pycom02g16080

Acyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
13118226 .. 13124739
6514 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g16080.1

Sequence Viewer

Length: 1668 bp
ATGGCAGACCACGGTATCACCTCCCCCCTCCTCTCTCCTCCACCTTCCGATCACCCCCACTTGATCCTCACCGTCCAAGACGAGACCGAGACCGATACCGATAGCCACCACAACGGCACCCACACTCATCAGAGCACCAGCGCCCACCACCACCACTCTCGCAACCCTTTTGCGTTTCTCGGGTCCGATGGGTTCACCGTGCCCGTTTCCACCACCGCCGACCCGTTTCGGAACCACACCCTGGAGATTACGGGTGTTTACGAGTCGTTAAAGATCGGAATTTGCCTGCCCGTCGCCCTGGCTCGGCTGGTGCTGTTTGGGGTGTCGTTGGTGATTGGGTTTTTGGCGACGAAATTGGCTCTTCAGGGGTGGAGGGATAAGAAGAACCCTATGCCGAGGTGGAGGTGCAGGATTATGTGGATCACTAGGGTCTGTACTCGATGCATTCTCTTCGCTTTTGGCTACCACTGGATAAGACGGAAAGGAAAACCAGCTCCTAGAGACATTGCTCCAATAGTCGTTTCAAACCATGTATCTTTTATTGAACCTATCTTCTATTTCTATGAATTATTCCCTACAATTGTGGCATCCGAATCCCATGATTCCATACCTTTTGTAGGGACGATCATCAGAGCAATGCAGGTGATATATGTTAATAGGTTTTCAGCATCATCAAGGAAGCAAGCTGTTAGTGAAATCAAGGTAGAAAGTTTCTTAAAAATGTGCTTTCAAGGATCTGAATACAGAGAAAAGCTTCGTGTGGTAGATTTCCTCGAGTTCTTTTATTTCCCGAGGGAACCACAACCAACGGGAGATATCTCATTTCATTTGAACTTGGTGCATTCATCCCTGGTTTCGCTATCCAACCAGGGGCACATTTCTTTGGCAAGGCTCATGTTTAGAATGTTCACACAGTTTCACAATTTCATGGAGGTAGAGTACCTTCCTGTTGTTTCACCCCTTGAGAACAAGAAAGAAAGTGCTATCTGTTTTTCGGAGAGGACTAGTCATGCTATTGCAACTGCACTCAACGTTGTACAGACATCTCATTCTTATGGAGACTTAATGCTTCTCACGAAAGCATCTCAGTCAAAATTGAAACCGGAGCGACCTTCGGTGTATATGGTTGAAATGGCAAGTGTAAAATCATTACTCCATATAAGCAGCATGGAAGCTGTGGACTTTCTGGATAAGTTTCTTTCTATGAATCCAGACCCAAGAGGTCATGTTCACTACCATGATTTCTTAAGGGTGCTAAGACTCAAGACTTGTAGCTTTTCCGAAGAGATATGTGCATTTATGGATGTGGAGAAAAGTGGAGTAATAACGTTTAAGCAGTTCTTATTTGGATCAGCGCATATCGTGAAGCAGCCATTGTTCCGTAGAGCCTGTGAATTCGCCTTTTCAGAATGCGTTTCTGGGGAGAGTGACCATGTTTCAGAACAAAAATTTGGAGAGTCCATCAGACCTGCAATCCCGGATTTGAACGAGGATGAGGTCCGTGAACTGTTCAATCTATTTGATTCTGATAACGATGGAAGAATCAACAAGGAAGATTTTTTGACGTGCCTAAGAAAAAACCCACTACTGATTGCGCTTTTCTCGCCTTGTTTGCATAACAAAGACATTTCAGAAGATGGTAATAGGTTGGTTGAGGAGATTGTGTAG

Protein Analysis

556

Amino Acids

63.18

Weight (kDa)

6.55

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 464 - 522 5.9e-07 EF-hand domain pair
EF-hand_8 PF13833 493 - 526 1.2e-08 EF-hand domain pair
EF-hand_1 PF00036 499 - 526 4.3e-07 EF hand domain
