FvH4_7g16681
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0002674
Physical Location & Seq
Reverse (-)
14253497 .. 14263744
10248 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16681.t3

Sequence Viewer

Length: 3030 bp
ATGACACGTAAAACACACTTCAAGCTTTCCCCATCGCTCGAATTTTCCGATTCAATCTCTATGGACTCGCCGCCGCACGACCGCTGGAGCAAGCGCGGCGCCGGCCCGAAGTCGCGTTCCAGTGACGCGGCGCAGATGAAGAGCGGCGCGGATAAGAAGATCAAGAGAGACAGTGAAGAAGTGGCGGAGGAGGATCGCCGCTGCACTCGTCGCGCCGGCGCGTGGCGGTGCGGCGAGGAGGTGGTGGTTGGGAAGCCGATGTGTGAGCATCACTTGGCGCAGAGAAAGAGTTATCAGAAGAAAAGAAGAGGCGGAGGCGCAGACAGCGATTCCGGCGAAGAAGACGGAGCTAGCCGGAAAGTCAACGCCGGCGAATCGGTGAACAATAAGAGGAGGAGGAGGACCGGGAGTGAGTCTGAGTCGGACTCCGAGTCGGAGAAGGCGAATAATCGGACGGTAAAACCGAAGGTGAATGGTAAATCTGGAGATTCTGGTAATGTTATGAAGAAGAGTAAGTTAAAAGAGGAAAAGCCTATGGAAAAGAGCAAGTCTAACAGAAGCAAGGGGAGCTTGATGTGTCACCAGTGCCAGCGGAACGATAAGAATGGTGTTGTGCACTGCTCTCTGTGTAAAGCAAAGCGGTTTTGCTACGAGTGCATTGAAAGATGGTACCCTGGGAAATCAAGAGAGGATTTTGAGAATGCGTGCCCGTTTTGCTGTGGCAACTGCAACTGCAAAGCGTGCCTGCGCGAGTTTTTGGTTAAACCTTGCCGAGAAGTTGATCCGAGTGTTAAGTTACAACGACTGCGTTACTTGTTGTATAAGGCTTTGCCTGTGCTGAGGCATATATATAGTGAGCAGAGCTCTGAGCTGGAGATTGAAGCCAAAATCAGAGGTGTACATTTGACTGAAATGGACATAAAGAGAACTAAAGTAGACCGAAATGAGCGAATGTACTGTGACAATTGCTATACATCCATTGTCGATTTCCACAGAAGCTGTCCGAACCCCAATTGTTCCTATGACCTGTGTCTTACTTGTTGCAAAGAGCTAAGGAATGGTCGGCAACCTGGAGGTAGTGAAGCAGAAACATCTCACCAGCAAGCTTTAGATAGAGCCCATAAAGAAGTGAAAGGACATTGCTGGGAGAGTAAAGGTGCATCTACTTCTGATGATTCTAAAGTTGATCCATCCATATCTTTTCCAAATTGGAGAGCTGATTCTCATGGCAGCATTCCATGTCCTCCAAAAGAACGTGGAGGTTGTGGCAATGTGAAGCTGGAATTGAGGCGTAAATTCAAAGCTAATTGGGTGATGAAGCTGCTAAAAAACGCAGAAGATTTTACTACTGACTTCAAGTGGCAAGAAGCCGATATTTCTAAAGGATGTTCCTGGTGCCAGCCAAATGATTCTGAGGGAACTAATGATAGCCAGCCTGAAAGGAGGCAAGCAGCTTTCAGAAAAAACAGTCATGATAACTTCTTATACTGTCCAAATGCTATTGACATTTCAGATGATGAGATTGAGCATTTTCAGAGGCACTGGATGAAGGGGGAACCGGTGATAGTCAGAAATGTTCTTGACAAGACATCTGGTCTTAGTTGGGAACCTATGGTTATGTGGAGGGCTTTCAGAGAAACGGGTGCTAATGTAAAGTTCAAAGAGGAGACTAAAAGTGTAAAAGCCATAGATTGCTGGGATTGGAATGAGGTTGAGATTAATATTCACCAATTTTTCACGGGCTACTTAGCGGGTCGCATGCATAAAACAAAGTGGCCAGAGATGTTAAAATTAAAGGATTGGCCATCATCAACTTTGTTTGAGGAACGCTTGCCAAGACACTGTGCGGAATTCATTGCAGCACTACCCTACTGTGACTATACTGATCCCAAAGATTCAAATGCTGGTATTCTCAATCTTGCTACTAGACTTCCTGAAAAGTCACTGAAACCTGATATGGGACCAAAAACTTACATTGCTTATGGATTCTCCGAAGAGCTTGGTAGAGGTGATTCAGTGACTAAATTGCATTGCGATATGTCTGATGCGGTAAATGTTTTGACACACACAACAACAGTGAAGATCCACTCTTGGCAGCAGAATGCCATAAAGGCTTTGAAGAGCAAGCATGTAGCTGAAGACCTTTGTGAACTCTACAATGAAAGAACTCACGAGAAGGGCAAGGGTGGGGAGGGAAACAATCTGGACAGAGCACAATCATGTAGGACTTCACCTTTGTCAGATTCTGTCAATCCAGGCATCCTTAGATCTGATGAAACAGAGTATGTTCCGGAACCTGTTGCAACTACTGAACTAAATAAAGCAAAGGTCGCGAGTGTTGATCATCAGAGGAATGATGTGCTAAAATCCACCTCACCTCATGCAAACGGAGTTGAAACAAAGCAAGAGTGTGTTCAATGTTCCAGTGACACAATCAGTGGAAGGCTTGAAGGGAAAGATGCTTCAAGGAATGCAAGTGAGGTAAACTCCCGGGCAACAAAGGATTTCAAAAGTAGTGACAAGTTGGACGTTGTCCATGGTGGTGCTGTTTGGGACATCTTTCGTATCGAGGACACTTCTAAGTTAATAGAGTACCTGAAGAAACACAAAAAAGAATTTCGCCACCTTAATAATCATCCTGTAGAATCTGTTGTTCATCCTATTCACGATCAGACTCTGTACTTGAATGAGAGACATAAAAAACAACTGAAGCAGGAGTATGATGTGGAGCCTTGGACATTTGAGCAACATCTTGGTGAGGCAGTTTTTATTCCAGCGGGATGTCCTCATCAAGTGAGAAATAGACAATCTTGTATAAAGGTAGCACTTGATTTTGTATCTCCTGAGAATCTTGAGGTATGTCTGCGATTAACTGAAGAGTTTCGTTTACTCCCAAAAACCCACAGAGCCAAGGAAGATAAATTGGAGGTGAAGAAGATGACACTTTATGCTGTAAGTTCAGCACTGAGAGAAGCCAAAAGTCTGATGCCGGAACTGGGAACGTCAAACGCAGAGAAAGATGACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC WRC zf-4CXXC_R1

Protein Analysis

1010

Amino Acids

114.8

Weight (kDa)

8.53

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 847 - 945 1.7e-15 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 669
AccB1I GGYRCC 3 cut(s) 98, 669, 1395
AccBSI CCGCTC 1 cut(s) 144
AccI GTMKAC 1 cut(s) 936
AccII CGCG 8 cut(s) 96, 115, 128, 149, 213, 221, 750, 2333
AccIII TCCGGA 1 cut(s) 2290
AclWI GGATC 5 cut(s) 201, 776, 1181, 1880, 2077
AcoI YGGCCR 2 cut(s) 1775, 1802
AcsI RAATTY 4 cut(s) 41, 1295, 1850, 2615
AcuI CTGAAG 4 cut(s) 2157, 2618, 2729, 2895
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 5 cut(s) 671, 900, 956, 2594, 2681
AfiI CCNNNNNNNGG 3 cut(s) 222, 1958, 2996
AflIII ACRYGT 1 cut(s) 5
AgeI ACCGGT 1 cut(s) 1558
AhdI GACNNNNNGTC 2 cut(s) 430, 1593
AjnI CCWGG 4 cut(s) 673, 1069, 1391, 2254
Alw21I GWGCWC 3 cut(s) 618, 866, 2215
Alw26I GTCTC 3 cut(s) 162, 1661, 2686
Alw44I GTGCAC 1 cut(s) 614
AlwI GGATC 5 cut(s) 201, 776, 1181, 1880, 2077
AlwNI CAGNNNCTG 3 cut(s) 999, 2246, 2677
Ama87I CYCGRG 1 cut(s) 2490
Aor13HI TCCGGA 1 cut(s) 2290
AoxI GGCC 3 cut(s) 103, 1775, 1802
ApaLI GTGCAC 1 cut(s) 614
ApeKI GCWGC 6 cut(s) 201, 1230, 1321, 1451, 1859, 2095
ApoI RAATTY 4 cut(s) 41, 1295, 1850, 2615
ArsI GACNNNNNNTTYG 2 cut(s) 2218, 2250
