Rh1BG252900
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0002674
Physical Location & Seq
Reverse (-)
38170909 .. 38179633
8725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG252900.1

Sequence Viewer

Length: 3093 bp
ATGGAATCATCGCCGCCGCACGACCGCCGGTGCAAGCGCGTCTCCGGCCCGAAGTCGCGGCCCGGCGAGCTCAAGAGCAACGGGGATAAGAAGATCAAGAGAGACAGTGAAGTGGTGGAGGAGGATCGCCGCTGCAACCGCCGCGCCGGAGCGTGGCGGTGCGGCGAGGCGGCGGCGGTTGGGAAGCCGATGTGTCGACATCACTTGGCGCAGAGCAAGAGTTACCAGGAGAGGAAGAAAAAGAGAGAGGGAGGCGGAGACAGTGATTCCGGCGAAGAAGACGGACGTGACCGGAAAATCAACGCCGGCGGATCGGAGAATAAGAAGAAGAAGAAGAAGAGGAGGAGGACCGCGAGTGAGTCTGAGTCTGAGTCGGAGTCGGAGCACAGGTCGAGGAATCGGACTGTGAAAGCGAAGGTGAATGGTAAATCTGCAGATTCCGGTAGTGTTATGAAGAAGAGTAAACTGAAAGAGGAAGAGCCAATGGAAGAGGGTAAGTCTAACAAAATCAAGGGGAGCTTGATGTGTCACCAGTGTCAGCGGAACGATAAGAGTGGTGTTGTACACTGCTCTCTGTGTAAATCAAAGCGGTTTTGCTATGAGTGCATTGAAAGATGGTACCCTGGGAAATCAAGAGAGGAATTTGAGGATGCTTGCCCATTTTGCCGTGGCAACTGCAACTGCAAAGCGTGCCTGCGCGAGTTTTTGGTTAAACCTTGCCGAGAAGTTGAGCCCAGTGTTAAGTTACAGCAACTGCGTTACCTGTTATATAAGGCTTTGCCTGTGCTGAGGCATTTATATAGTGAGCAGAGCTCTGAACTGGAGATAGAAGCCAAAATCAGAGGTGCACACTTGACTGAAATGGACATAAAGAGAACTAAAGTACACCAAAAGGAGCGAATGTACTGTGACAATTGTTCTACATCTATTGTGGATTTCCACAGAAGCTGTCCAAACCCCAATTGTTCCTATGACCTGTGTCTTACTTGTTGCAAAGAGCTAAGGGACGGTCGGCAACCTGGAGGTAATGAAGGAGAAACATCTCACCAGCAAGCTCTAGAAAGAGCTCATAAAGAAGTGAAAGGACGTTGCTGGGAGAGTAAAGTTGCCTCTACTTCTGAAGATTCTAAAGTGGAACCATCCATTTCTTTTCTTAATTGGAGAGCTGATTCTGATGGCAGTATTCCATGCCCTCCAAAAGAACGTGGAGGTTGTGGCAATGGGAAGCTGGAATTGAGGCGTAAATTCAAAGCTAATTGGGTAATGAAGCTGCTAAAAAATGCAGAAGATGTTACTACTGACTTCAAGTGGCAAGAAGTTGATATTTCTCAAGGATGTTCCTGGTGCCAGCCAAATGATTTCGAGGAAACCAATGATAGGAAGCCTGAAAGGAGGCAAGCAGCTTTCAGGAAAAACAGTCATGATAACTTCTTATACTGTCCAGATGCTATTGACATTTCAGATGATGAGATCGAGCATTTTCAGAGGCACTGGATGAAAGGGGAACCAGTGATTGTCAGAAATGTTCTTGACAAGACATCTGGTCTTAGTTGGGAACCTATGGTTATGTGGAGGGCTTTTAGAGAAACGGGTGCTAAAGTAAAGTTCAAAGAGGAGACTAAAAGTGTAAAAGCCATTGATTGCTTGGATTGGAATGAGGTTGAGATTAATATTCACCAATTTTTCACGGGCTACTTAGCGGGTCGCATGCATAAAGATAAGTGGCCAGAGATGTTAAAATTAAAGGATTGGCCATCATCAACTTTGTTTGAGGAACGCTTGCCAAGACACTGTGCGGAATTCATTGCAGCGCTCCCCTACAGTGACTATACTGATCCCAAAGATTCAAATGCTGGTATTCTCAATCTTGCTACAAGACTTCCTGAAGGGTCGCTGAAACCTGATATGGGACCAAAAACATACATTGCTTATGGATTCTCCGAAGAGCTTGGTAGAGGTGATTCAGTGACTAAGCTGCACTGTGATATGTCTGATGCGGTAAATGTTCTGACACACACAGCAACAGTGAAGATTGAGCCGTGGCAGCACAATGCCATAAAGAATTTGAAGAGCAAACATGAAGCTGAAGACCTTTGTGAACTCTACAATGAAAAAAATCACAAAAAGGGCAGGGTTAGAGGAACATTGTTGAAGAAAACTCGCAACGTCCTGGTTAAGGGTGCTGATTCTTCTGAATATACTAAAAGTGGTAAAGTTGTGGAGAATGACCATCTAGTGTCAACTCTGCAGGATGGGAAGGGAAACAAACTGGACAGAGCACAATCATGTAGAACTTCACTTTTGTCAGATTCTGTCGATCCAGGCATCCTTAGATCTGATGAAACAGAATATGTTCCGGAACCTCTTGCTACTACTGAACTAAATGAAGTAAAGGTTGCGAGTGTTGATCATCAGAGGAATGATGTGCTAAAATCCACCTCGCCTCGTGCAAATGGAGTTGAAAAAGAGCAAGAGCATGTTCAATGTTCCAGTGACATGATCAGTGGAAGGCTTGAAGGGAAAGATGCTTCAAGGGATGCAAGTGTAAACACGCATGCAACAAAGGATTTCAAAGGTAGTGACAAGTTGGACATTGTCCATGGTGGTGCTGTTTGGGACATCTTTCGTATCCAGGACACTCCCAAGTTAATAGAGTACCTGGAGAAACACAAAAAAGATTTTCGCCACCTTAATAATCATCCTGTAGATTCTGTTGTTCATCCTATTCATGATCAGACTCTGTACTTGAATGAGAGACATAAGAAACAACTAAAGGAGGAGTTTGATGTGGAGCCTTGGACATTTGAGCAACATCTTGGTGAGGCAGTTTTTATTCCAGCTGGATGTCCTCATCAAGTGAGAAATAGACAATCTTGTATAAAGGTAGCACTTGATTTTGTATCTCCTGAGAATCTTGAAGTATGTCTGCGATTAACTGAAGAGTTCCGTTTACTCCCAAAAACCCACAGAGCCAAGGAAGATAAATTGGAGGTGAAGAAGATGACACTCTATGCTGTAAGTTCAGCACTGCGAGAAGCCAAAAATTTGATGCTGGGGCTTGGAACGTCAAATGCAGAGAAAGATGACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC WRC zf-4CXXC_R1

Protein Analysis

1030

Amino Acids

117.52

Weight (kDa)

8.54

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 870 - 966 1.1e-14 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 618
AccB1I GGYRCC 2 cut(s) 618, 1344
AccI GTMKAC 1 cut(s) 196
AccII CGCG 5 cut(s) 39, 58, 144, 353, 699
AccIII TCCGGA 1 cut(s) 2356
AclWI GGATC 4 cut(s) 132, 319, 1829, 2312
AcoI YGGCCR 2 cut(s) 1724, 1751
AcsI RAATTY 5 cut(s) 641, 1244, 1799, 2062, 3043
AcuI CTGAAG 4 cut(s) 1140, 1905, 2106, 2958
AfaI GTAC 6 cut(s) 564, 620, 885, 905, 2657, 2744
AfeI AGCGCT 1 cut(s) 1812
AfiI CCNNNNNNNGG 4 cut(s) 153, 1377, 1907, 2176
AhdI GACNNNNNGTC 1 cut(s) 1542
AjiI CACGTC 1 cut(s) 287
AjnI CCWGG 8 cut(s) 225, 622, 1018, 1340, 2169, 2320, 2631, 2658
Alw21I GWGCWC 6 cut(s) 72, 387, 815, 850, 1069, 2281
