FvH4_7g18320

mRNA cap guanine-N7 methyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
15310408 .. 15313533
3126 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18320.t3

Sequence Viewer

Length: 1116 bp
ATGATGATGCTGCCCCAACACCCGGCGGCGCCGAGAGCCGACTCGCCTCACAATCGACTCTACGAGTTCGCCAAAGCTGCCCTCATTAAAATCTTCGTCCACCCATACGCTTCGGTGTGTGAGTTGTACTGTGGCAGCGGAGGAGTCGACGCCGAGAAATGGGACGAGGCCCAAATCGGTCACTACATTGGAATTGATGTTTCGACGTCCGGTATAAGACAGAAAAGAGAAGCATGGGAGAGCCAGAGGAAGGGTTACACTGCTGACTTCTTTGAGCTTGACCCCTGCATGGAAGATATAGAGCCACATCTGAATGAGGAAACCGTTCTGGCTGATTTAGTTTGCTGCTTGCAGAATTTGCAGCTGTGTTTCCAAACTGAAGAGAAAGCAAGGAGGCTCTTGTTAAATGTGTCAGCCTTACTGAAGCCAGGGGGTTATTTTTTTGGTATTACTCCTGACTCATCTACAATATGGGCAAAGTACCAGAAGAATGTGGAAGCATACCACAACAGAAGTGCTGGCATGAAACCAAACATCGTTCCCAACTGCATTAGATCAGAGAACTATGTGATCACTTTTGAAATCGAGGAAGAGAAGTTCCCCTTATTCGGAAAGAAGTACCTGTTAAAATTGGCTAATGATCTCCCTCCGGAAACCCATTGCTTGGTTCATTTCCCTAGCTTCATTAGGTTAGCCAGAGAAGCTGGTCTCGAGTATGTGGAGATTCAAAATCTAACTGAATTTTACGATGACAACAGAGCACACTTTGCAGGCATGCTAATGAATTTTGGTCCAAACCTTGCTGATCCTAGAGGCAGACTTCTTCCTCGATCATATGATGTGTTAGGTCTCTATACCACATTTATATTTCACAAGCCAGACCCTGATATTGCTCCTCCAATTATGACACCAGTGCAGGATGCCCCACACATTATTGATGAGAAAGAGTGGCAAGGAACCCTCTGGAGAGATGATGATAAGAGTGCAGTAGAGCCGCCTCCTCTTCCCGGCCTAGGGAAGATCAGTGAGCAAAAAGGGATTTTGGGCCCTGGCCCTGCTGAGTTGCGTTTTGCCGAGCCACTTGACCTGGTGGTTGTTGCAAGCAAGAAGCATTAG

Protein Analysis

372

Amino Acids

41.96

Weight (kDa)

5.36

Isoelectric Point (pI)