AseI ATTAAT 1 cut(s) 1719
AsiGI ACCGGT 1 cut(s) 1558
Asp700I GAANNNNTTC 1 cut(s) 2880
Asp718I GGTACC 1 cut(s) 669
AspLEI GCGC 9 cut(s) 96, 101, 133, 149, 215, 221, 280, 320, 750
AspS9I GGNCC 3 cut(s) 104, 402, 1961
AsuC2I CCSGG 3 cut(s) 406, 2491, 2492
AsuNHI GCTAGC 1 cut(s) 350
AvaI CYCGRG 1 cut(s) 2490
AvaII GGWCC 2 cut(s) 402, 1961
BaeGI GKGCMC 2 cut(s) 618, 710
BalI TGGCCA 2 cut(s) 1777, 1804
BanI GGYRCC 3 cut(s) 98, 669, 1395
BanII GRGCYC 2 cut(s) 866, 1120
BauI CACGAG 1 cut(s) 2171
BbsI GAAGAC 2 cut(s) 348, 2145
Bbv12I GWGCWC 3 cut(s) 618, 866, 2215
BbvCI CCTCAGC 1 cut(s) 839
BbvI GCAGC 6 cut(s) 188, 1242, 1308, 1463, 1871, 2107
BccI CCATC 4 cut(s) 40, 660, 1198, 1813
BciT130I CCWGG 4 cut(s) 675, 1071, 1393, 2256
BclI TGATCA 1 cut(s) 2341
BcnI CCSGG 3 cut(s) 406, 2491, 2492
BcoDI GTCTC 3 cut(s) 162, 1661, 2686
BfaI CTAG 2 cut(s) 351, 1926
BfmI CTRYAG 1 cut(s) 2640
BfoI RGCGCY 1 cut(s) 102
BglI GCCNNNNNGGC 1 cut(s) 2111
BglII AGATCT 1 cut(s) 2267
Bme1390I CCNGG 7 cut(s) 406, 675, 1071, 1393, 2256, 2491, 2492
Bme18I GGWCC 2 cut(s) 402, 1961
BmeRI GACNNNNNGTC 2 cut(s) 430, 1593
BmeT110I CYCGRG 1 cut(s) 2490
BmgT120I GGNCC 3 cut(s) 104, 402, 1961
BmiI GGNNCC 8 cut(s) 100, 671, 1397, 1557, 1608, 1962, 2295, 2730
BmrFI CCNGG 7 cut(s) 406, 675, 1071, 1393, 2256, 2491, 2492
BmrI ACTGGG 1 cut(s) 3005
BmsI GCATC 6 cut(s) 277, 1169, 2035, 2268, 2449, 2976
BmtI GCTAGC 1 cut(s) 354
BmuI ACTGGG 1 cut(s) 3005
BoxI GACNNNNGTC 1 cut(s) 1029
BpiI GAAGAC 2 cut(s) 348, 2145
BplI GAGNNNNNCTC 6 cut(s) 410, 442, 848, 880, 2471, 2503
BpmI CTGGAG 4 cut(s) 106, 504, 893, 1092
Bpu10I CCTNAGC 2 cut(s) 839, 1052
BpuEI CTTGAG 1 cut(s) 2873
BpuMI CCSGG 3 cut(s) 406, 2491, 2492
BsaAI YACGTR 1 cut(s) 8
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 6 cut(s) 673, 674, 2490, 2536, 2732, 2910
BsaWI WCCGGW 2 cut(s) 1558, 2290
Bsc4I CCNNNNNNNGG 3 cut(s) 222, 1958, 2996
Bse118I RCCGGY 4 cut(s) 101, 215, 368, 1558
Bse1I ACTGG 5 cut(s) 120, 583, 1547, 2424, 3000
Bse3DI GCAATG 5 cut(s) 1138, 1276, 1854, 1974, 2029
BseAI TCCGGA 1 cut(s) 2290
BseBI CCWGG 4 cut(s) 675, 1071, 1393, 2256
BseDI CCNNGG 6 cut(s) 673, 674, 2490, 2536, 2732, 2910
BseGI GGATG 8 cut(s) 974, 1190, 1391, 1551, 2259, 2635, 2656, 2786
BseLI CCNNNNNNNGG 3 cut(s) 222, 1958, 2996
BseMI GCAATG 5 cut(s) 1138, 1276, 1854, 1974, 2029