Alw26I GTCTC 5 cut(s) 46, 96, 252, 1610, 2749
Alw44I GTGCAC 1 cut(s) 846
AlwI GGATC 4 cut(s) 132, 319, 1829, 2312
AlwNI CAGNNNCTG 4 cut(s) 754, 948, 2312, 2740
Aor13HI TCCGGA 1 cut(s) 2356
Aor51HI AGCGCT 1 cut(s) 1812
AoxI GGCC 4 cut(s) 46, 59, 1724, 1751
ApaLI GTGCAC 1 cut(s) 846
ApeKI GCWGC 6 cut(s) 132, 1270, 1400, 1808, 1975, 2044
ApoI RAATTY 5 cut(s) 641, 1244, 1799, 2062, 3043
AseI ATTAAT 1 cut(s) 1668
Asp700I GAANNNNTTC 1 cut(s) 2352
Asp718I GGTACC 1 cut(s) 618
AspLEI GCGC 5 cut(s) 39, 146, 211, 699, 1813
AspS9I GGNCC 4 cut(s) 47, 60, 348, 1910
AsuC2I CCSGG 1 cut(s) 63
AsuHPI GGTGA 7 cut(s) 430, 521, 1037, 1667, 1970, 2831, 3004
AvaII GGWCC 2 cut(s) 348, 1910
BaeGI GKGCMC 1 cut(s) 850
BalI TGGCCA 2 cut(s) 1726, 1753
BanI GGYRCC 2 cut(s) 618, 1344
BanII GRGCYC 4 cut(s) 72, 735, 815, 1069
BauI CACGAG 1 cut(s) 2445
BbsI GAAGAC 2 cut(s) 285, 2094
Bbv12I GWGCWC 6 cut(s) 72, 387, 815, 850, 1069, 2281
BbvCI CCTCAGC 1 cut(s) 788
BbvI GCAGC 6 cut(s) 119, 1257, 1412, 1820, 1962, 2056
BccI CCATC 6 cut(s) 609, 1147, 1169, 1762, 2238, 2246
BceAI ACGGC 2 cut(s) 651, 2023
BciT130I CCWGG 8 cut(s) 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
BciVI GTATCC 1 cut(s) 2639
BclI TGATCA 3 cut(s) 2407, 2499, 2731
BcnI CCSGG 1 cut(s) 63
BcoDI GTCTC 5 cut(s) 46, 96, 252, 1610, 2749
BfaI CTAG 2 cut(s) 1058, 2234
BfmI CTRYAG 4 cut(s) 432, 1819, 2246, 2703
BfoI RGCGCY 1 cut(s) 1814
BfuI GTATCC 1 cut(s) 2639
BglII AGATCT 1 cut(s) 2333
Bme1390I CCNGG 9 cut(s) 63, 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
Bme18I GGWCC 2 cut(s) 348, 1910
BmeRI GACNNNNNGTC 1 cut(s) 1542
BmgBI CACGTC 1 cut(s) 287
BmgT120I GGNCC 4 cut(s) 47, 60, 348, 1910
BmiI GGNNCC 8 cut(s) 620, 1137, 1346, 1506, 1557, 1911, 2361, 2793
BmrFI CCNGG 9 cut(s) 63, 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
BmrI ACTGGG 1 cut(s) 729
BmsI GCATC 7 cut(s) 640, 1435, 1984, 2334, 2515, 2527, 3039
BmuI ACTGGG 1 cut(s) 729
BoxI GACNNNNGTC 1 cut(s) 978
BpiI GAAGAC 2 cut(s) 285, 2094
BplI GAGNNNNNCTC 2 cut(s) 797, 829
BpmI CTGGAG 3 cut(s) 842, 1041, 2681
Bpu10I CCTNAGC 2 cut(s) 788, 1001
BpuEI CTTGAG 2 cut(s) 56, 1314
