FvH4_7g18340

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0017363
Physical Location & Seq
Reverse (-)
15316700 .. 15319419
2720 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18340.t1

Sequence Viewer

Length: 1878 bp
ATGCGTCCTCTGTTAAAGCCACTACTACCCCGAAACCCATGTTCCATCTTAGACTATGCCCCAATTTTCCAATCCTTGACTGGCCAAAACTTGTTGAAGCTAGGCCAACAGGTCCACACCCATATGATCCTACATGGGTTCGAACCCAATGCCTATCTTGGCGCCAAGATGGTTGCCATGTACGCCAGCTCCGGCGATCTCGCCTCAGCTGTGAATGTGTTTCATAGCGTAAACTACCCATCTACACTTTTGTATAACTCGATTATTAGGGCTCATACTCTTCATGGTTACATTGCGAAAAGTATCGAAATTTATGGACAGATGCATTGTTTGGGACTAAAGGGTGACCATTTCACCTACCCTTTTGTGCTCAAGTGTTGTGCTGAGTTGTCTGATGTTCGTATTGGGAAATGTGTTCATGGGTTGAGCTTGAGAACTGGGTTGGAGTCTGATGTGTATGTTGGGACTTCTTTGATTGACATGTATGTGAAATGTTGTGAGATGAGCAATGCACGTATGGTGTTTGATGAATTGTCTGTGAGAGGAGTTTCGTCGTGGAATGCGATGATTGCTGGGTACATGAGAGAGGGAGAGATTTGTGTTGCTGAGGAGTTGTTTGGGGAAATGAGGTGCAAGAATATTGTGTCTTGGACTGCTATGATATCGGGGTATACGCAGAACGGGATGGCTGAGCAGGCATTGGGTGTGTTTGATGAGATGTTGAGGGAAGATTCGGAGGTTAAGCCGAATTGGGTGACGGTAATGAGTGTACTTCCTGGGTGTGCACATTCGGCTGCGCTAGAGCGGGGGAGGAAGATTCACGAGTTTGCTAGAGGGATTGGTTTGGAGAAGAATGCTTCCATACAGACGGCGCTGGTGGCAATGTATGCTAAATGTGGGAGCCTTTCTGAGGCTCGTCAGTGTTTTCAGAGGATTAGTGGAAGTGAGAAGAGTTTGGTTGTGTGGAATACTATGATCACTGCTTATGCGTCCCATGCACGCGGATCAGAAGCTGTGTCCACTTTTGAGGACATGGTGAGAGCTGGTGTTCAACCTGATCACATAACATTCACGGGATTGTTATCTGGTTGCAGTCATTCGGGGCTTGTTGATGTTGGCTTAAAATACTTTGATGGCATGAAGACAGTATACTCTGTTGAACCAAGAGTCGAACATTATGCTTGTGTTGTTGATCTATTGGGTCGTGCAGGGCGATTGATGGAGGCAATGGATGTTGTACATAAAATGCCAATGCAAGCAGGGCCAAGCATTTGGGGCGCACTGTTATCAGCTTGTCGAAACCACTCAAACTTGGACATTGCTGAAACTGCAGCCAGAAATCTCTTCATTTTAGAACCAGACAACAGTGGCAATTATGTCCTGCTATCAAATATATATGCTGAAGCTGGCATGTGGAAGGAGGTGGACAAATTGAGAATTCTATTAAAATCTCAAGGGATGAAGAAGAGCCCTGGATGCAGTTGGATAGAGGTCAATGGGAAAGCCCATCTGTTTCTTGGTGGAGATACATCTCATCCTCAAGCAAAGGAAGTTTACATGTTACTGGAGGAGTTACCGAAAAAAATGAAGGCGGCTGGTTATGTACCTGACACTAGGTTTTCTTTGCATGATGTTAGTGAAGAGGAGAAAGAACATAACCTTACAACCCACAGTGAAAAGCTTGCCATTGCCTTTGGACTTCTTAACACTGCTCCTGGAGTGGTTCTTCGTGTGACAAAGAACCTTAGAATTTGTGGAGATTGTCATACAGCCACCAAGTTCATATCTATGATCTATGGGAGGGAGATTATCGTAAGAGATGTGAATCGATTCCATCACTTTAAAGACGGGTACTGTTCCTGTGGAGATTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

626

Amino Acids

69.21

Weight (kDa)

