Rmu_sc0010614.1_g000005

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010614.1
OG0017363
Physical Location & Seq
Forward (+)
23371 .. 25571
2201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010614.1_g000005.1.cds

Sequence Viewer

Length: 2082 bp
atgcgtactctgttaaagccactactagcacaaaacccatgtttcatcttagactatgcaccaattttccagtccttaactgggcaaaacttgttgaagctaggccaacaggtccacacccatatggtcctgcgtggcctcgaacccaatgcctatcttggcgccaagatggttgcaatgtacgccagctctggtgatcttgactcagctgtaaatgtctttcacagagtaaaatacccatctccacttttgtacaattcgattattcgggcttatacccttcatggttactctgcgagaactatggaaatttatggtcagatgcattgtttaggcctaaagggtgatcattttacctacccttttgtgctcaagtgttgtgcagagttctcgaatatttggatagggaaatgtgttcatgggctgagcttgagaactgggttggagtcggatatgtatgttgggacttctttgattgacatgtatgtgaaatgttgtgagatggggagtgcacgtaagctgttcgatgaaatgtcactgagagacgtttcgtcgtggaatgcgttgattgcggggtacatgagagagggtgagatttgttctgctgaggagttgtttggacaaatgaggtgcaagaatattgtgtcttggactgctatgatatcggggtatgcgcagaatgggctggctgagcaggcattgagcgtgtttgatgagatgttgaagaatgattcggaggttaagccgaattgggtgacggtaatgagtgttcttcctgcatgtgcacattcggccgcgctagagcgggggaggaagattcacaagtttgctagcgggattggtttggactcgaatgcttccatacagaccgcgctggtagcaatgtatgctaaatgtgggagcctttctgatgctcgtcagtgttttgataggattcgtggaagtgagaagaatttggttgtatggaatactatgatcactgcttatgcgtcccatgcccgcggatcagaagctgtgtccacttttgaggacatgatgagcgccggtgttcaacctgatcatataacattcacgggattgttatctgggtgcagtcattcagggcttgttgatgttggcttgaaatactttgatggcatgaagacagtatactctgttgaaccaagagttgaacattatgcttgtgttgttgatctattgggtcgtgcagggcgattgatggaagcaatggacgtcgtagataaaatgccaatgcaagcagggccaagcatttggggtgcactgttatcagcttgtcgaaaccacccaaacttggaaattgccgaaactgcagccagaaatctcttcattttggaaccagacaacagtggcaactatgtcctgctatctaatatatatgctgaagctggcatgtggaaggaggtggacaaattgagaattctattaaaatctcaagggatgaagaagagccctggaggcagttggatagaggtcaatgggaaagcccatctgtttcttggtggagatacatctcactctcaagcaaatgaaatttacatgttactggaggagttaccgaaaaggatgaaggcagctggttatgtacctgacactaggtttgctttgcatgatgttagtgaagaggagaaagaacataaccttacaacccacagtgaaaagcttgccattgcctttggacttcttaataccgatcctggagcagttcttcgtgtgacaaagaaccttagaatttgtggagattgtcatacagccaccaagttcatatctagaatctatgggagggagattatcgtaagagacgtgaatcgattccatcactttaaagatgggcactgttcatatggatataacaaatccccagcgacacgtcctgctttgacaatgttgccaaaggaagaactagagccaggttcgaagctatattacaatgttaatgactgcaacaagctgatcattctgggttcaaaactggaagacattcatgaacctttagaagctgatgcaaaccatggtttgatcggcagagaggaagctcttgttttctcgttgttttctaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

693

Amino Acids