EF-hand_6 PF13405 499 - 526 1.3e-06 EF-hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 631
Acc36I ACCTGC 2 cut(s) 631, 1477
AccB1I GGYRCC 1 cut(s) 116
AccB7I CCANNNNNTGG 1 cut(s) 241
AciI CCGC 1 cut(s) 216
AclI AACGTT 2 cut(s) 1032, 1328
AclWI GGATC 4 cut(s) 58, 428, 742, 1357
AcsI RAATTY 3 cut(s) 279, 1394, 1448
AcuI CTGAAG 1 cut(s) 347
AfaI GTAC 3 cut(s) 436, 941, 1038
AfiI CCNNNNNNNGG 4 cut(s) 241, 303, 617, 870
AflII CTTAAG 1 cut(s) 1246
AgsI TTSAA 8 cut(s) 525, 545, 731, 832, 1099, 1130, 1486, 1513
AhlI ACTAGT 1 cut(s) 1004
AjiI CACGTC 1 cut(s) 1566
AjnI CCWGG 4 cut(s) 240, 297, 849, 867
AjuI GAANNNNNNNTTGG 4 cut(s) 505, 537, 1434, 1466
AluBI AGCT 5 cut(s) 494, 686, 754, 1175, 1275
AluI AGCT 5 cut(s) 494, 686, 754, 1175, 1275
Alw21I GWGCWC 1 cut(s) 137
Alw26I GTCTC 4 cut(s) 77, 83, 495, 1053
AlwI GGATC 4 cut(s) 58, 428, 742, 1357
Ama87I CYCGRG 3 cut(s) 179, 773, 790
ApeKI GCWGC 2 cut(s) 1164, 1369
ApoI RAATTY 3 cut(s) 279, 1394, 1448
Asp700I GAANNNNTTC 1 cut(s) 753
AspLEI GCGC 3 cut(s) 143, 1357, 1597
AspS9I GGNCC 2 cut(s) 183, 1498
AsuC2I CCSGG 1 cut(s) 1478
AsuHPI GGTGA 7 cut(s) 10, 44, 61, 187, 343, 655, 948
AvaI CYCGRG 3 cut(s) 179, 773, 790
AvaII GGWCC 2 cut(s) 183, 1498
BaeGI GKGCMC 2 cut(s) 204, 876
BaeI ACNNNNGTAYC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 116
BarI GAAGNNNNNNTAC 2 cut(s) 927, 959
Bbv12I GWGCWC 1 cut(s) 137
BbvI GCAGC 2 cut(s) 1176, 1381
BccI CCATC 4 cut(s) 182, 1469, 1529, 1631
BceAI ACGGC 1 cut(s) 130
BcgI CGANNNNNNTGC 2 cut(s) 433, 467
BciT130I CCWGG 4 cut(s) 242, 299, 851, 869
BcnI CCSGG 1 cut(s) 1478
BcoDI GTCTC 4 cut(s) 77, 83, 495, 1053
BcuI ACTAGT 1 cut(s) 1004
BfaI CTAG 3 cut(s) 426, 498, 1005
BfoI RGCGCY 1 cut(s) 144
BfrI CTTAAG 1 cut(s) 1246
BfuAI ACCTGC 2 cut(s) 631, 1477
BisI GCNGC 2 cut(s) 1165, 1370
BlsI GCNGC 2 cut(s) 1166, 1371
Bme1390I CCNGG 5 cut(s) 242, 299, 851, 869, 1478
Bme18I GGWCC 2 cut(s) 183, 1498
BmeT110I CYCGRG 3 cut(s) 179, 773, 790
BmgBI CACGTC 1 cut(s) 1566
BmgT120I GGNCC 2 cut(s) 183, 1498
BmiI GGNNCC 4 cut(s) 118, 184, 233, 798
BmrFI CCNGG 5 cut(s) 242, 299, 851, 869, 1478
BmsI GCATC 4 cut(s) 431, 596, 677, 1091
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 2 cut(s) 983, 1247
