RchiOBHm_Chr1g0362021

mRNA cap guanine-N7 methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
53738701 .. 53741902
3202 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58687

Sequence Viewer

Length: 1125 bp
ATGATGATGATGACGACTCAACACCCGGCGGCGCCGAGAGCCGAGTCGACTCACAATCGACTCTACGAGTTCGCTAAAGCCGCCCTCACCAAAATCTTCGTCCACCCCTACGCCTCGGTGTGTGAGTTGTACTGCGGCGGCGGCGGACTCGACGCCGAGAAGTGGGACGAGTTCCAAATCGGTCACTACATTGGAATTGATGTTTCGACGTCCGGAATAAGCCAGAGAAGAGAAGCTTGGGAGAGCCAGAGGAAGAGTTACACTGCTGACTTCTTTGAGCTCGACCCCTGCATGGAAGATATAGAGCCACATCTGAATGAGGACACCATTCTGGCTGATTTAGTTTGCTGCTTGCAGAATTTGCAGTTGTGTTTCCAAACTGAAGAGAAAGCAAGGAGGCTCTTGTTAAATGTGTCGTCCTTACTGAAGCCAGGGGGTTATTTTTTTGGTATTACTCCTGACTCATCTACAATATGGGCAAAGTACCAGAAGAATGTAGAAGCATACCACAACAGAAGTGCTGGTATGAAACCAAACATTGTTCCCAACTGCATCAGATCAGAGAACTATGTGATCACTTTTGAAATTGAGGAAGAGAAGTTCCCCTTATTCGGAAAGAAGTACCTGCTAAAATTGGCTAATGATCTCCCCCCTGAAACCCATTGCTTGGTTCATTTCCCTAGCTTCATTAGGTTAGCCAGAGAAGCTGGTCTTGAGTATGTGGAGATTCAAAATCTAACTGAATTTTATGATGACAACAGAGCACAGTTTGCAGGCATGCTAATGAACTATGGCCCAAACCTTGCGGATCCGAGAGGCAGACTTCTTCCTCGATCATATGATGTGTTAGGTTTGTATACCACATTTATATTTCAAAAGCCAGACCCTGATATTGCTCCTCCACCTATGACACCAGTGCATCAGGATGCACCACACATTATTGATGAGAAAGAGTGGCAAGGAACCCTCTGGAGAGATGATGAAAAGAGTGCACCTGTAGAGCCGCCTCCTCTTCCCGGCCTAGGGAAGATCAGCGAGCAAAAAGGGATTTTGGGTCCTGGCCCTGCTGAGTTGCGTTTTTCTGAGCCACTTGACCTGGTGGTTGTTGCAAGCAAGAAGAATTAG

Protein Analysis

374

Amino Acids

42.37

Weight (kDa)

5.18

Isoelectric Point (pI)

