Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007995

Physical Location & Seq

Genomic Coordinates Reverse (-)

44967643 .. 44974686

Gene Structure 7044 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57749

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGTTTGTTTCCCACCACACACTGCCATATACATATTACAGACAGACAAGTCCAGAAGAGAAACACCCCAAAAAGTCACCTACCTTTTTTCATCTCTCCCCCCATTACCGTTCTACTTGTCTGTCAAGACTTCAATCTTTCTTCTCCCTTATATATCATTCCAATATGCCTTACACCCAAACAGTAACCACCACCACCACAATGGGCCAGGCCGGCCTCACCCTCACCGCGCCGCTCCTCTCTCCTCCGTCGCCCGATCAACCCCACTTGATCGTCACCGTCCACGACGACGACGACGACGACGGCGGCGGCGACGGCAACGGCAGCTTCCGCAACCCGTTTGCGTTTCTCGGGTCGGGCGGGTTTAAGGTGCCCGTATCGACGACGGCGGATCCGTTCAAGAACCAGACTTTGAAAATCGGAGGGGTTTACGAGTGGTTGAAGATCGGGGTTTGCTTCCCCATCGCGATTGTGAGGCTTGTGATCTTTGGGGTTTCGTTGCTGATTGGGTTTGTGGCCACCAAATTGGCTCTGTTGGGATGGAAGGAGAGGCAGAACCCTATGCCCAAGTGGAGGTGTAGGATTATGTGGATCACTAGGGTCTGTACCAGATGTATTCTCTTCGCCTTTGGTTACCATTGGATAAGACGGATAGGAAAACCTGCTCCAAGGGCAACCGCCCCAATTGTTGTATCTAACCATGTATCTTTTATAGAACCTATATTCTACTTTTATGAACTATTCCCTACAATTGTCGCATCTGAGTCCCATGATTCCCTACCTTTTGTTGGAACCATCATCAGAGCAATGCAGGTGATATATGTTAATAGGTTTTCACCATCATCAAGGAGGCAAGCTGTTACTGAAATAAAGAGAAAAGCTTCATGCGATAGATTTCCTCGAGTGCTCCTATTTCCTGAGGGAACCACAACCAACGGAAGATATCTTATTTCATTTGAACTTGGTGCATTCATCCCTGGTTACCCAATCCAACCAGTAATTGTACGCTATCCTCATGTGCACTTTGATCAGTCCTGGGGGCACATTTCTTTGCCAAGGCTCATGTTTCGAATGTTCACGCAATTTCACAATTTCATGGAGGTCGAGTACCTTCCTGTTGTTTCACCTCTTGATAACAAGAAAGAAAGTGCTTTCCACTTTGCTCAGAGGACTAGTCATGCTATGGCAGCTGCACTCAATGTTGTACAGACATCTCATTCTTTTGGAGACTTGATGCTTCTCATGAAAGCAGCTGATTCAAAATCGAAACAGGTGCGGCCCTCAGCTTACATGGTTGAAATGGCGAGTGTAAAATCTGTACTCAATATAAGCAGCACGGAAGCTGTTGACCTTTTGGATAGATTTCTTTCTATGAATCCAGACCCCAGTGGTCATGTTACCTATCATGATTTCTTGAGGGTTCTAAGACTCAAGGCCTGTACCTTTTCTGAAGAGATATTTGCATTCATCGATGTTGACAAAAATCGAGCCATCACATTTAAGCAGTTCTTATTTGGATCAGCGCATGTCTTGAAGCAAAGATTATTCCGGCAAGCCTGTGCATTAGCTTTTTCTGAATGTGTTTCTGAGGATAATATCTACATTTTAGAACAGCAATTTGGAGACACTATCAGGCCTGCAATCCCAGATTTGACTGAAAATGAGACCCGTGAGCTGTTCAATCTTTTTGATACTGATCTTGATGGGAGAATCAGCAAGGACGATTTTTTCACCTGTCTAAGAAGAAATCCACTGCTAATTGCCCTTTTCTCACCTTGCTTACTTAACAAGGACTTCTCAGAAGATGGTAGTAGGTTGGTGGAGGAGATTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006631 GO:0006644 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0050200 GO:0071617 GO:0071618 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 map00564 map00565 map01100