6.79

Isoelectric Point (pI)

33.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 182 - 214 7.2e-06 PPR repeat family
PPR_2 PF13041 212 - 263 8.5e-10 PPR repeat family
PPR PF01535 215 - 243 1e-08 PPR repeat
PPR_2 PF13041 318 - 365 4e-13 PPR repeat family
PPR PF01535 320 - 350 5.8e-06 PPR repeat
E_motif PF20431 435 - 497 1.7e-26 E motif
DYW_deaminase PF14432 533 - 625 6.3e-44 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017363)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18340
malus_domestica MD07G1165900.v1.1
prunus_persica Prupe.2G205400_v2.0.a1
pyrus_communis pycom07g16150
rosa_chinensis RchiOBHm_Chr1g0362051
rosa_laevigata RLG00000002139 RLG00000027677
rosa_multiflora Rmu_sc0010614.1_g000005 Rmu_sc0020775.1_g000001
rosa_roxburghii Rroxscaffold_4G00294570
rosa_rugosa Rorug01G0293100
rosa_samantha Rh1BG266600
rosa_wichuraiana Rw1G027010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 161
AccBSI CCGCTC 1 cut(s) 805
AccI GTMKAC 2 cut(s) 671, 1149
AccII CGCG 1 cut(s) 1002
AciI CCGC 3 cut(s) 805, 1002, 1592
AclWI GGATC 2 cut(s) 121, 1012
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 3 cut(s) 309, 1437, 1749
AcuI CTGAAG 1 cut(s) 1422
AcyI GRCGYC 1 cut(s) 162
AfaI GTAC 6 cut(s) 182, 578, 771, 1239, 1605, 1853
AfiI CCNNNNNNNGG 1 cut(s) 910
AflIII ACRYGT 2 cut(s) 480, 1557
AgsI TTSAA 3 cut(s) 97, 1052, 1160
AjnI CCWGG 3 cut(s) 775, 1471, 1714
AluBI AGCT 9 cut(s) 100, 189, 209, 429, 1013, 1043, 1292, 1406, 1681
AluI AGCT 9 cut(s) 100, 189, 209, 429, 1013, 1043, 1292, 1406, 1681
Alw21I GWGCWC 2 cut(s) 372, 787
Alw44I GTGCAC 1 cut(s) 783
AlwI GGATC 2 cut(s) 121, 1012
AlwNI CAGNNNCTG 1 cut(s) 1013
AoxI GGCC 3 cut(s) 82, 103, 1262
ApaLI GTGCAC 1 cut(s) 783
ApeKI GCWGC 2 cut(s) 794, 1331
ApoI RAATTY 3 cut(s) 309, 1437, 1749
Asp700I GAANNNNTTC 1 cut(s) 1829
AspLEI GCGC 4 cut(s) 164, 799, 874, 1280
AspS9I GGNCC 2 cut(s) 112, 1262
AsuHPI GGTGA 4 cut(s) 346, 356, 766, 1048
AsuII TTCGAA 1 cut(s) 141
AvaII GGWCC 1 cut(s) 112
BaeGI GKGCMC 1 cut(s) 787
BalI TGGCCA 1 cut(s) 84
BanI GGYRCC 1 cut(s) 161
BanII GRGCYC 2 cut(s) 274, 1472
BarI GAAGNNNNNNTAC 2 cut(s) 1133, 1165
BauI CACGAG 1 cut(s) 821
BbsI GAAGAC 1 cut(s) 1148