76.83

Weight (kDa)

6.5

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017363)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18340
malus_domestica MD07G1165900.v1.1
prunus_persica Prupe.2G205400_v2.0.a1
pyrus_communis pycom07g16150
rosa_chinensis RchiOBHm_Chr1g0362051
rosa_laevigata RLG00000002139 RLG00000027677
rosa_multiflora Rmu_sc0010614.1_g000005 Rmu_sc0020775.1_g000001
rosa_roxburghii Rroxscaffold_4G00294570
rosa_rugosa Rorug01G0293100
rosa_samantha Rh1BG266600
rosa_wichuraiana Rw1G027010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1236
Acc16I TGCGCA 1 cut(s) 675
AccB1I GGYRCC 1 cut(s) 161
AccBSI CCGCTC 1 cut(s) 805
AccI GTMKAC 1 cut(s) 1149
AccII CGCG 3 cut(s) 797, 872, 1002
AciI CCGC 7 cut(s) 572, 795, 805, 834, 870, 1000, 1002
AclWI GGATC 2 cut(s) 1012, 1706
AcoI YGGCCR 1 cut(s) 792
AcsI RAATTY 5 cut(s) 309, 952, 1437, 1551, 1749
AcuI CTGAAG 1 cut(s) 1422
AcyI GRCGYC 2 cut(s) 162, 1233
AfaI GTAC 5 cut(s) 7, 182, 254, 578, 1605
AfiI CCNNNNNNNGG 2 cut(s) 81, 1312
AflIII ACRYGT 3 cut(s) 480, 1557, 1886
AgsI TTSAA 7 cut(s) 97, 724, 1052, 1123, 1160, 1172, 1986
AhdI GACNNNNNGTC 1 cut(s) 550
AjiI CACGTC 2 cut(s) 1822, 1889
AjnI CCWGG 3 cut(s) 1471, 1714, 1927
Alw21I GWGCWC 4 cut(s) 372, 514, 787, 1282
Alw26I GTCTC 2 cut(s) 537, 1812
Alw44I GTGCAC 3 cut(s) 510, 783, 1278
AlwI GGATC 2 cut(s) 1012, 1706
AlwNI CAGNNNCTG 1 cut(s) 1013
AoxI GGCC 5 cut(s) 103, 136, 334, 792, 1262
ApaLI GTGCAC 3 cut(s) 510, 783, 1278
ApeKI GCWGC 2 cut(s) 1331, 1592
ApoI RAATTY 5 cut(s) 309, 952, 1437, 1551, 1749
ArsI GACNNNNNNTTYG 2 cut(s) 1601, 1633
Asp700I GAANNNNTTC 2 cut(s) 1829, 1998
AspLEI GCGC 5 cut(s) 164, 676, 799, 874, 1043
AspS9I GGNCC 3 cut(s) 112, 127, 1262
AsuHPI GGTGA 4 cut(s) 206, 356, 602, 766
AsuII TTCGAA 1 cut(s) 1934
AsuNHI GCTAGC 1 cut(s) 830
AvaII GGWCC 2 cut(s) 112, 127
BaeGI GKGCMC 4 cut(s) 514, 787, 1282, 1854
BanI GGYRCC 1 cut(s) 161
BanII GRGCYC 1 cut(s) 1472
BarI GAAGNNNNNNTAC 4 cut(s) 1133, 1165, 1928, 1960
BbsI GAAGAC 2 cut(s) 1148, 2001
Bbv12I GWGCWC 4 cut(s) 372, 514, 787, 1282
BbvCI CCTCAGC 1 cut(s) 606
BbvI GCAGC 2 cut(s) 1343, 1604
BccI CCATC 8 cut(s) 163, 247, 496, 1127, 1213, 1515, 1841, 1842
BcgI CGANNNNNNTGC 4 cut(s) 131, 165, 372, 406
BciT130I CCWGG 3 cut(s) 1473, 1716, 1929
BclI TGATCA 4 cut(s) 346, 975, 1057, 1971
BcoDI GTCTC 2 cut(s) 537, 1812
BfaI CTAG 7 cut(s) 26, 101, 800, 831, 1614, 1788, 1922
BfmI CTRYAG 1 cut(s) 1329