Pfam Domains

Protein Families

Acyltransferase EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8

Protein Analysis

611

Amino Acids

69.47

Weight (kDa)

8.63

Isoelectric Point (pI)

49.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	223 - 335	3.3e-14	Acyltransferase
EF-hand_7	PF13499	521 - 577	8.3e-06	EF-hand domain pair
EF-hand_8	PF13833	550 - 583	9.9e-08	EF-hand domain pair

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45670 AT2G45670
fragaria_vesca	FvH4_7g12710 FvH4_7g12710 FvH4_7g12710
malus_domestica	MD02G1197300.v1.1 MD07G1123700.v1.1 MD15G1322400.v1.1
prunus_persica	Prupe.2G151300_v2.0.a1 Prupe.2G151300_v2.0.a1 Prupe.2G151300_v2.0.a1
pyrus_communis	pycom02g16080 pycom07g11640
rosa_chinensis	RchiOBHm_Chr1g0351731
rosa_laevigata	RLG00000028387
rosa_multiflora	Rmu_sc0001183.1_g000001 Rmu_sc0001933.1_g000017
rosa_roxburghii	Rroxscaffold_4G00303590
rosa_rugosa	Rorug01G0221000
rosa_samantha	Rh1AG234900 Rh1BG205500 Rh1CG219600 Rh1DG232500
rosa_wichuraiana	Rw1G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	802
AasI	GACNNNNNNGTC	1 cut(s)	48
Acc36I	ACCTGC	2 cut(s)	670, 802
AccB1I	GGYRCC	1 cut(s)	370
AccBSI	CCGCTC	1 cut(s)	235
AccII	CGCG	2 cut(s)	230, 467
AciI	CCGC	9 cut(s)	228, 233, 306, 309, 331, 360, 389, 678, 1276
AclWI	GGATC	4 cut(s)	386, 399, 599, 1525
AcoI	YGGCCR	1 cut(s)	516
AcuI	CTGAAG	1 cut(s)	1470
AfaI	GTAC	6 cut(s)	607, 1005, 1109, 1206, 1320, 1441
AfiI	CCNNNNNNNGG	2 cut(s)	573, 788
AgsI	TTSAA	9 cut(s)	134, 400, 415, 442, 959, 1260, 1298, 1534, 1681
AhlI	ACTAGT	1 cut(s)	1172
AjnI	CCWGG	3 cut(s)	207, 976, 1034
AjuI	GAANNNNNNNTTGG	2 cut(s)	1602, 1634
AluBI	AGCT	9 cut(s)	327, 857, 881, 1190, 1253, 1286, 1343, 1568, 1675
AluI	AGCT	9 cut(s)	327, 857, 881, 1190, 1253, 1286, 1343, 1568, 1675
Alw21I	GWGCWC	2 cut(s)	909, 1023
Alw26I	GTCTC	3 cut(s)	1221, 1617, 1658
Alw44I	GTGCAC	1 cut(s)	1019
AlwI	GGATC	4 cut(s)	386, 399, 599, 1525
Ama87I	CYCGRG	2 cut(s)	350, 900
AoxI	GGCC	7 cut(s)	205, 210, 214, 516, 1277, 1434, 1634
ApaLI	GTGCAC	1 cut(s)	1019
ApeKI	GCWGC	5 cut(s)	324, 1187, 1190, 1250, 1332
Asp700I	GAANNNNTTC	1 cut(s)	880
AspLEI	GCGC	2 cut(s)	232, 1525
AspS9I	GGNCC	2 cut(s)	205, 1278
AsuHPI	GGTGA	9 cut(s)	69, 211, 217, 268, 826, 828, 1116, 1723, 1764
AsuII	TTCGAA	1 cut(s)	1069