Bbv12I GWGCWC 2 cut(s) 372, 787
BbvCI CCTCAGC 2 cut(s) 205, 606
BbvI GCAGC 2 cut(s) 781, 1343
BccI CCATC 8 cut(s) 53, 163, 247, 679, 1127, 1213, 1515, 1842
BceAI ACGGC 1 cut(s) 885
BcgI CGANNNNNNTGC 4 cut(s) 131, 165, 1160, 1194
BciT130I CCWGG 3 cut(s) 777, 1473, 1716
BclI TGATCA 2 cut(s) 975, 1057
BfaI CTAG 4 cut(s) 101, 800, 831, 1614
BfmI CTRYAG 1 cut(s) 1329
BfoI RGCGCY 2 cut(s) 165, 875
BisI GCNGC 3 cut(s) 795, 1332, 1593
BlpI GCTNAGC 1 cut(s) 690
BlsI GCNGC 3 cut(s) 796, 1333, 1594
Bme1390I CCNGG 3 cut(s) 777, 1473, 1716
Bme18I GGWCC 1 cut(s) 112
BmgT120I GGNCC 2 cut(s) 112, 1262
BmiI GGNNCC 2 cut(s) 163, 902
BmrFI CCNGG 3 cut(s) 777, 1473, 1716
BmrI ACTGGG 1 cut(s) 447
BmsI GCATC 2 cut(s) 312, 1466
BmuI ACTGGG 1 cut(s) 447
BpiI GAAGAC 1 cut(s) 1148
BpmI CTGGAG 2 cut(s) 1586, 1737
Bpu10I CCTNAGC 2 cut(s) 205, 606
Bpu1102I GCTNAGC 1 cut(s) 690
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 4 cut(s) 356, 451, 1437, 1524
Bsa29I ATCGAT 1 cut(s) 1828
BsaAI YACGTR 1 cut(s) 515
BsaBI GATNNNNATC 2 cut(s) 1081, 1824
BsaHI GRCGYC 1 cut(s) 162
BsaJI CCNNGG 2 cut(s) 776, 1471
BsaXI ACNNNNNCTCC 2 cut(s) 173, 203
Bsc4I CCNNNNNNNGG 1 cut(s) 910
Bse1I ACTGG 3 cut(s) 85, 442, 1569
Bse3DI GCAATG 6 cut(s) 291, 514, 888, 1233, 1317, 1686
Bse8I GATNNNNATC 2 cut(s) 1081, 1824
BseBI CCWGG 3 cut(s) 777, 1473, 1716
BseCI ATCGAT 1 cut(s) 1828
BseDI CCNNGG 2 cut(s) 776, 1471
BseGI GGATG 5 cut(s) 690, 1237, 1464, 1481, 1534
BseJI GATNNNNATC 2 cut(s) 1081, 1824
BseLI CCNNNNNNNGG 1 cut(s) 910
BseMI GCAATG 6 cut(s) 291, 514, 888, 1233, 1317, 1686
BseMII CTCAG 5 cut(s) 219, 375, 597, 681, 900
BseNI ACTGG 3 cut(s) 85, 442, 1569
BseRI GAGGAG 4 cut(s) 558, 623, 1583, 1658
BseSI GKGCMC 1 cut(s) 787
BseXI GCAGC 2 cut(s) 781, 1343
BseYI CCCAGC 1 cut(s) 572
BsgI GTGCAG 1 cut(s) 1227
Bsh1236I CGCG 1 cut(s) 1002
BshFI GGCC 3 cut(s) 84, 105, 1264
BshNI GGYRCC 1 cut(s) 161
BshVI ATCGAT 1 cut(s) 1828
BsiHKAI GWGCWC 2 cut(s) 372, 787
BsiSI CCGG 1 cut(s) 192
BslFI GGGAC 3 cut(s) 348, 478, 976
BslI CCNNNNNNNGG 1 cut(s) 910
BsmFI GGGAC 3 cut(s) 348, 478, 976
BsmI GAATGC 2 cut(s) 565, 859
BsnI GGCC 3 cut(s) 84, 105, 1264
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 4 cut(s) 274, 372, 787, 1472