48.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mRNA_G-N7_MeTrfase PF03291 39 - 293 3.7e-34 mRNA (guanine-N(7))-methyltransferase domain
Methyltransf_31 PF13847 39 - 175 4.6e-06 Methyltransferase domain
Methyltransf_12 PF08242 45 - 148 7.7e-06 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 212
Acc36I ACCTGC 1 cut(s) 633
AccB1I GGYRCC 1 cut(s) 31
AccB7I CCANNNNNTGG 1 cut(s) 667
AccI GTMKAC 2 cut(s) 47, 857
AccIII TCCGGA 1 cut(s) 212
AciI CCGC 8 cut(s) 29, 81, 135, 138, 141, 144, 806, 1004
AclWI GGATC 2 cut(s) 803, 816
AcsI RAATTY 2 cut(s) 358, 743
AcuI CTGAAG 2 cut(s) 402, 446
AcyI GRCGYC 3 cut(s) 32, 153, 209
AfaI GTAC 3 cut(s) 131, 485, 623
AfiI CCNNNNNNNGG 7 cut(s) 162, 292, 611, 667, 1016, 1022, 1023
AgsI TTSAA 3 cut(s) 584, 731, 875
AjnI CCWGG 3 cut(s) 430, 1057, 1095
AjuI GAANNNNNNNTTGG 2 cut(s) 220, 252
AloI GAACNNNNNNTCC 2 cut(s) 584, 616
AluBI AGCT 4 cut(s) 236, 280, 684, 707
AluI AGCT 4 cut(s) 236, 280, 684, 707
Alw21I GWGCWC 3 cut(s) 282, 766, 994
Alw44I GTGCAC 1 cut(s) 990
AlwI GGATC 2 cut(s) 803, 816
AlwNI CAGNNNCTG 1 cut(s) 887
Aor13HI TCCGGA 1 cut(s) 212
AoxI GGCC 3 cut(s) 793, 1018, 1060
ApaLI GTGCAC 1 cut(s) 990
ApeKI GCWGC 1 cut(s) 348
ApoI RAATTY 2 cut(s) 358, 743
ArsI GACNNNNNNTTYG 2 cut(s) 84, 116
AspA2I CCTAGG 1 cut(s) 1021
AspLEI GCGC 1 cut(s) 34
AspS9I GGNCC 3 cut(s) 794, 1055, 1061
AsuC2I CCSGG 2 cut(s) 26, 1017
AsuHPI GGTGA 1 cut(s) 79
AvaII GGWCC 1 cut(s) 1055
AvrII CCTAGG 1 cut(s) 1021
BaeGI GKGCMC 1 cut(s) 994
BamHI GGATCC 1 cut(s) 808
BanI GGYRCC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 282
Bbv12I GWGCWC 3 cut(s) 282, 766, 994
BbvI GCAGC 1 cut(s) 335
BciT130I CCWGG 3 cut(s) 432, 1059, 1097
BclI TGATCA 1 cut(s) 573
BcnI CCSGG 2 cut(s) 26, 1017
BfaI CTAG 2 cut(s) 681, 1022
BfmI CTRYAG 1 cut(s) 996
BfoI RGCGCY 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 633
BisI GCNGC 7 cut(s) 30, 81, 136, 139, 142, 349, 1004
BlnI CCTAGG 1 cut(s) 1021
BlsI GCNGC 7 cut(s) 31, 82, 137, 140, 143, 350, 1005
Bme1390I CCNGG 5 cut(s) 26, 432, 1017, 1059, 1097
Bme18I GGWCC 1 cut(s) 1055
BmgT120I GGNCC 3 cut(s) 794, 1055, 1061
BmiI GGNNCC 4 cut(s) 33, 810, 964, 1056
BmrFI CCNGG 5 cut(s) 26, 432, 1017, 1059, 1097
BmsI GCATC 3 cut(s) 561, 916, 928
BpmI CTGGAG 1 cut(s) 991
BpuEI CTTGAG 1 cut(s) 734
BpuMI CCSGG 2 cut(s) 26, 1017
BsaHI GRCGYC 3 cut(s) 32, 153, 209
BsaJI CCNNGG 3 cut(s) 114, 431, 1021
BsaWI WCCGGW 1 cut(s) 212
Bsc4I CCNNNNNNNGG 7 cut(s) 162, 292, 611, 667, 1016, 1022, 1023
Bse1I ACTGG 1 cut(s) 914
Bse3DI GCAATG 1 cut(s) 661
BseAI TCCGGA 1 cut(s) 212
BseBI CCWGG 3 cut(s) 432, 1059, 1097
BseDI CCNNGG 3 cut(s) 114, 431, 1021
BseGI GGATG 1 cut(s) 931
BseLI CCNNNNNNNGG 7 cut(s) 162, 292, 611, 667, 1016, 1022, 1023
