RLG00000027677

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0017363
Physical Location & Seq
Forward (+)
13853317 .. 13855194
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027677

Sequence Viewer

Length: 1545 bp
ATGCGTACTCTGTTAAAGCCACTACTAGCACAAAACCCATGTTGCATCTTAGACTATGCACCAATTTTCCAATCCTTAACTGGGCAAAACTTGTTGAAGCTAGGCCAACAGGTCCACACCCATATGGTCCTGCGAGGACTCGAACCCAATGCCTATCTTGGCGCCAAAATAGTTGCAATGTACGCCAGCTCTGGTGATCTACACTCAGCTGTAAATGTGTTTCACAGAGTAAAATACCCATCTCCACTTTTGTACAATTCGATTATTCGGGCTTATACCCTTCATGGTTACTCTGCAAGAACTATGGAAATTTATAGTCAGATGCATTGTTTAGGCCTAAAGGGTGATCATTTTACCTACCCTTTTGTGCTCAAGTGTTGTGCAGAGTTGTCGAATATTTGGATAGGGAAATGTGTTCATGGGCTGAGCTTGAGAACTGGGTTGGAGTCCGATATGTATGTTGGGACTTCTTTGATTGACATGTATGTGAAATGTTGTGAGATGGGGAGTGCACGTAAGCTGTTCGATGAAATGTCTGTTAGAGACGTTTCGTCATGGAATGCATTGATTGCGGGGTACATGAGAGAGGGTGAGATTTGTTCTGCTGAGGAGTTGTTTGGACAAATGAGGTGCAAGAATATTGTGTCTTGGACTGCTATGATATCGGGGTATGCGCAGAATGGGCTGGCTGAGCAGGCATTGAGTGTGTTTGATGAGATGTTGAAGAAAGATTCGGAGGTTAAGCCGAATTGGGTGACAGTAATGAGTGTTCTTCCTGCATGTGCACATTCGGCTGCGCTAGAGCGGGGGAGGAAGATTCACAAGTTTGCTAGCGGGATTGGTTTGGACTCGAATGCTTCCATACAGACAGCGCTGGTAGCAATGTATGCTAAATGTGGGAGCCTTTCTGATGCTCGTCAGTGTTTTGGTAGGATTCGTGGAAGTGAGAAGAATTTGGTTGTATGGAATACTCTGATCACTGCTTATGCGTCCCATGCACACGGATCAGAAGCTGTGTCCACTTTTGAGGACATGGTGAAAGCCGGTGTTCAACCTGATCACATAACATTCACGGGATTGTTATCTGGATGCAGTCATTCAGGGCTTGTTGATCTTGGCTTAAAATACTTTGATGGCATGAAGACAGTGTACTCTGTTGAACCAAGAGTCGAGCATTATGCTTGTGTTGTTGATCTATTGGGTCGTGCAGGGCGATTGATGGAAGCAATGGATGTCGAGTTACCGAAAAGGATGAAGGCAGCTGGTTATGTACCTGACACTAGGTTTGCTTTGCATGATGTTAGTGAAGAGGAGAAAGAACATAACCTTACAACCCACAGTGAAAAGCTTGCCATTGCCTTTGGACTTCTTAATACTGATCCTGGAGCAGTTCTTCGTGTGACAAAGAACCTTAGAATTTGTGGAGATTGTCATACAGCCACCAAGTTCATATCTAGAATCTATGGGAGGGAGATTATCGTAAGAGACGTGAATCGATTCCATCACTTTAGAGATGGGCACTGTTCATGTGGAGATTACTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

515

Amino Acids

57.04

Weight (kDa)

7.81

Isoelectric Point (pI)

32.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 181 - 214 3.3e-06 PPR repeat family
PPR_2 PF13041 212 - 263 2.5e-10 PPR repeat family
PPR PF01535 215 - 243 1.9e-09 PPR repeat
PPR_2 PF13041 318 - 365 9.6e-14 PPR repeat family
DYW_deaminase PF14432 422 - 514 2.5e-45 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017363)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18340
malus_domestica MD07G1165900.v1.1
