGGGGAAAATTATAGAAGTTTGGGAAAGTGCATTAGATAAATTACAAGCTATTCCCCATAGAGAAATCGTGCAGAAACTGAAAATAAGCTATGACTCTTTACAAGATGACCATGATCAAGAATTACTCCTCCATATTGCTTGCTTCTTAAGTGGAAAAGACAAAGATGCCATTGTGAGGATACTAGATGGATGTGATTTCTACACAATTGTTGGCATTCAGAATCTCATTGAAAGATGTTTATTAACAATTGACAAACACGACAAGGTGCAGATGCATGACATGATTCGTGACATGGGAAGAGAAATTGTTCGTCGAGAATCAAAAGAGCCCGAGAAACGTAGCAGACTATGGCATCATAAGGATTCTCTCAGAGTGTTGAGAGAAAAGAATGGTACACAAACGATTGAGGGTCTTGTCCTGAACATGCATATGCACACTGCAGACACTCCATCAAAGATCCTCTTCGAAACCCATGCCTTCACAAGGATGTACAAACTAAGACTACTCCATCTTATTCGGGTACGACTCGATGGTTGTTTCGACGAATTCCCAACAGGACTGATATGGTTATGTTGGAATGAATTTCCTTTGGATTCAATACCAATTGATTTTTCTCTAGAGAGTCTGGTTGTTCTTGAAATGCAGCATAGTAACTTGAGACAAGTCTGGAAGGGAACTAAATGTCTTCCATCATTGAAGATCCTTGATCTCAGCTTCTCTCATGGCCTTACCGAAACAGCCGATTTTTCGCTTTGCCCCAATATAGAGAAACTAATTCTCATAGATTGCCGAAGCTTGGTTGATGTCAGTTCCATCGGAAACGTAAAGAGACTTGTTTACTTGAATATGAGAGACTGCAAAAATCTCCGGATGCTCCCGGCAAACATTTTTGTCCATTTAGAAATACTTGAAACACTCATCATATCTGGATGCTCAAATCTGAATGAGTTTCCAGTGGAGATGATGAGGAACATGGAATGTTTGAAAGTGCTTGAAACAGATGGAATTCCAATAGATCATATACTGGCTACTGGAAAAAGTCCCCTTAGTTTTTGGACCTCTTTACCACCCACTTTAGTAGCTTTAAGTCTTCGTGGATGCAATCTCTTCGATGATTCGTTTCCTATGGATTTTGGTGGCCTGTCCTCATTGCAAAGATTAGATCTAGGTGAAAATCCAATATGTAGCCTACCAAATTGCGTCAAAGGACTTACTGACCTCAAAGAACTCACCTTTTATGATTGCTCGAGACTCCAATCTCTTGTAGAGCTACCAAAACTAGATCGTGATTTGAACGTAGAAGGTTGCCTTGCATTGGAAAGGATAACATTTAAATCAGTTAGGAGCCAAGCAAAAGTGACCTCAGTGCGTGCCAACAACAGCCTGGTGGAGGTTGAGTACAACTTCAGGCTAGTTCCCATTGTTAGAGTTGATGTAGAAATGCTCAACCTCTTGGCCTTATTCAACTTGGACTTGGAATCCATGTCAACCATTCGGATACACAACCCTTGTGCAGCTCCCTGGCAATATCAGAGTCGTATCCAGGGTATGTATCAATATGGTATATTCAGCATATATCTTCCTGGGAATGAGGTTCCGGGACAGTTCAGCCACAGAAGAAGAGAAGGGTCATCCTCGATATCAATTACTGTTCCCTTGCCTCTACTTCCTGATCTCAGAATTCGAGGGTTGAACATCTTCATAGTCTATGCAAATGCCGACGGTGAATACTACGCTGGTGATTATTCACCTGATGTGACGATCATTAAAGTCAGAAACAAGAGCAAAGGTTTGAAGTGGATGTATGGCGCAACAATTTACGGCATTCCAGCTGAGGGAGAAGACATGATGTGGTTAAGCCATTGGAATATGGAGAATCAAATACAAGGTGGGGATCAAGTGATTGTTTCGGTATTTCTACGACAACCCGATTGGTTTAAGATTAAGGAGTGGGGGATCCAGGTTGTGGAGGAAGACCTAGACCAACCCAACAACGCCAAAGATCCTCATTATCCACGTGTCATTGGTGGAGATTTGTCAAGACATGAGGTGATGCCAGGAACATACTTGCTGTGCTCTTCAATTGACGAACCGGATGAACTGGAAGAAATCGTTTCGGGTAGGGCGACTTGGTTCAATAACCTCAATAGGGACTCTGATGATGAAGATACAGACAGAGAAGAAGAGCAACAGAAGGTGGAAGGTGATCATGATCACAGTCTTTCAGCAAAGAGAGGATGGAAGATGTGCTCGATAATAATGGCTGCTGGTTTGTTTCTCTCCCTTCCTCTATTGGGTCGTTCTTCTCTGTCTCGCCGAAATAAGAGACAGTCCACAAGCCCTCCATGA

Protein Analysis

1190

Amino Acids

135.36

Weight (kDa)

6.14

Isoelectric Point (pI)

47.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 24 - 193 4.1e-51 TIR domain
TIR_2 PF13676 26 - 122 7e-16 TIR domain
NB-ARC PF00931 204 - 374 8.3e-19 NB-ARC domain
WHD_ROQ1 PF23282 444 - 515 9.5e-19 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 726
Acc65I GGTACC 1 cut(s) 878
AccB1I GGYRCC 2 cut(s) 282, 878
AccB7I CCANNNNNTGG 1 cut(s) 3190
AccII CGCG 1 cut(s) 235
AccIII TCCGGA 1 cut(s) 2091
AciI CCGC 4 cut(s) 36, 431, 962, 1178
AclI AACGTT 2 cut(s) 527, 867
AclWI GGATC 9 cut(s) 298, 948, 957, 1675, 1918, 3126, 3175, 3188, 3221
AcsI RAATTY 5 cut(s) 780, 1769, 1805, 2229, 2904
AcuI CTGAAG 1 cut(s) 2614
AcvI CACGTG 1 cut(s) 3242
AdeI CACNNNGTG 1 cut(s) 442
AfaI GTAC 7 cut(s) 880, 1022, 1170, 1618, 1715, 1746, 2624
AflII CTTAAG 1 cut(s) 1369
AflIII ACRYGT 1 cut(s) 3241
AjiI CACGTC 1 cut(s) 373
AjnI CCWGG 7 cut(s) 991, 2607, 2744, 2766, 2806, 3183, 3280
AjuI GAANNNNNNNTTGG 2 cut(s) 1819, 1851
Alw21I GWGCWC 2 cut(s) 3302, 3476
Alw26I GTCTC 9 cut(s) 222, 552, 618, 1876, 2047, 2070, 2467, 3540, 3544
AlwI GGATC 9 cut(s) 298, 948, 957, 1675, 1918, 3126, 3175, 3188, 3221
AlwNI CAGNNNCTG 1 cut(s) 1300
Ama87I CYCGRG 4 cut(s) 205, 615, 1553, 2470
Aor13HI TCCGGA 1 cut(s) 2091
AoxI GGCC 4 cut(s) 94, 1948, 2362, 2679
ApeKI GCWGC 4 cut(s) 17, 1867, 2738, 3488
ApoI RAATTY 5 cut(s) 780, 1769, 1805, 2229, 2904
AseI ATTAAT 1 cut(s) 630
Asp700I GAANNNNTTC 3 cut(s) 781, 1530, 2921
Asp718I GGTACC 1 cut(s) 878
AspLEI GCGC 1 cut(s) 3035
AspS9I GGNCC 3 cut(s) 145, 321, 2280
AsuC2I CCSGG 5 cut(s) 206, 207, 277, 2102, 2823
AsuHPI GGTGA 9 cut(s) 310, 1034, 2405, 2446, 2960, 2964, 2975, 3286, 3440