BpuMI CCSGG 1 cut(s) 1478
BsaI GGTCTC 2 cut(s) 77, 83
BsaJI CCNNGG 7 cut(s) 10, 240, 297, 395, 791, 849, 868
BsaWI WCCGGW 1 cut(s) 1102
BsaXI ACNNNNNCTCC 3 cut(s) 923, 953, 1649
Bsc4I CCNNNNNNNGG 4 cut(s) 241, 303, 617, 870
Bse1I ACTGG 1 cut(s) 473
Bse3DI GCAATG 2 cut(s) 504, 642
BseBI CCWGG 4 cut(s) 242, 299, 851, 869
BseDI CCNNGG 7 cut(s) 10, 240, 297, 395, 791, 849, 868
BseGI GGATG 4 cut(s) 587, 845, 1309, 1498
BseLI CCNNNNNNNGG 4 cut(s) 241, 303, 617, 870
BseMI GCAATG 2 cut(s) 504, 642
BseMII CTCAG 1 cut(s) 1100
BseNI ACTGG 1 cut(s) 473
BseRI GAGGAG 2 cut(s) 20, 27
BseSI GKGCMC 2 cut(s) 204, 876
BseXI GCAGC 2 cut(s) 1176, 1381
BsgI GTGCAG 2 cut(s) 427, 1008
BshNI GGYRCC 1 cut(s) 116
BsiHKAI GWGCWC 1 cut(s) 137
BsiHKCI CYCGRG 3 cut(s) 179, 773, 790
BsiSI CCGG 2 cut(s) 1103, 1478
BslFI GGGAC 1 cut(s) 634
BslI CCNNNNNNNGG 4 cut(s) 241, 303, 617, 870
BsmAI GTCTC 4 cut(s) 77, 83, 495, 1053
BsmFI GGGAC 1 cut(s) 634
BsmI GAATGC 3 cut(s) 444, 841, 1415
Bso31I GGTCTC 2 cut(s) 77, 83
BsoBI CYCGRG 3 cut(s) 179, 773, 790
Bsp1286I GDGCHC 3 cut(s) 137, 204, 876
Bsp1407I TGTACA 1 cut(s) 1036
Bsp143I GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
BspACI CCGC 1 cut(s) 216
BspCNI CTCAG 1 cut(s) 1099
BspLI GGNNCC 4 cut(s) 118, 184, 233, 798
BspMI ACCTGC 2 cut(s) 631, 1477
BspPI GGATC 4 cut(s) 58, 428, 742, 1357
BspQI GCTCTTC 1 cut(s) 366
BspT107I GGYRCC 1 cut(s) 116
BspTI CTTAAG 1 cut(s) 1246
BspTNI GGTCTC 2 cut(s) 77, 83
BsrDI GCAATG 2 cut(s) 504, 642
BsrGI TGTACA 1 cut(s) 1036
BsrI ACTGG 1 cut(s) 473
BssECI CCNNGG 7 cut(s) 10, 240, 297, 395, 791, 849, 868
BssMI GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
Bst2UI CCWGG 4 cut(s) 242, 299, 851, 869
Bst4CI ACNGT 5 cut(s) 14, 73, 199, 915, 1509
Bst6I CTCTTC 3 cut(s) 366, 455, 1278
BstAFI CTTAAG 1 cut(s) 1246
BstAUI TGTACA 1 cut(s) 1036
BstC8I GCNNGC 2 cut(s) 287, 684
BstDEI CTNAG 3 cut(s) 1086, 1256, 1571
BstDSI CCRYGG 1 cut(s) 10
BstENI CCTNNNNNAGG 1 cut(s) 615
BstF5I GGATG 4 cut(s) 587, 845, 1309, 1498
BstH2I RGCGCY 1 cut(s) 144
BstHHI GCGC 3 cut(s) 143, 1357, 1597
BstKTI GATC 7 cut(s) 52, 66, 276, 423, 627, 737, 1352