BseMII CTCAG 6 cut(s) 408, 830, 858, 1404, 2835, 2957
BseNI ACTGG 5 cut(s) 120, 583, 1547, 2424, 3000
BseRI GAGGAG 6 cut(s) 203, 251, 406, 409, 412, 1679
BseSI GKGCMC 2 cut(s) 618, 710
BseXI GCAGC 6 cut(s) 188, 1242, 1308, 1463, 1871, 2107
BseYI CCCAGC 2 cut(s) 1143, 1695
BsgI GTGCAG 1 cut(s) 187
Bsh1236I CGCG 8 cut(s) 96, 115, 128, 149, 213, 221, 750, 2333
Bsh1285I CGRYCG 1 cut(s) 82
BshFI GGCC 3 cut(s) 105, 1777, 1804
BshNI GGYRCC 3 cut(s) 98, 669, 1395
BshTI ACCGGT 1 cut(s) 1558
BsiEI CGRYCG 1 cut(s) 82
BsiHKAI GWGCWC 3 cut(s) 618, 866, 2215
BsiHKCI CYCGRG 1 cut(s) 2490
BslFI GGGAC 2 cut(s) 1974, 2567
BslI CCNNNNNNNGG 3 cut(s) 222, 1958, 2996
BsmAI GTCTC 3 cut(s) 162, 1661, 2686
BsmFI GGGAC 2 cut(s) 1974, 2567
BsmI GAATGC 4 cut(s) 706, 1233, 2107, 2476
BsnI GGCC 3 cut(s) 105, 1777, 1804
BsoBI CYCGRG 1 cut(s) 2490
Bsp1286I GDGCHC 5 cut(s) 618, 710, 866, 1120, 2215
Bsp13I TCCGGA 1 cut(s) 2290
Bsp1407I TGTACA 1 cut(s) 898
Bsp143I GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
Bsp19I CCATGG 1 cut(s) 2536
Bsp68I TCGCGA 1 cut(s) 2333
BspANI GGCC 3 cut(s) 105, 1777, 1804
BspCNI CTCAG 6 cut(s) 409, 831, 859, 1405, 2836, 2958
BspEI TCCGGA 1 cut(s) 2290
BspFNI CGCG 8 cut(s) 96, 115, 128, 149, 213, 221, 750, 2333
BspHI TCATGA 1 cut(s) 1471
BspLI GGNNCC 8 cut(s) 100, 671, 1397, 1557, 1608, 1962, 2295, 2730
BspOI GCTAGC 1 cut(s) 354
BspPI GGATC 5 cut(s) 201, 776, 1181, 1880, 2077
BspQI GCTCTTC 3 cut(s) 134, 1989, 2114
BspT107I GGYRCC 3 cut(s) 98, 669, 1395
BsrBI CCGCTC 1 cut(s) 144
BsrDI GCAATG 5 cut(s) 1138, 1276, 1854, 1974, 2029
BsrFI RCCGGY 4 cut(s) 101, 215, 368, 1558
BsrGI TGTACA 1 cut(s) 898
BsrI ACTGG 5 cut(s) 120, 583, 1547, 2424, 3000
BssAI RCCGGY 4 cut(s) 101, 215, 368, 1558
BssECI CCNNGG 6 cut(s) 673, 674, 2490, 2536, 2732, 2910
BssMI GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
BssNI GRCGYC 1 cut(s) 99
BssSI CACGAG 1 cut(s) 2171
BssT1I CCWWGG 3 cut(s) 2536, 2732, 2910
Bst2BI CACGAG 1 cut(s) 2171
Bst2UI CCWGG 4 cut(s) 675, 1071, 1393, 2256
Bst4CI ACNGT 8 cut(s) 173, 457, 959, 1469, 1490, 1844, 1874, 2077
Bst6I CTCTTC 6 cut(s) 134, 301, 503, 1989, 2114, 2871
BstACI GRCGYC 1 cut(s) 99
BstAPI GCANNNNNTGC 1 cut(s) 741
BstAUI TGTACA 1 cut(s) 898
BstBAI YACGTR 1 cut(s) 8
BstDSI CCRYGG 1 cut(s) 2536