AsuII TTCGAA 1 cut(s) 1689
AvaI CYCGRG 4 cut(s) 205, 615, 1553, 2470
AvaII GGWCC 3 cut(s) 145, 321, 2280
BamHI GGATCC 1 cut(s) 3180
BanI GGYRCC 2 cut(s) 282, 878
BanII GRGCYC 2 cut(s) 795, 1554
BarI GAAGNNNNNNTAC 2 cut(s) 843, 875
BbrPI CACGTG 1 cut(s) 3242
BbsI GAAGAC 6 cut(s) 340, 707, 1901, 2306, 3072, 3204
Bbv12I GWGCWC 2 cut(s) 3302, 3476
BbvCI CCTCAGC 1 cut(s) 3057
BbvI GCAGC 4 cut(s) 29, 1879, 2750, 3475
BceAI ACGGC 1 cut(s) 3061
BcgI CGANNNNNNTGC 4 cut(s) 1679, 1713, 2314, 2348
BciT130I CCWGG 7 cut(s) 993, 2609, 2746, 2768, 2808, 3185, 3282
BciVI GTATCC 4 cut(s) 804, 1395, 2715, 2774
BclI TGATCA 3 cut(s) 1336, 3430, 3436
BcnI CCSGG 5 cut(s) 206, 207, 277, 2102, 2823
BcoDI GTCTC 9 cut(s) 222, 552, 618, 1876, 2047, 2070, 2467, 3540, 3544
BfaI CTAG 9 cut(s) 167, 411, 482, 1406, 1841, 2390, 2504, 2636, 3203
BfmI CTRYAG 1 cut(s) 1662
BfrI CTTAAG 1 cut(s) 1369
BfuI GTATCC 4 cut(s) 804, 1395, 2715, 2774
BglII AGATCT 2 cut(s) 478, 2386
BisI GCNGC 4 cut(s) 18, 1868, 2739, 3489
BlsI GCNGC 4 cut(s) 19, 1869, 2740, 3490
Bme18I GGWCC 3 cut(s) 145, 321, 2280
BmeT110I CYCGRG 4 cut(s) 205, 615, 1553, 2470
BmgBI CACGTC 1 cut(s) 373
BmgT120I GGNCC 3 cut(s) 145, 321, 2280
BmiI GGNNCC 6 cut(s) 284, 363, 880, 2570, 2820, 3182
BmrI ACTGGG 1 cut(s) 57
BmsI GCATC 8 cut(s) 949, 1378, 1485, 1585, 2085, 2144, 2312, 3267
BmuI ACTGGG 1 cut(s) 57
BpiI GAAGAC 6 cut(s) 340, 707, 1901, 2306, 3072, 3204
Bpu10I CCTNAGC 1 cut(s) 3057
Bpu14I TTCGAA 1 cut(s) 1689
BpuEI CTTGAG 3 cut(s) 103, 203, 1900
BpuMI CCSGG 5 cut(s) 206, 207, 277, 2102, 2823
BsaAI YACGTR 1 cut(s) 3242
BsaBI GATNNNNATC 2 cut(s) 939, 3435
BsaJI CCNNGG 6 cut(s) 148, 205, 795, 2744, 2767, 2807
BsaWI WCCGGW 2 cut(s) 2091, 3316
BsaXI ACNNNNNCTCC 5 cut(s) 37, 67, 2606, 2636, 3550
Bse1I ACTGG 6 cut(s) 63, 344, 2177, 2253, 2260, 3330
Bse3DI GCAATG 2 cut(s) 708, 2372
Bse8I GATNNNNATC 2 cut(s) 939, 3435
BseAI TCCGGA 1 cut(s) 2091
BseBI CCWGG 7 cut(s) 993, 2609, 2746, 2768, 2808, 3185, 3282
