MD07G1165900.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0017363
Physical Location & Seq
Forward (+)
24041937 .. 24043712
1776 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1165900.v1.1.491

Sequence Viewer

Length: 1755 bp
ATGCGCACCCTCCTAAAACCACTTCTGGCACAAGATCCACGCTTCGTTTCATTCTATGCACCAATTTTTCAGTCCTTGACTGGCAAGAACTTGCTGAAACTAGGCCAACAAGTCCACGCCCAGATGGCCCTACGCGGGTTCGAACCCGATGCATATCTCGGCGCCAAGATGGTCGCAATGTATGCAAGCTCAGATGATCTCGACTCAGCTGTCGCTATCTTCCACAGAGTAAACAACCCATCAACGCTTCTGTATAATTCGATCATTCGGGCGTATACGCTACATGGGTTCTCTGAGGAAACCATGGAAATCTATGGCAGAATGCATTGTTTAGGGCTTAAAGCAGACAACTTTACGTACCCTTTTGTTCTCAAGTGTTGTGCGGAACTGTCGAGGATTTGGATTGGAAAATGTGTTCATGGGTTGAGTTTGAAAGTTGGGTTGGAATCTGATATGTATGTTGGGACTTCTTTGATCAACATGTATGTGAAATGCTGTGATATGAGCGATGCACGTAGGCTGTTCGATAAAATGACTGTGAGAGATGTTTCATCTTGGAATGCGTTGATTGCCGGGTACATGAAAGATGGGGAGATTTGTCTTGCTGAGGATTTGTTTGGGAAAATGCCGGGCAGAAATATTGTTTCTTGGACGGCTATGATATCGGGGTACACTCAAAATGGGCTTGCGGAGCAAGCATTGTTTTTGTTTGATGAGATGTTGAAGAAAGATTCTAAGGTTAAGCCGAACTGGGTGACGATAATGAGTGTTCTTCCTGCATGTGCACATTCAGCTGCCCTCGAGCGAGGGAGAAAAATTCACAACTTTGCGAGCAGGATTGGTTTAGAGTCTAATGTTTCCATACAGACAGCACTCCTCGCAATGTATGCTAAATGTGGGAGCCTCTTGGATGCTCGTCAGTGTTTCGAAAGAGTACGTGGAACTCAAAATAATTTAGTTGCATGGAATACAATGATAACAGCTTATGCCTCACATGGACGCGGATCAGAAGCTGTTTCCACCTTTGAGGACATGATTGTGGCCGGGGTTCAACCTGATAACATTACATTCACAGGGTTGTTATCAGGATGCAGCCATTCAGGGCTCGTCGATGTTGGCCTAAAATACTTCGATTACATGAAAAGAGTATACTCTGTCGAACCAGGGGTTGAACATTATGCTTGTGTTGTTGATCTTCTGGGTCGTGCAGGGCGCTTGGCAGAAGCTAAAGATCTTATAAGTAAAATGCCAATGCAAGCAGGGCCAAGCATTTGGGGTGCAATGTTATCGGCTTGTCGGAAACACCATAACTTGGAAATTGCCGAAATTGCAGCAAGAAGTCTATTCATCTTAGAACCAGAAAATAGTGGCAATTATGTCATGCTGTCAAACATATATGCTGAAGCCGGCATGTGGAAGGAAGTGGACAATTTGAGAGTTCTTTTGAAAGCTCAAGGCGTGAAGAAGAACCCTGGATGCAGTTGGACAGAGGTCAATGGGAAAGCTCACTTGTTTCTTGGTGGAGATACATCTCACCCTCAAGCAAAAGAAATTTACGAGTTCTTGCTGGACGAGTTACCGAAGAAAATTAAGGCAGCCGGTTATGTACCTGACACTAGCTTTGTTTTGCATGATGTTAGTGAAGAGGAGAAAGAACATAGCCTGACAACCCACAGTGAAAAGCTTGCCATTGCCTTTGGACTTCTTAATACTAGTCCTGGACTAGTTCTTCGAGTGACCAAGAACCTTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

585

Amino Acids

64.66

Weight (kDa)

7.24

Isoelectric Point (pI)

37.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 212 - 262 2.1e-09 PPR repeat family
PPR PF01535 215 - 243 3.7e-08 PPR repeat
PPR_2 PF13041 318 - 365 8.9e-14 PPR repeat family
PPR PF01535 320 - 350 2.1e-07 PPR repeat
E_motif PF20431 435 - 497 1.1e-24 E motif
