Rw1G026990

mRNA cap guanine-N7 methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
54335027 .. 54338226
3200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G026990.1

Sequence Viewer

Length: 1122 bp
ATGATGATGATGACTCAACACCCGGCGGCGCCGAGAGCCGAGTCGACTCACAATCGACTCTACGAGTTCGCTAAAGCCGCCCTCACCAAAATCTTCGTCCACCCCTACGCCTCGGTGTGTGAGTTGTACTGCGGCGGCGGCGGACTCGACGCCGAGAAGTGGGACGAGTTCCAAATCGGTCACTACATTGGAATTGATGTTTCGACGTCCGGAATAAGCCAGAGAAGAGAAGCTTGGGAGAGCCAGAGGAAGAGTTACACTGCTGACTTCTTTGAGCTCGACCCCTGCATGGACGATATAGAGCCACATCTGAATGAGGACACCATTCTGGCTGATTTAGTTTGCTGCTTGCAGAATTTGCAGCTGTGTTTCCAAACTGAAGAGAAAGCAAGGAGGCTCTTGTTAAATGTGTCGTCCTTACTGAAGCCAGGGGGTTATTTTTTTGGTATTACTCCTGACTCATCTACAATATGGGCAAAGTACCAGAAGAATGTAGAAGCATACCACAACAGAAGTGCTGGCATGAAACCAAACATTGTTCCCAACTGCATCAGATCAGAGAACTATGTTATCACTTTTGAAATTGAGGAAGAGAAGTTCCCCTTATTCGGAAAGAAGTACCTGCTAAAGTTGGCTAATGATCTCCCCCCTGAAACCCATTGCTTGGTTCATTTCCCTAGCTTCATTAGGTTAGCCAGAGAAGCTGGTCTTGAGTATGTGGAGATTCAAAATCTAACTGAATTTTATGATGACAACAGAGCACAGTTTGCAGGCATGCTAATGAACTATGGCCCAAACCTTGCGGATCCGAGAGGCAGACTTCTTCCTCGATCATATGATGTGTTAGGTTTGTATACCACATTTATATTTCAAAAGCCAGACCCTGATATTGCTCCTCCACCTATGACACCGGTGCATCAGGATGCACCATACATTATTGATGAGAAAGAGTGGCAAGGAACCCTCTGGAGAGATGATGAAAAGAGTGCACCTGTAGAGCCGCCTCCTCTTCCCGGCCTAGGGAAGATCAGCGAGCAAAAAGGGATTTTGGGTCCTGGCCCTGCTGAGTTGCGTTTTTCTGAGCCACTTGACCTGGTGGTTGTTGCAAGCAAGAAGAATTAG

Protein Analysis

373

Amino Acids

42.28

Weight (kDa)

5.12

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mRNA_G-N7_MeTrfase PF03291 38 - 292 7.7e-34 mRNA (guanine-N(7))-methyltransferase domain
Methyltransf_31 PF13847 38 - 174 7.3e-06 Methyltransferase domain
Methyltransf_12 PF08242 44 - 147 7.5e-06 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 209
Acc36I ACCTGC 1 cut(s) 630
AccB1I GGYRCC 1 cut(s) 28
AccB7I CCANNNNNTGG 1 cut(s) 664
AccI GTMKAC 2 cut(s) 44, 854
AccIII TCCGGA 1 cut(s) 209
AciI CCGC 8 cut(s) 26, 78, 132, 135, 138, 141, 803, 1001
AclWI GGATC 2 cut(s) 800, 813
AcsI RAATTY 2 cut(s) 355, 740
AcuI CTGAAG 2 cut(s) 399, 443
AcyI GRCGYC 3 cut(s) 29, 150, 206
AfaI GTAC 3 cut(s) 128, 482, 620
AfiI CCNNNNNNNGG 7 cut(s) 159, 289, 608, 664, 1013, 1019, 1020
AgeI ACCGGT 1 cut(s) 910
AgsI TTSAA 3 cut(s) 581, 728, 872
AjnI CCWGG 3 cut(s) 427, 1054, 1092
AjuI GAANNNNNNNTTGG 2 cut(s) 217, 249
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
AluBI AGCT 5 cut(s) 233, 277, 364, 681, 704
AluI AGCT 5 cut(s) 233, 277, 364, 681, 704
Alw21I GWGCWC 3 cut(s) 279, 763, 991
Alw44I GTGCAC 1 cut(s) 987
AlwI GGATC 2 cut(s) 800, 813
AlwNI CAGNNNCTG 1 cut(s) 884
Aor13HI TCCGGA 1 cut(s) 209
AoxI GGCC 3 cut(s) 790, 1015, 1057
ApaLI GTGCAC 1 cut(s) 987
ApeKI GCWGC 2 cut(s) 345, 361
ApoI RAATTY 2 cut(s) 355, 740
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
AsiGI ACCGGT 1 cut(s) 910
AspA2I CCTAGG 1 cut(s) 1018
AspLEI GCGC 1 cut(s) 31
AspS9I GGNCC 3 cut(s) 791, 1052, 1058
AsuC2I CCSGG 2 cut(s) 23, 1014
AsuHPI GGTGA 1 cut(s) 76
AvaII GGWCC 1 cut(s) 1052
AvrII CCTAGG 1 cut(s) 1018
BaeGI GKGCMC 1 cut(s) 991
BamHI GGATCC 1 cut(s) 805
BanI GGYRCC 1 cut(s) 28
BanII GRGCYC 1 cut(s) 279
Bbv12I GWGCWC 3 cut(s) 279, 763, 991
BbvI GCAGC 2 cut(s) 332, 373
BciT130I CCWGG 3 cut(s) 429, 1056, 1094
BcnI CCSGG 2 cut(s) 23, 1014
BfaI CTAG 2 cut(s) 678, 1019
BfmI CTRYAG 1 cut(s) 993
BfoI RGCGCY 1 cut(s) 32
BfuAI ACCTGC 1 cut(s) 630
BisI GCNGC 8 cut(s) 27, 78, 133, 136, 139, 346, 362, 1001
BlnI CCTAGG 1 cut(s) 1018
BlsI GCNGC 8 cut(s) 28, 79, 134, 137, 140, 347, 363, 1002
Bme1390I CCNGG 5 cut(s) 23, 429, 1014, 1056, 1094
Bme18I GGWCC 1 cut(s) 1052
BmgT120I GGNCC 3 cut(s) 791, 1052, 1058
BmiI GGNNCC 4 cut(s) 30, 807, 961, 1053
BmrFI CCNGG 5 cut(s) 23, 429, 1014, 1056, 1094
BmsI GCATC 3 cut(s) 558, 913, 925
BpmI CTGGAG 1 cut(s) 988
BpuEI CTTGAG 1 cut(s) 731
BpuMI CCSGG 2 cut(s) 23, 1014
BsaHI GRCGYC 3 cut(s) 29, 150, 206
BsaJI CCNNGG 3 cut(s) 111, 428, 1018
BsaWI WCCGGW 2 cut(s) 209, 910
Bsc4I CCNNNNNNNGG 7 cut(s) 159, 289, 608, 664, 1013, 1019, 1020
Bse118I RCCGGY 1 cut(s) 910
Bse3DI GCAATG 1 cut(s) 658
BseAI TCCGGA 1 cut(s) 209
BseBI CCWGG 3 cut(s) 429, 1056, 1094
BseDI CCNNGG 3 cut(s) 111, 428, 1018
BseGI GGATG 1 cut(s) 928
BseLI CCNNNNNNNGG 7 cut(s) 159, 289, 608, 664, 1013, 1019, 1020