BseDI CCNNGG 6 cut(s) 148, 205, 795, 2744, 2767, 2807
BseJI GATNNNNATC 2 cut(s) 939, 3435
BseMI GCAATG 2 cut(s) 708, 2372
BseMII CTCAG 6 cut(s) 339, 1606, 1948, 2601, 2914, 3048
BseNI ACTGG 6 cut(s) 63, 344, 2177, 2253, 2260, 3330
BseRI GAGGAG 2 cut(s) 204, 1340
BseXI GCAGC 4 cut(s) 29, 1879, 2750, 3475
BseYI CCCAGC 1 cut(s) 485
BsgI GTGCAG 4 cut(s) 464, 1313, 1511, 2757
Bsh1236I CGCG 1 cut(s) 235
BshFI GGCC 4 cut(s) 96, 1950, 2364, 2681
BshNI GGYRCC 2 cut(s) 282, 878
BsiHKAI GWGCWC 2 cut(s) 3302, 3476
BsiHKCI CYCGRG 4 cut(s) 205, 615, 1553, 2470
BsiSI CCGG 6 cut(s) 206, 277, 2092, 2102, 2822, 3317
BslFI GGGAC 5 cut(s) 222, 470, 2250, 2838, 3389
BsmAI GTCTC 9 cut(s) 222, 552, 618, 1876, 2047, 2070, 2467, 3540, 3544
BsmFI GGGAC 5 cut(s) 222, 470, 2250, 2838, 3389
BsmI GAATGC 3 cut(s) 978, 1437, 3048
BsnI GGCC 4 cut(s) 96, 1950, 2364, 2681
BsoBI CYCGRG 4 cut(s) 205, 615, 1553, 2470
Bsp119I TTCGAA 1 cut(s) 1689
Bsp1286I GDGCHC 4 cut(s) 795, 1554, 3302, 3476
Bsp13I TCCGGA 1 cut(s) 2091
Bsp1407I TGTACA 1 cut(s) 1713
Bsp68I TCGCGA 1 cut(s) 235
BspACI CCGC 4 cut(s) 36, 431, 962, 1178
BspANI GGCC 4 cut(s) 96, 1950, 2364, 2681
BspCNI CTCAG 6 cut(s) 338, 1605, 1947, 2600, 2913, 3049
BspEI TCCGGA 1 cut(s) 2091
BspFNI CGCG 1 cut(s) 235
BspHI TCATGA 1 cut(s) 3433
BspLI GGNNCC 6 cut(s) 284, 363, 880, 2570, 2820, 3182
BspMAI CTGCAG 1 cut(s) 1666
BspPI GGATC 9 cut(s) 298, 948, 957, 1675, 1918, 3126, 3175, 3188, 3221
BspQI GCTCTTC 4 cut(s) 783, 1203, 3307, 3402
BspT104I TTCGAA 1 cut(s) 1689
BspT107I GGYRCC 2 cut(s) 282, 878
BspTI CTTAAG 1 cut(s) 1369
BsrDI GCAATG 2 cut(s) 708, 2372
BsrGI TGTACA 1 cut(s) 1713
BsrI ACTGG 6 cut(s) 63, 344, 2177, 2253, 2260, 3330
BssECI CCNNGG 6 cut(s) 148, 205, 795, 2744, 2767, 2807
BssT1I CCWWGG 2 cut(s) 148, 795
Bst2UI CCWGG 7 cut(s) 993, 2609, 2746, 2768, 2808, 3185, 3282
Bst4CI ACNGT 5 cut(s) 2829, 2875, 2948, 3443, 3555
Bst6I CTCTTC 9 cut(s) 783, 841, 1203, 1516, 1691, 2336, 2839, 3307, 3402
BstAFI CTTAAG 1 cut(s) 1369
BstAUI TGTACA 1 cut(s) 1713
BstBAI YACGTR 1 cut(s) 3242