BfoI RGCGCY 2 cut(s) 165, 1044
BglI GCCNNNNNGGC 1 cut(s) 1476
BisI GCNGC 3 cut(s) 795, 1332, 1593
BlpI GCTNAGC 2 cut(s) 425, 690
BlsI GCNGC 3 cut(s) 796, 1333, 1594
Bme1390I CCNGG 3 cut(s) 1473, 1716, 1929
Bme18I GGWCC 2 cut(s) 112, 127
BmeRI GACNNNNNGTC 1 cut(s) 550
BmgBI CACGTC 2 cut(s) 1822, 1889
BmgT120I GGNCC 3 cut(s) 112, 127, 1262
BmiI GGNNCC 3 cut(s) 163, 902, 1356
BmrFI CCNGG 3 cut(s) 1473, 1716, 1929
BmrI ACTGGG 2 cut(s) 90, 447
BmsI GCATC 3 cut(s) 312, 901, 2011
BmtI GCTAGC 1 cut(s) 834
BmuI ACTGGG 2 cut(s) 90, 447
BpiI GAAGAC 2 cut(s) 1148, 2001
BpmI CTGGAG 3 cut(s) 1494, 1586, 1737
Bpu10I CCTNAGC 1 cut(s) 606
Bpu1102I GCTNAGC 2 cut(s) 425, 690
Bpu14I TTCGAA 1 cut(s) 1934
BpuEI CTTGAG 4 cut(s) 356, 451, 1437, 1524
Bsa29I ATCGAT 1 cut(s) 1828
BsaAI YACGTR 1 cut(s) 515
BsaBI GATNNNNATC 1 cut(s) 1081
BsaHI GRCGYC 2 cut(s) 162, 1233
BsaJI CCNNGG 3 cut(s) 1000, 1471, 2029
BsaXI ACNNNNNCTCC 2 cut(s) 499, 529
Bsc4I CCNNNNNNNGG 2 cut(s) 81, 1312
Bse118I RCCGGY 1 cut(s) 1043
Bse1I ACTGG 5 cut(s) 70, 85, 442, 1569, 1995
Bse3DI GCAATG 4 cut(s) 183, 888, 1233, 1686
Bse8I GATNNNNATC 1 cut(s) 1081
BseBI CCWGG 3 cut(s) 1473, 1716, 1929
BseCI ATCGAT 1 cut(s) 1828
BseDI CCNNGG 3 cut(s) 1000, 1471, 2029
BseGI GGATG 2 cut(s) 1464, 1590
BseJI GATNNNNATC 1 cut(s) 1081
BseLI CCNNNNNNNGG 2 cut(s) 81, 1312
BseMI GCAATG 4 cut(s) 183, 888, 1233, 1686
BseMII CTCAG 5 cut(s) 219, 416, 530, 597, 681
BseNI ACTGG 5 cut(s) 70, 85, 442, 1569, 1995
BseRI GAGGAG 3 cut(s) 623, 1583, 1658
BseSI GKGCMC 4 cut(s) 514, 787, 1282, 1854
BseX3I CGGCCG 1 cut(s) 792
BseXI GCAGC 2 cut(s) 1343, 1604
BseYI CCCAGC 1 cut(s) 1879
BsgI GTGCAG 3 cut(s) 402, 1111, 1227
Bsh1236I CGCG 3 cut(s) 797, 872, 1002
Bsh1285I CGRYCG 1 cut(s) 795
BshFI GGCC 5 cut(s) 105, 138, 336, 794, 1264
BshNI GGYRCC 1 cut(s) 161
BshVI ATCGAT 1 cut(s) 1828
BsiEI CGRYCG 1 cut(s) 795
BsiHKAI GWGCWC 4 cut(s) 372, 514, 787, 1282
BsiSI CCGG 1 cut(s) 1044
BslFI GGGAC 2 cut(s) 478, 976
BslI CCNNNNNNNGG 2 cut(s) 81, 1312
BsmAI GTCTC 2 cut(s) 537, 1812
BsmBI CGTCTC 2 cut(s) 537, 1812
BsmFI GGGAC 2 cut(s) 478, 976
BsmI GAATGC 2 cut(s) 565, 859
BsnI GGCC 5 cut(s) 105, 138, 336, 794, 1264
Bsp119I TTCGAA 1 cut(s) 1934
Bsp1286I GDGCHC 6 cut(s) 372, 514, 787, 1282, 1472, 1854
Bsp1407I TGTACA 1 cut(s) 252
Bsp143I GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
Bsp1720I GCTNAGC 2 cut(s) 425, 690
Bsp19I CCATGG 1 cut(s) 2029