Bsp1407I TGTACA 1 cut(s) 1237
Bsp143I GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
Bsp1720I GCTNAGC 1 cut(s) 690
BspACI CCGC 3 cut(s) 805, 1002, 1592
BspANI GGCC 3 cut(s) 84, 105, 1264
BspCNI CTCAG 5 cut(s) 218, 376, 598, 682, 901
BspDI ATCGAT 1 cut(s) 1828
BspFNI CGCG 1 cut(s) 1002
BspLI GGNNCC 2 cut(s) 163, 902
BspMAI CTGCAG 1 cut(s) 1333
BspPI GGATC 2 cut(s) 121, 1012
BspQI GCTCTTC 1 cut(s) 1460
BspT104I TTCGAA 1 cut(s) 141
BspT107I GGYRCC 1 cut(s) 161
BsrBI CCGCTC 1 cut(s) 805
BsrDI GCAATG 6 cut(s) 291, 514, 888, 1233, 1317, 1686
BsrGI TGTACA 1 cut(s) 1237
BsrI ACTGG 3 cut(s) 85, 442, 1569
BssECI CCNNGG 2 cut(s) 776, 1471
BssMI GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
BssNAI GTATAC 2 cut(s) 672, 1150
BssNI GRCGYC 1 cut(s) 162
BssSI CACGAG 1 cut(s) 821
Bst1107I GTATAC 2 cut(s) 672, 1150
Bst2BI CACGAG 1 cut(s) 821
Bst2UI CCWGG 3 cut(s) 777, 1473, 1716
Bst4CI ACNGT 6 cut(s) 760, 1147, 1284, 1367, 1673, 1856
Bst6I CTCTTC 5 cut(s) 285, 944, 1349, 1460, 1635
BstACI GRCGYC 1 cut(s) 162
BstAPI GCANNNNNTGC 1 cut(s) 887
BstAUI TGTACA 1 cut(s) 1237
BstBAI YACGTR 1 cut(s) 515
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 6 cut(s) 187, 696, 1000, 1257, 1408, 1683
BstDEI CTNAG 7 cut(s) 49, 205, 384, 606, 690, 909, 1745
BstEII GGTNACC 1 cut(s) 344
BstENI CCTNNNNNAGG 1 cut(s) 908
BstF5I GGATG 5 cut(s) 690, 1237, 1464, 1481, 1534
BstFNI CGCG 1 cut(s) 1002
BstH2I RGCGCY 2 cut(s) 165, 875
BstHHI GCGC 4 cut(s) 164, 799, 874, 1280
BstKTI GATC 7 cut(s) 129, 199, 978, 1007, 1060, 1195, 1794
BstMBI GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
BstNI CCWGG 3 cut(s) 777, 1473, 1716
BstNSI RCATGY 3 cut(s) 484, 1414, 1561
BstPI GGTNACC 1 cut(s) 344
BstSCI CCNGG 3 cut(s) 775, 1471, 1714
BstSFI CTRYAG 1 cut(s) 1329
BstSLI GKGCMC 1 cut(s) 787
BstUI CGCG 1 cut(s) 1002
BstV1I GCAGC 2 cut(s) 781, 1343
BstV2I GAAGAC 1 cut(s) 1148
BstXI CCANNNNNNTGG 1 cut(s) 1272
BstZ17I GTATAC 2 cut(s) 672, 1150
Bsu15I ATCGAT 1 cut(s) 1828
BsuRI GGCC 3 cut(s) 84, 105, 1264
BsuTUI ATCGAT 1 cut(s) 1828
BtgZI GCGATG 1 cut(s) 578
BtsCI GGATG 5 cut(s) 690, 1237, 1464, 1481, 1534
BtsI GCAGTG 2 cut(s) 978, 1707
BtsIMutI CAGTG 6 cut(s) 926, 978, 1280, 1372, 1678, 1707