BstBI TTCGAA 1 cut(s) 1689
BstC8I GCNNGC 4 cut(s) 668, 1113, 1363, 2595
BstENI CCTNNNNNAGG 2 cut(s) 1705, 2612
BstFNI CGCG 1 cut(s) 235
BstHHI GCGC 1 cut(s) 3035
BstMAI GTCTC 9 cut(s) 222, 552, 618, 1876, 2047, 2070, 2467, 3540, 3544
BstMWI GCNNNNNNNGC 1 cut(s) 482
BstNI CCWGG 7 cut(s) 993, 2609, 2746, 2768, 2808, 3185, 3282
BstNSI RCATGY 4 cut(s) 670, 688, 1115, 1651
BstSFI CTRYAG 1 cut(s) 1662
BstUI CGCG 1 cut(s) 235
BstV1I GCAGC 4 cut(s) 29, 1879, 2750, 3475
BstV2I GAAGAC 6 cut(s) 340, 707, 1901, 2306, 3072, 3204
BstX2I RGATCY 6 cut(s) 478, 1680, 1923, 2386, 3180, 3226
BstYI RGATCY 6 cut(s) 478, 1680, 1923, 2386, 3180, 3226
BsuI GTATCC 4 cut(s) 804, 1395, 2715, 2774
BsuRI GGCC 4 cut(s) 96, 1950, 2364, 2681
BtrI CACGTC 1 cut(s) 373
BtsI GCAGTG 1 cut(s) 1659
BtsIMutI CAGTG 3 cut(s) 1659, 2184, 2595
BtuMI TCGCGA 1 cut(s) 235
Cac8I GCNNGC 4 cut(s) 668, 1113, 1363, 2595
CaiI CAGNNNCTG 1 cut(s) 1300
CciI TCATGA 1 cut(s) 3433
CfoI GCGC 1 cut(s) 3035
Cfr13I GGNCC 3 cut(s) 145, 321, 2280
Cfr9I CCCGGG 1 cut(s) 205
CseI GACGC 2 cut(s) 467, 2413
Csp6I GTAC 7 cut(s) 879, 1021, 1169, 1617, 1714, 1745, 2623
CviQI GTAC 7 cut(s) 879, 1021, 1169, 1617, 1714, 1745, 2623
DraI TTTAAA 2 cut(s) 732, 2557
DraIII CACNNNGTG 1 cut(s) 442
Eam1104I CTCTTC 9 cut(s) 783, 841, 1203, 1516, 1691, 2336, 2839, 3307, 3402
EarI CTCTTC 9 cut(s) 783, 841, 1203, 1516, 1691, 2336, 2839, 3307, 3402
Eco130I CCWWGG 2 cut(s) 148, 795
Eco24I GRGCYC 2 cut(s) 795, 1554
Eco32I GATATC 1 cut(s) 2865
Eco47I GGWCC 3 cut(s) 145, 321, 2280
Eco57I CTGAAG 1 cut(s) 2614
Eco72I CACGTG 1 cut(s) 3242
Eco88I CYCGRG 4 cut(s) 205, 615, 1553, 2470
EcoNI CCTNNNNNAGG 2 cut(s) 1705, 2612
EcoO109I RGGNCCY 1 cut(s) 321
EcoRI GAATTC 3 cut(s) 1769, 2229, 2904
EcoRII CCWGG 7 cut(s) 991, 2607, 2744, 2766, 2806, 3183, 3280
EcoRV GATATC 1 cut(s) 2865
EcoT14I CCWWGG 2 cut(s) 148, 795
EcoT22I ATGCAT 2 cut(s) 1500, 1653
EcoT38I GRGCYC 2 cut(s) 795, 1554
ErhI CCWWGG 2 cut(s) 148, 795
FalI AAGNNNNNCTT 4 cut(s) 1670, 1702, 2517, 2549
FaqI GGGAC 5 cut(s) 222, 470, 2250, 2838, 3389
