Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007883

Physical Location & Seq

Genomic Coordinates Forward (+)

23994344 .. 23997772

Gene Structure 3429 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G205200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAGTCAGCACGCGGGCCCGAGGGCCGAGTCGACTCACCACCGACTCTACGAGTTCGCGAAAGCTGCACTCACCAGGATCTTCGTGCATCCTTACGCTACGGTGTGTGAATTGTATTGCGGTGGAGGAGTTGATGCAGAGAAATGGGACGAAGCTCAAATTGGCCATTACATTGGAATTGATGGTTCATCATCTGGAATAAACCAAAGAAGAGAAGCATGGGAGAGCCAGAGGAAGGCTTATACTGCTGATTTTTTTGAGCTTGACCCTTGCATGGAAGATGTAGAGATACATCTGAAAGATCAGACAAACCCGGCAGATTTAGTTTGCTGCTTGAAGAATTTGCAGCTGTGTTTTGAAACTGAGGAGAGAGCAAGGAAACTTTTGCTTAATGTATCATCCTTATTGAAGCCGGGGGGTTATTTTTTTGGTATTACTCCCGACTCATCTACAATATGGGCCAAGTACCAGAAGAATGTTGAAGCATACCACAATAGAAGTAGTGGCATGAAACCAAACATTGTTCCCAACTGCATTAGATCAGAGAACTACATGATCACCTTTGAAGTTGAGGACGAGAAGTTCCCGTTATTTGGAAAGAAATACCAGCTGAAATTTGCTAATGACATCTCTCCCGAAATTCATTGCTTGGTTCATTTCCCGAGCTTCATCAGGTTAGCCAGAGAAGCTGGTCTGGAGTATGTGGAGATTCAAAACTTAACAGAATTTTATGATGACAACAGAGCACAATTTGCAGGCATGATAATGAATTTTGGTCCAAACCTTGTGGATCCTAGAGGAAGGCTTCTTCCTCGATCATATGATGTGTTAGGTCTATATACCACATTTATATTTCAAAAGCCAGACCCTGATGTTGCTCCCCCACTTACGACACCATTGCTGCATGATGTAACTTACATTCAGGATGAGAGAGAGTGGCAAGTGCCAGTGACGACTGTCTGGAGGGATGATGAAAAGAGCGTACCGGTAGAGCCACCTCCTGGCCTGGGCAAGATTAGTGAACAAAAAGGGATTTTGGGTCCTGGCCCTGCTGAGTTGCGTTTTTCTGAGGCACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0004482 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009452 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016740 GO:0016741 GO:0032259 GO:0032991 GO:0034518 GO:0034641 GO:0036260 GO:0036265 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0080009 GO:0090304 GO:0106005 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Pox_MCEL

Protein Analysis

360

Amino Acids

40.84

Weight (kDa)