BseMI GCAATG 1 cut(s) 658
BseMII CTCAG 2 cut(s) 1056, 1071
BseRI GAGGAG 2 cut(s) 885, 996
BseSI GKGCMC 1 cut(s) 991
BseXI GCAGC 2 cut(s) 332, 373
BshFI GGCC 3 cut(s) 792, 1017, 1059
BshNI GGYRCC 1 cut(s) 28
BshTI ACCGGT 1 cut(s) 910
BsiHKAI GWGCWC 3 cut(s) 279, 763, 991
BsiSI CCGG 4 cut(s) 23, 210, 911, 1014
BslFI GGGAC 1 cut(s) 176
BslI CCNNNNNNNGG 7 cut(s) 159, 289, 608, 664, 1013, 1019, 1020
BsmFI GGGAC 1 cut(s) 176
BsnI GGCC 3 cut(s) 792, 1017, 1059
Bsp1286I GDGCHC 3 cut(s) 279, 763, 991
Bsp13I TCCGGA 1 cut(s) 209
Bsp143I GATC 5 cut(s) 554, 640, 805, 830, 1026
BspACI CCGC 8 cut(s) 26, 78, 132, 135, 138, 141, 803, 1001
BspANI GGCC 3 cut(s) 792, 1017, 1059
BspCNI CTCAG 2 cut(s) 1057, 1072
BspEI TCCGGA 1 cut(s) 209
BspLI GGNNCC 4 cut(s) 30, 807, 961, 1053
BspMI ACCTGC 1 cut(s) 630
BspPI GGATC 2 cut(s) 800, 813
BspT107I GGYRCC 1 cut(s) 28
BsrDI GCAATG 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 910
BssAI RCCGGY 1 cut(s) 910
BssECI CCNNGG 3 cut(s) 111, 428, 1018
BssMI GATC 5 cut(s) 554, 640, 805, 830, 1026
BssNAI GTATAC 1 cut(s) 855
BssNI GRCGYC 3 cut(s) 29, 150, 206
BssT1I CCWWGG 1 cut(s) 1018
Bst1107I GTATAC 1 cut(s) 855
Bst2UI CCWGG 3 cut(s) 429, 1056, 1094
Bst4CI ACNGT 1 cut(s) 765
Bst6I CTCTTC 5 cut(s) 220, 245, 375, 585, 1014
BstACI GRCGYC 3 cut(s) 29, 150, 206
BstAPI GCANNNNNTGC 2 cut(s) 358, 767
BstC8I GCNNGC 6 cut(s) 350, 520, 772, 776, 1034, 1108
BstDEI CTNAG 2 cut(s) 1065, 1080
BstF5I GGATG 1 cut(s) 928
BstH2I RGCGCY 1 cut(s) 32
BstHHI GCGC 1 cut(s) 31
BstKTI GATC 5 cut(s) 557, 643, 808, 833, 1029
BstMBI GATC 5 cut(s) 554, 640, 805, 830, 1026
BstMWI GCNNNNNNNGC 6 cut(s) 35, 77, 138, 358, 701, 767
BstNI CCWGG 3 cut(s) 429, 1056, 1094
BstNSI RCATGY 1 cut(s) 778
BstSCI CCNGG 5 cut(s) 21, 427, 1012, 1054, 1092
BstSFI CTRYAG 1 cut(s) 993
BstSLI GKGCMC 1 cut(s) 991
BstV1I GCAGC 2 cut(s) 332, 373
BstX2I RGATCY 1 cut(s) 805
BstYI RGATCY 1 cut(s) 805
BstZ17I GTATAC 1 cut(s) 855
BsuRI GGCC 3 cut(s) 792, 1017, 1059
BtsCI GGATG 1 cut(s) 928
BtsI GCAGTG 1 cut(s) 258
BtsIMutI CAGTG 1 cut(s) 258
BveI ACCTGC 1 cut(s) 630
Cac8I GCNNGC 6 cut(s) 350, 520, 772, 776, 1034, 1108
CaiI CAGNNNCTG 1 cut(s) 884
CfoI GCGC 1 cut(s) 31
Cfr10I RCCGGY 1 cut(s) 910
Cfr13I GGNCC 3 cut(s) 791, 1052, 1058
CseI GACGC 1 cut(s) 158
CsiI ACCWGGT 1 cut(s) 1092
Csp6I GTAC 3 cut(s) 127, 481, 619
CspAI ACCGGT 1 cut(s) 910
CviAII CATG 3 cut(s) 289, 523, 775
CviQI GTAC 3 cut(s) 127, 481, 619
DdeI CTNAG 2 cut(s) 1065, 1080
DinI GGCGCC 1 cut(s) 30
DpnI GATC 5 cut(s) 556, 642, 807, 832, 1028
DpnII GATC 5 cut(s) 554, 640, 805, 830, 1026
Eam1104I CTCTTC 5 cut(s) 220, 245, 375, 585, 1014
EarI CTCTTC 5 cut(s) 220, 245, 375, 585, 1014
EciI GGCGGA 1 cut(s) 156
Ecl136II GAGCTC 1 cut(s) 277