FauI CCCGC 1 cut(s) 1171
FauNDI CATATG 2 cut(s) 945, 1653
FbaI TGATCA 3 cut(s) 1336, 3430, 3436
Fnu4HI GCNGC 4 cut(s) 18, 1868, 2739, 3489
FriOI GRGCYC 2 cut(s) 795, 1554
Fsp4HI GCNGC 4 cut(s) 18, 1868, 2739, 3489
FspBI CTAG 9 cut(s) 167, 411, 482, 1406, 1841, 2390, 2504, 2636, 3203
GlaI GCGC 1 cut(s) 3034
GluI GCNGC 4 cut(s) 18, 1868, 2739, 3489
GsaI CCCAGC 1 cut(s) 489
HaeIII GGCC 4 cut(s) 96, 1950, 2364, 2681
HapII CCGG 6 cut(s) 206, 277, 2092, 2102, 2822, 3317
HgaI GACGC 2 cut(s) 467, 2413
HhaI GCGC 1 cut(s) 3035
Hin6I GCGC 1 cut(s) 3033
HinP1I GCGC 1 cut(s) 3033
HincII GTYRAC 2 cut(s) 654, 2712
HindII GTYRAC 2 cut(s) 654, 2712
HindIII AAGCTT 2 cut(s) 1027, 2017
HpaII CCGG 6 cut(s) 206, 277, 2092, 2102, 2822, 3317
HphI GGTGA 9 cut(s) 310, 1034, 2405, 2446, 2960, 2964, 2975, 3286, 3440
Hpy166II GTNNAC 5 cut(s) 654, 1619, 2062, 2712, 3558
Hpy8I GTNNAC 5 cut(s) 654, 1619, 2062, 2712, 3558
Hpy99I CGWCG 4 cut(s) 374, 1539, 1769, 2948
HpyAV CCTTC 9 cut(s) 743, 1133, 1711, 1888, 2519, 2843, 3412, 3419, 3518
HpyCH4III ACNGT 5 cut(s) 2829, 2875, 2948, 3443, 3555
HpyCH4IV ACGT 9 cut(s) 357, 372, 527, 867, 1171, 1561, 2046, 2520, 3241
HpyF10VI GCNNNNNNNGC 1 cut(s) 482
HpySE526I ACGT 9 cut(s) 357, 372, 527, 867, 1171, 1561, 2046, 2520, 3241
HspAI GCGC 1 cut(s) 3033
Kpn2I TCCGGA 1 cut(s) 2091
KpnI GGTACC 1 cut(s) 882
Ksp22I TGATCA 3 cut(s) 1336, 3430, 3436
LguI GCTCTTC 4 cut(s) 783, 1203, 3307, 3402
LmnI GCTCC 3 cut(s) 2103, 2568, 2746
Lsp1109I GCAGC 4 cut(s) 29, 1879, 2750, 3475
LweI GCATC 8 cut(s) 949, 1378, 1485, 1585, 2085, 2144, 2312, 3267
MaeI CTAG 9 cut(s) 167, 411, 482, 1406, 1841, 2390, 2504, 2636, 3203
MaeII ACGT 9 cut(s) 357, 372, 527, 867, 1171, 1561, 2046, 2520, 3241
MaeIII GTNAC 5 cut(s) 639, 1511, 1874, 2581, 2980
MfeI CAATTG 4 cut(s) 1428, 1470, 1827, 3306
MflI RGATCY 6 cut(s) 478, 1680, 1923, 2386, 3180, 3226
MhlI GDGCHC 4 cut(s) 795, 1554, 3302, 3476
MlyI GAGTC 9 cut(s) 224, 418, 620, 1310, 1743, 1855, 2469, 2767, 3371
MmeI TCCRAC 3 cut(s) 393, 871, 1778