BstF5I GGATG 8 cut(s) 974, 1190, 1391, 1551, 2259, 2635, 2656, 2786
BstFNI CGCG 8 cut(s) 96, 115, 128, 149, 213, 221, 750, 2333
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 9 cut(s) 96, 101, 133, 149, 215, 221, 280, 320, 750
BstKTI GATC 9 cut(s) 162, 196, 784, 1189, 1888, 2085, 2270, 2344, 2671
BstMAI GTCTC 3 cut(s) 162, 1661, 2686
BstMBI GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
BstMCI CGRYCG 1 cut(s) 82
BstNI CCWGG 4 cut(s) 675, 1071, 1393, 2256
BstNSI RCATGY 2 cut(s) 1762, 2132
BstPAI GACNNNNGTC 1 cut(s) 1029
BstSCI CCNGG 7 cut(s) 404, 673, 1069, 1391, 2254, 2489, 2490
BstSFI CTRYAG 1 cut(s) 2640
BstSLI GKGCMC 2 cut(s) 618, 710
BstUI CGCG 8 cut(s) 96, 115, 128, 149, 213, 221, 750, 2333
BstV1I GCAGC 6 cut(s) 188, 1242, 1308, 1463, 1871, 2107
BstV2I GAAGAC 2 cut(s) 348, 2145
BstX2I RGATCY 2 cut(s) 2082, 2267
BstYI RGATCY 2 cut(s) 2082, 2267
BsuRI GGCC 3 cut(s) 105, 1777, 1804
BtgI CCRYGG 1 cut(s) 2536
BtgZI GCGATG 1 cut(s) 18
BtsCI GGATG 8 cut(s) 974, 1190, 1391, 1551, 2259, 2635, 2656, 2786
BtsI GCAGTG 1 cut(s) 616
BtuMI TCGCGA 1 cut(s) 2333
CaiI CAGNNNCTG 3 cut(s) 999, 2246, 2677
CciI TCATGA 1 cut(s) 1471
CfoI GCGC 9 cut(s) 96, 101, 133, 149, 215, 221, 280, 320, 750
Cfr10I RCCGGY 4 cut(s) 101, 215, 368, 1558
Cfr13I GGNCC 3 cut(s) 104, 402, 1961
Cfr9I CCCGGG 1 cut(s) 2490
CseI GACGC 1 cut(s) 134
Csp6I GTAC 5 cut(s) 670, 899, 955, 2593, 2680
CspAI ACCGGT 1 cut(s) 1558
CviAII CATG 8 cut(s) 1226, 1239, 1472, 1759, 2129, 2220, 2381, 2537
CviQI GTAC 5 cut(s) 670, 899, 955, 2593, 2680
DinI GGCGCC 1 cut(s) 100
DpnI GATC 9 cut(s) 161, 195, 783, 1188, 1887, 2084, 2269, 2343, 2670
DpnII GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
DriI GACNNNNNGTC 2 cut(s) 430, 1593
EaeI YGGCCR 2 cut(s) 1775, 1802
Eam1104I CTCTTC 6 cut(s) 134, 301, 503, 1989, 2114, 2871
Eam1105I GACNNNNNGTC 2 cut(s) 430, 1593
EarI CTCTTC 6 cut(s) 134, 301, 503, 1989, 2114, 2871
EciI GGCGGA 2 cut(s) 200, 327
Ecl136II GAGCTC 1 cut(s) 864
Eco130I CCWWGG 3 cut(s) 2536, 2732, 2910
Eco24I GRGCYC 2 cut(s) 866, 1120
Eco47I GGWCC 2 cut(s) 402, 1961
Eco53kI GAGCTC 1 cut(s) 864
Eco57I CTGAAG 4 cut(s) 2157, 2618, 2729, 2895
Eco88I CYCGRG 1 cut(s) 2490
EcoICRI GAGCTC 1 cut(s) 864
EcoRI GAATTC 1 cut(s) 1850
EcoRII CCWGG 4 cut(s) 673, 1069, 1391, 2254
EcoT14I CCWWGG 3 cut(s) 2536, 2732, 2910