BpuMI CCSGG 1 cut(s) 63
BsaJI CCNNGG 7 cut(s) 622, 623, 667, 2039, 2599, 2795, 2973
BsaWI WCCGGW 3 cut(s) 291, 440, 2356
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 887, 917
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 1377, 1907, 2176
Bse118I RCCGGY 2 cut(s) 27, 305
Bse1I ACTGG 7 cut(s) 532, 735, 825, 1496, 1508, 2274, 2490
Bse3DI GCAATG 3 cut(s) 1225, 1803, 1923
BseAI TCCGGA 1 cut(s) 2356
BseBI CCWGG 8 cut(s) 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
BseDI CCNNGG 7 cut(s) 622, 623, 667, 2039, 2599, 2795, 2973
BseLI CCNNNNNNNGG 4 cut(s) 153, 1377, 1907, 2176
BseMI GCAATG 3 cut(s) 1225, 1803, 1923
BseMII CTCAG 4 cut(s) 354, 360, 779, 2898
BseNI ACTGG 7 cut(s) 532, 735, 825, 1496, 1508, 2274, 2490
BseRI GAGGAG 5 cut(s) 134, 355, 358, 1628, 2792
BseSI GKGCMC 1 cut(s) 850
BseXI GCAGC 6 cut(s) 119, 1257, 1412, 1820, 1962, 2056
BseYI CCCAGC 2 cut(s) 1092, 3052
BsgI GTGCAG 1 cut(s) 1961
Bsh1236I CGCG 5 cut(s) 39, 58, 144, 353, 699
Bsh1285I CGRYCG 2 cut(s) 25, 1012
BshFI GGCC 4 cut(s) 48, 61, 1726, 1753
BshNI GGYRCC 2 cut(s) 618, 1344
BsiEI CGRYCG 2 cut(s) 25, 1012
BsiHKAI GWGCWC 6 cut(s) 72, 387, 815, 850, 1069, 2281
BsiSI CCGG 9 cut(s) 28, 45, 63, 147, 270, 292, 306, 441, 2357
BslFI GGGAC 3 cut(s) 1019, 1923, 2630
BslI CCNNNNNNNGG 4 cut(s) 153, 1377, 1907, 2176
BsmAI GTCTC 5 cut(s) 46, 96, 252, 1610, 2749
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 3 cut(s) 1019, 1923, 2630
BsnI GGCC 4 cut(s) 48, 61, 1726, 1753
Bsp1286I GDGCHC 7 cut(s) 72, 387, 735, 815, 850, 1069, 2281
Bsp13I TCCGGA 1 cut(s) 2356
Bsp1407I TGTACA 1 cut(s) 562
Bsp19I CCATGG 1 cut(s) 2599
BspANI GGCC 4 cut(s) 48, 61, 1726, 1753
BspCNI CTCAG 4 cut(s) 355, 361, 780, 2899
BspEI TCCGGA 1 cut(s) 2356
BspFNI CGCG 5 cut(s) 39, 58, 144, 353, 699
BspHI TCATGA 2 cut(s) 1420, 2728
BspLI GGNNCC 8 cut(s) 620, 1137, 1346, 1506, 1557, 1911, 2361, 2793
BspMAI CTGCAG 2 cut(s) 436, 2250
BspPI GGATC 4 cut(s) 132, 319, 1829, 2312
BspQI GCTCTTC 3 cut(s) 471, 1938, 2063
BspT107I GGYRCC 2 cut(s) 618, 1344
BsrDI GCAATG 3 cut(s) 1225, 1803, 1923
BsrFI RCCGGY 2 cut(s) 27, 305