BseMI GCAATG 1 cut(s) 661
BseMII CTCAG 2 cut(s) 1059, 1074
BseNI ACTGG 1 cut(s) 914
BseRI GAGGAG 2 cut(s) 888, 999
BseSI GKGCMC 1 cut(s) 994
BseXI GCAGC 1 cut(s) 335
BshFI GGCC 3 cut(s) 795, 1020, 1062
BshNI GGYRCC 1 cut(s) 31
BsiHKAI GWGCWC 3 cut(s) 282, 766, 994
BsiSI CCGG 3 cut(s) 26, 213, 1017
BslFI GGGAC 1 cut(s) 179
BslI CCNNNNNNNGG 7 cut(s) 162, 292, 611, 667, 1016, 1022, 1023
BsmFI GGGAC 1 cut(s) 179
BsnI GGCC 3 cut(s) 795, 1020, 1062
Bsp1286I GDGCHC 3 cut(s) 282, 766, 994
Bsp13I TCCGGA 1 cut(s) 212
Bsp143I GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
BspACI CCGC 8 cut(s) 29, 81, 135, 138, 141, 144, 806, 1004
BspANI GGCC 3 cut(s) 795, 1020, 1062
BspCNI CTCAG 2 cut(s) 1060, 1075
BspEI TCCGGA 1 cut(s) 212
BspLI GGNNCC 4 cut(s) 33, 810, 964, 1056
BspMI ACCTGC 1 cut(s) 633
BspPI GGATC 2 cut(s) 803, 816
BspT107I GGYRCC 1 cut(s) 31
BsrDI GCAATG 1 cut(s) 661
BsrI ACTGG 1 cut(s) 914
BssECI CCNNGG 3 cut(s) 114, 431, 1021
BssMI GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
BssNAI GTATAC 1 cut(s) 858
BssNI GRCGYC 3 cut(s) 32, 153, 209
BssT1I CCWWGG 1 cut(s) 1021
Bst1107I GTATAC 1 cut(s) 858
Bst2UI CCWGG 3 cut(s) 432, 1059, 1097
Bst4CI ACNGT 1 cut(s) 768
Bst6I CTCTTC 5 cut(s) 223, 248, 378, 588, 1017
BstACI GRCGYC 3 cut(s) 32, 153, 209
BstAPI GCANNNNNTGC 2 cut(s) 361, 770
BstC8I GCNNGC 5 cut(s) 353, 775, 779, 1037, 1111
BstDEI CTNAG 2 cut(s) 1068, 1083
BstF5I GGATG 1 cut(s) 931
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstKTI GATC 6 cut(s) 560, 576, 646, 811, 836, 1032
BstMBI GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
BstMWI GCNNNNNNNGC 6 cut(s) 38, 80, 141, 361, 704, 770
BstNI CCWGG 3 cut(s) 432, 1059, 1097
BstNSI RCATGY 1 cut(s) 781
BstSCI CCNGG 5 cut(s) 24, 430, 1015, 1057, 1095
BstSFI CTRYAG 1 cut(s) 996
BstSLI GKGCMC 1 cut(s) 994
BstV1I GCAGC 1 cut(s) 335
BstX2I RGATCY 1 cut(s) 808
BstYI RGATCY 1 cut(s) 808
BstZ17I GTATAC 1 cut(s) 858
BsuRI GGCC 3 cut(s) 795, 1020, 1062
BtsCI GGATG 1 cut(s) 931
BtsI GCAGTG 1 cut(s) 261
BtsIMutI CAGTG 2 cut(s) 261, 921
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 5 cut(s) 353, 775, 779, 1037, 1111
CaiI CAGNNNCTG 1 cut(s) 887
CfoI GCGC 1 cut(s) 34
Cfr13I GGNCC 3 cut(s) 794, 1055, 1061
CseI GACGC 1 cut(s) 161
CsiI ACCWGGT 1 cut(s) 1095
Csp6I GTAC 3 cut(s) 130, 484, 622
CviAII CATG 2 cut(s) 292, 778
CviQI GTAC 3 cut(s) 130, 484, 622
DdeI CTNAG 2 cut(s) 1068, 1083
DinI GGCGCC 1 cut(s) 33
DpnI GATC 6 cut(s) 559, 575, 645, 810, 835, 1031
DpnII GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
Eam1104I CTCTTC 5 cut(s) 223, 248, 378, 588, 1017
EarI CTCTTC 5 cut(s) 223, 248, 378, 588, 1017
EciI GGCGGA 1 cut(s) 159
Ecl136II GAGCTC 1 cut(s) 280
Eco130I CCWWGG 1 cut(s) 1021