BspACI CCGC 7 cut(s) 572, 795, 805, 834, 870, 1000, 1002
BspANI GGCC 5 cut(s) 105, 138, 336, 794, 1264
BspCNI CTCAG 5 cut(s) 218, 417, 531, 598, 682
BspDI ATCGAT 1 cut(s) 1828
BspFNI CGCG 3 cut(s) 797, 872, 1002
BspHI TCATGA 1 cut(s) 2002
BspLI GGNNCC 3 cut(s) 163, 902, 1356
BspMAI CTGCAG 1 cut(s) 1333
BspOI GCTAGC 1 cut(s) 834
BspPI GGATC 2 cut(s) 1012, 1706
BspQI GCTCTTC 1 cut(s) 1460
BspT104I TTCGAA 1 cut(s) 1934
BspT107I GGYRCC 1 cut(s) 161
BsrBI CCGCTC 1 cut(s) 805
BsrDI GCAATG 4 cut(s) 183, 888, 1233, 1686
BsrFI RCCGGY 1 cut(s) 1043
BsrGI TGTACA 1 cut(s) 252
BsrI ACTGG 5 cut(s) 70, 85, 442, 1569, 1995
BssAI RCCGGY 1 cut(s) 1043
BssECI CCNNGG 3 cut(s) 1000, 1471, 2029
BssMI GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
BssNAI GTATAC 1 cut(s) 1150
BssNI GRCGYC 2 cut(s) 162, 1233
BssT1I CCWWGG 1 cut(s) 2029
Bst1107I GTATAC 1 cut(s) 1150
Bst2UI CCWGG 3 cut(s) 1473, 1716, 1929
Bst4CI ACNGT 6 cut(s) 760, 1147, 1284, 1367, 1673, 1856
Bst6I CTCTTC 3 cut(s) 1349, 1460, 1635
BstACI GRCGYC 2 cut(s) 162, 1233
BstAPI GCANNNNNTGC 1 cut(s) 887
BstAUI TGTACA 1 cut(s) 252
BstBAI YACGTR 1 cut(s) 515
BstBI TTCGAA 1 cut(s) 1934
BstC8I GCNNGC 8 cut(s) 187, 687, 696, 832, 1000, 1257, 1408, 1683
BstDEI CTNAG 7 cut(s) 49, 205, 425, 539, 606, 690, 1745
BstDSI CCRYGG 2 cut(s) 1000, 2029
BstF5I GGATG 2 cut(s) 1464, 1590
BstFNI CGCG 3 cut(s) 797, 872, 1002
BstH2I RGCGCY 2 cut(s) 165, 1044
BstHHI GCGC 5 cut(s) 164, 676, 799, 874, 1043
BstKTI GATC 9 cut(s) 199, 349, 978, 1007, 1060, 1195, 1714, 1974, 2040
BstMAI GTCTC 2 cut(s) 537, 1812
BstMBI GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
BstMCI CGRYCG 1 cut(s) 795
BstNI CCWGG 3 cut(s) 1473, 1716, 1929
BstNSI RCATGY 4 cut(s) 484, 783, 1414, 1561
BstSCI CCNGG 3 cut(s) 1471, 1714, 1927
BstSFI CTRYAG 1 cut(s) 1329
BstSLI GKGCMC 4 cut(s) 514, 787, 1282, 1854
BstUI CGCG 3 cut(s) 797, 872, 1002
BstV1I GCAGC 2 cut(s) 1343, 1604
BstV2I GAAGAC 2 cut(s) 1148, 2001
BstXI CCANNNNNNTGG 1 cut(s) 1272
BstZ17I GTATAC 1 cut(s) 1150
BstZI CGGCCG 1 cut(s) 792
Bsu15I ATCGAT 1 cut(s) 1828
BsuRI GGCC 5 cut(s) 105, 138, 336, 794, 1264
BsuTUI ATCGAT 1 cut(s) 1828
BtgI CCRYGG 2 cut(s) 1000, 2029
BtrI CACGTC 2 cut(s) 1822, 1889
BtsCI GGATG 2 cut(s) 1464, 1590
BtsI GCAGTG 1 cut(s) 978
BtsIMutI CAGTG 7 cut(s) 536, 926, 978, 1280, 1372, 1678, 1852
Cac8I GCNNGC 8 cut(s) 187, 687, 696, 832, 1000, 1257, 1408, 1683
CaiI CAGNNNCTG 1 cut(s) 1013
CciI TCATGA 1 cut(s) 2002