Eco130I CCWWGG 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 279
Eco47I GGWCC 1 cut(s) 1052
Eco53kI GAGCTC 1 cut(s) 277
Eco57I CTGAAG 2 cut(s) 399, 443
EcoICRI GAGCTC 1 cut(s) 277
EcoO109I RGGNCCY 1 cut(s) 1052
EcoRII CCWGG 3 cut(s) 427, 1054, 1092
EcoT14I CCWWGG 1 cut(s) 1018
EcoT38I GRGCYC 1 cut(s) 279
EgeI GGCGCC 1 cut(s) 30
EheI GGCGCC 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 1018
FaeI CATG 3 cut(s) 292, 526, 778
FalI AAGNNNNNCTT 6 cut(s) 217, 249, 587, 619, 693, 725
FaqI GGGAC 1 cut(s) 176
FatI CATG 3 cut(s) 288, 522, 774
FauNDI CATATG 1 cut(s) 835
FblI GTMKAC 2 cut(s) 44, 854
Fnu4HI GCNGC 8 cut(s) 27, 78, 133, 136, 139, 346, 362, 1001
FokI GGATG 1 cut(s) 935
FriOI GRGCYC 1 cut(s) 279
Fsp4HI GCNGC 8 cut(s) 27, 78, 133, 136, 139, 346, 362, 1001
FspBI CTAG 2 cut(s) 678, 1019
GlaI GCGC 1 cut(s) 30
GluI GCNGC 8 cut(s) 27, 78, 133, 136, 139, 346, 362, 1001
GsuI CTGGAG 1 cut(s) 988
HaeII RGCGCY 1 cut(s) 32
HaeIII GGCC 3 cut(s) 792, 1017, 1059
HapII CCGG 4 cut(s) 23, 210, 911, 1014
HgaI GACGC 1 cut(s) 158
HhaI GCGC 1 cut(s) 31
Hin1I GRCGYC 3 cut(s) 29, 150, 206
Hin1II CATG 3 cut(s) 292, 526, 778
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 7 cut(s) 13, 41, 46, 57, 144, 458, 724
HpaII CCGG 4 cut(s) 23, 210, 911, 1014
HphI GGTGA 1 cut(s) 76
Hpy166II GTNNAC 4 cut(s) 45, 100, 855, 989
Hpy188I TCNGA 6 cut(s) 312, 554, 559, 611, 810, 1081
Hpy188III TCNNGA 5 cut(s) 210, 455, 710, 920, 967
Hpy8I GTNNAC 4 cut(s) 45, 100, 855, 989
Hpy99I CGWCG 2 cut(s) 152, 208
HpyCH4III ACNGT 1 cut(s) 765
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 9 cut(s) 288, 352, 361, 549, 770, 916, 926, 989, 1106
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 77, 138, 358, 701, 767
HpyF3I CTNAG 2 cut(s) 1065, 1080
HpySE526I ACGT 1 cut(s) 206
Hsp92I GRCGYC 3 cut(s) 29, 150, 206
Hsp92II CATG 3 cut(s) 292, 526, 778
HspAI GCGC 1 cut(s) 29
KasI GGCGCC 1 cut(s) 28
Kpn2I TCCGGA 1 cut(s) 209
Kzo9I GATC 5 cut(s) 554, 640, 805, 830, 1026
LmnI GCTCC 1 cut(s) 898
Lsp1109I GCAGC 2 cut(s) 332, 373
LweI GCATC 3 cut(s) 558, 913, 925
MabI ACCWGGT 1 cut(s) 1092
MaeI CTAG 2 cut(s) 678, 1019
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 2 cut(s) 179, 254
MalI GATC 5 cut(s) 556, 642, 807, 832, 1028
MboI GATC 5 cut(s) 554, 640, 805, 830, 1026
MboII GAAGA 9 cut(s) 85, 237, 262, 392, 499, 602, 815, 1001, 1036
MflI RGATCY 1 cut(s) 805
MhlI GDGCHC 3 cut(s) 279, 763, 991
MluCI AATT 5 cut(s) 192, 355, 582, 740, 1117
Mly113I GGCGCC 1 cut(s) 29
MlyI GAGTC 6 cut(s) 7, 40, 50, 51, 138, 452
MroI TCCGGA 1 cut(s) 209
MseI TTAA 1 cut(s) 404
MslI CAYNNNNRTG 3 cut(s) 312, 779, 921
MspA1I CMGCKG 1 cut(s) 364
MspI CCGG 4 cut(s) 23, 210, 911, 1014
MspR9I CCNGG 5 cut(s) 23, 429, 1014, 1056, 1094
MvaI CCWGG 3 cut(s) 429, 1056, 1094