DYW_deaminase PF14432 534 - 583 2.5e-15 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017363)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18340
malus_domestica MD07G1165900.v1.1
prunus_persica Prupe.2G205400_v2.0.a1
pyrus_communis pycom07g16150
rosa_chinensis RchiOBHm_Chr1g0362051
rosa_laevigata RLG00000002139 RLG00000027677
rosa_multiflora Rmu_sc0010614.1_g000005 Rmu_sc0020775.1_g000001
rosa_roxburghii Rroxscaffold_4G00294570
rosa_rugosa Rorug01G0293100
rosa_samantha Rh1BG266600
rosa_wichuraiana Rw1G027010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1238
AasI GACNNNNNNGTC 1 cut(s) 209
Acc16I TGCGCA 1 cut(s) 5
AccB1I GGYRCC 1 cut(s) 161
AccB7I CCANNNNNTGG 1 cut(s) 1312
AccI GTMKAC 2 cut(s) 275, 1149
AccII CGCG 2 cut(s) 135, 1002
AciI CCGC 4 cut(s) 135, 383, 689, 1002
AclWI GGATC 2 cut(s) 29, 1012
AcoI YGGCCR 1 cut(s) 1041
AcsI RAATTY 2 cut(s) 816, 1551
AcuI CTGAAG 1 cut(s) 1422
AcyI GRCGYC 1 cut(s) 162
AfaI GTAC 5 cut(s) 359, 578, 671, 936, 1608
AfiI CCNNNNNNNGG 3 cut(s) 135, 1312, 1413
AflIII ACRYGT 1 cut(s) 480
AgsI TTSAA 5 cut(s) 433, 724, 1052, 1172, 1447
AhlI ACTAGT 2 cut(s) 1712, 1723
AjnI CCWGG 3 cut(s) 1162, 1471, 1717
AjuI GAANNNNNNNTTGG 2 cut(s) 425, 457
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
Alw21I GWGCWC 1 cut(s) 787
Alw44I GTGCAC 1 cut(s) 783
AlwI GGATC 2 cut(s) 29, 1012
AlwNI CAGNNNCTG 1 cut(s) 1013
Ama87I CYCGRG 1 cut(s) 800
AoxI GGCC 5 cut(s) 103, 126, 1041, 1117, 1262
ApaLI GTGCAC 1 cut(s) 783
ApeKI GCWGC 4 cut(s) 794, 1092, 1331, 1595
ApoI RAATTY 2 cut(s) 816, 1551
ArsI GACNNNNNNTTYG 4 cut(s) 1604, 1636, 1713, 1745
AspLEI GCGC 3 cut(s) 6, 164, 1215
AspS9I GGNCC 2 cut(s) 127, 1262
AsuC2I CCSGG 3 cut(s) 574, 630, 1045
AsuHPI GGTGA 2 cut(s) 766, 1526
AsuII TTCGAA 2 cut(s) 141, 927
AvaI CYCGRG 1 cut(s) 800
BaeGI GKGCMC 1 cut(s) 787
BanI GGYRCC 1 cut(s) 161
BanII GRGCYC 1 cut(s) 1107
Bbv12I GWGCWC 1 cut(s) 787
BbvCI CCTCAGC 1 cut(s) 606
BbvI GCAGC 4 cut(s) 781, 1104, 1343, 1607
BccI CCATC 4 cut(s) 118, 163, 247, 581
BceAI ACGGC 1 cut(s) 669
BcgI CGANNNNNNTGC 4 cut(s) 131, 165, 1269, 1303
BciT130I CCWGG 3 cut(s) 1164, 1473, 1719
BclI TGATCA 1 cut(s) 474
BcnI CCSGG 3 cut(s) 574, 630, 1045
BcuI ACTAGT 2 cut(s) 1712, 1723
BfaI CTAG 4 cut(s) 101, 1617, 1713, 1724
BfoI RGCGCY 2 cut(s) 165, 1216
BglI GCCNNNNNGGC 1 cut(s) 125
BglII AGATCT 1 cut(s) 1231
BisI GCNGC 4 cut(s) 795, 1093, 1332, 1596
BlsI GCNGC 4 cut(s) 796, 1094, 1333, 1597
Bme1390I CCNGG 6 cut(s) 574, 630, 1045, 1164, 1473, 1719
BmeT110I CYCGRG 1 cut(s) 800