EcoT22I ATGCAT 1 cut(s) 1764
EcoT38I GRGCYC 2 cut(s) 866, 1120
EgeI GGCGCC 1 cut(s) 100
EheI GGCGCC 1 cut(s) 100
ErhI CCWWGG 3 cut(s) 2536, 2732, 2910
FaeI CATG 8 cut(s) 1229, 1242, 1475, 1762, 2132, 2223, 2384, 2540
FalI AAGNNNNNCTT 2 cut(s) 554, 586
FaqI GGGAC 2 cut(s) 1974, 2567
FatI CATG 8 cut(s) 1225, 1238, 1471, 1758, 2128, 2219, 2380, 2536
FauI CCCGC 2 cut(s) 1744, 2770
FbaI TGATCA 1 cut(s) 2341
FblI GTMKAC 1 cut(s) 936
FokI GGATG 8 cut(s) 961, 1177, 1398, 1558, 2246, 2622, 2643, 2793
FriOI GRGCYC 2 cut(s) 866, 1120
FspBI CTAG 2 cut(s) 351, 1926
GlaI GCGC 9 cut(s) 95, 100, 132, 148, 214, 220, 279, 319, 749
GsaI CCCAGC 2 cut(s) 1147, 1699
GsuI CTGGAG 4 cut(s) 106, 504, 893, 1092
HaeII RGCGCY 1 cut(s) 102
HaeIII GGCC 3 cut(s) 105, 1777, 1804
HgaI GACGC 1 cut(s) 134
HhaI GCGC 9 cut(s) 96, 101, 133, 149, 215, 221, 280, 320, 750
Hin1I GRCGYC 1 cut(s) 99
Hin1II CATG 8 cut(s) 1229, 1242, 1475, 1762, 2132, 2223, 2384, 2540
Hin6I GCGC 9 cut(s) 94, 99, 131, 147, 213, 219, 278, 318, 748
HinP1I GCGC 9 cut(s) 94, 99, 131, 147, 213, 219, 278, 318, 748
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HindIII AAGCTT 2 cut(s) 23, 1104
Hpy166II GTNNAC 8 cut(s) 364, 382, 616, 899, 937, 2150, 2485, 2888
Hpy8I GTNNAC 8 cut(s) 364, 382, 616, 899, 937, 2150, 2485, 2888
Hpy99I CGWCG 1 cut(s) 213
HpyAV CCTTC 6 cut(s) 433, 460, 1543, 2170, 2436, 2444
HpyCH4III ACNGT 8 cut(s) 173, 457, 959, 1469, 1490, 1844, 1874, 2077
HpyCH4IV ACGT 4 cut(s) 7, 1255, 2529, 3002
HpySE526I ACGT 4 cut(s) 7, 1255, 2529, 3002
Hsp92I GRCGYC 1 cut(s) 99
Hsp92II CATG 8 cut(s) 1229, 1242, 1475, 1762, 2132, 2223, 2384, 2540
HspAI GCGC 9 cut(s) 94, 99, 131, 147, 213, 219, 278, 318, 748
KasI GGCGCC 1 cut(s) 98
Kpn2I TCCGGA 1 cut(s) 2290
KpnI GGTACC 1 cut(s) 673
KroI GCCGGC 3 cut(s) 101, 215, 368
KroNI GCCGGC 3 cut(s) 103, 217, 370
Ksp22I TGATCA 1 cut(s) 2341
Kzo9I GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
LguI GCTCTTC 3 cut(s) 134, 1989, 2114
LmnI GCTCC 4 cut(s) 87, 347, 567, 2728
Lsp1109I GCAGC 6 cut(s) 188, 1242, 1308, 1463, 1871, 2107
LweI GCATC 6 cut(s) 277, 1169, 2035, 2268, 2449, 2976
MaeI CTAG 2 cut(s) 351, 1926
MaeII ACGT 4 cut(s) 7, 1255, 2529, 3002
MalI GATC 9 cut(s) 161, 195, 783, 1188, 1887, 2084, 2269, 2343, 2670
MbiI CCGCTC 1 cut(s) 144
MboI GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