BstMAI GTCTC 4 cut(s) 77, 83, 495, 1053
BstMBI GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
BstMWI GCNNNNNNNGC 2 cut(s) 1603, 1612
BstNI CCWGG 4 cut(s) 242, 299, 851, 869
BstSCI CCNGG 5 cut(s) 240, 297, 849, 867, 1476
BstSLI GKGCMC 2 cut(s) 204, 876
BstV1I GCAGC 2 cut(s) 1176, 1381
BstX2I RGATCY 1 cut(s) 734
BstYI RGATCY 1 cut(s) 734
BtgI CCRYGG 1 cut(s) 10
BtrI CACGTC 1 cut(s) 1566
BtsCI GGATG 4 cut(s) 587, 845, 1309, 1498
BtsIMutI CAGTG 1 cut(s) 466
BveI ACCTGC 2 cut(s) 631, 1477
Cac8I GCNNGC 2 cut(s) 287, 684
CfoI GCGC 3 cut(s) 143, 1357, 1597
Cfr13I GGNCC 2 cut(s) 183, 1498
Csp6I GTAC 3 cut(s) 435, 940, 1037
CviAII CATG 9 cut(s) 530, 599, 895, 928, 1010, 1168, 1226, 1238, 1433
CviQI GTAC 3 cut(s) 435, 940, 1037
DdeI CTNAG 3 cut(s) 1086, 1256, 1571
DpnI GATC 7 cut(s) 51, 65, 275, 422, 626, 736, 1351
DpnII GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
Eam1104I CTCTTC 3 cut(s) 366, 455, 1278
EarI CTCTTC 3 cut(s) 366, 455, 1278
Eco31I GGTCTC 2 cut(s) 77, 83
Eco32I GATATC 1 cut(s) 817
Eco47I GGWCC 2 cut(s) 183, 1498
Eco57I CTGAAG 1 cut(s) 347
Eco88I CYCGRG 3 cut(s) 179, 773, 790
EcoNI CCTNNNNNAGG 1 cut(s) 615
EcoRI GAATTC 1 cut(s) 1394
EcoRII CCWGG 4 cut(s) 240, 297, 849, 867
EcoRV GATATC 1 cut(s) 817
EcoT22I ATGCAT 1 cut(s) 446
FaeI CATG 9 cut(s) 533, 602, 898, 931, 1013, 1171, 1229, 1241, 1436
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 1 cut(s) 634
FatI CATG 9 cut(s) 529, 598, 894, 927, 1009, 1167, 1225, 1237, 1432
Fnu4HI GCNGC 2 cut(s) 1165, 1370
FokI GGATG 4 cut(s) 574, 832, 1316, 1505
Fsp4HI GCNGC 2 cut(s) 1165, 1370
FspBI CTAG 3 cut(s) 426, 498, 1005
GlaI GCGC 3 cut(s) 142, 1356, 1596
GluI GCNGC 2 cut(s) 1165, 1370
GsuI CTGGAG 1 cut(s) 263
HaeII RGCGCY 1 cut(s) 144
HapII CCGG 2 cut(s) 1103, 1478
HhaI GCGC 3 cut(s) 143, 1357, 1597
Hin1II CATG 9 cut(s) 533, 602, 898, 931, 1013, 1171, 1229, 1241, 1436
Hin6I GCGC 3 cut(s) 141, 1355, 1595
HinP1I GCGC 3 cut(s) 141, 1355, 1595
HindIII AAGCTT 1 cut(s) 752
HinfI GANTC 8 cut(s) 263, 593, 602, 1207, 1260, 1457, 1523, 1542
HpaII CCGG 2 cut(s) 1103, 1478
HphI GGTGA 7 cut(s) 10, 44, 61, 187, 343, 655, 948
Hpy166II GTNNAC 6 cut(s) 195, 259, 909, 1180, 1231, 1505