Mph1103I ATGCAT 2 cut(s) 1500, 1653
MroI TCCGGA 1 cut(s) 2091
MroXI GAANNNNTTC 3 cut(s) 781, 1530, 2921
MslI CAYNNNNRTG 2 cut(s) 1652, 1709
MspA1I CMGCKG 1 cut(s) 3056
MspCI CTTAAG 1 cut(s) 1369
MspI CCGG 6 cut(s) 206, 277, 2092, 2102, 2822, 3317
MunI CAATTG 4 cut(s) 1428, 1470, 1827, 3306
Mva1269I GAATGC 3 cut(s) 978, 1437, 3048
MvaI CCWGG 7 cut(s) 993, 2609, 2746, 2768, 2808, 3185, 3282
MvnI CGCG 1 cut(s) 235
MwoI GCNNNNNNNGC 1 cut(s) 482
NciI CCSGG 5 cut(s) 206, 207, 277, 2102, 2823
NdeI CATATG 2 cut(s) 945, 1653
NlaIV GGNNCC 6 cut(s) 284, 363, 880, 2570, 2820, 3182
NmuCI GTSAC 3 cut(s) 1511, 2581, 2980
NruI TCGCGA 1 cut(s) 235
NsiI ATGCAT 2 cut(s) 1500, 1653
NspI RCATGY 4 cut(s) 670, 688, 1115, 1651
NspV TTCGAA 1 cut(s) 1689
PaeI GCATGC 2 cut(s) 670, 1115
PaeR7I CTCGAG 2 cut(s) 615, 2470
PagI TCATGA 1 cut(s) 3433
PciSI GCTCTTC 4 cut(s) 783, 1203, 3307, 3402
PcsI WCGNNNNNNNCGW 2 cut(s) 232, 3347
PctI GAATGC 3 cut(s) 978, 1437, 3048
PdmI GAANNNNTTC 3 cut(s) 781, 1530, 2921
PflMI CCANNNNNTGG 1 cut(s) 3190
PfoI TCCNGGA 2 cut(s) 991, 2821
PkrI GCNGC 4 cut(s) 19, 1869, 2740, 3490
PleI GAGTC 9 cut(s) 224, 418, 619, 1310, 1743, 1854, 2469, 2766, 3371
PmaCI CACGTG 1 cut(s) 3242
PmlI CACGTG 1 cut(s) 3242
PpsI GAGTC 9 cut(s) 224, 418, 619, 1310, 1743, 1854, 2469, 2766, 3371
Ppu21I YACGTR 1 cut(s) 3242
PpuMI RGGWCCY 1 cut(s) 321
PshBI ATTAAT 1 cut(s) 630
PsiI TTATAA 1 cut(s) 726
Psp1406I AACGTT 2 cut(s) 527, 867
Psp5II RGGWCCY 1 cut(s) 321
Psp6I CCWGG 7 cut(s) 991, 2607, 2744, 2766, 2806, 3183, 3280
PspCI CACGTG 1 cut(s) 3242
PspFI CCCAGC 1 cut(s) 485
PspGI CCWGG 7 cut(s) 991, 2607, 2744, 2766, 2806, 3183, 3280
PspN4I GGNNCC 6 cut(s) 284, 363, 880, 2570, 2820, 3182
PspPI GGNCC 3 cut(s) 145, 321, 2280
PspPPI RGGWCCY 1 cut(s) 321
PsrI GAACNNNNNNTAC 2 cut(s) 62, 94
PstI CTGCAG 1 cut(s) 1666
PstNI CAGNNNCTG 1 cut(s) 1300
PsuI RGATCY 6 cut(s) 478, 1680, 1923, 2386, 3180, 3226
PvuII CAGCTG 1 cut(s) 3056
RruI TCGCGA 1 cut(s) 235
RsaI GTAC 7 cut(s) 880, 1022, 1170, 1618, 1715, 1746, 2624