BmgT120I GGNCC 2 cut(s) 127, 1262
BmiI GGNNCC 2 cut(s) 163, 902
BmrFI CCNGG 6 cut(s) 574, 630, 1045, 1164, 1473, 1719
BmrI ACTGGG 1 cut(s) 760
BmsI GCATC 5 cut(s) 139, 499, 901, 1079, 1466
BmuI ACTGGG 1 cut(s) 760
BoxI GACNNNNGTC 1 cut(s) 1490
Bpu10I CCTNAGC 1 cut(s) 606
Bpu14I TTCGAA 2 cut(s) 141, 927
BpuEI CTTGAG 3 cut(s) 356, 1437, 1524
BpuMI CCSGG 3 cut(s) 574, 630, 1045
BsaAI YACGTR 3 cut(s) 357, 515, 938
BsaBI GATNNNNATC 1 cut(s) 153
BsaHI GRCGYC 1 cut(s) 162
BsaJI CCNNGG 4 cut(s) 303, 1044, 1163, 1471
Bsc4I CCNNNNNNNGG 3 cut(s) 135, 1312, 1413
Bse118I RCCGGY 2 cut(s) 1406, 1598
Bse1I ACTGG 2 cut(s) 85, 755
Bse3DI GCAATG 4 cut(s) 183, 888, 1287, 1689
Bse8I GATNNNNATC 1 cut(s) 153
BseBI CCWGG 3 cut(s) 1164, 1473, 1719
BseDI CCNNGG 4 cut(s) 303, 1044, 1163, 1471
BseGI GGATG 3 cut(s) 916, 1094, 1481
BseJI GATNNNNATC 1 cut(s) 153
BseLI CCNNNNNNNGG 3 cut(s) 135, 1312, 1413
BseMI GCAATG 4 cut(s) 183, 888, 1287, 1689
BseMII CTCAG 4 cut(s) 204, 219, 285, 597
BseNI ACTGG 2 cut(s) 85, 755
BseRI GAGGAG 2 cut(s) 866, 1661
BseSI GKGCMC 1 cut(s) 787
BseXI GCAGC 4 cut(s) 781, 1104, 1343, 1607
BsgI GTGCAG 1 cut(s) 1227
Bsh1236I CGCG 2 cut(s) 135, 1002
BshFI GGCC 5 cut(s) 105, 128, 1043, 1119, 1264
BshNI GGYRCC 1 cut(s) 161
BsiHKAI GWGCWC 1 cut(s) 787
BsiHKCI CYCGRG 1 cut(s) 800
BsiSI CCGG 5 cut(s) 573, 629, 1044, 1407, 1599
BslFI GGGAC 1 cut(s) 478
BslI CCNNNNNNNGG 3 cut(s) 135, 1312, 1413
BsmFI GGGAC 1 cut(s) 478
BsmI GAATGC 2 cut(s) 327, 565
BsnI GGCC 5 cut(s) 105, 128, 1043, 1119, 1264
BsoBI CYCGRG 1 cut(s) 800
Bsp119I TTCGAA 2 cut(s) 141, 927
Bsp1286I GDGCHC 2 cut(s) 787, 1107
Bsp143I GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
Bsp19I CCATGG 1 cut(s) 303
BspACI CCGC 4 cut(s) 135, 383, 689, 1002
BspANI GGCC 5 cut(s) 105, 128, 1043, 1119, 1264
BspCNI CTCAG 4 cut(s) 203, 218, 286, 598
BspFNI CGCG 2 cut(s) 135, 1002
BspLI GGNNCC 2 cut(s) 163, 902
BspPI GGATC 2 cut(s) 29, 1012
BspT104I TTCGAA 2 cut(s) 141, 927
BspT107I GGYRCC 1 cut(s) 161
BsrDI GCAATG 4 cut(s) 183, 888, 1287, 1689
BsrFI RCCGGY 2 cut(s) 1406, 1598
BsrI ACTGG 2 cut(s) 85, 755
BssAI RCCGGY 2 cut(s) 1406, 1598
BssECI CCNNGG 4 cut(s) 303, 1044, 1163, 1471
BssMI GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
BssNAI GTATAC 2 cut(s) 276, 1150
BssNI GRCGYC 1 cut(s) 162
BssT1I CCWWGG 1 cut(s) 303
Bst1107I GTATAC 2 cut(s) 276, 1150
Bst2UI CCWGG 3 cut(s) 1164, 1473, 1719
Bst4CI ACNGT 3 cut(s) 390, 538, 1676
Bst6I CTCTTC 1 cut(s) 1638