AvaI	CYCGRG	2 cut(s)	350, 900
AxyI	CCTNAGG	1 cut(s)	918
BaeGI	GKGCMC	3 cut(s)	375, 1023, 1044
BalI	TGGCCA	1 cut(s)	518
BamHI	GGATCC	1 cut(s)	391
BanI	GGYRCC	1 cut(s)	370
Bbv12I	GWGCWC	2 cut(s)	909, 1023
BbvCI	CCTCAGC	1 cut(s)	1282
BbvI	GCAGC	5 cut(s)	336, 1177, 1199, 1262, 1344
BccI	CCATC	7 cut(s)	470, 534, 803, 847, 1499, 1697, 1799
BceAI	ACGGC	4 cut(s)	319, 331, 337, 402
BcgI	CGANNNNNNTGC	2 cut(s)	1255, 1289
BciT130I	CCWGG	3 cut(s)	209, 978, 1036
BclI	TGATCA	1 cut(s)	1027
BcoDI	GTCTC	3 cut(s)	1221, 1617, 1658
BcuI	ACTAGT	1 cut(s)	1172
BfaI	CTAG	2 cut(s)	597, 1173
BfuAI	ACCTGC	2 cut(s)	670, 802
BglI	GCCNNNNNGGC	1 cut(s)	213
BisI	GCNGC	9 cut(s)	233, 307, 310, 325, 1188, 1191, 1251, 1277, 1333
BlsI	GCNGC	9 cut(s)	234, 308, 311, 326, 1189, 1192, 1252, 1278, 1334
Bme1390I	CCNGG	3 cut(s)	209, 978, 1036
BmeT110I	CYCGRG	2 cut(s)	350, 900
BmgT120I	GGNCC	2 cut(s)	205, 1278
BmiI	GGNNCC	4 cut(s)	372, 393, 793, 925
BmrFI	CCNGG	3 cut(s)	209, 978, 1036
BmrI	ACTGGG	1 cut(s)	1380
BmsI	GCATC	2 cut(s)	767, 1224
BmuI	ACTGGG	1 cut(s)	1380
Bpu10I	CCTNAGC	1 cut(s)	1282
Bpu14I	TTCGAA	1 cut(s)	1069
BpuEI	CTTGAG	2 cut(s)	1415, 1435
Bsa29I	ATCGAT	1 cut(s)	1470
BsaBI	GATNNNNATC	1 cut(s)	1695
BsaI	GGTCTC	1 cut(s)	1658
BsaJI	CCNNGG	4 cut(s)	668, 976, 1035, 1055
BsaXI	ACNNNNNCTCC	3 cut(s)	1091, 1121, 1817
Bsc4I	CCNNNNNNNGG	2 cut(s)	573, 788
Bse118I	RCCGGY	1 cut(s)	212
Bse1I	ACTGG	2 cut(s)	995, 1386
Bse21I	CCTNAGG	1 cut(s)	918
Bse3DI	GCAATG	1 cut(s)	813
Bse8I	GATNNNNATC	1 cut(s)	1695
BseBI	CCWGG	3 cut(s)	209, 978, 1036
BseCI	ATCGAT	1 cut(s)	1470
BseDI	CCNNGG	4 cut(s)	668, 976, 1035, 1055
BseGI	GGATG	2 cut(s)	545, 972
BseJI	GATNNNNATC	1 cut(s)	1695
BseLI	CCNNNNNNNGG	2 cut(s)	573, 788
BseMI	GCAATG	1 cut(s)	813
BseMII	CTCAG	6 cut(s)	753, 909, 1178, 1296, 1578, 1812
BseNI	ACTGG	2 cut(s)	995, 1386
BseRI	GAGGAG	2 cut(s)	227, 234
BseSI	GKGCMC	3 cut(s)	375, 1023, 1044
BseXI	GCAGC	5 cut(s)	336, 1177, 1199, 1262, 1344
BsgI	GTGCAG	1 cut(s)	1176
Bsh1236I	CGCG	2 cut(s)	230, 467
BshFI	GGCC	7 cut(s)	207, 212, 216, 518, 1279, 1436, 1636
BshNI	GGYRCC	1 cut(s)	370
BshVI	ATCGAT	1 cut(s)	1470
BsiHKAI	GWGCWC	2 cut(s)	909, 1023
BsiHKCI	CYCGRG	2 cut(s)	350, 900
BsiSI	CCGG	2 cut(s)	213, 1549
BslFI	GGGAC	1 cut(s)	751
BslI	CCNNNNNNNGG	2 cut(s)	573, 788
BsmAI	GTCTC	3 cut(s)	1221, 1617, 1658