prunus_persica Prupe.2G205400_v2.0.a1
pyrus_communis pycom07g16150
rosa_chinensis RchiOBHm_Chr1g0362051
rosa_laevigata RLG00000002139 RLG00000027677
rosa_multiflora Rmu_sc0010614.1_g000005 Rmu_sc0020775.1_g000001
rosa_roxburghii Rroxscaffold_4G00294570
rosa_rugosa Rorug01G0293100
rosa_samantha Rh1BG266600
rosa_wichuraiana Rw1G027010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 675
AccB1I GGYRCC 1 cut(s) 161
AccBSI CCGCTC 1 cut(s) 805
AciI CCGC 3 cut(s) 572, 805, 834
AclWI GGATC 2 cut(s) 1012, 1373
AcsI RAATTY 3 cut(s) 309, 952, 1416
AcyI GRCGYC 1 cut(s) 162
AfaI GTAC 6 cut(s) 7, 182, 254, 578, 1151, 1272
AfeI AGCGCT 1 cut(s) 873
AfiI CCNNNNNNNGG 1 cut(s) 81
AflIII ACRYGT 1 cut(s) 480
AgsI TTSAA 4 cut(s) 97, 724, 1052, 1160
AhdI GACNNNNNGTC 1 cut(s) 550
AjiI CACGTC 1 cut(s) 1489
AjnI CCWGG 1 cut(s) 1381
AluBI AGCT 8 cut(s) 100, 189, 209, 429, 520, 1013, 1262, 1348
AluI AGCT 8 cut(s) 100, 189, 209, 429, 520, 1013, 1262, 1348
Alw21I GWGCWC 3 cut(s) 372, 514, 787
Alw26I GTCTC 2 cut(s) 537, 1479
Alw44I GTGCAC 2 cut(s) 510, 783
AlwI GGATC 2 cut(s) 1012, 1373
AlwNI CAGNNNCTG 1 cut(s) 1013
Aor51HI AGCGCT 1 cut(s) 873
AoxI GGCC 2 cut(s) 103, 334
ApaLI GTGCAC 2 cut(s) 510, 783
ApeKI GCWGC 2 cut(s) 794, 1259
ApoI RAATTY 3 cut(s) 309, 952, 1416
ArsI GACNNNNNNTTYG 2 cut(s) 1268, 1300
Asp700I GAANNNNTTC 1 cut(s) 1496
AspLEI GCGC 4 cut(s) 164, 676, 799, 874
AspS9I GGNCC 2 cut(s) 112, 127
AsuHPI GGTGA 5 cut(s) 206, 356, 602, 766, 1048
AsuNHI GCTAGC 1 cut(s) 830
AvaII GGWCC 2 cut(s) 112, 127
BaeGI GKGCMC 3 cut(s) 514, 787, 1521
BanI GGYRCC 1 cut(s) 161
BarI GAAGNNNNNNTAC 2 cut(s) 1133, 1165
BbsI GAAGAC 1 cut(s) 1148
Bbv12I GWGCWC 3 cut(s) 372, 514, 787
BbvCI CCTCAGC 1 cut(s) 606
BbvI GCAGC 2 cut(s) 781, 1271
BccI CCATC 6 cut(s) 247, 496, 1127, 1213, 1508, 1509
BcgI CGANNNNNNTGC 6 cut(s) 131, 165, 372, 406, 1160, 1194
BciT130I CCWGG 1 cut(s) 1383
BclI TGATCA 3 cut(s) 346, 975, 1057
BcoDI GTCTC 2 cut(s) 537, 1479
BfaI CTAG 6 cut(s) 26, 101, 800, 831, 1281, 1455
BfoI RGCGCY 2 cut(s) 165, 875
BisI GCNGC 2 cut(s) 795, 1260
BlpI GCTNAGC 2 cut(s) 425, 690
BlsI GCNGC 2 cut(s) 796, 1261
Bme1390I CCNGG 1 cut(s) 1383
Bme18I GGWCC 2 cut(s) 112, 127
BmeRI GACNNNNNGTC 1 cut(s) 550
BmgBI CACGTC 1 cut(s) 1489
BmgT120I GGNCC 2 cut(s) 112, 127
BmiI GGNNCC 2 cut(s) 163, 902
BmrFI CCNGG 1 cut(s) 1383