MfeI CAATTG 2 cut(s) 964, 1012
MflI RGATCY 2 cut(s) 2082, 2267
MhlI GDGCHC 5 cut(s) 618, 710, 866, 1120, 2215
MlsI TGGCCA 2 cut(s) 1777, 1804
MluNI TGGCCA 2 cut(s) 1777, 1804
Mly113I GGCGCC 1 cut(s) 99
MlyI GAGTC 6 cut(s) 59, 419, 422, 428, 440, 2668
MmeI TCCRAC 3 cut(s) 402, 414, 2505
Mox20I TGGCCA 2 cut(s) 1777, 1804
Mph1103I ATGCAT 1 cut(s) 1764
MreI CGCCGGCG 2 cut(s) 215, 368
MroI TCCGGA 1 cut(s) 2290
MroNI GCCGGC 3 cut(s) 101, 215, 368
MroXI GAANNNNTTC 1 cut(s) 2880
MscI TGGCCA 2 cut(s) 1777, 1804
MseI TTAA 9 cut(s) 518, 762, 792, 1719, 1787, 1793, 2585, 2628, 2870
MslI CAYNNNNRTG 3 cut(s) 2218, 2541, 2754
Msp20I TGGCCA 2 cut(s) 1777, 1804
MspA1I CMGCKG 4 cut(s) 84, 201, 592, 2777
MspR9I CCNGG 7 cut(s) 406, 675, 1071, 1393, 2256, 2491, 2492
MteI GCGCNGCGC 1 cut(s) 97
MunI CAATTG 2 cut(s) 964, 1012
Mva1269I GAATGC 4 cut(s) 706, 1233, 2107, 2476
MvaI CCWGG 4 cut(s) 675, 1071, 1393, 2256
MvnI CGCG 8 cut(s) 96, 115, 128, 149, 213, 221, 750, 2333
NaeI GCCGGC 3 cut(s) 103, 217, 370
NarI GGCGCC 1 cut(s) 99
NciI CCSGG 3 cut(s) 406, 2491, 2492
NcoI CCATGG 1 cut(s) 2536
NdeII GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
NgoMIV GCCGGC 3 cut(s) 101, 215, 368
NheI GCTAGC 1 cut(s) 350
NlaIII CATG 8 cut(s) 1229, 1242, 1475, 1762, 2132, 2223, 2384, 2540
NlaIV GGNNCC 8 cut(s) 100, 671, 1397, 1557, 1608, 1962, 2295, 2730
NmeAIII GCCGAG 1 cut(s) 797
NmuCI GTSAC 8 cut(s) 122, 578, 959, 1874, 1941, 2017, 2426, 2516
NruI TCGCGA 1 cut(s) 2333
NsiI ATGCAT 1 cut(s) 1764
NspI RCATGY 2 cut(s) 1762, 2132
PaeI GCATGC 1 cut(s) 1762
PagI TCATGA 1 cut(s) 1471
PasI CCCWGGG 1 cut(s) 674
PciSI GCTCTTC 3 cut(s) 134, 1989, 2114
PcsI WCGNNNNNNNCGW 3 cut(s) 45, 440, 461
PctI GAATGC 4 cut(s) 706, 1233, 2107, 2476
PdiI GCCGGC 3 cut(s) 103, 217, 370
PdmI GAANNNNTTC 1 cut(s) 2880
PflFI GACNNNGTC 1 cut(s) 2531
PinAI ACCGGT 1 cut(s) 1558
PleI GAGTC 6 cut(s) 59, 419, 421, 427, 439, 2668
PluTI GGCGCC 1 cut(s) 102
PpsI GAGTC 6 cut(s) 59, 419, 421, 427, 439, 2668
Ppu21I YACGTR 1 cut(s) 8
PshAI GACNNNNGTC 1 cut(s) 1029
PshBI ATTAAT 1 cut(s) 1719
Psp124BI GAGCTC 1 cut(s) 866
Psp6I CCWGG 4 cut(s) 673, 1069, 1391, 2254
PspFI CCCAGC 2 cut(s) 1143, 1695
PspGI CCWGG 4 cut(s) 673, 1069, 1391, 2254
PspN4I GGNNCC 8 cut(s) 100, 671, 1397, 1557, 1608, 1962, 2295, 2730