BstACI GRCGYC 1 cut(s) 162
BstAPI GCANNNNNTGC 2 cut(s) 182, 887
BstBAI YACGTR 3 cut(s) 357, 515, 938
BstBI TTCGAA 2 cut(s) 141, 927
BstC8I GCNNGC 7 cut(s) 187, 687, 696, 832, 1257, 1408, 1686
BstDEI CTNAG 6 cut(s) 190, 205, 294, 606, 735, 1351
BstDSI CCRYGG 1 cut(s) 303
BstF5I GGATG 3 cut(s) 916, 1094, 1481
BstFNI CGCG 2 cut(s) 135, 1002
BstH2I RGCGCY 2 cut(s) 165, 1216
BstHHI GCGC 3 cut(s) 6, 164, 1215
BstKTI GATC 7 cut(s) 37, 199, 264, 477, 1007, 1195, 1234
BstMBI GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
BstNI CCWGG 3 cut(s) 1164, 1473, 1719
BstNSI RCATGY 3 cut(s) 484, 783, 1414
BstPAI GACNNNNGTC 1 cut(s) 1490
BstSCI CCNGG 6 cut(s) 572, 628, 1043, 1162, 1471, 1717
BstSLI GKGCMC 1 cut(s) 787
BstSNI TACGTA 1 cut(s) 357
BstUI CGCG 2 cut(s) 135, 1002
BstV1I GCAGC 4 cut(s) 781, 1104, 1343, 1607
BstX2I RGATCY 2 cut(s) 34, 1231
BstXI CCANNNNNNTGG 1 cut(s) 1272
BstYI RGATCY 2 cut(s) 34, 1231
BstZ17I GTATAC 2 cut(s) 276, 1150
BsuRI GGCC 5 cut(s) 105, 128, 1043, 1119, 1264
BtgI CCRYGG 1 cut(s) 303
BtgZI GCGATG 1 cut(s) 522
BtsCI GGATG 3 cut(s) 916, 1094, 1481
BtsIMutI CAGTG 2 cut(s) 926, 1681
Cac8I GCNNGC 7 cut(s) 187, 687, 696, 832, 1257, 1408, 1686
CaiI CAGNNNCTG 1 cut(s) 1013
CfoI GCGC 3 cut(s) 6, 164, 1215
Cfr10I RCCGGY 2 cut(s) 1406, 1598
Cfr13I GGNCC 2 cut(s) 127, 1262
CseI GACGC 1 cut(s) 1008
Csp6I GTAC 5 cut(s) 358, 577, 670, 935, 1607
CviQI GTAC 5 cut(s) 358, 577, 670, 935, 1607
DdeI CTNAG 6 cut(s) 190, 205, 294, 606, 735, 1351
DinI GGCGCC 1 cut(s) 163
DpnI GATC 7 cut(s) 36, 198, 263, 476, 1006, 1194, 1233
DpnII GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 1 cut(s) 1041
Eam1104I CTCTTC 1 cut(s) 1638
EarI CTCTTC 1 cut(s) 1638
Eco105I TACGTA 1 cut(s) 357
Eco130I CCWWGG 1 cut(s) 303
Eco24I GRGCYC 1 cut(s) 1107
Eco32I GATATC 1 cut(s) 663
Eco57I CTGAAG 1 cut(s) 1422
Eco88I CYCGRG 1 cut(s) 800
EcoRII CCWGG 3 cut(s) 1162, 1471, 1717
EcoRV GATATC 1 cut(s) 663
EcoT14I CCWWGG 1 cut(s) 303
EcoT22I ATGCAT 2 cut(s) 154, 327
EcoT38I GRGCYC 1 cut(s) 1107
EgeI GGCGCC 1 cut(s) 163
EheI GGCGCC 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 303
FaqI GGGAC 1 cut(s) 478
FauI CCCGC 1 cut(s) 128
FbaI TGATCA 1 cut(s) 474
FblI GTMKAC 2 cut(s) 275, 1149
Fnu4HI GCNGC 4 cut(s) 795, 1093, 1332, 1596
FokI GGATG 3 cut(s) 923, 1101, 1488
FriOI GRGCYC 1 cut(s) 1107
Fsp4HI GCNGC 4 cut(s) 795, 1093, 1332, 1596
FspAI RTGCGCAY 1 cut(s) 5
FspBI CTAG 4 cut(s) 101, 1617, 1713, 1724