5.23

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52210 AT3G52210 AT3G52210
fragaria_vesca	FvH4_7g18320 FvH4_7g18320 FvH4_7g18320
malus_domestica	MD01G1099500.v1.1 MD07G1166400.v1.1 MD16G1171900.v1.1
prunus_persica	Prupe.2G205200_v2.0.a1 Prupe.2G205200_v2.0.a1
pyrus_communis	pycom01g12660 pycom07g16170
rosa_chinensis	RchiOBHm_Chr1g0362021
rosa_laevigata	RLG00000027679
rosa_multiflora	Rmu_sc0010614.1_g000007
rosa_roxburghii	Rroxscaffold_4G00294580
rosa_rugosa	Rorug01G0292700 Rorug01G0292800
rosa_samantha	Rh1AG303100 Rh1BG266300 Rh1CG284500 Rh1DG296300
rosa_wichuraiana	Rw1G026990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1001
AccI	GTMKAC	1 cut(s)	32
AccII	CGCG	2 cut(s)	14, 59
AciI	CCGC	2 cut(s)	14, 120
AclWI	GGATC	3 cut(s)	86, 785, 798
AcoI	YGGCCR	1 cut(s)	163
AcsI	RAATTY	5 cut(s)	340, 614, 639, 725, 769
AfaI	GTAC	2 cut(s)	467, 984
AfiI	CCNNNNNNNGG	5 cut(s)	235, 274, 593, 1001, 1007
AgeI	ACCGGT	1 cut(s)	985
AgsI	TTSAA	7 cut(s)	337, 359, 409, 482, 566, 713, 857
AjnI	CCWGG	4 cut(s)	74, 1000, 1005, 1042
AjuI	GAANNNNNNNTTGG	2 cut(s)	144, 176
AloI	GAACNNNNNNTCC	2 cut(s)	566, 598
AluBI	AGCT	7 cut(s)	65, 155, 262, 349, 610, 666, 689
AluI	AGCT	7 cut(s)	65, 155, 262, 349, 610, 666, 689
Alw21I	GWGCWC	1 cut(s)	748
AlwI	GGATC	3 cut(s)	86, 785, 798
AlwNI	CAGNNNCTG	1 cut(s)	869
Ama87I	CYCGRG	2 cut(s)	19, 661
AoxI	GGCC	6 cut(s)	16, 24, 163, 459, 1003, 1045
ApaI	GGGCCC	1 cut(s)	20
ApeKI	GCWGC	4 cut(s)	65, 330, 346, 901
ApoI	RAATTY	5 cut(s)	340, 614, 639, 725, 769
AsiGI	ACCGGT	1 cut(s)	985
AspS9I	GGNCC	7 cut(s)	16, 17, 24, 459, 776, 1040, 1046
AsuC2I	CCSGG	2 cut(s)	314, 414
AsuHPI	GGTGA	3 cut(s)	29, 64, 550
AvaI	CYCGRG	2 cut(s)	19, 661
AvaII	GGWCC	2 cut(s)	776, 1040
BaeGI	GKGCMC	1 cut(s)	20
BalI	TGGCCA	1 cut(s)	165
BamHI	GGATCC	1 cut(s)	790
BanII	GRGCYC	1 cut(s)	20
Bbv12I	GWGCWC	1 cut(s)	748
BbvI	GCAGC	4 cut(s)	52, 317, 358, 888
BccI	CCATC	1 cut(s)	176
BcgI	CGANNNNNNTGC	2 cut(s)	880, 914
BciT130I	CCWGG	4 cut(s)	76, 1002, 1007, 1044
BclI	TGATCA	1 cut(s)	555
BcnI	CCSGG	2 cut(s)	314, 414
BfaI	CTAG	1 cut(s)	795
BisI	GCNGC	4 cut(s)	66, 331, 347, 902
BlsI	GCNGC	4 cut(s)	67, 332, 348, 903
Bme1390I	CCNGG	6 cut(s)	76, 314, 414, 1002, 1007, 1044
Bme18I	GGWCC	2 cut(s)	776, 1040
BmeT110I	CYCGRG	2 cut(s)	19, 661
BmgT120I	GGNCC	7 cut(s)	16, 17, 24, 459, 776, 1040, 1046
BmiI	GGNNCC	3 cut(s)	18, 792, 1041
BmrFI	CCNGG	6 cut(s)	76, 314, 414, 1002, 1007, 1044
BmsI	GCATC	2 cut(s)	97, 124
BoxI	GACNNNNGTC	1 cut(s)	956
BpmI	CTGGAG	2 cut(s)	716, 982
BpuMI	CCSGG	2 cut(s)	314, 414