BsrGI TGTACA 1 cut(s) 562
BsrI ACTGG 7 cut(s) 532, 735, 825, 1496, 1508, 2274, 2490
BssAI RCCGGY 2 cut(s) 27, 305
BssECI CCNNGG 7 cut(s) 622, 623, 667, 2039, 2599, 2795, 2973
BssSI CACGAG 1 cut(s) 2445
BssT1I CCWWGG 3 cut(s) 2599, 2795, 2973
Bst2BI CACGAG 1 cut(s) 2445
Bst2UI CCWGG 8 cut(s) 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
Bst6I CTCTTC 7 cut(s) 332, 452, 471, 483, 1938, 2063, 2934
BstAPI GCANNNNNTGC 1 cut(s) 690
BstAUI TGTACA 1 cut(s) 562
BstDEI CTNAG 9 cut(s) 363, 369, 788, 1001, 1547, 1696, 1971, 2330, 2907
BstDSI CCRYGG 3 cut(s) 667, 2039, 2599
BstENI CCTNNNNNAGG 1 cut(s) 2174
BstFNI CGCG 5 cut(s) 39, 58, 144, 353, 699
BstH2I RGCGCY 1 cut(s) 1814
BstHHI GCGC 5 cut(s) 39, 146, 211, 699, 1813
BstMAI GTCTC 5 cut(s) 46, 96, 252, 1610, 2749
BstMCI CGRYCG 2 cut(s) 25, 1012
BstMWI GCNNNNNNNGC 8 cut(s) 45, 67, 138, 141, 603, 663, 690, 2044
BstNI CCWGG 8 cut(s) 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
BstNSI RCATGY 3 cut(s) 1711, 2480, 2558
BstPAI GACNNNNGTC 1 cut(s) 978
BstSCI CCNGG 9 cut(s) 61, 225, 622, 1018, 1340, 2169, 2320, 2631, 2658
BstSFI CTRYAG 4 cut(s) 432, 1819, 2246, 2703
BstSLI GKGCMC 1 cut(s) 850
BstUI CGCG 5 cut(s) 39, 58, 144, 353, 699
BstV1I GCAGC 6 cut(s) 119, 1257, 1412, 1820, 1962, 2056
BstV2I GAAGAC 2 cut(s) 285, 2094
BstX2I RGATCY 1 cut(s) 2333
BstYI RGATCY 1 cut(s) 2333
BsuI GTATCC 1 cut(s) 2639
BsuRI GGCC 4 cut(s) 48, 61, 1726, 1753
BtgI CCRYGG 3 cut(s) 667, 2039, 2599
BtrI CACGTC 1 cut(s) 287
BtsI GCAGTG 2 cut(s) 565, 3026
CaiI CAGNNNCTG 4 cut(s) 754, 948, 2312, 2740
CciI TCATGA 2 cut(s) 1420, 2728
CfoI GCGC 5 cut(s) 39, 146, 211, 699, 1813
Cfr10I RCCGGY 2 cut(s) 27, 305
Cfr13I GGNCC 4 cut(s) 47, 60, 348, 1910
CseI GACGC 1 cut(s) 28
Csp6I GTAC 6 cut(s) 563, 619, 884, 904, 2656, 2743
CviQI GTAC 6 cut(s) 563, 619, 884, 904, 2656, 2743
DdeI CTNAG 9 cut(s) 363, 369, 788, 1001, 1547, 1696, 1971, 2330, 2907
DriI GACNNNNNGTC 1 cut(s) 1542
EaeI YGGCCR 2 cut(s) 1724, 1751
Eam1104I CTCTTC 7 cut(s) 332, 452, 471, 483, 1938, 2063, 2934
Eam1105I GACNNNNNGTC 1 cut(s) 1542
EarI CTCTTC 7 cut(s) 332, 452, 471, 483, 1938, 2063, 2934