46.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mRNA_G-N7_MeTrfase PF03291 4 - 196 2.5e-21 mRNA (guanine-N(7))-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 664
AccI GTMKAC 1 cut(s) 147
AccIII TCCGGA 1 cut(s) 649
AciI CCGC 3 cut(s) 26, 138, 995
AclWI GGATC 1 cut(s) 800
AcsI RAATTY 3 cut(s) 355, 740, 784
AcuI CTGAAG 2 cut(s) 399, 443
AcyI GRCGYC 3 cut(s) 29, 150, 206
AfaI GTAC 3 cut(s) 128, 482, 620
AfiI CCNNNNNNNGG 9 cut(s) 22, 159, 250, 289, 608, 664, 1007, 1013, 1014
AgsI TTSAA 2 cut(s) 581, 728
AjnI CCWGG 3 cut(s) 427, 1048, 1086
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
AluBI AGCT 5 cut(s) 77, 277, 364, 681, 704
AluI AGCT 5 cut(s) 77, 277, 364, 681, 704
Alw21I GWGCWC 1 cut(s) 763
Alw26I GTCTC 2 cut(s) 713, 854
AlwI GGATC 1 cut(s) 800
AlwNI CAGNNNCTG 1 cut(s) 884
Ama87I CYCGRG 1 cut(s) 710
Aor13HI TCCGGA 1 cut(s) 649
AoxI GGCC 4 cut(s) 168, 1009, 1045, 1051
ApaI GGGCCC 1 cut(s) 1049
ApeKI GCWGC 5 cut(s) 10, 77, 135, 345, 361
ApoI RAATTY 3 cut(s) 355, 740, 784
Asp700I GAANNNNTTC 1 cut(s) 324
AspA2I CCTAGG 1 cut(s) 1012
AspLEI GCGC 1 cut(s) 31
AspS9I GGNCC 5 cut(s) 169, 791, 1045, 1046, 1052
AsuC2I CCSGG 2 cut(s) 23, 1008
AvaI CYCGRG 1 cut(s) 710
AvaII GGWCC 1 cut(s) 791
AvrII CCTAGG 1 cut(s) 1012
BaeGI GKGCMC 1 cut(s) 1049
BanI GGYRCC 1 cut(s) 28
BanII GRGCYC 1 cut(s) 1049
Bbv12I GWGCWC 1 cut(s) 763
BbvI GCAGC 4 cut(s) 64, 147, 332, 373
BciT130I CCWGG 3 cut(s) 429, 1050, 1088
BclI TGATCA 1 cut(s) 570
BcnI CCSGG 2 cut(s) 23, 1008
BcoDI GTCTC 2 cut(s) 713, 854
BfaI CTAG 3 cut(s) 678, 810, 1013
BfoI RGCGCY 1 cut(s) 32
BisI GCNGC 7 cut(s) 11, 27, 78, 136, 346, 362, 995
BlnI CCTAGG 1 cut(s) 1012
BlsI GCNGC 7 cut(s) 12, 28, 79, 137, 347, 363, 996
Bme1390I CCNGG 5 cut(s) 23, 429, 1008, 1050, 1088
Bme18I GGWCC 1 cut(s) 791
BmeT110I CYCGRG 1 cut(s) 710
BmgT120I GGNCC 5 cut(s) 169, 791, 1045, 1046, 1052
BmiI GGNNCC 3 cut(s) 30, 958, 1047
BmrFI CCNGG 5 cut(s) 23, 429, 1008, 1050, 1088
BmsI GCATC 1 cut(s) 910
BpmI CTGGAG 1 cut(s) 985
BpuMI CCSGG 2 cut(s) 23, 1008
BsaHI GRCGYC 3 cut(s) 29, 150, 206
BsaI GGTCTC 2 cut(s) 713, 854
BsaJI CCNNGG 3 cut(s) 428, 1012, 1048
BsaWI WCCGGW 2 cut(s) 209, 649
Bsc4I CCNNNNNNNGG 9 cut(s) 22, 159, 250, 289, 608, 664, 1007, 1013, 1014
Bse1I ACTGG 1 cut(s) 911
Bse3DI GCAATG 1 cut(s) 658
BseAI TCCGGA 1 cut(s) 649
BseBI CCWGG 3 cut(s) 429, 1050, 1088
BseDI CCNNGG 3 cut(s) 428, 1012, 1048
BseGI GGATG 1 cut(s) 925
BseLI CCNNNNNNNGG 9 cut(s) 22, 159, 250, 289, 608, 664, 1007, 1013, 1014
BseMI GCAATG 1 cut(s) 658
BseMII CTCAG 1 cut(s) 1050
BseNI ACTGG 1 cut(s) 911
BseRI GAGGAG 3 cut(s) 156, 885, 990
BseSI GKGCMC 1 cut(s) 1049
BseXI GCAGC 4 cut(s) 64, 147, 332, 373