BsmFI	GGGAC	1 cut(s)	751
BsmI	GAATGC	2 cut(s)	968, 1463
BsnI	GGCC	7 cut(s)	207, 212, 216, 518, 1279, 1436, 1636
Bso31I	GGTCTC	1 cut(s)	1658
BsoBI	CYCGRG	2 cut(s)	350, 900
Bsp119I	TTCGAA	1 cut(s)	1069
Bsp1286I	GDGCHC	4 cut(s)	375, 909, 1023, 1044
Bsp1407I	TGTACA	1 cut(s)	1204
Bsp143I	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
Bsp68I	TCGCGA	1 cut(s)	467
BspACI	CCGC	9 cut(s)	228, 233, 306, 309, 331, 360, 389, 678, 1276
BspANI	GGCC	7 cut(s)	207, 212, 216, 518, 1279, 1436, 1636
BspCNI	CTCAG	6 cut(s)	754, 910, 1177, 1295, 1579, 1811
BspDI	ATCGAT	1 cut(s)	1470
BspFNI	CGCG	2 cut(s)	230, 467
BspHI	TCATGA	2 cut(s)	1242, 1405
BspLI	GGNNCC	4 cut(s)	372, 393, 793, 925
BspMI	ACCTGC	2 cut(s)	670, 802
BspPI	GGATC	4 cut(s)	386, 399, 599, 1525
BspT104I	TTCGAA	1 cut(s)	1069
BspT107I	GGYRCC	1 cut(s)	370
BspTNI	GGTCTC	1 cut(s)	1658
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	1 cut(s)	813
BsrFI	RCCGGY	1 cut(s)	212
BsrGI	TGTACA	1 cut(s)	1204
BsrI	ACTGG	2 cut(s)	995, 1386
BssAI	RCCGGY	1 cut(s)	212
BssECI	CCNNGG	4 cut(s)	668, 976, 1035, 1055
BssMI	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
BssT1I	CCWWGG	2 cut(s)	668, 1055
Bst2UI	CCWGG	3 cut(s)	209, 978, 1036
Bst4CI	ACNGT	3 cut(s)	110, 184, 280
Bst6I	CTCTTC	3 cut(s)	51, 626, 1446
BstAUI	TGTACA	1 cut(s)	1204
BstBI	TTCGAA	1 cut(s)	1069
BstC8I	GCNNGC	4 cut(s)	214, 855, 1554, 1638
BstDEI	CTNAG	8 cut(s)	762, 918, 1164, 1282, 1424, 1587, 1739, 1798
BstEII	GGTNACC	2 cut(s)	632, 980
BstF5I	GGATG	2 cut(s)	545, 972
BstFNI	CGCG	2 cut(s)	230, 467
BstHHI	GCGC	2 cut(s)	232, 1525
BstKTI	GATC	9 cut(s)	259, 273, 394, 447, 486, 594, 1030, 1520, 1699
BstMAI	GTCTC	3 cut(s)	1221, 1617, 1658
BstMBI	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
BstMWI	GCNNNNNNNGC	6 cut(s)	213, 315, 324, 330, 671, 1187
BstNI	CCWGG	3 cut(s)	209, 978, 1036
BstNSI	RCATGY	1 cut(s)	1529
BstPI	GGTNACC	2 cut(s)	632, 980
BstSCI	CCNGG	3 cut(s)	207, 976, 1034
BstSLI	GKGCMC	3 cut(s)	375, 1023, 1044
BstUI	CGCG	2 cut(s)	230, 467
BstV1I	GCAGC	5 cut(s)	336, 1177, 1199, 1262, 1344
BstX2I	RGATCY	1 cut(s)	391
BstXI	CCANNNNNNTGG	2 cut(s)	202, 526
BstYI	RGATCY	1 cut(s)	391
Bsu15I	ATCGAT	1 cut(s)	1470
Bsu36I	CCTNAGG	1 cut(s)	918
BsuRI	GGCC	7 cut(s)	207, 212, 216, 518, 1279, 1436, 1636
BsuTUI	ATCGAT	1 cut(s)	1470