PspPI GGNCC 3 cut(s) 104, 402, 1961
PstNI CAGNNNCTG 3 cut(s) 999, 2246, 2677
PsuI RGATCY 2 cut(s) 2082, 2267
PsyI GACNNNGTC 1 cut(s) 2531
RruI TCGCGA 1 cut(s) 2333
RsaI GTAC 5 cut(s) 671, 900, 956, 2594, 2681
RsaNI GTAC 5 cut(s) 670, 899, 955, 2593, 2680
RseI CAYNNNNRTG 3 cut(s) 2218, 2541, 2754
SacI GAGCTC 1 cut(s) 866
SapI GCTCTTC 3 cut(s) 134, 1989, 2114
SaqAI TTAA 9 cut(s) 518, 762, 792, 1719, 1787, 1793, 2585, 2628, 2870
Sau3AI GATC 9 cut(s) 159, 193, 781, 1186, 1885, 2082, 2267, 2341, 2668
Sau96I GGNCC 3 cut(s) 104, 402, 1961
SchI GAGTC 6 cut(s) 59, 419, 422, 428, 440, 2668
ScrFI CCNGG 7 cut(s) 406, 675, 1071, 1393, 2256, 2491, 2492
SduI GDGCHC 5 cut(s) 618, 710, 866, 1120, 2215
SfaNI GCATC 6 cut(s) 277, 1169, 2035, 2268, 2449, 2976
SfcI CTRYAG 1 cut(s) 2640
SfoI GGCGCC 1 cut(s) 100
SgrAI CRCCGGYG 2 cut(s) 215, 368
SinI GGWCC 2 cut(s) 402, 1961
SmaI CCCGGG 1 cut(s) 2492
SmiMI CAYNNNNRTG 3 cut(s) 2218, 2541, 2754
SmlI CTYRAG 1 cut(s) 2852
SmoI CTYRAG 1 cut(s) 2852
SphI GCATGC 1 cut(s) 1762
SspDI GGCGCC 1 cut(s) 98
SspI AATATT 1 cut(s) 1723
SspMI CTAG 2 cut(s) 351, 1926
SstI GAGCTC 1 cut(s) 866
StyD4I CCNGG 7 cut(s) 404, 673, 1069, 1391, 2254, 2489, 2490
StyI CCWWGG 3 cut(s) 2536, 2732, 2910
TaaI ACNGT 8 cut(s) 173, 457, 959, 1469, 1490, 1844, 1874, 2077
TaiI ACGT 4 cut(s) 10, 1258, 2532, 3005
TaqI TCGA 3 cut(s) 39, 984, 2568
TaqII GACCGA 1 cut(s) 954
TatI WGTACW 3 cut(s) 898, 954, 2679
TauI GCSGC 7 cut(s) 73, 76, 99, 131, 147, 201, 234
Tru1I TTAA 9 cut(s) 518, 762, 792, 1719, 1787, 1793, 2585, 2628, 2870
Tru9I TTAA 9 cut(s) 518, 762, 792, 1719, 1787, 1793, 2585, 2628, 2870
TseFI GTSAC 8 cut(s) 122, 578, 959, 1874, 1941, 2017, 2426, 2516
TseI GCWGC 6 cut(s) 201, 1230, 1321, 1451, 1859, 2095
Tsp45I GTSAC 8 cut(s) 122, 578, 959, 1874, 1941, 2017, 2426, 2516
TspDTI ATGAA 8 cut(s) 152, 518, 1331, 1562, 1843, 2175, 2289, 2645
TspGWI ACGGA 2 cut(s) 360, 2403
TspMI CCCGGG 1 cut(s) 2490
Tth111I GACNNNGTC 1 cut(s) 2531
VneI GTGCAC 1 cut(s) 614
VpaK11BI GGWCC 2 cut(s) 402, 1961
VspI ATTAAT 1 cut(s) 1719
XapI RAATTY 4 cut(s) 41, 1295, 1850, 2615
XceI RCATGY 2 cut(s) 1762, 2132
XmaI CCCGGG 1 cut(s) 2490
XmiI GTMKAC 1 cut(s) 936
XmnI GAANNNNTTC 1 cut(s) 2880
XspI CTAG 2 cut(s) 351, 1926
Zsp2I ATGCAT 1 cut(s) 1764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.