BmrI ACTGGG 2 cut(s) 90, 447
BmsI GCATC 4 cut(s) 54, 312, 901, 1079
BmtI GCTAGC 1 cut(s) 834
BmuI ACTGGG 2 cut(s) 90, 447
BpiI GAAGAC 1 cut(s) 1148
BpmI CTGGAG 1 cut(s) 1404
Bpu10I CCTNAGC 1 cut(s) 606
Bpu1102I GCTNAGC 2 cut(s) 425, 690
BpuEI CTTGAG 2 cut(s) 356, 451
Bsa29I ATCGAT 1 cut(s) 1495
BsaAI YACGTR 1 cut(s) 515
BsaBI GATNNNNATC 1 cut(s) 1081
BsaHI GRCGYC 1 cut(s) 162
BsaXI ACNNNNNCTCC 2 cut(s) 499, 529
Bsc4I CCNNNNNNNGG 1 cut(s) 81
Bse118I RCCGGY 1 cut(s) 1043
Bse1I ACTGG 3 cut(s) 85, 442, 1544
Bse3DI GCAATG 4 cut(s) 183, 888, 1233, 1353
Bse8I GATNNNNATC 1 cut(s) 1081
BseBI CCWGG 1 cut(s) 1383
BseCI ATCGAT 1 cut(s) 1495
BseGI GGATG 3 cut(s) 1094, 1237, 1257
BseJI GATNNNNATC 1 cut(s) 1081
BseLI CCNNNNNNNGG 1 cut(s) 81
BseMI GCAATG 4 cut(s) 183, 888, 1233, 1353
BseMII CTCAG 4 cut(s) 219, 416, 597, 681
BseNI ACTGG 3 cut(s) 85, 442, 1544
BseRI GAGGAG 2 cut(s) 623, 1325
BseSI GKGCMC 3 cut(s) 514, 787, 1521
BseXI GCAGC 2 cut(s) 781, 1271
BsgI GTGCAG 2 cut(s) 402, 1227
BshFI GGCC 2 cut(s) 105, 336
BshNI GGYRCC 1 cut(s) 161
BshVI ATCGAT 1 cut(s) 1495
BsiHKAI GWGCWC 3 cut(s) 372, 514, 787
BsiSI CCGG 1 cut(s) 1044
BslFI GGGAC 2 cut(s) 478, 976
BslI CCNNNNNNNGG 1 cut(s) 81
BsmAI GTCTC 2 cut(s) 537, 1479
BsmBI CGTCTC 2 cut(s) 537, 1479
BsmFI GGGAC 2 cut(s) 478, 976
BsmI GAATGC 2 cut(s) 565, 859
BsnI GGCC 2 cut(s) 105, 336
Bsp1286I GDGCHC 4 cut(s) 372, 514, 787, 1521
Bsp1407I TGTACA 1 cut(s) 252
Bsp143I GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
Bsp1720I GCTNAGC 2 cut(s) 425, 690
BspACI CCGC 3 cut(s) 572, 805, 834
BspANI GGCC 2 cut(s) 105, 336
BspCNI CTCAG 4 cut(s) 218, 417, 598, 682
BspDI ATCGAT 1 cut(s) 1495
BspLI GGNNCC 2 cut(s) 163, 902
BspOI GCTAGC 1 cut(s) 834
BspPI GGATC 2 cut(s) 1012, 1373
BspT107I GGYRCC 1 cut(s) 161
BsrBI CCGCTC 1 cut(s) 805
BsrDI GCAATG 4 cut(s) 183, 888, 1233, 1353
BsrFI RCCGGY 1 cut(s) 1043
BsrGI TGTACA 1 cut(s) 252
BsrI ACTGG 3 cut(s) 85, 442, 1544
BssAI RCCGGY 1 cut(s) 1043
BssMI GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
BssNI GRCGYC 1 cut(s) 162
Bst2UI CCWGG 1 cut(s) 1383
Bst4CI ACNGT 4 cut(s) 760, 1147, 1340, 1523
Bst6I CTCTTC 1 cut(s) 1302
BstACI GRCGYC 1 cut(s) 162
BstAPI GCANNNNNTGC 2 cut(s) 569, 887
BstAUI TGTACA 1 cut(s) 252
BstBAI YACGTR 1 cut(s) 515
BstC8I GCNNGC 5 cut(s) 187, 687, 696, 832, 1350