BtgZI	GCGATG	1 cut(s)	448
BtsCI	GGATG	2 cut(s)	545, 972
BtsI	GCAGTG	2 cut(s)	20, 1751
BtsIMutI	CAGTG	3 cut(s)	20, 1393, 1751
BtuMI	TCGCGA	1 cut(s)	467
BveI	ACCTGC	2 cut(s)	670, 802
Cac8I	GCNNGC	4 cut(s)	214, 855, 1554, 1638
CciI	TCATGA	2 cut(s)	1242, 1405
CfoI	GCGC	2 cut(s)	232, 1525
Cfr10I	RCCGGY	1 cut(s)	212
Cfr13I	GGNCC	2 cut(s)	205, 1278
ClaI	ATCGAT	1 cut(s)	1470
Csp6I	GTAC	6 cut(s)	606, 1004, 1108, 1205, 1319, 1440
CviQI	GTAC	6 cut(s)	606, 1004, 1108, 1205, 1319, 1440
DdeI	CTNAG	8 cut(s)	762, 918, 1164, 1282, 1424, 1587, 1739, 1798
DpnI	GATC	9 cut(s)	258, 272, 393, 446, 485, 593, 1029, 1519, 1698
DpnII	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
DrdI	GACNNNNNNGTC	1 cut(s)	48
DseDI	GACNNNNNNGTC	1 cut(s)	48
EaeI	YGGCCR	1 cut(s)	516
Eam1104I	CTCTTC	3 cut(s)	51, 626, 1446
EarI	CTCTTC	3 cut(s)	51, 626, 1446
EciI	GGCGGA	1 cut(s)	404
Eco130I	CCWWGG	2 cut(s)	668, 1055
Eco147I	AGGCCT	2 cut(s)	1436, 1636
Eco31I	GGTCTC	1 cut(s)	1658
Eco32I	GATATC	1 cut(s)	944
Eco57I	CTGAAG	1 cut(s)	1470
Eco81I	CCTNAGG	1 cut(s)	918
Eco88I	CYCGRG	2 cut(s)	350, 900
Eco91I	GGTNACC	2 cut(s)	632, 980
EcoO65I	GGTNACC	2 cut(s)	632, 980
EcoRII	CCWGG	3 cut(s)	207, 976, 1034
EcoRV	GATATC	1 cut(s)	944
EcoT14I	CCWWGG	2 cut(s)	668, 1055
ErhI	CCWWGG	2 cut(s)	668, 1055
FalI	AAGNNNNNCTT	2 cut(s)	1493, 1525
FaqI	GGGAC	1 cut(s)	751
FauI	CCCGC	1 cut(s)	353
FbaI	TGATCA	1 cut(s)	1027
Fnu4HI	GCNGC	9 cut(s)	233, 307, 310, 325, 1188, 1191, 1251, 1277, 1333
FokI	GGATG	2 cut(s)	552, 959
FseI	GGCCGGCC	1 cut(s)	216
Fsp4HI	GCNGC	9 cut(s)	233, 307, 310, 325, 1188, 1191, 1251, 1277, 1333
FspBI	CTAG	2 cut(s)	597, 1173
GlaI	GCGC	2 cut(s)	231, 1524
GluI	GCNGC	9 cut(s)	233, 307, 310, 325, 1188, 1191, 1251, 1277, 1333
HaeIII	GGCC	7 cut(s)	207, 212, 216, 518, 1279, 1436, 1636
HapII	CCGG	2 cut(s)	213, 1549
HhaI	GCGC	2 cut(s)	232, 1525
Hin6I	GCGC	2 cut(s)	230, 1523
HinP1I	GCGC	2 cut(s)	230, 1523
HincII	GTYRAC	2 cut(s)	1348, 1477
HindII	GTYRAC	2 cut(s)	1348, 1477
HindIII	AAGCTT	1 cut(s)	879
HinfI	GANTC	6 cut(s)	764, 773, 1256, 1375, 1428, 1710
HpaII	CCGG	2 cut(s)	213, 1549
HphI	GGTGA	9 cut(s)	69, 211, 217, 268, 826, 828, 1116, 1723, 1764
Hpy166II	GTNNAC	6 cut(s)	283, 430, 1021, 1077, 1348, 1477
Hpy188I	TCNGA	8 cut(s)	422, 763, 803, 1167, 1450, 1576, 1588, 1801