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 3 cut(s) 5, 163, 1214
GluI GCNGC 4 cut(s) 795, 1093, 1332, 1596
HaeII RGCGCY 2 cut(s) 165, 1216
HaeIII GGCC 5 cut(s) 105, 128, 1043, 1119, 1264
HapII CCGG 5 cut(s) 573, 629, 1044, 1407, 1599
HgaI GACGC 1 cut(s) 1008
HhaI GCGC 3 cut(s) 6, 164, 1215
Hin1I GRCGYC 1 cut(s) 162
Hin6I GCGC 3 cut(s) 4, 162, 1213
HinP1I GCGC 3 cut(s) 4, 162, 1213
HindIII AAGCTT 1 cut(s) 1682
HinfI GANTC 4 cut(s) 203, 446, 731, 848
HpaII CCGG 5 cut(s) 573, 629, 1044, 1407, 1599
HphI GGTGA 2 cut(s) 766, 1526
Hpy166II GTNNAC 7 cut(s) 115, 232, 276, 672, 785, 1150, 1426
Hpy188I TCNGA 5 cut(s) 193, 295, 451, 1009, 1299
Hpy188III TCNNGA 2 cut(s) 200, 1086
Hpy8I GTNNAC 7 cut(s) 115, 232, 276, 672, 785, 1150, 1426
Hpy99I CGWCG 1 cut(s) 1112
HpyAV CCTTC 1 cut(s) 1411
HpyCH4III ACNGT 3 cut(s) 390, 538, 1676
HpyCH4IV ACGT 3 cut(s) 356, 514, 937
HpyF3I CTNAG 6 cut(s) 190, 205, 294, 606, 735, 1351
HpySE526I ACGT 3 cut(s) 356, 514, 937
Hsp92I GRCGYC 1 cut(s) 162
HspAI GCGC 3 cut(s) 4, 162, 1213
KasI GGCGCC 1 cut(s) 161
KroI GCCGGC 1 cut(s) 1406
KroNI GCCGGC 1 cut(s) 1408
Ksp22I TGATCA 1 cut(s) 474
Kzo9I GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
LmnI GCTCC 2 cut(s) 691, 900
Lsp1109I GCAGC 4 cut(s) 781, 1104, 1343, 1607
LweI GCATC 5 cut(s) 139, 499, 901, 1079, 1466
MaeI CTAG 4 cut(s) 101, 1617, 1713, 1724
MaeII ACGT 3 cut(s) 356, 514, 937
MaeIII GTNAC 3 cut(s) 754, 1575, 1735
MalI GATC 7 cut(s) 36, 198, 263, 476, 1006, 1194, 1233
MboI GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
MboII GAAGA 9 cut(s) 211, 736, 764, 1187, 1474, 1477, 1594, 1655, 1721
MflI RGATCY 2 cut(s) 34, 1231
MhlI GDGCHC 2 cut(s) 787, 1107
Mly113I GGCGCC 1 cut(s) 162
MlyI GAGTC 2 cut(s) 197, 857
MmeI TCCRAC 3 cut(s) 423, 1277, 1463
Mph1103I ATGCAT 2 cut(s) 154, 327
MroNI GCCGGC 1 cut(s) 1406
MseI TTAA 4 cut(s) 339, 741, 1590, 1707
MslI CAYNNNNRTG 2 cut(s) 485, 1037
MspA1I CMGCKG 2 cut(s) 209, 794
MspI CCGG 5 cut(s) 573, 629, 1044, 1407, 1599
MspR9I CCNGG 6 cut(s) 574, 630, 1045, 1164, 1473, 1719
Mva1269I GAATGC 2 cut(s) 327, 565
MvaI CCWGG 3 cut(s) 1164, 1473, 1719
MvnI CGCG 2 cut(s) 135, 1002
NaeI GCCGGC 1 cut(s) 1408
NarI GGCGCC 1 cut(s) 162
NciI CCSGG 3 cut(s) 574, 630, 1045
NcoI CCATGG 1 cut(s) 303
NdeII GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
NgoMIV GCCGGC 1 cut(s) 1406
NlaIV GGNNCC 2 cut(s) 163, 902
NmeAIII GCCGAG 1 cut(s) 138
NmuCI GTSAC 2 cut(s) 754, 1735
NsbI TGCGCA 1 cut(s) 5