CfoI GCGC 5 cut(s) 164, 676, 799, 874, 1043
Cfr10I RCCGGY 1 cut(s) 1043
Cfr13I GGNCC 3 cut(s) 112, 127, 1262
Cfr42I CCGCGG 1 cut(s) 1003
ClaI ATCGAT 1 cut(s) 1828
CseI GACGC 1 cut(s) 978
Csp6I GTAC 5 cut(s) 6, 181, 253, 577, 1604
CviQI GTAC 5 cut(s) 6, 181, 253, 577, 1604
DdeI CTNAG 7 cut(s) 49, 205, 425, 539, 606, 690, 1745
DinI GGCGCC 1 cut(s) 163
DpnI GATC 9 cut(s) 198, 348, 977, 1006, 1059, 1194, 1713, 1973, 2039
DpnII GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
DraI TTTAAA 1 cut(s) 1843
DriI GACNNNNNGTC 1 cut(s) 550
EaeI YGGCCR 1 cut(s) 792
EagI CGGCCG 1 cut(s) 792
Eam1104I CTCTTC 3 cut(s) 1349, 1460, 1635
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 3 cut(s) 1349, 1460, 1635
EclXI CGGCCG 1 cut(s) 792
Eco130I CCWWGG 1 cut(s) 2029
Eco147I AGGCCT 1 cut(s) 336
Eco24I GRGCYC 1 cut(s) 1472
Eco32I GATATC 1 cut(s) 663
Eco47I GGWCC 2 cut(s) 112, 127
Eco52I CGGCCG 1 cut(s) 792
Eco57I CTGAAG 1 cut(s) 1422
EcoRI GAATTC 1 cut(s) 1437
EcoRII CCWGG 3 cut(s) 1471, 1714, 1927
EcoRV GATATC 1 cut(s) 663
EcoT14I CCWWGG 1 cut(s) 2029
EcoT22I ATGCAT 1 cut(s) 327
EcoT38I GRGCYC 1 cut(s) 1472
EgeI GGCGCC 1 cut(s) 163
EheI GGCGCC 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 2029
Esp3I CGTCTC 2 cut(s) 537, 1812
FaqI GGGAC 2 cut(s) 478, 976
FauI CCCGC 4 cut(s) 565, 798, 827, 1007
FauNDI CATATG 2 cut(s) 123, 1861
FbaI TGATCA 4 cut(s) 346, 975, 1057, 1971
FblI GTMKAC 1 cut(s) 1149
Fnu4HI GCNGC 3 cut(s) 795, 1332, 1593
FokI GGATG 2 cut(s) 1471, 1597
FriOI GRGCYC 1 cut(s) 1472
Fsp4HI GCNGC 3 cut(s) 795, 1332, 1593
FspBI CTAG 7 cut(s) 26, 101, 800, 831, 1614, 1788, 1922
FspI TGCGCA 1 cut(s) 675
GlaI GCGC 5 cut(s) 163, 675, 798, 873, 1042
GluI GCNGC 3 cut(s) 795, 1332, 1593
GsaI CCCAGC 1 cut(s) 1883
GsuI CTGGAG 3 cut(s) 1494, 1586, 1737
HaeII RGCGCY 2 cut(s) 165, 1044
HaeIII GGCC 5 cut(s) 105, 138, 336, 794, 1264
HapII CCGG 1 cut(s) 1044
HgaI GACGC 1 cut(s) 978
HhaI GCGC 5 cut(s) 164, 676, 799, 874, 1043
Hin1I GRCGYC 2 cut(s) 162, 1233
Hin6I GCGC 5 cut(s) 162, 674, 797, 872, 1041
HinP1I GCGC 5 cut(s) 162, 674, 797, 872, 1041
HindIII AAGCTT 1 cut(s) 1679
HinfI GANTC 9 cut(s) 203, 446, 731, 817, 848, 934, 1791, 1825, 1830
HpaII CCGG 1 cut(s) 1044
HphI GGTGA 4 cut(s) 206, 356, 602, 766
Hpy166II GTNNAC 7 cut(s) 115, 512, 785, 1020, 1150, 1280, 1426
Hpy188I TCNGA 5 cut(s) 321, 451, 736, 910, 1009
Hpy188III TCNNGA 4 cut(s) 200, 391, 1788, 2003
