FvH4_7g20740

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0009717
Physical Location & Seq
Forward (+)
16796103 .. 16801921
5819 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g20740.t2

Sequence Viewer

Length: 3099 bp
ATGGATATCCCAGATATAACATTGCGAGAGATAGTTCAGAGTAGTTCAGTGTCAAATACAGAGTCAAATTCCATGAAAGATGGGCACAAGACAAGTGAAAGATGGTTTGGACTAGAGACTTTAAAGAGTGCAGTAGGAAGAATGGTAAAGGAAATTCTTGATCCTGAGGGACCAATCCTTGAAAAGTGGAATGTGATATTTGTAATATCATGTCTCTTTGCTGTGTTACTGGATCCTTTGTTCCTCTACATTCCTTTGATCAACCATGACGTGAAGTGCATTGGACTAGACAAAAAGTTGAAGATAGCAGCTGTGGTTTTCCGATTGATCACAGATTTCGTTTATATAGTGAAAATCATTTTTCAGATATATGAACTCGAGAAAGTAACAGTTATGGCTATATGGAGGTCGACATATATCCTACTTGACATTTTAGCAGTTCTCCCCATTCCACAGGTTACAATCCTCATTTACTTTACGAAAATGAGAGCCTCGAGATCTTTGAATACTAGGAAGTTCTTAAACTTTCTTGTTCTAATCCAATATGTTCCACGAGTCCTTCGCATTTATCTCGCATGTAAGGAAATAAAAAATTCTCCTAAAGGAAAGTTAGGATTATGGATTAAAGGTGGACTCAATTTTCTTATGTACATCTTTGCCAGTCATATACTTGGAGGCTTCTGGTACTTCTTTTCTGTTCAGCGAATGATAGCTTGCTGGCAATATGCTTGTCGAGATGAAGATGGATGTAAACCTAGTACCTTTAACTGTAATGATCGTCGAACAAATGATGATATCAAACTGCTAAATGATTCATGTCCCATAAATCCATCAGATGAAACTATCTTTGACTTTGGCATATTTCTCGATGCTCTTCAATCTGGTTTAGTTGGATCAACAGATTATTCACAGAAGTTGTCAAATTGTTTTTGGTGGGGTCTTCGAAATTTGAGTTCTCTTGGTTCAGACCTCAAACCCAGTATTAATACATGGGAAAACTTGTTTGCGGCTCTTACTTCAATTATGGGCTTGTTACTTTTCCTATATCTCATAGGAAATTTGCAGATGTACATGCAGGTGGAATCAGCAAGTAAAGAGCAACTACGATGGCAGACAGACCTTAAAAAAATGATGATAGCTGAAAGGAAGATTAGAATTGAACGGAGCAAGGGTCCAGAGGTAGAAAAATGGCTGGCCAAAAATTATCTCCCTAAGCGTTTCCTGACCGAGATCATGGAAAAGGTAGTAGAAGTGGATTTAGAACAAAACAGGGATGTTGATGTGGAAAAAATCCAATCGATTCTTCCCGTGCAACTTCAAAGCTATATTATAGTTTATAAGGAGAAGCTGGAAAAAGAAGGTGACAAGATAAAATTGTGGTTATCCAAAAATCGCCTCCCCCTGCGTTTAAAGTCTGAGATTATAGAAGCGGTAGCGCAACGACCAGAATTTGAACAAAACGGGGTGGTTATAGATGTGAATAATGTTCTTTCTATCCTTCCCTCTCAACTTAGTAGTTATATAGAAAGTTATATACAGAACTTGCGGCAGAAAGACGAAGAGATAGGTATGTGGTTGTCTGAAAACGAGTTGTCTGAGAATTTCAAGTCAGAAATCATGGAGGCGGTTCTGGTAATTTTAGAAGAAGACAAGGAGGTTGATGTGAAGAATATCCTCACTATTCTTCCCATGCCACTTGACGAGCGTATCAGAGAGAATATGCGGCTTCTGAAAATTGACCGGAAGATGAAAGGTGCAGATTTGTGGCTGCTTAAGAATGGCATCCCTAGTTCAAAGAAGTCGGATATCAAGGAGGCGGTTCGACTAGAACTTAACAAAGATGCGGATATTGATGTGGAGAATTTCCTCTCCACAGTCGAATGGATCCAAGAGTTTCTGCCTTTTAATAGGCTGAAGAGGTTGAAGTTATTGGAAGTATTGGATGGAAGTGTGTTAAAAGCAATATGTGAGCATCTCAAGCCTGTAGAGTATGATTCAAGCTCGTACATTATTCAAGAGGGTCAACCACTTGAAGTGATTCTCTTCGTGGAAGGAACTGTCTTTTTTGAAAAAAAACGAAATGGGTGTAGCCTGTACGCACCACTAGTCTGGGGAGAAGAACTTCTGGTTTGGCCATCCTCGACCTCCTTTCCTGCTGAAGTACCGATAGCAACTGACACTCTTTCCACCGGTTGGTATTGGTTACATGGAACTACAAACGCCCTAGTCCTCACTGCCACCGATATGGAGAGCATAGGCTCTACATTCAGGCCACAGTTTGATCTACTTACCTCACACTGGTTGACTAGGCTGAAGAAAGTGCCAAAGCTTCAATGTATGGATGAAGAAGTGCTTAAAGCTATATTTCTGCATCTCAAGCAGGATTTGAATCCACTATATTCTTACCTAGAGAATCAACCAGTTGCATCCATGACTTTCATCATTGAGGGATCTGTAAAATTCACAAGAAATGACAACGATTGTGAGGAACTTGTCCGTCGTGATGGAGAAGTTTATGGAGAAGAAATCCTAGATTGGGTATTAGATACGTCGTTTCCTACCTTAAGCCCCTTCGCCACTCACACTGCTATTTACGACCATGCCAATGCAGCTGTTCAGCTGTCTATCACTGCGGCAGAACTGAAGAGTGTAGGTTGTAAATTCAGATCATACTTCAGCACATTGCGGAAGGAATCTCAGCCAGATCTTTTGACTGTTGTTGGGTTGACTGTGTTAAAGAAAGTGCCGAAACTTAAGACTATGACCGAAGAAGTTTTGGAAGCAATCTCTCGGCAGCTTCAGTTTCGGAATAGTAATGGTTACGAGCATATCATTCCACCGGGAGAACCAGTTGACAGGATGTTGTTCGTTCTGAGGGGAAACCTACAACTATATTCAAAAGACGACGATTATCAAGAGGAAGAAAGATTCTTCGGAGAAGATCTAATAGATTGGCTAGCAAGGAGCTCTGATGGTACCAGACCCTTGTCAAATTATTATAAAGTCACAACAGCCATGAGTAAACAGACTCAGCTGCTCGTTCTCATGGCCGACGATTTGGAGAGTGTAGTGTCTGAATACAAGTCGCATTTCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