Hpy8I	GTNNAC	6 cut(s)	283, 430, 1021, 1077, 1348, 1477
HpyAV	CCTTC	2 cut(s)	538, 1121
HpyCH4III	ACNGT	3 cut(s)	110, 184, 280
HpyCH4V	TGCA	7 cut(s)	811, 968, 1021, 1193, 1463, 1562, 1640
HpyF10VI	GCNNNNNNNGC	6 cut(s)	213, 315, 324, 330, 671, 1187
HpyF3I	CTNAG	8 cut(s)	762, 918, 1164, 1282, 1424, 1587, 1739, 1798
HspAI	GCGC	2 cut(s)	230, 1523
KroI	GCCGGC	1 cut(s)	212
KroNI	GCCGGC	1 cut(s)	214
Ksp22I	TGATCA	1 cut(s)	1027
Kzo9I	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
LmnI	GCTCC	3 cut(s)	240, 670, 912
Lsp1109I	GCAGC	5 cut(s)	336, 1177, 1199, 1262, 1344
LweI	GCATC	2 cut(s)	767, 1224
MaeI	CTAG	2 cut(s)	597, 1173
MaeIII	GTNAC	7 cut(s)	75, 184, 274, 632, 859, 980, 1396
MalI	GATC	9 cut(s)	258, 272, 393, 446, 485, 593, 1029, 1519, 1698
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
MboII	GAAGA	8 cut(s)	68, 133, 454, 613, 951, 1463, 1755, 1814
MfeI	CAATTG	2 cut(s)	684, 750
MflI	RGATCY	1 cut(s)	391
MhlI	GDGCHC	4 cut(s)	375, 909, 1023, 1044
MlsI	TGGCCA	1 cut(s)	518
MluCI	AATT	8 cut(s)	524, 684, 750, 999, 1082, 1090, 1616, 1758
MluNI	TGGCCA	1 cut(s)	518
MlyI	GAGTC	2 cut(s)	773, 1422
MmeI	TCCRAC	2 cut(s)	769, 1015
Mox20I	TGGCCA	1 cut(s)	518
MroNI	GCCGGC	1 cut(s)	212
MroXI	GAANNNNTTC	1 cut(s)	880
MscI	TGGCCA	1 cut(s)	518
MseI	TTAA	4 cut(s)	366, 825, 1500, 1785
MslI	CAYNNNNRTG	1 cut(s)	200
Msp20I	TGGCCA	1 cut(s)	518
MspA1I	CMGCKG	2 cut(s)	1190, 1253
MspI	CCGG	2 cut(s)	213, 1549
MspR9I	CCNGG	3 cut(s)	209, 978, 1036
MunI	CAATTG	2 cut(s)	684, 750
Mva1269I	GAATGC	2 cut(s)	968, 1463
MvaI	CCWGG	3 cut(s)	209, 978, 1036
MvnI	CGCG	2 cut(s)	230, 467
MwoI	GCNNNNNNNGC	6 cut(s)	213, 315, 324, 330, 671, 1187
NaeI	GCCGGC	1 cut(s)	214
NdeII	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
NgoMIV	GCCGGC	1 cut(s)	212
NlaIV	GGNNCC	4 cut(s)	372, 393, 793, 925
NmuCI	GTSAC	2 cut(s)	75, 274
NruI	TCGCGA	1 cut(s)	467
NspI	RCATGY	1 cut(s)	1529
NspV	TTCGAA	1 cut(s)	1069
PaeR7I	CTCGAG	1 cut(s)	900
PagI	TCATGA	2 cut(s)	1242, 1405
PaqCI	CACCTGC	1 cut(s)	802
PceI	AGGCCT	2 cut(s)	1436, 1636
PcsI	WCGNNNNNNNCGW	5 cut(s)	291, 294, 297, 309, 392
PctI	GAATGC	2 cut(s)	968, 1463
PdiI	GCCGGC	1 cut(s)	214
PdmI	GAANNNNTTC	1 cut(s)	880
PfeI	GAWTC	4 cut(s)	773, 1256, 1375, 1710
PkrI	GCNGC	9 cut(s)	234, 308, 311, 326, 1189, 1192, 1252, 1278, 1334