Hpy8I GTNNAC 7 cut(s) 115, 512, 785, 1020, 1150, 1280, 1426
Hpy99I CGWCG 2 cut(s) 556, 1238
HpyAV CCTTC 3 cut(s) 290, 1411, 1582
HpyCH4III ACNGT 6 cut(s) 760, 1147, 1284, 1367, 1673, 1856
HpyCH4IV ACGT 5 cut(s) 514, 546, 1233, 1821, 1888
HpyF3I CTNAG 7 cut(s) 49, 205, 425, 539, 606, 690, 1745
HpySE526I ACGT 5 cut(s) 514, 546, 1233, 1821, 1888
Hsp92I GRCGYC 2 cut(s) 162, 1233
HspAI GCGC 5 cut(s) 162, 674, 797, 872, 1041
KasI GGCGCC 1 cut(s) 161
Ksp22I TGATCA 4 cut(s) 346, 975, 1057, 1971
KspI CCGCGG 1 cut(s) 1003
Kzo9I GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
LguI GCTCTTC 1 cut(s) 1460
LmnI GCTCC 2 cut(s) 900, 1718
Lsp1109I GCAGC 2 cut(s) 1343, 1604
LweI GCATC 3 cut(s) 312, 901, 2011
MaeI CTAG 7 cut(s) 26, 101, 800, 831, 1614, 1788, 1922
MaeII ACGT 5 cut(s) 514, 546, 1233, 1821, 1888
MaeIII GTNAC 6 cut(s) 287, 534, 754, 1560, 1572, 1732
MalI GATC 9 cut(s) 198, 348, 977, 1006, 1059, 1194, 1713, 1973, 2039
MbiI CCGCTC 1 cut(s) 805
MboI GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
MhlI GDGCHC 6 cut(s) 372, 514, 787, 1282, 1472, 1854
Mly113I GGCGCC 1 cut(s) 162
MlyI GAGTC 3 cut(s) 197, 455, 842
MmeI TCCRAC 3 cut(s) 423, 429, 1463
Mph1103I ATGCAT 1 cut(s) 327
MroXI GAANNNNTTC 2 cut(s) 1829, 1998
MseI TTAA 7 cut(s) 14, 77, 741, 1445, 1704, 1842, 1953
MslI CAYNNNNRTG 2 cut(s) 122, 485
MspA1I CMGCKG 3 cut(s) 209, 1002, 1595
MspI CCGG 1 cut(s) 1044
MspR9I CCNGG 3 cut(s) 1473, 1716, 1929
Mva1269I GAATGC 2 cut(s) 565, 859
MvaI CCWGG 3 cut(s) 1473, 1716, 1929
MvnI CGCG 3 cut(s) 797, 872, 1002
NarI GGCGCC 1 cut(s) 162
NcoI CCATGG 1 cut(s) 2029
NdeI CATATG 2 cut(s) 123, 1861
NdeII GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
NheI GCTAGC 1 cut(s) 830
NlaIV GGNNCC 3 cut(s) 163, 902, 1356
NmuCI GTSAC 3 cut(s) 534, 754, 1732
NsbI TGCGCA 1 cut(s) 675
NsiI ATGCAT 1 cut(s) 327
NspI RCATGY 4 cut(s) 484, 783, 1414, 1561
NspV TTCGAA 1 cut(s) 1934
PagI TCATGA 1 cut(s) 2002
PceI AGGCCT 1 cut(s) 336
PciI ACATGT 2 cut(s) 480, 1557
PciSI GCTCTTC 1 cut(s) 1460
PcsI WCGNNNNNNNCGW 3 cut(s) 560, 1210, 1818
PctI GAATGC 2 cut(s) 565, 859
PdmI GAANNNNTTC 2 cut(s) 1829, 1998
PfeI GAWTC 6 cut(s) 731, 817, 934, 1791, 1825, 1830
PfoI TCCNGGA 1 cut(s) 1714
PkrI GCNGC 3 cut(s) 796, 1333, 1594
PleI GAGTC 3 cut(s) 197, 454, 842
PluTI GGCGCC 1 cut(s) 165
PpsI GAGTC 3 cut(s) 197, 454, 842
Ppu21I YACGTR 1 cut(s) 515
PscI ACATGT 2 cut(s) 480, 1557
Psp6I CCWGG 3 cut(s) 1471, 1714, 1927
PspFI CCCAGC 1 cut(s) 1879