BsgI GTGCAG 2 cut(s) 935, 1005
BshFI GGCC 4 cut(s) 170, 1011, 1047, 1053
BshNI GGYRCC 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 763
BsiHKCI CYCGRG 1 cut(s) 710
BsiSI CCGG 4 cut(s) 23, 210, 650, 1008
BslFI GGGAC 1 cut(s) 176
BslI CCNNNNNNNGG 9 cut(s) 22, 159, 250, 289, 608, 664, 1007, 1013, 1014
BsmAI GTCTC 2 cut(s) 713, 854
BsmFI GGGAC 1 cut(s) 176
BsnI GGCC 4 cut(s) 170, 1011, 1047, 1053
Bso31I GGTCTC 2 cut(s) 713, 854
BsoBI CYCGRG 1 cut(s) 710
Bsp120I GGGCCC 1 cut(s) 1045
Bsp1286I GDGCHC 2 cut(s) 763, 1049
Bsp13I TCCGGA 1 cut(s) 649
Bsp143I GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
BspACI CCGC 3 cut(s) 26, 138, 995
BspANI GGCC 4 cut(s) 170, 1011, 1047, 1053
BspCNI CTCAG 1 cut(s) 1051
BspEI TCCGGA 1 cut(s) 649
BspLI GGNNCC 3 cut(s) 30, 958, 1047
BspPI GGATC 1 cut(s) 800
BspT107I GGYRCC 1 cut(s) 28
BspTNI GGTCTC 2 cut(s) 713, 854
BsrDI GCAATG 1 cut(s) 658
BsrI ACTGG 1 cut(s) 911
BssECI CCNNGG 3 cut(s) 428, 1012, 1048
BssMI GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
BssNI GRCGYC 3 cut(s) 29, 150, 206
BssT1I CCWWGG 1 cut(s) 1012
Bst2UI CCWGG 3 cut(s) 429, 1050, 1088
Bst4CI ACNGT 2 cut(s) 131, 325
Bst6I CTCTTC 3 cut(s) 375, 585, 1008
BstACI GRCGYC 3 cut(s) 29, 150, 206
BstAPI GCANNNNNTGC 2 cut(s) 358, 767
BstC8I GCNNGC 5 cut(s) 350, 520, 772, 776, 1102
BstDEI CTNAG 1 cut(s) 1059
BstF5I GGATG 1 cut(s) 925
BstH2I RGCGCY 1 cut(s) 32
BstHHI GCGC 1 cut(s) 31
BstKTI GATC 6 cut(s) 557, 573, 643, 808, 833, 1023
BstMAI GTCTC 2 cut(s) 713, 854
BstMBI GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
BstMWI GCNNNNNNNGC 5 cut(s) 35, 77, 358, 701, 767
BstNI CCWGG 3 cut(s) 429, 1050, 1088
BstNSI RCATGY 1 cut(s) 778
BstSCI CCNGG 5 cut(s) 21, 427, 1006, 1048, 1086
BstSLI GKGCMC 1 cut(s) 1049
BstV1I GCAGC 4 cut(s) 64, 147, 332, 373
BsuRI GGCC 4 cut(s) 170, 1011, 1047, 1053
BtsCI GGATG 1 cut(s) 925
BtsI GCAGTG 1 cut(s) 258
BtsIMutI CAGTG 3 cut(s) 258, 918, 1030
Cac8I GCNNGC 5 cut(s) 350, 520, 772, 776, 1102
CaiI CAGNNNCTG 1 cut(s) 884
CfoI GCGC 1 cut(s) 31
Cfr13I GGNCC 5 cut(s) 169, 791, 1045, 1046, 1052
CseI GACGC 1 cut(s) 158
CsiI ACCWGGT 1 cut(s) 1086
Csp6I GTAC 3 cut(s) 127, 481, 619
CviAII CATG 4 cut(s) 234, 289, 523, 775
CviQI GTAC 3 cut(s) 127, 481, 619
DdeI CTNAG 1 cut(s) 1059
DinI GGCGCC 1 cut(s) 30
DpnI GATC 6 cut(s) 556, 572, 642, 807, 832, 1022
DpnII GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
Eam1104I CTCTTC 3 cut(s) 375, 585, 1008
EarI CTCTTC 3 cut(s) 375, 585, 1008
Eco130I CCWWGG 1 cut(s) 1012
Eco24I GRGCYC 1 cut(s) 1049
Eco31I GGTCTC 2 cut(s) 713, 854
Eco47I GGWCC 1 cut(s) 791
Eco57I CTGAAG 2 cut(s) 399, 443
Eco88I CYCGRG 1 cut(s) 710
EcoO109I RGGNCCY 1 cut(s) 1046