BstDEI CTNAG 6 cut(s) 49, 205, 425, 606, 690, 1412
BstF5I GGATG 3 cut(s) 1094, 1237, 1257
BstH2I RGCGCY 2 cut(s) 165, 875
BstHHI GCGC 4 cut(s) 164, 676, 799, 874
BstKTI GATC 8 cut(s) 199, 349, 978, 1007, 1060, 1114, 1195, 1381
BstMAI GTCTC 2 cut(s) 537, 1479
BstMBI GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
BstMWI GCNNNNNNNGC 9 cut(s) 182, 569, 682, 691, 695, 791, 878, 887, 995
BstNI CCWGG 1 cut(s) 1383
BstNSI RCATGY 2 cut(s) 484, 783
BstSCI CCNGG 1 cut(s) 1381
BstSLI GKGCMC 3 cut(s) 514, 787, 1521
BstV1I GCAGC 2 cut(s) 781, 1271
BstV2I GAAGAC 1 cut(s) 1148
Bsu15I ATCGAT 1 cut(s) 1495
BsuRI GGCC 2 cut(s) 105, 336
BsuTUI ATCGAT 1 cut(s) 1495
BtrI CACGTC 1 cut(s) 1489
BtsCI GGATG 3 cut(s) 1094, 1237, 1257
BtsI GCAGTG 1 cut(s) 978
BtsIMutI CAGTG 5 cut(s) 926, 978, 1152, 1345, 1519
Cac8I GCNNGC 5 cut(s) 187, 687, 696, 832, 1350
CaiI CAGNNNCTG 1 cut(s) 1013
CfoI GCGC 4 cut(s) 164, 676, 799, 874
Cfr10I RCCGGY 1 cut(s) 1043
Cfr13I GGNCC 2 cut(s) 112, 127
ClaI ATCGAT 1 cut(s) 1495
CseI GACGC 1 cut(s) 978
Csp6I GTAC 6 cut(s) 6, 181, 253, 577, 1150, 1271
CviQI GTAC 6 cut(s) 6, 181, 253, 577, 1150, 1271
DdeI CTNAG 6 cut(s) 49, 205, 425, 606, 690, 1412
DinI GGCGCC 1 cut(s) 163
DpnI GATC 8 cut(s) 198, 348, 977, 1006, 1059, 1113, 1194, 1380
DpnII GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
DriI GACNNNNNGTC 1 cut(s) 550
Eam1104I CTCTTC 1 cut(s) 1302
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 1 cut(s) 1302
Eco147I AGGCCT 1 cut(s) 336
Eco32I GATATC 1 cut(s) 663
Eco47I GGWCC 2 cut(s) 112, 127
Eco47III AGCGCT 1 cut(s) 873
EcoRII CCWGG 1 cut(s) 1381
EcoRV GATATC 1 cut(s) 663
EcoT22I ATGCAT 2 cut(s) 327, 565
EgeI GGCGCC 1 cut(s) 163
EheI GGCGCC 1 cut(s) 163
Esp3I CGTCTC 2 cut(s) 537, 1479
FaqI GGGAC 2 cut(s) 478, 976
FauI CCCGC 3 cut(s) 565, 798, 827
FauNDI CATATG 1 cut(s) 123
FbaI TGATCA 3 cut(s) 346, 975, 1057
Fnu4HI GCNGC 2 cut(s) 795, 1260
FokI GGATG 3 cut(s) 1101, 1244, 1264
Fsp4HI GCNGC 2 cut(s) 795, 1260
FspBI CTAG 6 cut(s) 26, 101, 800, 831, 1281, 1455
FspI TGCGCA 1 cut(s) 675
GlaI GCGC 4 cut(s) 163, 675, 798, 873
GluI GCNGC 2 cut(s) 795, 1260
GsuI CTGGAG 1 cut(s) 1404
HaeII RGCGCY 2 cut(s) 165, 875
HaeIII GGCC 2 cut(s) 105, 336
HapII CCGG 1 cut(s) 1044
HgaI GACGC 1 cut(s) 978
HhaI GCGC 4 cut(s) 164, 676, 799, 874
Hin1I GRCGYC 1 cut(s) 162
Hin6I GCGC 4 cut(s) 162, 674, 797, 872