Hpy188III TCNNGA 6 cut(s) 790, 1075, 1187, 1211, 1264, 1363
Hpy8I GTNNAC 6 cut(s) 195, 259, 909, 1180, 1231, 1505
Hpy99I CGWCG 2 cut(s) 296, 352
HpyAV CCTTC 3 cut(s) 54, 953, 1122
HpyCH4III ACNGT 5 cut(s) 14, 73, 199, 915, 1509
HpyCH4IV ACGT 3 cut(s) 1032, 1328, 1565
HpyCH4V TGCA 9 cut(s) 408, 444, 640, 841, 1019, 1025, 1295, 1472, 1615
HpyF10VI GCNNNNNNNGC 2 cut(s) 1603, 1612
HpyF3I CTNAG 3 cut(s) 1086, 1256, 1571
HpySE526I ACGT 3 cut(s) 1032, 1328, 1565
Hsp92II CATG 9 cut(s) 533, 602, 898, 931, 1013, 1171, 1229, 1241, 1436
HspAI GCGC 3 cut(s) 141, 1355, 1595
Kzo9I GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
LguI GCTCTTC 1 cut(s) 366
LmnI GCTCC 3 cut(s) 499, 514, 1105
Lsp1109I GCAGC 2 cut(s) 1176, 1381
LweI GCATC 4 cut(s) 431, 596, 677, 1091
MaeI CTAG 3 cut(s) 426, 498, 1005
MaeII ACGT 3 cut(s) 1032, 1328, 1565
MaeIII GTNAC 1 cut(s) 1427
MalI GATC 7 cut(s) 51, 65, 275, 422, 626, 736, 1351
MboI GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
MboII GAAGA 8 cut(s) 353, 394, 442, 544, 1295, 1551, 1565, 1646
MfeI CAATTG 1 cut(s) 579
MflI RGATCY 1 cut(s) 734
MhlI GDGCHC 3 cut(s) 137, 204, 876
MluCI AATT 8 cut(s) 279, 353, 566, 579, 922, 1094, 1394, 1448
MlyI GAGTC 3 cut(s) 272, 1254, 1466
MmeI TCCRAC 1 cut(s) 888
Mph1103I ATGCAT 1 cut(s) 446
MroXI GAANNNNTTC 1 cut(s) 753
MseI TTAA 6 cut(s) 269, 654, 716, 1064, 1247, 1332
MslI CAYNNNNRTG 2 cut(s) 1053, 1236
MspCI CTTAAG 1 cut(s) 1246
MspI CCGG 2 cut(s) 1103, 1478
MspR9I CCNGG 5 cut(s) 242, 299, 851, 869, 1478
MunI CAATTG 1 cut(s) 579
Mva1269I GAATGC 3 cut(s) 444, 841, 1415
MvaI CCWGG 4 cut(s) 242, 299, 851, 869
MwoI GCNNNNNNNGC 2 cut(s) 1603, 1612
NciI CCSGG 1 cut(s) 1478
NdeII GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
NlaIII CATG 9 cut(s) 533, 602, 898, 931, 1013, 1171, 1229, 1241, 1436
NlaIV GGNNCC 4 cut(s) 118, 184, 233, 798
NmeAIII GCCGAG 2 cut(s) 283, 420
NmuCI GTSAC 1 cut(s) 1427
NsiI ATGCAT 1 cut(s) 446
PaeR7I CTCGAG 1 cut(s) 773
PaqCI CACCTGC 1 cut(s) 631
PciSI GCTCTTC 1 cut(s) 366
PctI GAATGC 3 cut(s) 444, 841, 1415
PdmI GAANNNNTTC 1 cut(s) 753
PfeI GAWTC 5 cut(s) 593, 602, 1207, 1523, 1542
PflMI CCANNNNNTGG 1 cut(s) 241