Cac8I GCNNGC 6 cut(s) 187, 696, 1000, 1257, 1408, 1683
CaiI CAGNNNCTG 1 cut(s) 1013
CfoI GCGC 4 cut(s) 164, 799, 874, 1280
Cfr13I GGNCC 2 cut(s) 112, 1262
ClaI ATCGAT 1 cut(s) 1828
CseI GACGC 1 cut(s) 978
Csp6I GTAC 6 cut(s) 181, 577, 770, 1238, 1604, 1852
CviQI GTAC 6 cut(s) 181, 577, 770, 1238, 1604, 1852
DdeI CTNAG 7 cut(s) 49, 205, 384, 606, 690, 909, 1745
DinI GGCGCC 1 cut(s) 163
DpnI GATC 7 cut(s) 128, 198, 977, 1006, 1059, 1194, 1793
DpnII GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
DraI TTTAAA 1 cut(s) 1843
EaeI YGGCCR 1 cut(s) 82
Eam1104I CTCTTC 5 cut(s) 285, 944, 1349, 1460, 1635
EarI CTCTTC 5 cut(s) 285, 944, 1349, 1460, 1635
Eco24I GRGCYC 2 cut(s) 274, 1472
Eco32I GATATC 1 cut(s) 663
Eco47I GGWCC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 1422
Eco91I GGTNACC 1 cut(s) 344
EcoNI CCTNNNNNAGG 1 cut(s) 908
EcoO65I GGTNACC 1 cut(s) 344
EcoRI GAATTC 1 cut(s) 1437
EcoRII CCWGG 3 cut(s) 775, 1471, 1714
EcoRV GATATC 1 cut(s) 663
EcoT22I ATGCAT 1 cut(s) 327
EcoT38I GRGCYC 2 cut(s) 274, 1472
EgeI GGCGCC 1 cut(s) 163
EheI GGCGCC 1 cut(s) 163
FaqI GGGAC 3 cut(s) 348, 478, 976
FauI CCCGC 1 cut(s) 798
FauNDI CATATG 1 cut(s) 123
FbaI TGATCA 2 cut(s) 975, 1057
FblI GTMKAC 2 cut(s) 671, 1149
Fnu4HI GCNGC 3 cut(s) 795, 1332, 1593
FokI GGATG 5 cut(s) 697, 1244, 1471, 1488, 1521
FriOI GRGCYC 2 cut(s) 274, 1472
Fsp4HI GCNGC 3 cut(s) 795, 1332, 1593
FspBI CTAG 4 cut(s) 101, 800, 831, 1614
GlaI GCGC 4 cut(s) 163, 798, 873, 1279
GluI GCNGC 3 cut(s) 795, 1332, 1593
GsaI CCCAGC 1 cut(s) 576
GsuI CTGGAG 2 cut(s) 1586, 1737
HaeII RGCGCY 2 cut(s) 165, 875
HaeIII GGCC 3 cut(s) 84, 105, 1264
HapII CCGG 1 cut(s) 192
HgaI GACGC 1 cut(s) 978
HhaI GCGC 4 cut(s) 164, 799, 874, 1280
Hin1I GRCGYC 1 cut(s) 162
Hin6I GCGC 4 cut(s) 162, 797, 872, 1278
HinP1I GCGC 4 cut(s) 162, 797, 872, 1278
HindIII AAGCTT 1 cut(s) 1679
HinfI GANTC 6 cut(s) 446, 731, 817, 1167, 1825, 1830
HpaII CCGG 1 cut(s) 192
HphI GGTGA 4 cut(s) 346, 356, 766, 1048
Hpy166II GTNNAC 9 cut(s) 115, 232, 672, 770, 785, 1020, 1150, 1426, 1555
Hpy188I TCNGA 6 cut(s) 394, 451, 736, 910, 930, 1009
Hpy188III TCNNGA 1 cut(s) 821
Hpy8I GTNNAC 9 cut(s) 115, 232, 672, 770, 785, 1020, 1150, 1426, 1555