EciI GGCGGA 2 cut(s) 270, 324
Ecl136II GAGCTC 3 cut(s) 70, 813, 1067
Eco130I CCWWGG 3 cut(s) 2599, 2795, 2973
Eco24I GRGCYC 4 cut(s) 72, 735, 815, 1069
Eco47I GGWCC 2 cut(s) 348, 1910
Eco47III AGCGCT 1 cut(s) 1812
Eco53kI GAGCTC 3 cut(s) 70, 813, 1067
Eco57I CTGAAG 4 cut(s) 1140, 1905, 2106, 2958
EcoICRI GAGCTC 3 cut(s) 70, 813, 1067
EcoNI CCTNNNNNAGG 1 cut(s) 2174
EcoRI GAATTC 1 cut(s) 1799
EcoRII CCWGG 8 cut(s) 225, 622, 1018, 1340, 2169, 2320, 2631, 2658
EcoT14I CCWWGG 3 cut(s) 2599, 2795, 2973
EcoT22I ATGCAT 1 cut(s) 1713
EcoT38I GRGCYC 4 cut(s) 72, 735, 815, 1069
ErhI CCWWGG 3 cut(s) 2599, 2795, 2973
Esp3I CGTCTC 1 cut(s) 46
FalI AAGNNNNNCTT 2 cut(s) 503, 535
FaqI GGGAC 3 cut(s) 1019, 1923, 2630
FauI CCCGC 1 cut(s) 1693
FbaI TGATCA 3 cut(s) 2407, 2499, 2731
FblI GTMKAC 1 cut(s) 196
FriOI GRGCYC 4 cut(s) 72, 735, 815, 1069
FspBI CTAG 2 cut(s) 1058, 2234
GlaI GCGC 5 cut(s) 38, 145, 210, 698, 1812
GsaI CCCAGC 2 cut(s) 1096, 3056
GsuI CTGGAG 3 cut(s) 842, 1041, 2681
HaeII RGCGCY 1 cut(s) 1814
HaeIII GGCC 4 cut(s) 48, 61, 1726, 1753
HapII CCGG 9 cut(s) 28, 45, 63, 147, 270, 292, 306, 441, 2357
HgaI GACGC 1 cut(s) 28
HhaI GCGC 5 cut(s) 39, 146, 211, 699, 1813
Hin6I GCGC 5 cut(s) 37, 144, 209, 697, 1811
HinP1I GCGC 5 cut(s) 37, 144, 209, 697, 1811
HincII GTYRAC 2 cut(s) 197, 2241
HindII GTYRAC 2 cut(s) 197, 2241
HpaII CCGG 9 cut(s) 28, 45, 63, 147, 270, 292, 306, 441, 2357
HphI GGTGA 7 cut(s) 430, 521, 1037, 1667, 1970, 2831, 3004
Hpy166II GTNNAC 9 cut(s) 197, 464, 565, 848, 886, 2099, 2241, 2548, 2951
Hpy8I GTNNAC 9 cut(s) 197, 464, 565, 848, 886, 2099, 2241, 2548, 2951
HpyAV CCTTC 6 cut(s) 409, 1025, 1880, 2251, 2502, 2510
HpyCH4IV ACGT 5 cut(s) 286, 1087, 1204, 2166, 3065
HpyF10VI GCNNNNNNNGC 8 cut(s) 45, 67, 138, 141, 603, 663, 690, 2044
HpyF3I CTNAG 9 cut(s) 363, 369, 788, 1001, 1547, 1696, 1971, 2330, 2907
HpySE526I ACGT 5 cut(s) 286, 1087, 1204, 2166, 3065
HspAI GCGC 5 cut(s) 37, 144, 209, 697, 1811
Kpn2I TCCGGA 1 cut(s) 2356
KpnI GGTACC 1 cut(s) 622
KroI GCCGGC 1 cut(s) 305
KroNI GCCGGC 1 cut(s) 307
Ksp22I TGATCA 3 cut(s) 2407, 2499, 2731