EcoRII CCWGG 3 cut(s) 427, 1048, 1086
EcoT14I CCWWGG 1 cut(s) 1012
EcoT38I GRGCYC 1 cut(s) 1049
EgeI GGCGCC 1 cut(s) 30
EheI GGCGCC 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 1012
FaeI CATG 4 cut(s) 237, 292, 526, 778
FalI AAGNNNNNCTT 2 cut(s) 587, 619
FaqI GGGAC 1 cut(s) 176
FatI CATG 4 cut(s) 233, 288, 522, 774
FauNDI CATATG 1 cut(s) 835
FbaI TGATCA 1 cut(s) 570
FblI GTMKAC 1 cut(s) 147
Fnu4HI GCNGC 7 cut(s) 11, 27, 78, 136, 346, 362, 995
FokI GGATG 1 cut(s) 932
FriOI GRGCYC 1 cut(s) 1049
Fsp4HI GCNGC 7 cut(s) 11, 27, 78, 136, 346, 362, 995
FspBI CTAG 3 cut(s) 678, 810, 1013
GlaI GCGC 1 cut(s) 30
GluI GCNGC 7 cut(s) 11, 27, 78, 136, 346, 362, 995
GsuI CTGGAG 1 cut(s) 985
HaeII RGCGCY 1 cut(s) 32
HaeIII GGCC 4 cut(s) 170, 1011, 1047, 1053
HapII CCGG 4 cut(s) 23, 210, 650, 1008
HgaI GACGC 1 cut(s) 158
HhaI GCGC 1 cut(s) 31
Hin1I GRCGYC 3 cut(s) 29, 150, 206
Hin1II CATG 4 cut(s) 237, 292, 526, 778
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HincII GTYRAC 1 cut(s) 148
HindII GTYRAC 1 cut(s) 148
HinfI GANTC 5 cut(s) 41, 57, 144, 458, 724
HpaII CCGG 4 cut(s) 23, 210, 650, 1008
Hpy166II GTNNAC 2 cut(s) 100, 148
Hpy188I TCNGA 3 cut(s) 312, 559, 611
Hpy188III TCNNGA 4 cut(s) 455, 650, 710, 964
Hpy8I GTNNAC 2 cut(s) 100, 148
Hpy99I CGWCG 2 cut(s) 152, 208
HpyAV CCTTC 1 cut(s) 244
HpyCH4III ACNGT 2 cut(s) 131, 325
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 8 cut(s) 288, 352, 361, 549, 770, 916, 986, 1100
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 77, 358, 701, 767
HpyF3I CTNAG 1 cut(s) 1059
HpySE526I ACGT 1 cut(s) 206
Hsp92I GRCGYC 3 cut(s) 29, 150, 206
Hsp92II CATG 4 cut(s) 237, 292, 526, 778
HspAI GCGC 1 cut(s) 29
KasI GGCGCC 1 cut(s) 28
Kpn2I TCCGGA 1 cut(s) 649
Ksp22I TGATCA 1 cut(s) 570
Kzo9I GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
LmnI GCTCC 1 cut(s) 898
Lsp1109I GCAGC 4 cut(s) 64, 147, 332, 373
LweI GCATC 1 cut(s) 910
MabI ACCWGGT 1 cut(s) 1086
MaeI CTAG 3 cut(s) 678, 810, 1013
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 2 cut(s) 179, 254
MalI GATC 6 cut(s) 556, 572, 642, 807, 832, 1022
MboI GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
MboII GAAGA 8 cut(s) 85, 305, 392, 499, 602, 815, 995, 1030
MhlI GDGCHC 2 cut(s) 763, 1049
MluCI AATT 6 cut(s) 192, 355, 629, 740, 784, 900
Mly113I GGCGCC 1 cut(s) 29
MlyI GAGTC 4 cut(s) 35, 51, 153, 452
MroI TCCGGA 1 cut(s) 649
MroXI GAANNNNTTC 1 cut(s) 324
MseI TTAA 3 cut(s) 87, 404, 626
MslI CAYNNNNRTG 2 cut(s) 312, 779
MspA1I CMGCKG 2 cut(s) 138, 364
MspI CCGG 4 cut(s) 23, 210, 650, 1008
MspR9I CCNGG 5 cut(s) 23, 429, 1008, 1050, 1088
MvaI CCWGG 3 cut(s) 429, 1050, 1088