PspGI CCWGG 3 cut(s) 1471, 1714, 1927
PspN4I GGNNCC 3 cut(s) 163, 902, 1356
PspPI GGNCC 3 cut(s) 112, 127, 1262
PsrI GAACNNNNNNTAC 2 cut(s) 753, 785
PstI CTGCAG 1 cut(s) 1333
PstNI CAGNNNCTG 1 cut(s) 1013
PvuII CAGCTG 2 cut(s) 209, 1595
RsaI GTAC 5 cut(s) 7, 182, 254, 578, 1605
RsaNI GTAC 5 cut(s) 6, 181, 253, 577, 1604
RseI CAYNNNNRTG 2 cut(s) 122, 485
SacII CCGCGG 1 cut(s) 1003
SapI GCTCTTC 1 cut(s) 1460
SaqAI TTAA 7 cut(s) 14, 77, 741, 1445, 1704, 1842, 1953
SatI GCNGC 3 cut(s) 795, 1332, 1593
Sau3AI GATC 9 cut(s) 196, 346, 975, 1004, 1057, 1192, 1711, 1971, 2037
Sau96I GGNCC 3 cut(s) 112, 127, 1262
SchI GAGTC 3 cut(s) 197, 455, 842
ScrFI CCNGG 3 cut(s) 1473, 1716, 1929
SduI GDGCHC 6 cut(s) 372, 514, 787, 1282, 1472, 1854
SfaNI GCATC 3 cut(s) 312, 901, 2011
SfcI CTRYAG 1 cut(s) 1329
SfoI GGCGCC 1 cut(s) 163
Sfr303I CCGCGG 1 cut(s) 1003
SfuI TTCGAA 1 cut(s) 1934
SgrAI CRCCGGYG 1 cut(s) 1043
SgrBI CCGCGG 1 cut(s) 1003
SinI GGWCC 2 cut(s) 112, 127
SmiMI CAYNNNNRTG 2 cut(s) 122, 485
SmlI CTYRAG 4 cut(s) 371, 430, 1452, 1539
SmoI CTYRAG 4 cut(s) 371, 430, 1452, 1539
SseBI AGGCCT 1 cut(s) 336
SsiI CCGC 7 cut(s) 572, 795, 805, 834, 870, 1000, 1002
SspDI GGCGCC 1 cut(s) 161
SspI AATATT 2 cut(s) 397, 640
SspMI CTAG 7 cut(s) 26, 101, 800, 831, 1614, 1788, 1922
StuI AGGCCT 1 cut(s) 336
StyD4I CCNGG 3 cut(s) 1471, 1714, 1927
StyI CCWWGG 1 cut(s) 2029
TaaI ACNGT 6 cut(s) 760, 1147, 1284, 1367, 1673, 1856
TaiI ACGT 5 cut(s) 517, 549, 1236, 1824, 1891
TaqI TCGA 8 cut(s) 141, 260, 392, 525, 851, 1297, 1828, 1934
TatI WGTACW 1 cut(s) 252
TauI GCSGC 1 cut(s) 797
TfiI GAWTC 6 cut(s) 731, 817, 934, 1791, 1825, 1830
Tru1I TTAA 7 cut(s) 14, 77, 741, 1445, 1704, 1842, 1953
Tru9I TTAA 7 cut(s) 14, 77, 741, 1445, 1704, 1842, 1953
TscAI CASTG 7 cut(s) 543, 926, 985, 1287, 1372, 1678, 1859
TseFI GTSAC 3 cut(s) 534, 754, 1732
TseI GCWGC 2 cut(s) 1331, 1592
Tsp45I GTSAC 3 cut(s) 534, 754, 1732
TspRI CASTG 7 cut(s) 543, 926, 985, 1287, 1372, 1678, 1859
VneI GTGCAC 3 cut(s) 510, 783, 1278
VpaK11BI GGWCC 2 cut(s) 112, 127
XapI RAATTY 5 cut(s) 309, 952, 1437, 1551, 1749
XbaI TCTAGA 1 cut(s) 1787
XceI RCATGY 4 cut(s) 484, 783, 1414, 1561
XcmI CCANNNNNNNNNTGG 2 cut(s) 77, 1514
XmiI GTMKAC 1 cut(s) 1149
XmnI GAANNNNTTC 2 cut(s) 1829, 1998
XspI CTAG 7 cut(s) 26, 101, 800, 831, 1614, 1788, 1922
ZraI GACGTC 1 cut(s) 1234
Zsp2I ATGCAT 1 cut(s) 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.