1033

Amino Acids

118.84

Weight (kDa)

5.38

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 39 - 336 4.9e-08 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1338, 3000
AarI CACCTGC 1 cut(s) 1066
Acc36I ACCTGC 1 cut(s) 1066
Acc65I GGTACC 1 cut(s) 2975
AccB1I GGYRCC 1 cut(s) 2975
AccB7I CCANNNNNTGG 1 cut(s) 2193
AccI GTMKAC 1 cut(s) 410
AciI CCGC 9 cut(s) 1007, 1430, 1546, 1625, 1723, 1817, 1844, 2633, 2686
AclWI GGATC 7 cut(s) 155, 227, 240, 901, 1879, 1892, 2458
AcoI YGGCCR 3 cut(s) 1194, 2132, 3048
AcuI CTGAAG 6 cut(s) 1934, 2178, 2333, 2659, 2663, 2783
AfaI GTAC 8 cut(s) 650, 686, 760, 1070, 2006, 2096, 2163, 2977
AfiI CCNNNNNNNGG 3 cut(s) 2193, 2298, 2536
AflII CTTAAG 3 cut(s) 1772, 2563, 2753
AgeI ACCGGT 1 cut(s) 2189
AhlI ACTAGT 1 cut(s) 2104
AjiI CACGTC 1 cut(s) 271
AjuI GAANNNNNNNTTGG 4 cut(s) 90, 122, 1287, 1319
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
Alw21I GWGCWC 1 cut(s) 2969
Alw26I GTCTC 2 cut(s) 110, 218
AlwI GGATC 7 cut(s) 155, 227, 240, 901, 1879, 1892, 2458
Ama87I CYCGRG 2 cut(s) 377, 493
AoxI GGCC 4 cut(s) 1194, 2132, 2270, 3048
ApeKI GCWGC 5 cut(s) 308, 1768, 2609, 2794, 3034
ArsI GACNNNNNNTTYG 2 cut(s) 47, 79
AseI ATTAAT 1 cut(s) 984
AsiGI ACCGGT 1 cut(s) 2189
Asp700I GAANNNNTTC 2 cut(s) 2037, 2121
Asp718I GGTACC 1 cut(s) 2975
AspLEI GCGC 1 cut(s) 1438
AspS9I GGNCC 2 cut(s) 170, 1172
AsuC2I CCSGG 1 cut(s) 2841
AsuHPI GGTGA 1 cut(s) 1373
AsuII TTCGAA 1 cut(s) 943
AsuNHI GCTAGC 1 cut(s) 2956
AvaI CYCGRG 2 cut(s) 377, 493
AvaII GGWCC 2 cut(s) 170, 1172
AxyI CCTNAGG 1 cut(s) 165
BaeGI GKGCMC 1 cut(s) 87
BaeI ACNNNNGTAYC 2 cut(s) 1690, 1723
BalI TGGCCA 2 cut(s) 1196, 2134
BamHI GGATCC 2 cut(s) 232, 1884
BanI GGYRCC 1 cut(s) 2975
BanII GRGCYC 1 cut(s) 2969
BauI CACGAG 1 cut(s) 552
BbsI GAAGAC 2 cut(s) 932, 1653
Bbv12I GWGCWC 1 cut(s) 2969
BbvI GCAGC 5 cut(s) 320, 1755, 2621, 2806, 3021
BccI CCATC 9 cut(s) 74, 96, 737, 838, 1101, 1937, 2143, 2498, 2966
BcgI CGANNNNNNTGC 4 cut(s) 553, 587, 847, 881
BclI TGATCA 2 cut(s) 258, 327
BcnI CCSGG 1 cut(s) 2841
BcoDI GTCTC 2 cut(s) 110, 218
BcuI ACTAGT 1 cut(s) 2104
BfmI CTRYAG 1 cut(s) 1983
BfrI CTTAAG 3 cut(s) 1772, 2563, 2753
BfuAI ACCTGC 1 cut(s) 1066
BglII AGATCT 3 cut(s) 497, 2704, 2941
BisI GCNGC 9 cut(s) 309, 1008, 1547, 1724, 1769, 2610, 2634, 2795, 3035
BlsI GCNGC 9 cut(s) 310, 1009, 1548, 1725, 1770, 2611, 2635, 2796, 3036