LguI GCTCTTC 3 cut(s) 471, 1938, 2063
LmnI GCTCC 6 cut(s) 149, 382, 516, 895, 1818, 2791
Lsp1109I GCAGC 6 cut(s) 119, 1257, 1412, 1820, 1962, 2056
LweI GCATC 7 cut(s) 640, 1435, 1984, 2334, 2515, 2527, 3039
MaeI CTAG 2 cut(s) 1058, 2234
MaeII ACGT 5 cut(s) 286, 1087, 1204, 2166, 3065
MfeI CAATTG 2 cut(s) 913, 961
MflI RGATCY 1 cut(s) 2333
MhlI GDGCHC 7 cut(s) 72, 387, 735, 815, 850, 1069, 2281
MlsI TGGCCA 2 cut(s) 1726, 1753
MluNI TGGCCA 2 cut(s) 1726, 1753
MlyI GAGTC 5 cut(s) 368, 374, 380, 386, 2731
MmeI TCCRAC 3 cut(s) 354, 360, 2568
Mox20I TGGCCA 2 cut(s) 1726, 1753
Mph1103I ATGCAT 1 cut(s) 1713
MreI CGCCGGCG 1 cut(s) 305
MroI TCCGGA 1 cut(s) 2356
MroNI GCCGGC 1 cut(s) 305
MroXI GAANNNNTTC 1 cut(s) 2352
MscI TGGCCA 2 cut(s) 1726, 1753
MslI CAYNNNNRTG 3 cut(s) 2284, 2604, 2817
Msp20I TGGCCA 2 cut(s) 1726, 1753
MspA1I CMGCKG 3 cut(s) 132, 541, 2840
MspI CCGG 9 cut(s) 28, 45, 63, 147, 270, 292, 306, 441, 2357
MspR9I CCNGG 9 cut(s) 63, 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
MunI CAATTG 2 cut(s) 913, 961
MvaI CCWGG 8 cut(s) 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
MvnI CGCG 5 cut(s) 39, 58, 144, 353, 699
MwoI GCNNNNNNNGC 8 cut(s) 45, 67, 138, 141, 603, 663, 690, 2044
NaeI GCCGGC 1 cut(s) 307
NciI CCSGG 1 cut(s) 63
NcoI CCATGG 1 cut(s) 2599
NgoMIV GCCGGC 1 cut(s) 305
NlaIV GGNNCC 8 cut(s) 620, 1137, 1346, 1506, 1557, 1911, 2361, 2793
NmeAIII GCCGAG 1 cut(s) 746
NmuCI GTSAC 7 cut(s) 287, 527, 908, 1823, 1966, 2492, 2579
NsiI ATGCAT 1 cut(s) 1713
NspI RCATGY 3 cut(s) 1711, 2480, 2558
PaeI GCATGC 2 cut(s) 1711, 2558
PagI TCATGA 2 cut(s) 1420, 2728
PasI CCCWGGG 1 cut(s) 623
PciSI GCTCTTC 3 cut(s) 471, 1938, 2063
PdiI GCCGGC 1 cut(s) 307
PdmI GAANNNNTTC 1 cut(s) 2352
PflFI GACNNNGTC 1 cut(s) 2594
PfoI TCCNGGA 1 cut(s) 2631
PleI GAGTC 5 cut(s) 367, 373, 379, 385, 2731
PpsI GAGTC 5 cut(s) 367, 373, 379, 385, 2731
PshAI GACNNNNGTC 1 cut(s) 978
PshBI ATTAAT 1 cut(s) 1668
Psp124BI GAGCTC 3 cut(s) 72, 815, 1069
Psp6I CCWGG 8 cut(s) 225, 622, 1018, 1340, 2169, 2320, 2631, 2658
PspFI CCCAGC 2 cut(s) 1092, 3052
PspGI CCWGG 8 cut(s) 225, 622, 1018, 1340, 2169, 2320, 2631, 2658