PleI	GAGTC	2 cut(s)	772, 1422
PpsI	GAGTC	2 cut(s)	772, 1422
Psp6I	CCWGG	3 cut(s)	207, 976, 1034
PspEI	GGTNACC	2 cut(s)	632, 980
PspGI	CCWGG	3 cut(s)	207, 976, 1034
PspN4I	GGNNCC	4 cut(s)	372, 393, 793, 925
PspPI	GGNCC	2 cut(s)	205, 1278
PspXI	VCTCGAGB	1 cut(s)	900
PsuI	RGATCY	1 cut(s)	391
PvuII	CAGCTG	2 cut(s)	1190, 1253
RigI	GGCCGGCC	1 cut(s)	216
RruI	TCGCGA	1 cut(s)	467
RsaI	GTAC	6 cut(s)	607, 1005, 1109, 1206, 1320, 1441
RsaNI	GTAC	6 cut(s)	606, 1004, 1108, 1205, 1319, 1440
RseI	CAYNNNNRTG	1 cut(s)	200
SaqAI	TTAA	4 cut(s)	366, 825, 1500, 1785
SatI	GCNGC	9 cut(s)	233, 307, 310, 325, 1188, 1191, 1251, 1277, 1333
Sau3AI	GATC	9 cut(s)	256, 270, 391, 444, 483, 591, 1027, 1517, 1696
Sau96I	GGNCC	2 cut(s)	205, 1278
SchI	GAGTC	2 cut(s)	773, 1422
ScrFI	CCNGG	3 cut(s)	209, 978, 1036
SduI	GDGCHC	4 cut(s)	375, 909, 1023, 1044
SfaNI	GCATC	2 cut(s)	767, 1224
SfiI	GGCCNNNNNGGCC	1 cut(s)	213
Sfr274I	CTCGAG	1 cut(s)	900
SfuI	TTCGAA	1 cut(s)	1069
SlaI	CTCGAG	1 cut(s)	900
SmiMI	CAYNNNNRTG	1 cut(s)	200
SmlI	CTYRAG	3 cut(s)	900, 1414, 1430
SmoI	CTYRAG	3 cut(s)	900, 1414, 1430
SpeI	ACTAGT	1 cut(s)	1172
Sse9I	AATT	8 cut(s)	524, 684, 750, 999, 1082, 1090, 1616, 1758
SseBI	AGGCCT	2 cut(s)	1436, 1636
SsiI	CCGC	9 cut(s)	228, 233, 306, 309, 331, 360, 389, 678, 1276
SspMI	CTAG	2 cut(s)	597, 1173
StuI	AGGCCT	2 cut(s)	1436, 1636
StyD4I	CCNGG	3 cut(s)	207, 976, 1034
StyI	CCWWGG	2 cut(s)	668, 1055
TaaI	ACNGT	3 cut(s)	110, 184, 280
TaqI	TCGA	7 cut(s)	380, 901, 1069, 1104, 1265, 1470, 1486
TasI	AATT	8 cut(s)	524, 684, 750, 999, 1082, 1090, 1616, 1758
TatI	WGTACW	2 cut(s)	1204, 1318
TauI	GCSGC	4 cut(s)	235, 309, 312, 1279
TfiI	GAWTC	4 cut(s)	773, 1256, 1375, 1710
Tru1I	TTAA	4 cut(s)	366, 825, 1500, 1785
Tru9I	TTAA	4 cut(s)	366, 825, 1500, 1785
TscAI	CASTG	3 cut(s)	27, 1393, 1758
TseFI	GTSAC	2 cut(s)	75, 274
TseI	GCWGC	5 cut(s)	324, 1187, 1190, 1250, 1332
Tsp45I	GTSAC	2 cut(s)	75, 274
TspDTI	ATGAA	9 cut(s)	80, 750, 873, 942, 961, 1084, 1259, 1388, 1456
TspGWI	ACGGA	5 cut(s)	237, 384, 664, 951, 1352
TspRI	CASTG	3 cut(s)	27, 1393, 1758
VneI	GTGCAC	1 cut(s)	1019
XceI	RCATGY	1 cut(s)	1529
XcmI	CCANNNNNNNNNTGG	1 cut(s)	199
XhoI	CTCGAG	1 cut(s)	900
XmnI	GAANNNNTTC	1 cut(s)	880
XspI	CTAG	2 cut(s)	597, 1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.