BsaJI	CCNNGG	3 cut(s)	20, 413, 1006
BsaWI	WCCGGW	1 cut(s)	985
Bsc4I	CCNNNNNNNGG	5 cut(s)	235, 274, 593, 1001, 1007
Bse118I	RCCGGY	1 cut(s)	985
Bse1I	ACTGG	1 cut(s)	947
Bse3DI	GCAATG	2 cut(s)	643, 896
BseBI	CCWGG	4 cut(s)	76, 1002, 1007, 1044
BseDI	CCNNGG	3 cut(s)	20, 413, 1006
BseGI	GGATG	4 cut(s)	88, 398, 931, 973
BseLI	CCNNNNNNNGG	5 cut(s)	235, 274, 593, 1001, 1007
BseMI	GCAATG	2 cut(s)	643, 896
BseMII	CTCAG	3 cut(s)	354, 1044, 1059
BseNI	ACTGG	1 cut(s)	947
BseRI	GAGGAG	2 cut(s)	141, 380
BseSI	GKGCMC	1 cut(s)	20
BseXI	GCAGC	4 cut(s)	52, 317, 358, 888
BsgI	GTGCAG	1 cut(s)	51
Bsh1236I	CGCG	2 cut(s)	14, 59
BshFI	GGCC	6 cut(s)	18, 26, 165, 461, 1005, 1047
BshTI	ACCGGT	1 cut(s)	985
BsiHKAI	GWGCWC	1 cut(s)	748
BsiHKCI	CYCGRG	2 cut(s)	19, 661
BsiSI	CCGG	3 cut(s)	314, 413, 986
BslFI	GGGAC	1 cut(s)	161
BslI	CCNNNNNNNGG	5 cut(s)	235, 274, 593, 1001, 1007
BsmFI	GGGAC	1 cut(s)	161
BsnI	GGCC	6 cut(s)	18, 26, 165, 461, 1005, 1047
BsoBI	CYCGRG	2 cut(s)	19, 661
Bsp120I	GGGCCC	1 cut(s)	16
Bsp1286I	GDGCHC	2 cut(s)	20, 748
Bsp143I	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
Bsp68I	TCGCGA	1 cut(s)	59
BspACI	CCGC	2 cut(s)	14, 120
BspANI	GGCC	6 cut(s)	18, 26, 165, 461, 1005, 1047
BspCNI	CTCAG	3 cut(s)	355, 1045, 1060
BspFNI	CGCG	2 cut(s)	14, 59
BspLI	GGNNCC	3 cut(s)	18, 792, 1041
BspPI	GGATC	3 cut(s)	86, 785, 798
BsrDI	GCAATG	2 cut(s)	643, 896
BsrFI	RCCGGY	1 cut(s)	985
BsrI	ACTGG	1 cut(s)	947
BssAI	RCCGGY	1 cut(s)	985
BssECI	CCNNGG	3 cut(s)	20, 413, 1006
BssMI	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
Bst2UI	CCWGG	4 cut(s)	76, 1002, 1007, 1044
Bst4CI	ACNGT	2 cut(s)	103, 958
Bst6I	CTCTTC	1 cut(s)	205
BstAPI	GCANNNNNTGC	1 cut(s)	752
BstC8I	GCNNGC	3 cut(s)	12, 16, 757
BstDEI	CTNAG	3 cut(s)	363, 1053, 1068
BstF5I	GGATG	4 cut(s)	88, 398, 931, 973
BstFNI	CGCG	2 cut(s)	14, 59
BstKTI	GATC	6 cut(s)	81, 304, 542, 558, 793, 818
BstMBI	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
BstMWI	GCNNNNNNNGC	4 cut(s)	65, 245, 686, 752
BstNI	CCWGG	4 cut(s)	76, 1002, 1007, 1044
BstPAI	GACNNNNGTC	1 cut(s)	956
BstSCI	CCNGG	6 cut(s)	74, 312, 412, 1000, 1005, 1042
BstSLI	GKGCMC	1 cut(s)	20
BstUI	CGCG	2 cut(s)	14, 59
BstV1I	GCAGC	4 cut(s)	52, 317, 358, 888
BstX2I	RGATCY	2 cut(s)	78, 790
BstXI	CCANNNNNNTGG	1 cut(s)	173
BstYI	RGATCY	2 cut(s)	78, 790
BsuRI	GGCC	6 cut(s)	18, 26, 165, 461, 1005, 1047
BtsCI	GGATG	4 cut(s)	88, 398, 931, 973
BtsIMutI	CAGTG	1 cut(s)	954
BtuMI	TCGCGA	1 cut(s)	59
Cac8I	GCNNGC	3 cut(s)	12, 16, 757
CaiI	CAGNNNCTG	1 cut(s)	869
Cfr10I	RCCGGY	1 cut(s)	985