PspN4I GGNNCC 8 cut(s) 620, 1137, 1346, 1506, 1557, 1911, 2361, 2793
PspPI GGNCC 4 cut(s) 47, 60, 348, 1910
PstI CTGCAG 2 cut(s) 436, 2250
PstNI CAGNNNCTG 4 cut(s) 754, 948, 2312, 2740
PsuI RGATCY 1 cut(s) 2333
PsyI GACNNNGTC 1 cut(s) 2594
PvuII CAGCTG 1 cut(s) 2840
RsaI GTAC 6 cut(s) 564, 620, 885, 905, 2657, 2744
RsaNI GTAC 6 cut(s) 563, 619, 884, 904, 2656, 2743
RseI CAYNNNNRTG 3 cut(s) 2284, 2604, 2817
SacI GAGCTC 3 cut(s) 72, 815, 1069
SalI GTCGAC 1 cut(s) 195
SapI GCTCTTC 3 cut(s) 471, 1938, 2063
Sau96I GGNCC 4 cut(s) 47, 60, 348, 1910
SchI GAGTC 5 cut(s) 368, 374, 380, 386, 2731
ScrFI CCNGG 9 cut(s) 63, 227, 624, 1020, 1342, 2171, 2322, 2633, 2660
SduI GDGCHC 7 cut(s) 72, 387, 735, 815, 850, 1069, 2281
SfaNI GCATC 7 cut(s) 640, 1435, 1984, 2334, 2515, 2527, 3039
SfcI CTRYAG 4 cut(s) 432, 1819, 2246, 2703
SgrAI CRCCGGYG 2 cut(s) 27, 305
SinI GGWCC 2 cut(s) 348, 1910
SmiMI CAYNNNNRTG 3 cut(s) 2284, 2604, 2817
SmlI CTYRAG 2 cut(s) 71, 1329
SmoI CTYRAG 2 cut(s) 71, 1329
SphI GCATGC 2 cut(s) 1711, 2558
SspI AATATT 1 cut(s) 1672
SspMI CTAG 2 cut(s) 1058, 2234
SstI GAGCTC 3 cut(s) 72, 815, 1069
StyD4I CCNGG 9 cut(s) 61, 225, 622, 1018, 1340, 2169, 2320, 2631, 2658
StyI CCWWGG 3 cut(s) 2599, 2795, 2973
TaiI ACGT 5 cut(s) 289, 1090, 1207, 2169, 3068
TaqI TCGA 5 cut(s) 196, 392, 1362, 1473, 2316
TatI WGTACW 4 cut(s) 562, 883, 903, 2742
TauI GCSGC 8 cut(s) 16, 19, 61, 132, 144, 165, 173, 176
TseFI GTSAC 7 cut(s) 287, 527, 908, 1823, 1966, 2492, 2579
TseI GCWGC 6 cut(s) 132, 1270, 1400, 1808, 1975, 2044
Tsp45I GTSAC 7 cut(s) 287, 527, 908, 1823, 1966, 2492, 2579
TspGWI ACGGA 2 cut(s) 297, 2936
Tth111I GACNNNGTC 1 cut(s) 2594
VneI GTGCAC 1 cut(s) 846
VpaK11BI GGWCC 2 cut(s) 348, 1910
VspI ATTAAT 1 cut(s) 1668
XagI CCTNNNNNAGG 1 cut(s) 2174
XapI RAATTY 5 cut(s) 641, 1244, 1799, 2062, 3043
XbaI TCTAGA 1 cut(s) 1057
XceI RCATGY 3 cut(s) 1711, 2480, 2558
XcmI CCANNNNNNNNNTGG 1 cut(s) 1642
XmiI GTMKAC 1 cut(s) 196
XmnI GAANNNNTTC 1 cut(s) 2352
XspI CTAG 2 cut(s) 1058, 2234
Zsp2I ATGCAT 1 cut(s) 1713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.