RsaNI GTAC 7 cut(s) 879, 1021, 1169, 1617, 1714, 1745, 2623
RseI CAYNNNNRTG 2 cut(s) 1652, 1709
SapI GCTCTTC 4 cut(s) 783, 1203, 3307, 3402
SatI GCNGC 4 cut(s) 18, 1868, 2739, 3489
Sau96I GGNCC 3 cut(s) 145, 321, 2280
SchI GAGTC 9 cut(s) 224, 418, 620, 1310, 1743, 1855, 2469, 2767, 3371
SduI GDGCHC 4 cut(s) 795, 1554, 3302, 3476
SfaNI GCATC 8 cut(s) 949, 1378, 1485, 1585, 2085, 2144, 2312, 3267
SfcI CTRYAG 1 cut(s) 1662
Sfr274I CTCGAG 2 cut(s) 615, 2470
SfuI TTCGAA 1 cut(s) 1689
SinI GGWCC 3 cut(s) 145, 321, 2280
SlaI CTCGAG 2 cut(s) 615, 2470
SmaI CCCGGG 1 cut(s) 207
SmiI ATTTAAAT 1 cut(s) 2557
SmiMI CAYNNNNRTG 2 cut(s) 1652, 1709
SmlI CTYRAG 6 cut(s) 82, 182, 615, 1369, 1879, 2470
SmoI CTYRAG 6 cut(s) 82, 182, 615, 1369, 1879, 2470
SphI GCATGC 2 cut(s) 670, 1115
SsiI CCGC 4 cut(s) 36, 431, 962, 1178
SspMI CTAG 9 cut(s) 167, 411, 482, 1406, 1841, 2390, 2504, 2636, 3203
StyI CCWWGG 2 cut(s) 148, 795
SwaI ATTTAAAT 1 cut(s) 2557
TaaI ACNGT 5 cut(s) 2829, 2875, 2948, 3443, 3555
TaiI ACGT 9 cut(s) 360, 375, 530, 870, 1174, 1564, 2049, 2523, 3244
TaqII GACCGA 1 cut(s) 639
TatI WGTACW 2 cut(s) 1713, 2622
TscAI CASTG 3 cut(s) 1666, 2184, 2595
TseFI GTSAC 3 cut(s) 1511, 2581, 2980
TseI GCWGC 4 cut(s) 17, 1867, 2738, 3488
Tsp45I GTSAC 3 cut(s) 1511, 2581, 2980
TspDTI ATGAA 9 cut(s) 14, 192, 751, 854, 1101, 1818, 2914, 3336, 3402
TspGWI ACGGA 1 cut(s) 1179
TspMI CCCGGG 1 cut(s) 205
TspRI CASTG 3 cut(s) 1666, 2184, 2595
Van91I CCANNNNNTGG 1 cut(s) 3190
Vha464I CTTAAG 1 cut(s) 1369
VpaK11BI GGWCC 3 cut(s) 145, 321, 2280
VspI ATTAAT 1 cut(s) 630
XagI CCTNNNNNAGG 2 cut(s) 1705, 2612
XapI RAATTY 5 cut(s) 780, 1769, 1805, 2229, 2904
XbaI TCTAGA 2 cut(s) 166, 1840
XceI RCATGY 4 cut(s) 670, 688, 1115, 1651
XcmI CCANNNNNNNNNTGG 1 cut(s) 2605
XhoI CTCGAG 2 cut(s) 615, 2470
XmaI CCCGGG 1 cut(s) 205
XmnI GAANNNNTTC 3 cut(s) 781, 1530, 2921
XspI CTAG 9 cut(s) 167, 411, 482, 1406, 1841, 2390, 2504, 2636, 3203
Zsp2I ATGCAT 2 cut(s) 1500, 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.