MwoI GCNNNNNNNGC 5 cut(s) 35, 77, 358, 701, 767
NarI GGCGCC 1 cut(s) 29
NciI CCSGG 2 cut(s) 23, 1008
NdeI CATATG 1 cut(s) 835
NdeII GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
NlaIII CATG 4 cut(s) 237, 292, 526, 778
NlaIV GGNNCC 3 cut(s) 30, 958, 1047
NmeAIII GCCGAG 3 cut(s) 57, 178, 1099
NmuCI GTSAC 1 cut(s) 179
NspI RCATGY 1 cut(s) 778
PaeI GCATGC 1 cut(s) 778
PaeR7I CTCGAG 1 cut(s) 710
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 1 cut(s) 724
PflMI CCANNNNNTGG 1 cut(s) 664
PkrI GCNGC 7 cut(s) 12, 28, 79, 137, 347, 363, 996
PleI GAGTC 4 cut(s) 35, 51, 152, 452
PluTI GGCGCC 1 cut(s) 32
PpsI GAGTC 4 cut(s) 35, 51, 152, 452
Psp6I CCWGG 3 cut(s) 427, 1048, 1086
PspGI CCWGG 3 cut(s) 427, 1048, 1086
PspN4I GGNNCC 3 cut(s) 30, 958, 1047
PspOMI GGGCCC 1 cut(s) 1045
PspPI GGNCC 5 cut(s) 169, 791, 1045, 1046, 1052
PstNI CAGNNNCTG 1 cut(s) 884
PvuII CAGCTG 1 cut(s) 364
RsaI GTAC 3 cut(s) 128, 482, 620
RsaNI GTAC 3 cut(s) 127, 481, 619
RseI CAYNNNNRTG 2 cut(s) 312, 779
SalI GTCGAC 1 cut(s) 146
SaqAI TTAA 3 cut(s) 87, 404, 626
SatI GCNGC 7 cut(s) 11, 27, 78, 136, 346, 362, 995
Sau3AI GATC 6 cut(s) 554, 570, 640, 805, 830, 1020
Sau96I GGNCC 5 cut(s) 169, 791, 1045, 1046, 1052
SchI GAGTC 4 cut(s) 35, 51, 153, 452
ScrFI CCNGG 5 cut(s) 23, 429, 1008, 1050, 1088
SduI GDGCHC 2 cut(s) 763, 1049
SexAI ACCWGGT 1 cut(s) 1086
SfaNI GCATC 1 cut(s) 910
SfoI GGCGCC 1 cut(s) 30
Sfr274I CTCGAG 1 cut(s) 710
SinI GGWCC 1 cut(s) 791
SlaI CTCGAG 1 cut(s) 710
SmiMI CAYNNNNRTG 2 cut(s) 312, 779
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
SphI GCATGC 1 cut(s) 778
Sse9I AATT 6 cut(s) 192, 355, 629, 740, 784, 900
SsiI CCGC 3 cut(s) 26, 138, 995
SspDI GGCGCC 1 cut(s) 28
SspMI CTAG 3 cut(s) 678, 810, 1013
StyD4I CCNGG 5 cut(s) 21, 427, 1006, 1048, 1086
StyI CCWWGG 1 cut(s) 1012
TaaI ACNGT 2 cut(s) 131, 325
TaiI ACGT 1 cut(s) 209
TaqI TCGA 6 cut(s) 55, 147, 203, 585, 711, 829
TaqII GACCGA 1 cut(s) 167
TasI AATT 6 cut(s) 192, 355, 629, 740, 784, 900
TatI WGTACW 1 cut(s) 126
TauI GCSGC 2 cut(s) 29, 997
TfiI GAWTC 1 cut(s) 724
Tru1I TTAA 3 cut(s) 87, 404, 626
Tru9I TTAA 3 cut(s) 87, 404, 626
TscAI CASTG 3 cut(s) 265, 918, 1030
TseFI GTSAC 1 cut(s) 179
TseI GCWGC 5 cut(s) 10, 77, 135, 345, 361
Tsp45I GTSAC 1 cut(s) 179
TspDTI ATGAA 4 cut(s) 539, 659, 673, 797
TspRI CASTG 3 cut(s) 265, 918, 1030
Van91I CCANNNNNTGG 1 cut(s) 664
VpaK11BI GGWCC 1 cut(s) 791
XapI RAATTY 3 cut(s) 355, 740, 784
XceI RCATGY 1 cut(s) 778
XhoI CTCGAG 1 cut(s) 710
XmaJI CCTAGG 1 cut(s) 1012
XmiI GTMKAC 1 cut(s) 147
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 3 cut(s) 678, 810, 1013
ZraI GACGTC 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.