Cfr13I	GGNCC	7 cut(s)	16, 17, 24, 459, 776, 1040, 1046
Csp6I	GTAC	2 cut(s)	466, 983
CspAI	ACCGGT	1 cut(s)	985
CspCI	CAANNNNNGTGG	2 cut(s)	768, 803
CviAII	CATG	6 cut(s)	219, 274, 508, 553, 760, 905
CviQI	GTAC	2 cut(s)	466, 983
DdeI	CTNAG	3 cut(s)	363, 1053, 1068
DpnI	GATC	6 cut(s)	80, 303, 541, 557, 792, 817
DpnII	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
EaeI	YGGCCR	1 cut(s)	163
Eam1104I	CTCTTC	1 cut(s)	205
EarI	CTCTTC	1 cut(s)	205
Eco24I	GRGCYC	1 cut(s)	20
Eco47I	GGWCC	2 cut(s)	776, 1040
Eco88I	CYCGRG	2 cut(s)	19, 661
EcoO109I	RGGNCCY	1 cut(s)	1040
EcoRII	CCWGG	4 cut(s)	74, 1000, 1005, 1042
EcoT38I	GRGCYC	1 cut(s)	20
FaeI	CATG	6 cut(s)	222, 277, 511, 556, 763, 908
FaqI	GGGAC	1 cut(s)	161
FatI	CATG	6 cut(s)	218, 273, 507, 552, 759, 904
FauI	CCCGC	1 cut(s)	7
FauNDI	CATATG	1 cut(s)	820
FbaI	TGATCA	1 cut(s)	555
FblI	GTMKAC	1 cut(s)	32
Fnu4HI	GCNGC	4 cut(s)	66, 331, 347, 902
FokI	GGATG	4 cut(s)	75, 385, 938, 980
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	4 cut(s)	66, 331, 347, 902
FspBI	CTAG	1 cut(s)	795
GluI	GCNGC	4 cut(s)	66, 331, 347, 902
GsuI	CTGGAG	2 cut(s)	716, 982
HaeIII	GGCC	6 cut(s)	18, 26, 165, 461, 1005, 1047
HapII	CCGG	3 cut(s)	314, 413, 986
Hin1II	CATG	6 cut(s)	222, 277, 511, 556, 763, 908
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HinfI	GANTC	6 cut(s)	4, 29, 34, 45, 443, 709
HpaII	CCGG	3 cut(s)	314, 413, 986
HphI	GGTGA	3 cut(s)	29, 64, 550
Hpy166II	GTNNAC	2 cut(s)	33, 1022
Hpy188I	TCNGA	4 cut(s)	297, 306, 544, 1069
Hpy188III	TCNNGA	8 cut(s)	58, 195, 440, 635, 661, 695, 923, 961
Hpy8I	GTNNAC	2 cut(s)	33, 1022
HpyAV	CCTTC	2 cut(s)	229, 795
HpyCH4III	ACNGT	2 cut(s)	103, 958
HpyCH4V	TGCA	8 cut(s)	68, 88, 137, 273, 346, 534, 755, 904
HpyF10VI	GCNNNNNNNGC	4 cut(s)	65, 245, 686, 752
HpyF3I	CTNAG	3 cut(s)	363, 1053, 1068
Hsp92II	CATG	6 cut(s)	222, 277, 511, 556, 763, 908
Ksp22I	TGATCA	1 cut(s)	555
Kzo9I	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
LmnI	GCTCC	1 cut(s)	883
Lsp1109I	GCAGC	4 cut(s)	52, 317, 358, 888
LweI	GCATC	2 cut(s)	97, 124
MaeI	CTAG	1 cut(s)	795
MaeIII	GTNAC	2 cut(s)	910, 949
MalI	GATC	6 cut(s)	80, 303, 541, 557, 792, 817
MboI	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
MboII	GAAGA	6 cut(s)	73, 222, 290, 349, 484, 800
MflI	RGATCY	2 cut(s)	78, 790
MhlI	GDGCHC	2 cut(s)	20, 748
MlsI	TGGCCA	1 cut(s)	165
MluCI	AATT	9 cut(s)	110, 159, 177, 340, 614, 639, 725, 749, 769
MluNI	TGGCCA	1 cut(s)	165
MlyI	GAGTC	5 cut(s)	13, 28, 38, 39, 437
Mox20I	TGGCCA	1 cut(s)	165
MscI	TGGCCA	1 cut(s)	165