HinP1I GCGC 4 cut(s) 162, 674, 797, 872
HindIII AAGCTT 1 cut(s) 1346
HpaII CCGG 1 cut(s) 1044
HphI GGTGA 5 cut(s) 206, 356, 602, 766, 1048
Hpy166II GTNNAC 5 cut(s) 115, 512, 785, 1020, 1150
Hpy188I TCNGA 6 cut(s) 321, 451, 736, 910, 975, 1009
Hpy188III TCNNGA 2 cut(s) 1086, 1455
Hpy8I GTNNAC 5 cut(s) 115, 512, 785, 1020, 1150
HpyAV CCTTC 2 cut(s) 290, 1249
HpyCH4III ACNGT 4 cut(s) 760, 1147, 1340, 1523
HpyCH4IV ACGT 3 cut(s) 514, 546, 1488
HpyF10VI GCNNNNNNNGC 9 cut(s) 182, 569, 682, 691, 695, 791, 878, 887, 995
HpyF3I CTNAG 6 cut(s) 49, 205, 425, 606, 690, 1412
HpySE526I ACGT 3 cut(s) 514, 546, 1488
Hsp92I GRCGYC 1 cut(s) 162
HspAI GCGC 4 cut(s) 162, 674, 797, 872
KasI GGCGCC 1 cut(s) 161
Ksp22I TGATCA 3 cut(s) 346, 975, 1057
Kzo9I GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
LmnI GCTCC 2 cut(s) 900, 1385
Lsp1109I GCAGC 2 cut(s) 781, 1271
LweI GCATC 4 cut(s) 54, 312, 901, 1079
MaeI CTAG 6 cut(s) 26, 101, 800, 831, 1281, 1455
MaeII ACGT 3 cut(s) 514, 546, 1488
MaeIII GTNAC 4 cut(s) 287, 754, 1239, 1399
MalI GATC 8 cut(s) 198, 348, 977, 1006, 1059, 1113, 1194, 1380
MbiI CCGCTC 1 cut(s) 805
MboI GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
MboII GAAGA 7 cut(s) 736, 764, 826, 961, 1153, 1319, 1385
MhlI GDGCHC 4 cut(s) 372, 514, 787, 1521
MluCI AATT 6 cut(s) 63, 256, 309, 748, 952, 1416
Mly113I GGCGCC 1 cut(s) 162
MlyI GAGTC 4 cut(s) 132, 455, 842, 1176
MmeI TCCRAC 1 cut(s) 423
MnlI CCTC 9 cut(s) 128, 580, 601, 621, 730, 804, 1021, 1303, 1461
Mph1103I ATGCAT 2 cut(s) 327, 565
MroXI GAANNNNTTC 1 cut(s) 1496
MseI TTAA 5 cut(s) 14, 77, 741, 1121, 1371
MslI CAYNNNNRTG 2 cut(s) 122, 485
MspA1I CMGCKG 2 cut(s) 209, 1262
MspI CCGG 1 cut(s) 1044
MspR9I CCNGG 1 cut(s) 1383
Mva1269I GAATGC 2 cut(s) 565, 859
MvaI CCWGG 1 cut(s) 1383
MwoI GCNNNNNNNGC 9 cut(s) 182, 569, 682, 691, 695, 791, 878, 887, 995
NarI GGCGCC 1 cut(s) 162
NdeI CATATG 1 cut(s) 123
NdeII GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
NheI GCTAGC 1 cut(s) 830
NlaIV GGNNCC 2 cut(s) 163, 902
NmuCI GTSAC 2 cut(s) 754, 1399
NsbI TGCGCA 1 cut(s) 675
NsiI ATGCAT 2 cut(s) 327, 565
NspI RCATGY 2 cut(s) 484, 783
PceI AGGCCT 1 cut(s) 336
PciI ACATGT 1 cut(s) 480
PcsI WCGNNNNNNNCGW 2 cut(s) 1210, 1485
PctI GAATGC 2 cut(s) 565, 859
PdmI GAANNNNTTC 1 cut(s) 1496
PfeI GAWTC 6 cut(s) 731, 817, 934, 1458, 1492, 1497