Bme1390I CCNGG 1 cut(s) 2841
Bme18I GGWCC 2 cut(s) 170, 1172
BmeT110I CYCGRG 2 cut(s) 377, 493
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 2 cut(s) 170, 1172
BmiI GGNNCC 5 cut(s) 171, 234, 1173, 1886, 2977
BmrFI CCNGG 1 cut(s) 2841
BmrI ACTGGG 1 cut(s) 972
BmsI GCATC 6 cut(s) 859, 1791, 1831, 1981, 2380, 2435
BmtI GCTAGC 1 cut(s) 2960
BmuI ACTGGG 1 cut(s) 972
BoxI GACNNNNGTC 1 cut(s) 2986
BpiI GAAGAC 2 cut(s) 932, 1653
Bpu10I CCTNAGC 1 cut(s) 1212
Bpu14I TTCGAA 1 cut(s) 943
BpuEI CTTGAG 2 cut(s) 1961, 2360
BpuMI CCSGG 1 cut(s) 2841
Bsa29I ATCGAT 1 cut(s) 1298
BsaBI GATNNNNATC 1 cut(s) 2388
BsaWI WCCGGW 2 cut(s) 1740, 2189
BsaXI ACNNNNNCTCC 4 cut(s) 1156, 1186, 2835, 2865
Bsc4I CCNNNNNNNGG 3 cut(s) 2193, 2298, 2536
Bse118I RCCGGY 1 cut(s) 2189
Bse1I ACTGG 6 cut(s) 234, 660, 978, 2303, 2420, 2849
Bse21I CCTNAGG 1 cut(s) 165
Bse3DI GCAATG 2 cut(s) 20, 2681
Bse8I GATNNNNATC 1 cut(s) 2388
BseCI ATCGAT 1 cut(s) 1298
BseGI GGATG 8 cut(s) 752, 1279, 1782, 1948, 2135, 2347, 2426, 2865
BseJI GATNNNNATC 1 cut(s) 2388
BseLI CCNNNNNNNGG 3 cut(s) 2193, 2298, 2536
BseMI GCAATG 2 cut(s) 20, 2681
BseMII CTCAG 6 cut(s) 156, 1407, 1587, 2711, 2864, 3044
BseNI ACTGG 6 cut(s) 234, 660, 978, 2303, 2420, 2849
BseSI GKGCMC 1 cut(s) 87
BseXI GCAGC 5 cut(s) 320, 1755, 2621, 2806, 3021
BsgI GTGCAG 2 cut(s) 150, 1776
BshFI GGCC 4 cut(s) 1196, 2134, 2272, 3050
BshNI GGYRCC 1 cut(s) 2975
BshTI ACCGGT 1 cut(s) 2189
BshVI ATCGAT 1 cut(s) 1298
BsiHKAI GWGCWC 1 cut(s) 2969
BsiHKCI CYCGRG 2 cut(s) 377, 493
BsiSI CCGG 3 cut(s) 1741, 2190, 2840
BslFI GGGAC 2 cut(s) 183, 804
BslI CCNNNNNNNGG 3 cut(s) 2193, 2298, 2536
BsmAI GTCTC 2 cut(s) 110, 218
BsmFI GGGAC 2 cut(s) 183, 804
BsnI GGCC 4 cut(s) 1196, 2134, 2272, 3050
BsoBI CYCGRG 2 cut(s) 377, 493
Bsp119I TTCGAA 1 cut(s) 943
Bsp1286I GDGCHC 2 cut(s) 87, 2969
Bsp1407I TGTACA 2 cut(s) 648, 1068
BspACI CCGC 9 cut(s) 1007, 1430, 1546, 1625, 1723, 1817, 1844, 2633, 2686
BspANI GGCC 4 cut(s) 1196, 2134, 2272, 3050
BspCNI CTCAG 6 cut(s) 157, 1408, 1588, 2710, 2865, 3043
BspDI ATCGAT 1 cut(s) 1298
BspLI GGNNCC 5 cut(s) 171, 234, 1173, 1886, 2977
BspMI ACCTGC 1 cut(s) 1066
BspOI GCTAGC 1 cut(s) 2960
BspPI GGATC 7 cut(s) 155, 227, 240, 901, 1879, 1892, 2458
BspQI GCTCTTC 1 cut(s) 879
BspT104I TTCGAA 1 cut(s) 943
BspT107I GGYRCC 1 cut(s) 2975