MwoI GCNNNNNNNGC 6 cut(s) 35, 77, 138, 358, 701, 767
NarI GGCGCC 1 cut(s) 29
NciI CCSGG 2 cut(s) 23, 1014
NdeI CATATG 1 cut(s) 835
NdeII GATC 5 cut(s) 554, 640, 805, 830, 1026
NlaIII CATG 3 cut(s) 292, 526, 778
NlaIV GGNNCC 4 cut(s) 30, 807, 961, 1053
NmeAIII GCCGAG 3 cut(s) 57, 64, 178
NmuCI GTSAC 1 cut(s) 179
NspI RCATGY 1 cut(s) 778
PaeI GCATGC 1 cut(s) 778
PfeI GAWTC 1 cut(s) 724
PflMI CCANNNNNTGG 1 cut(s) 664
PinAI ACCGGT 1 cut(s) 910
PkrI GCNGC 8 cut(s) 28, 79, 134, 137, 140, 347, 363, 1002
PleI GAGTC 6 cut(s) 7, 40, 49, 51, 138, 452
PluTI GGCGCC 1 cut(s) 32
PpsI GAGTC 6 cut(s) 7, 40, 49, 51, 138, 452
PpuMI RGGWCCY 1 cut(s) 1052
Psp124BI GAGCTC 1 cut(s) 279
Psp5II RGGWCCY 1 cut(s) 1052
Psp6I CCWGG 3 cut(s) 427, 1054, 1092
PspGI CCWGG 3 cut(s) 427, 1054, 1092
PspN4I GGNNCC 4 cut(s) 30, 807, 961, 1053
PspPI GGNCC 3 cut(s) 791, 1052, 1058
PspPPI RGGWCCY 1 cut(s) 1052
PstNI CAGNNNCTG 1 cut(s) 884
PsuI RGATCY 1 cut(s) 805
PvuII CAGCTG 1 cut(s) 364
RsaI GTAC 3 cut(s) 128, 482, 620
RsaNI GTAC 3 cut(s) 127, 481, 619
RseI CAYNNNNRTG 3 cut(s) 312, 779, 921
SacI GAGCTC 1 cut(s) 279
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 1 cut(s) 404
SatI GCNGC 8 cut(s) 27, 78, 133, 136, 139, 346, 362, 1001
Sau3AI GATC 5 cut(s) 554, 640, 805, 830, 1026
Sau96I GGNCC 3 cut(s) 791, 1052, 1058
SchI GAGTC 6 cut(s) 7, 40, 50, 51, 138, 452
ScrFI CCNGG 5 cut(s) 23, 429, 1014, 1056, 1094
SduI GDGCHC 3 cut(s) 279, 763, 991
SexAI ACCWGGT 1 cut(s) 1092
SfaNI GCATC 3 cut(s) 558, 913, 925
SfcI CTRYAG 1 cut(s) 993
SfoI GGCGCC 1 cut(s) 30
SgrAI CRCCGGYG 1 cut(s) 910
SinI GGWCC 1 cut(s) 1052
SmiMI CAYNNNNRTG 3 cut(s) 312, 779, 921
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
SphI GCATGC 1 cut(s) 778
Sse9I AATT 5 cut(s) 192, 355, 582, 740, 1117
SsiI CCGC 8 cut(s) 26, 78, 132, 135, 138, 141, 803, 1001
SspDI GGCGCC 1 cut(s) 28
SspMI CTAG 2 cut(s) 678, 1019
SstI GAGCTC 1 cut(s) 279
StyD4I CCNGG 5 cut(s) 21, 427, 1012, 1054, 1092
StyI CCWWGG 1 cut(s) 1018
TaaI ACNGT 1 cut(s) 765
TaiI ACGT 1 cut(s) 209
TaqI TCGA 6 cut(s) 44, 55, 147, 203, 279, 829
TaqII GACCGA 1 cut(s) 167
TasI AATT 5 cut(s) 192, 355, 582, 740, 1117
TatI WGTACW 1 cut(s) 126
TauI GCSGC 6 cut(s) 29, 80, 135, 138, 141, 1003
TfiI GAWTC 1 cut(s) 724
Tru1I TTAA 1 cut(s) 404
Tru9I TTAA 1 cut(s) 404
TscAI CASTG 1 cut(s) 265
TseFI GTSAC 1 cut(s) 179
TseI GCWGC 2 cut(s) 345, 361
Tsp45I GTSAC 1 cut(s) 179
TspDTI ATGAA 5 cut(s) 539, 659, 673, 797, 993
TspRI CASTG 1 cut(s) 265
Van91I CCANNNNNTGG 1 cut(s) 664
VneI GTGCAC 1 cut(s) 987
VpaK11BI GGWCC 1 cut(s) 1052
XapI RAATTY 2 cut(s) 355, 740
XceI RCATGY 1 cut(s) 778
XmaJI CCTAGG 1 cut(s) 1018
XmiI GTMKAC 2 cut(s) 44, 854
XspI CTAG 2 cut(s) 678, 1019
ZraI GACGTC 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.