PfoI TCCNGGA 1 cut(s) 1381
PkrI GCNGC 2 cut(s) 796, 1261
PleI GAGTC 4 cut(s) 132, 454, 842, 1175
PluTI GGCGCC 1 cut(s) 165
PpsI GAGTC 4 cut(s) 132, 454, 842, 1175
Ppu21I YACGTR 1 cut(s) 515
PscI ACATGT 1 cut(s) 480
Psp6I CCWGG 1 cut(s) 1381
PspGI CCWGG 1 cut(s) 1381
PspN4I GGNNCC 2 cut(s) 163, 902
PspPI GGNCC 2 cut(s) 112, 127
PsrI GAACNNNNNNTAC 2 cut(s) 753, 785
PstNI CAGNNNCTG 1 cut(s) 1013
PvuII CAGCTG 2 cut(s) 209, 1262
RsaI GTAC 6 cut(s) 7, 182, 254, 578, 1151, 1272
RsaNI GTAC 6 cut(s) 6, 181, 253, 577, 1150, 1271
RseI CAYNNNNRTG 2 cut(s) 122, 485
SaqAI TTAA 5 cut(s) 14, 77, 741, 1121, 1371
SatI GCNGC 2 cut(s) 795, 1260
Sau3AI GATC 8 cut(s) 196, 346, 975, 1004, 1057, 1111, 1192, 1378
Sau96I GGNCC 2 cut(s) 112, 127
SchI GAGTC 4 cut(s) 132, 455, 842, 1176
ScrFI CCNGG 1 cut(s) 1383
SduI GDGCHC 4 cut(s) 372, 514, 787, 1521
SfaNI GCATC 4 cut(s) 54, 312, 901, 1079
SfoI GGCGCC 1 cut(s) 163
SinI GGWCC 2 cut(s) 112, 127
SmiMI CAYNNNNRTG 2 cut(s) 122, 485
SmlI CTYRAG 2 cut(s) 371, 430
SmoI CTYRAG 2 cut(s) 371, 430
Sse9I AATT 6 cut(s) 63, 256, 309, 748, 952, 1416
SseBI AGGCCT 1 cut(s) 336
SsiI CCGC 3 cut(s) 572, 805, 834
SspDI GGCGCC 1 cut(s) 161
SspI AATATT 2 cut(s) 397, 640
SspMI CTAG 6 cut(s) 26, 101, 800, 831, 1281, 1455
StuI AGGCCT 1 cut(s) 336
StyD4I CCNGG 1 cut(s) 1381
TaaI ACNGT 4 cut(s) 760, 1147, 1340, 1523
TaiI ACGT 3 cut(s) 517, 549, 1491
TaqI TCGA 8 cut(s) 141, 260, 392, 525, 851, 1170, 1236, 1495
TasI AATT 6 cut(s) 63, 256, 309, 748, 952, 1416
TatI WGTACW 2 cut(s) 252, 1149
TfiI GAWTC 6 cut(s) 731, 817, 934, 1458, 1492, 1497
Tru1I TTAA 5 cut(s) 14, 77, 741, 1121, 1371
Tru9I TTAA 5 cut(s) 14, 77, 741, 1121, 1371
TscAI CASTG 5 cut(s) 926, 985, 1152, 1345, 1526
TseFI GTSAC 2 cut(s) 754, 1399
TseI GCWGC 2 cut(s) 794, 1259
Tsp45I GTSAC 2 cut(s) 754, 1399
TspDTI ATGAA 7 cut(s) 272, 407, 543, 1154, 1268, 1438, 1515
TspGWI ACGGA 1 cut(s) 1017
TspRI CASTG 5 cut(s) 926, 985, 1152, 1345, 1526
VneI GTGCAC 2 cut(s) 510, 783
VpaK11BI GGWCC 2 cut(s) 112, 127
XapI RAATTY 3 cut(s) 309, 952, 1416
XbaI TCTAGA 1 cut(s) 1454
XceI RCATGY 2 cut(s) 484, 783
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmnI GAANNNNTTC 1 cut(s) 1496
XspI CTAG 6 cut(s) 26, 101, 800, 831, 1281, 1455
Zsp2I ATGCAT 2 cut(s) 327, 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.