Eco24I GRGCYC 1 cut(s) 282
Eco47I GGWCC 1 cut(s) 1055
Eco53kI GAGCTC 1 cut(s) 280
Eco57I CTGAAG 2 cut(s) 402, 446
EcoICRI GAGCTC 1 cut(s) 280
EcoO109I RGGNCCY 1 cut(s) 1055
EcoRII CCWGG 3 cut(s) 430, 1057, 1095
EcoT14I CCWWGG 1 cut(s) 1021
EcoT38I GRGCYC 1 cut(s) 282
EgeI GGCGCC 1 cut(s) 33
EheI GGCGCC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 1021
FaeI CATG 2 cut(s) 295, 781
FalI AAGNNNNNCTT 6 cut(s) 220, 252, 590, 622, 696, 728
FaqI GGGAC 1 cut(s) 179
FatI CATG 2 cut(s) 291, 777
FauNDI CATATG 1 cut(s) 838
FbaI TGATCA 1 cut(s) 573
FblI GTMKAC 2 cut(s) 47, 857
Fnu4HI GCNGC 7 cut(s) 30, 81, 136, 139, 142, 349, 1004
FokI GGATG 1 cut(s) 938
FriOI GRGCYC 1 cut(s) 282
Fsp4HI GCNGC 7 cut(s) 30, 81, 136, 139, 142, 349, 1004
FspBI CTAG 2 cut(s) 681, 1022
GlaI GCGC 1 cut(s) 33
GluI GCNGC 7 cut(s) 30, 81, 136, 139, 142, 349, 1004
GsuI CTGGAG 1 cut(s) 991
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 3 cut(s) 795, 1020, 1062
HapII CCGG 3 cut(s) 26, 213, 1017
HgaI GACGC 1 cut(s) 161
HhaI GCGC 1 cut(s) 34
Hin1I GRCGYC 3 cut(s) 32, 153, 209
Hin1II CATG 2 cut(s) 295, 781
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HincII GTYRAC 1 cut(s) 48
HindII GTYRAC 1 cut(s) 48
HindIII AAGCTT 1 cut(s) 234
HinfI GANTC 7 cut(s) 16, 44, 49, 60, 147, 461, 727
HpaII CCGG 3 cut(s) 26, 213, 1017
HphI GGTGA 1 cut(s) 79
Hpy166II GTNNAC 4 cut(s) 48, 103, 858, 992
Hpy188I TCNGA 6 cut(s) 315, 557, 562, 614, 813, 1084
Hpy188III TCNNGA 5 cut(s) 213, 458, 713, 923, 970
Hpy8I GTNNAC 4 cut(s) 48, 103, 858, 992
Hpy99I CGWCG 2 cut(s) 155, 211
HpyCH4III ACNGT 1 cut(s) 768
HpyCH4IV ACGT 1 cut(s) 209
HpyCH4V TGCA 9 cut(s) 291, 355, 364, 552, 773, 919, 929, 992, 1109
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 80, 141, 361, 704, 770
HpyF3I CTNAG 2 cut(s) 1068, 1083
HpySE526I ACGT 1 cut(s) 209
Hsp92I GRCGYC 3 cut(s) 32, 153, 209
Hsp92II CATG 2 cut(s) 295, 781
HspAI GCGC 1 cut(s) 32
KasI GGCGCC 1 cut(s) 31
Kpn2I TCCGGA 1 cut(s) 212
Ksp22I TGATCA 1 cut(s) 573
Kzo9I GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
LmnI GCTCC 1 cut(s) 901
Lsp1109I GCAGC 1 cut(s) 335
LweI GCATC 3 cut(s) 561, 916, 928
MabI ACCWGGT 1 cut(s) 1095
MaeI CTAG 2 cut(s) 681, 1022
MaeII ACGT 1 cut(s) 209
MaeIII GTNAC 2 cut(s) 182, 257
MalI GATC 6 cut(s) 559, 575, 645, 810, 835, 1031
MboI GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
MflI RGATCY 1 cut(s) 808
MhlI GDGCHC 3 cut(s) 282, 766, 994
MluCI AATT 6 cut(s) 195, 358, 585, 632, 743, 1120
Mly113I GGCGCC 1 cut(s) 32
MlyI GAGTC 6 cut(s) 10, 43, 53, 54, 141, 455
MroI TCCGGA 1 cut(s) 212
MseI TTAA 1 cut(s) 407
MslI CAYNNNNRTG 3 cut(s) 315, 782, 924
MspI CCGG 3 cut(s) 26, 213, 1017
MspR9I CCNGG 5 cut(s) 26, 432, 1017, 1059, 1097