MseI	TTAA	2 cut(s)	390, 719
MslI	CAYNNNNRTG	1 cut(s)	764
Msp20I	TGGCCA	1 cut(s)	165
MspA1I	CMGCKG	2 cut(s)	349, 610
MspI	CCGG	3 cut(s)	314, 413, 986
MspR9I	CCNGG	6 cut(s)	76, 314, 414, 1002, 1007, 1044
MvaI	CCWGG	4 cut(s)	76, 1002, 1007, 1044
MvnI	CGCG	2 cut(s)	14, 59
MwoI	GCNNNNNNNGC	4 cut(s)	65, 245, 686, 752
NciI	CCSGG	2 cut(s)	314, 414
NdeI	CATATG	1 cut(s)	820
NdeII	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
NlaIII	CATG	6 cut(s)	222, 277, 511, 556, 763, 908
NlaIV	GGNNCC	3 cut(s)	18, 792, 1041
NmeAIII	GCCGAG	1 cut(s)	52
NmuCI	GTSAC	1 cut(s)	949
NruI	TCGCGA	1 cut(s)	59
PfeI	GAWTC	1 cut(s)	709
PflMI	CCANNNNNTGG	1 cut(s)	1001
PinAI	ACCGGT	1 cut(s)	985
PkrI	GCNGC	4 cut(s)	67, 332, 348, 903
PleI	GAGTC	5 cut(s)	12, 28, 37, 39, 437
PpsI	GAGTC	5 cut(s)	12, 28, 37, 39, 437
PpuMI	RGGWCCY	1 cut(s)	1040
PshAI	GACNNNNGTC	1 cut(s)	956
Psp5II	RGGWCCY	1 cut(s)	1040
Psp6I	CCWGG	4 cut(s)	74, 1000, 1005, 1042
PspGI	CCWGG	4 cut(s)	74, 1000, 1005, 1042
PspN4I	GGNNCC	3 cut(s)	18, 792, 1041
PspOMI	GGGCCC	1 cut(s)	16
PspPI	GGNCC	7 cut(s)	16, 17, 24, 459, 776, 1040, 1046
PspPPI	RGGWCCY	1 cut(s)	1040
PstNI	CAGNNNCTG	1 cut(s)	869
PsuI	RGATCY	2 cut(s)	78, 790
PvuII	CAGCTG	2 cut(s)	349, 610
RruI	TCGCGA	1 cut(s)	59
RsaI	GTAC	2 cut(s)	467, 984
RsaNI	GTAC	2 cut(s)	466, 983
RseI	CAYNNNNRTG	1 cut(s)	764
SalI	GTCGAC	1 cut(s)	31
SaqAI	TTAA	2 cut(s)	390, 719
SatI	GCNGC	4 cut(s)	66, 331, 347, 902
Sau3AI	GATC	6 cut(s)	78, 301, 539, 555, 790, 815
Sau96I	GGNCC	7 cut(s)	16, 17, 24, 459, 776, 1040, 1046
SchI	GAGTC	5 cut(s)	13, 28, 38, 39, 437
ScrFI	CCNGG	6 cut(s)	76, 314, 414, 1002, 1007, 1044
SduI	GDGCHC	2 cut(s)	20, 748
SfaNI	GCATC	2 cut(s)	97, 124
SinI	GGWCC	2 cut(s)	776, 1040
SmiMI	CAYNNNNRTG	1 cut(s)	764
Sse9I	AATT	9 cut(s)	110, 159, 177, 340, 614, 639, 725, 749, 769
SsiI	CCGC	2 cut(s)	14, 120
SspMI	CTAG	1 cut(s)	795
StyD4I	CCNGG	6 cut(s)	74, 312, 412, 1000, 1005, 1042
TaaI	ACNGT	2 cut(s)	103, 958
TaqI	TCGA	2 cut(s)	32, 814
TasI	AATT	9 cut(s)	110, 159, 177, 340, 614, 639, 725, 749, 769
TfiI	GAWTC	1 cut(s)	709
Tru1I	TTAA	2 cut(s)	390, 719
Tru9I	TTAA	2 cut(s)	390, 719
TscAI	CASTG	1 cut(s)	954
TseFI	GTSAC	1 cut(s)	949
TseI	GCWGC	4 cut(s)	65, 330, 346, 901
Tsp45I	GTSAC	1 cut(s)	949
TspDTI	ATGAA	7 cut(s)	177, 524, 632, 644, 658, 782, 987
TspRI	CASTG	1 cut(s)	954
Van91I	CCANNNNNTGG	1 cut(s)	1001
VpaK11BI	GGWCC	2 cut(s)	776, 1040
XapI	RAATTY	5 cut(s)	340, 614, 639, 725, 769
XmiI	GTMKAC	1 cut(s)	32
XspI	CTAG	1 cut(s)	795

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.