PfoI TCCNGGA 1 cut(s) 1476
PkrI GCNGC 2 cut(s) 1166, 1371
PleI GAGTC 3 cut(s) 271, 1254, 1465
PpsI GAGTC 3 cut(s) 271, 1254, 1465
Psp1406I AACGTT 2 cut(s) 1032, 1328
Psp6I CCWGG 4 cut(s) 240, 297, 849, 867
PspGI CCWGG 4 cut(s) 240, 297, 849, 867
PspN4I GGNNCC 4 cut(s) 118, 184, 233, 798
PspPI GGNCC 2 cut(s) 183, 1498
PspXI VCTCGAGB 1 cut(s) 773
PsuI RGATCY 1 cut(s) 734
RsaI GTAC 3 cut(s) 436, 941, 1038
RsaNI GTAC 3 cut(s) 435, 940, 1037
RseI CAYNNNNRTG 2 cut(s) 1053, 1236
SapI GCTCTTC 1 cut(s) 366
SaqAI TTAA 6 cut(s) 269, 654, 716, 1064, 1247, 1332
SatI GCNGC 2 cut(s) 1165, 1370
Sau3AI GATC 7 cut(s) 49, 63, 273, 420, 624, 734, 1349
Sau96I GGNCC 2 cut(s) 183, 1498
SchI GAGTC 3 cut(s) 272, 1254, 1466
ScrFI CCNGG 5 cut(s) 242, 299, 851, 869, 1478
SduI GDGCHC 3 cut(s) 137, 204, 876
SfaNI GCATC 4 cut(s) 431, 596, 677, 1091
Sfr274I CTCGAG 1 cut(s) 773
SinI GGWCC 2 cut(s) 183, 1498
SlaI CTCGAG 1 cut(s) 773
SmiMI CAYNNNNRTG 2 cut(s) 1053, 1236
SmlI CTYRAG 4 cut(s) 773, 962, 1246, 1262
SmoI CTYRAG 4 cut(s) 773, 962, 1246, 1262
SpeI ACTAGT 1 cut(s) 1004
Sse9I AATT 8 cut(s) 279, 353, 566, 579, 922, 1094, 1394, 1448
SsiI CCGC 1 cut(s) 216
SspMI CTAG 3 cut(s) 426, 498, 1005
StyD4I CCNGG 5 cut(s) 240, 297, 849, 867, 1476
TaaI ACNGT 5 cut(s) 14, 73, 199, 915, 1509
TaiI ACGT 3 cut(s) 1035, 1331, 1568
TaqI TCGA 2 cut(s) 439, 774
TaqII GACCGA 2 cut(s) 101, 107
TasI AATT 8 cut(s) 279, 353, 566, 579, 922, 1094, 1394, 1448
TatI WGTACW 2 cut(s) 434, 1036
TfiI GAWTC 5 cut(s) 593, 602, 1207, 1523, 1542
Tru1I TTAA 6 cut(s) 269, 654, 716, 1064, 1247, 1332
Tru9I TTAA 6 cut(s) 269, 654, 716, 1064, 1247, 1332
TscAI CASTG 1 cut(s) 473
TseFI GTSAC 1 cut(s) 1427
TseI GCWGC 2 cut(s) 1164, 1369
Tsp45I GTSAC 1 cut(s) 1427
TspDTI ATGAA 5 cut(s) 579, 815, 834, 916, 1220
TspGWI ACGGA 3 cut(s) 493, 1370, 1490
TspRI CASTG 1 cut(s) 473
Van91I CCANNNNNTGG 1 cut(s) 241
Vha464I CTTAAG 1 cut(s) 1246
VpaK11BI GGWCC 2 cut(s) 183, 1498
XagI CCTNNNNNAGG 1 cut(s) 615
XapI RAATTY 3 cut(s) 279, 1394, 1448
XhoI CTCGAG 1 cut(s) 773
XmnI GAANNNNTTC 1 cut(s) 753
XspI CTAG 3 cut(s) 426, 498, 1005
Zsp2I ATGCAT 1 cut(s) 446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.