Hpy99I CGWCG 1 cut(s) 556
HpyAV CCTTC 2 cut(s) 1411, 1582
HpyCH4III ACNGT 6 cut(s) 760, 1147, 1284, 1367, 1673, 1856
HpyCH4IV ACGT 1 cut(s) 514
HpyF3I CTNAG 7 cut(s) 49, 205, 384, 606, 690, 909, 1745
HpySE526I ACGT 1 cut(s) 514
Hsp92I GRCGYC 1 cut(s) 162
HspAI GCGC 4 cut(s) 162, 797, 872, 1278
KasI GGCGCC 1 cut(s) 161
Ksp22I TGATCA 2 cut(s) 975, 1057
Kzo9I GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
LguI GCTCTTC 1 cut(s) 1460
LmnI GCTCC 3 cut(s) 194, 900, 1717
Lsp1109I GCAGC 2 cut(s) 781, 1343
LweI GCATC 2 cut(s) 312, 1466
MaeI CTAG 4 cut(s) 101, 800, 831, 1614
MaeII ACGT 1 cut(s) 514
MaeIII GTNAC 6 cut(s) 287, 344, 754, 1560, 1572, 1732
MalI GATC 7 cut(s) 128, 198, 977, 1006, 1059, 1194, 1793
MbiI CCGCTC 1 cut(s) 805
MboI GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
MhlI GDGCHC 4 cut(s) 274, 372, 787, 1472
MlsI TGGCCA 1 cut(s) 84
MluCI AATT 8 cut(s) 63, 309, 530, 748, 1372, 1430, 1437, 1749
MluNI TGGCCA 1 cut(s) 84
Mly113I GGCGCC 1 cut(s) 162
MlyI GAGTC 2 cut(s) 455, 1176
MmeI TCCRAC 2 cut(s) 423, 1463
Mox20I TGGCCA 1 cut(s) 84
Mph1103I ATGCAT 1 cut(s) 327
MroXI GAANNNNTTC 1 cut(s) 1829
MscI TGGCCA 1 cut(s) 84
MseI TTAA 6 cut(s) 14, 741, 1121, 1445, 1704, 1842
MslI CAYNNNNRTG 3 cut(s) 122, 485, 1787
Msp20I TGGCCA 1 cut(s) 84
MspA1I CMGCKG 1 cut(s) 209
MspI CCGG 1 cut(s) 192
MspR9I CCNGG 3 cut(s) 777, 1473, 1716
Mva1269I GAATGC 2 cut(s) 565, 859
MvaI CCWGG 3 cut(s) 777, 1473, 1716
MvnI CGCG 1 cut(s) 1002
NarI GGCGCC 1 cut(s) 162
NdeI CATATG 1 cut(s) 123
NdeII GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
NlaIV GGNNCC 2 cut(s) 163, 902
NmuCI GTSAC 3 cut(s) 344, 754, 1732
NsiI ATGCAT 1 cut(s) 327
NspI RCATGY 3 cut(s) 484, 1414, 1561
NspV TTCGAA 1 cut(s) 141
PciI ACATGT 2 cut(s) 480, 1557
PciSI GCTCTTC 1 cut(s) 1460
PcsI WCGNNNNNNNCGW 2 cut(s) 560, 1210
PctI GAATGC 2 cut(s) 565, 859
PdmI GAANNNNTTC 1 cut(s) 1829
PfeI GAWTC 4 cut(s) 731, 817, 1825, 1830
PfoI TCCNGGA 1 cut(s) 1714
PkrI GCNGC 3 cut(s) 796, 1333, 1594
PleI GAGTC 2 cut(s) 454, 1175
PluTI GGCGCC 1 cut(s) 165
PpsI GAGTC 2 cut(s) 454, 1175
Ppu21I YACGTR 1 cut(s) 515
PscI ACATGT 2 cut(s) 480, 1557
Psp6I CCWGG 3 cut(s) 775, 1471, 1714
PspEI GGTNACC 1 cut(s) 344
PspFI CCCAGC 1 cut(s) 572