MvaI CCWGG 3 cut(s) 432, 1059, 1097
MwoI GCNNNNNNNGC 6 cut(s) 38, 80, 141, 361, 704, 770
NarI GGCGCC 1 cut(s) 32
NciI CCSGG 2 cut(s) 26, 1017
NdeI CATATG 1 cut(s) 838
NdeII GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
NlaIII CATG 2 cut(s) 295, 781
NlaIV GGNNCC 4 cut(s) 33, 810, 964, 1056
NmeAIII GCCGAG 3 cut(s) 60, 67, 181
NmuCI GTSAC 1 cut(s) 182
NspI RCATGY 1 cut(s) 781
PaeI GCATGC 1 cut(s) 781
PfeI GAWTC 1 cut(s) 727
PflMI CCANNNNNTGG 1 cut(s) 667
PkrI GCNGC 7 cut(s) 31, 82, 137, 140, 143, 350, 1005
PleI GAGTC 6 cut(s) 10, 43, 52, 54, 141, 455
PluTI GGCGCC 1 cut(s) 35
PpsI GAGTC 6 cut(s) 10, 43, 52, 54, 141, 455
PpuMI RGGWCCY 1 cut(s) 1055
Psp124BI GAGCTC 1 cut(s) 282
Psp5II RGGWCCY 1 cut(s) 1055
Psp6I CCWGG 3 cut(s) 430, 1057, 1095
PspGI CCWGG 3 cut(s) 430, 1057, 1095
PspN4I GGNNCC 4 cut(s) 33, 810, 964, 1056
PspPI GGNCC 3 cut(s) 794, 1055, 1061
PspPPI RGGWCCY 1 cut(s) 1055
PstNI CAGNNNCTG 1 cut(s) 887
PsuI RGATCY 1 cut(s) 808
RsaI GTAC 3 cut(s) 131, 485, 623
RsaNI GTAC 3 cut(s) 130, 484, 622
RseI CAYNNNNRTG 3 cut(s) 315, 782, 924
SacI GAGCTC 1 cut(s) 282
SalI GTCGAC 1 cut(s) 46
SaqAI TTAA 1 cut(s) 407
SatI GCNGC 7 cut(s) 30, 81, 136, 139, 142, 349, 1004
Sau3AI GATC 6 cut(s) 557, 573, 643, 808, 833, 1029
Sau96I GGNCC 3 cut(s) 794, 1055, 1061
SchI GAGTC 6 cut(s) 10, 43, 53, 54, 141, 455
ScrFI CCNGG 5 cut(s) 26, 432, 1017, 1059, 1097
SduI GDGCHC 3 cut(s) 282, 766, 994
SexAI ACCWGGT 1 cut(s) 1095
SfaNI GCATC 3 cut(s) 561, 916, 928
SfcI CTRYAG 1 cut(s) 996
SfoI GGCGCC 1 cut(s) 33
SinI GGWCC 1 cut(s) 1055
SmiMI CAYNNNNRTG 3 cut(s) 315, 782, 924
SmlI CTYRAG 1 cut(s) 713
SmoI CTYRAG 1 cut(s) 713
SphI GCATGC 1 cut(s) 781
Sse9I AATT 6 cut(s) 195, 358, 585, 632, 743, 1120
SsiI CCGC 8 cut(s) 29, 81, 135, 138, 141, 144, 806, 1004
SspDI GGCGCC 1 cut(s) 31
SspMI CTAG 2 cut(s) 681, 1022
SstI GAGCTC 1 cut(s) 282
StyD4I CCNGG 5 cut(s) 24, 430, 1015, 1057, 1095
StyI CCWWGG 1 cut(s) 1021
TaaI ACNGT 1 cut(s) 768
TaiI ACGT 1 cut(s) 212
TaqI TCGA 6 cut(s) 47, 58, 150, 206, 282, 832
TaqII GACCGA 1 cut(s) 170
TasI AATT 6 cut(s) 195, 358, 585, 632, 743, 1120
TatI WGTACW 1 cut(s) 129
TauI GCSGC 6 cut(s) 32, 83, 138, 141, 144, 1006
TfiI GAWTC 1 cut(s) 727
Tru1I TTAA 1 cut(s) 407
Tru9I TTAA 1 cut(s) 407
TscAI CASTG 2 cut(s) 268, 921
TseFI GTSAC 1 cut(s) 182
TseI GCWGC 1 cut(s) 348
Tsp45I GTSAC 1 cut(s) 182
TspDTI ATGAA 5 cut(s) 542, 662, 676, 800, 996
TspRI CASTG 2 cut(s) 268, 921
Van91I CCANNNNNTGG 1 cut(s) 667
VneI GTGCAC 1 cut(s) 990
VpaK11BI GGWCC 1 cut(s) 1055
XapI RAATTY 2 cut(s) 358, 743
XceI RCATGY 1 cut(s) 781
XmaJI CCTAGG 1 cut(s) 1021
XmiI GTMKAC 2 cut(s) 47, 857
XspI CTAG 2 cut(s) 681, 1022
ZraI GACGTC 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.