NsiI ATGCAT 2 cut(s) 154, 327
NspI RCATGY 3 cut(s) 484, 783, 1414
NspV TTCGAA 2 cut(s) 141, 927
PaeR7I CTCGAG 1 cut(s) 800
PciI ACATGT 1 cut(s) 480
PctI GAATGC 2 cut(s) 327, 565
PdiI GCCGGC 1 cut(s) 1408
PfeI GAWTC 2 cut(s) 446, 731
PflMI CCANNNNNTGG 1 cut(s) 1312
PfoI TCCNGGA 1 cut(s) 1717
PkrI GCNGC 4 cut(s) 796, 1094, 1333, 1597
PleI GAGTC 2 cut(s) 197, 856
PluTI GGCGCC 1 cut(s) 165
PpsI GAGTC 2 cut(s) 197, 856
Ppu21I YACGTR 3 cut(s) 357, 515, 938
PscI ACATGT 1 cut(s) 480
PshAI GACNNNNGTC 1 cut(s) 1490
PsiI TTATAA 1 cut(s) 1238
Psp6I CCWGG 3 cut(s) 1162, 1471, 1717
PspGI CCWGG 3 cut(s) 1162, 1471, 1717
PspN4I GGNNCC 2 cut(s) 163, 902
PspPI GGNCC 2 cut(s) 127, 1262
PspXI VCTCGAGB 1 cut(s) 800
PstNI CAGNNNCTG 1 cut(s) 1013
PsuI RGATCY 2 cut(s) 34, 1231
PvuII CAGCTG 2 cut(s) 209, 794
RsaI GTAC 5 cut(s) 359, 578, 671, 936, 1608
RsaNI GTAC 5 cut(s) 358, 577, 670, 935, 1607
RseI CAYNNNNRTG 2 cut(s) 485, 1037
SaqAI TTAA 4 cut(s) 339, 741, 1590, 1707
SatI GCNGC 4 cut(s) 795, 1093, 1332, 1596
Sau3AI GATC 7 cut(s) 34, 196, 261, 474, 1004, 1192, 1231
Sau96I GGNCC 2 cut(s) 127, 1262
SchI GAGTC 2 cut(s) 197, 857
ScrFI CCNGG 6 cut(s) 574, 630, 1045, 1164, 1473, 1719
SduI GDGCHC 2 cut(s) 787, 1107
SfaNI GCATC 5 cut(s) 139, 499, 901, 1079, 1466
SfoI GGCGCC 1 cut(s) 163
Sfr274I CTCGAG 1 cut(s) 800
SfuI TTCGAA 2 cut(s) 141, 927
SlaI CTCGAG 1 cut(s) 800
SmiMI CAYNNNNRTG 2 cut(s) 485, 1037
SmlI CTYRAG 4 cut(s) 371, 800, 1452, 1539
SmoI CTYRAG 4 cut(s) 371, 800, 1452, 1539
SnaBI TACGTA 1 cut(s) 357
SpeI ACTAGT 2 cut(s) 1712, 1723
SsiI CCGC 4 cut(s) 135, 383, 689, 1002
SspDI GGCGCC 1 cut(s) 161
SspI AATATT 1 cut(s) 640
SspMI CTAG 4 cut(s) 101, 1617, 1713, 1724
StyD4I CCNGG 6 cut(s) 572, 628, 1043, 1162, 1471, 1717
StyI CCWWGG 1 cut(s) 303
TaaI ACNGT 3 cut(s) 390, 538, 1676
TaiI ACGT 3 cut(s) 359, 517, 940
TfiI GAWTC 2 cut(s) 446, 731
Tru1I TTAA 4 cut(s) 339, 741, 1590, 1707
Tru9I TTAA 4 cut(s) 339, 741, 1590, 1707
TscAI CASTG 2 cut(s) 926, 1681
TseFI GTSAC 2 cut(s) 754, 1735
TseI GCWGC 4 cut(s) 794, 1092, 1331, 1595
Tsp45I GTSAC 2 cut(s) 754, 1735
TspDTI ATGAA 6 cut(s) 39, 407, 540, 596, 1154, 1336
TspRI CASTG 2 cut(s) 926, 1681
Van91I CCANNNNNTGG 1 cut(s) 1312
VneI GTGCAC 1 cut(s) 783
XapI RAATTY 2 cut(s) 816, 1551
XceI RCATGY 3 cut(s) 484, 783, 1414
XhoI CTCGAG 1 cut(s) 800
XmiI GTMKAC 2 cut(s) 275, 1149
XspI CTAG 4 cut(s) 101, 1617, 1713, 1724
Zsp2I ATGCAT 2 cut(s) 154, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.