PspGI CCWGG 3 cut(s) 775, 1471, 1714
PspN4I GGNNCC 2 cut(s) 163, 902
PspPI GGNCC 2 cut(s) 112, 1262
PstI CTGCAG 1 cut(s) 1333
PstNI CAGNNNCTG 1 cut(s) 1013
PvuII CAGCTG 1 cut(s) 209
RsaI GTAC 6 cut(s) 182, 578, 771, 1239, 1605, 1853
RsaNI GTAC 6 cut(s) 181, 577, 770, 1238, 1604, 1852
RseI CAYNNNNRTG 3 cut(s) 122, 485, 1787
SapI GCTCTTC 1 cut(s) 1460
SaqAI TTAA 6 cut(s) 14, 741, 1121, 1445, 1704, 1842
SatI GCNGC 3 cut(s) 795, 1332, 1593
Sau3AI GATC 7 cut(s) 126, 196, 975, 1004, 1057, 1192, 1791
Sau96I GGNCC 2 cut(s) 112, 1262
SchI GAGTC 2 cut(s) 455, 1176
ScrFI CCNGG 3 cut(s) 777, 1473, 1716
SduI GDGCHC 4 cut(s) 274, 372, 787, 1472
SfaNI GCATC 2 cut(s) 312, 1466
SfcI CTRYAG 1 cut(s) 1329
SfoI GGCGCC 1 cut(s) 163
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 1 cut(s) 112
SmiMI CAYNNNNRTG 3 cut(s) 122, 485, 1787
SmlI CTYRAG 4 cut(s) 371, 430, 1452, 1539
SmoI CTYRAG 4 cut(s) 371, 430, 1452, 1539
Sse9I AATT 8 cut(s) 63, 309, 530, 748, 1372, 1430, 1437, 1749
SsiI CCGC 3 cut(s) 805, 1002, 1592
SspDI GGCGCC 1 cut(s) 161
SspI AATATT 1 cut(s) 640
SspMI CTAG 4 cut(s) 101, 800, 831, 1614
StyD4I CCNGG 3 cut(s) 775, 1471, 1714
TaaI ACNGT 6 cut(s) 760, 1147, 1284, 1367, 1673, 1856
TaiI ACGT 1 cut(s) 517
TaqI TCGA 6 cut(s) 141, 260, 306, 1170, 1297, 1828
TasI AATT 8 cut(s) 63, 309, 530, 748, 1372, 1430, 1437, 1749
TatI WGTACW 2 cut(s) 769, 1237
TauI GCSGC 1 cut(s) 1595
TfiI GAWTC 4 cut(s) 731, 817, 1825, 1830
Tru1I TTAA 6 cut(s) 14, 741, 1121, 1445, 1704, 1842
Tru9I TTAA 6 cut(s) 14, 741, 1121, 1445, 1704, 1842
TscAI CASTG 6 cut(s) 926, 985, 1287, 1372, 1678, 1714
TseFI GTSAC 3 cut(s) 344, 754, 1732
TseI GCWGC 2 cut(s) 794, 1331
Tsp45I GTSAC 3 cut(s) 344, 754, 1732
TspDTI ATGAA 9 cut(s) 212, 272, 407, 543, 1154, 1336, 1475, 1601, 1771
TspRI CASTG 6 cut(s) 926, 985, 1287, 1372, 1678, 1714
VneI GTGCAC 1 cut(s) 783
VpaK11BI GGWCC 1 cut(s) 112
XagI CCTNNNNNAGG 1 cut(s) 908
XapI RAATTY 3 cut(s) 309, 1437, 1749
XceI RCATGY 3 cut(s) 484, 1414, 1561
XcmI CCANNNNNNNNNTGG 2 cut(s) 77, 1514
XmiI GTMKAC 2 cut(s) 671, 1149
XmnI GAANNNNTTC 1 cut(s) 1829
XspI CTAG 4 cut(s) 101, 800, 831, 1614
Zsp2I ATGCAT 1 cut(s) 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.