BspTI CTTAAG 3 cut(s) 1772, 2563, 2753
BsrDI GCAATG 2 cut(s) 20, 2681
BsrFI RCCGGY 1 cut(s) 2189
BsrGI TGTACA 2 cut(s) 648, 1068
BsrI ACTGG 6 cut(s) 234, 660, 978, 2303, 2420, 2849
BssAI RCCGGY 1 cut(s) 2189
BssSI CACGAG 1 cut(s) 552
Bst2BI CACGAG 1 cut(s) 552
Bst4CI ACNGT 7 cut(s) 391, 770, 1876, 2059, 2277, 2716, 2731
Bst6I CTCTTC 5 cut(s) 879, 1554, 1910, 2048, 2639
BstAFI CTTAAG 3 cut(s) 1772, 2563, 2753
BstAUI TGTACA 2 cut(s) 648, 1068
BstBI TTCGAA 1 cut(s) 943
BstC8I GCNNGC 4 cut(s) 715, 719, 1194, 2958
BstDEI CTNAG 8 cut(s) 165, 1212, 1416, 1511, 1596, 2697, 2873, 3030
BstF5I GGATG 8 cut(s) 752, 1279, 1782, 1948, 2135, 2347, 2426, 2865
BstHHI GCGC 1 cut(s) 1438
BstMAI GTCTC 2 cut(s) 110, 218
BstMWI GCNNNNNNNGC 3 cut(s) 1978, 2377, 2609
BstNSI RCATGY 2 cut(s) 579, 1075
BstPAI GACNNNNGTC 1 cut(s) 2986
BstSCI CCNGG 1 cut(s) 2839
BstSFI CTRYAG 1 cut(s) 1983
BstSLI GKGCMC 1 cut(s) 87
BstV1I GCAGC 5 cut(s) 320, 1755, 2621, 2806, 3021
BstV2I GAAGAC 2 cut(s) 932, 1653
BstX2I RGATCY 6 cut(s) 232, 497, 1884, 2450, 2704, 2941
BstXI CCANNNNNNTGG 2 cut(s) 2109, 2245
BstYI RGATCY 6 cut(s) 232, 497, 1884, 2450, 2704, 2941
Bsu15I ATCGAT 1 cut(s) 1298
Bsu36I CCTNAGG 1 cut(s) 165
BsuRI GGCC 4 cut(s) 1196, 2134, 2272, 3050
BsuTUI ATCGAT 1 cut(s) 1298
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 8 cut(s) 752, 1279, 1782, 1948, 2135, 2347, 2426, 2865
BtsI GCAGTG 3 cut(s) 2232, 2583, 2628
BtsIMutI CAGTG 5 cut(s) 54, 2232, 2296, 2583, 2628
BveI ACCTGC 1 cut(s) 1066
Cac8I GCNNGC 4 cut(s) 715, 719, 1194, 2958
CfoI GCGC 1 cut(s) 1438
Cfr10I RCCGGY 1 cut(s) 2189
Cfr13I GGNCC 2 cut(s) 170, 1172
ClaI ATCGAT 1 cut(s) 1298
Csp6I GTAC 8 cut(s) 649, 685, 759, 1069, 2005, 2095, 2162, 2976
CspAI ACCGGT 1 cut(s) 2189
CviQI GTAC 8 cut(s) 649, 685, 759, 1069, 2005, 2095, 2162, 2976
DdeI CTNAG 8 cut(s) 165, 1212, 1416, 1511, 1596, 2697, 2873, 3030
DraI TTTAAA 2 cut(s) 123, 1410
EaeI YGGCCR 3 cut(s) 1194, 2132, 3048
Eam1104I CTCTTC 5 cut(s) 879, 1554, 1910, 2048, 2639
EarI CTCTTC 5 cut(s) 879, 1554, 1910, 2048, 2639
Ecl136II GAGCTC 1 cut(s) 2967
Eco24I GRGCYC 1 cut(s) 2969
Eco32I GATATC 3 cut(s) 7, 796, 1807
Eco47I GGWCC 2 cut(s) 170, 1172
Eco53kI GAGCTC 1 cut(s) 2967
Eco57I CTGAAG 6 cut(s) 1934, 2178, 2333, 2659, 2663, 2783
Eco81I CCTNAGG 1 cut(s) 165
Eco88I CYCGRG 2 cut(s) 377, 493
EcoICRI GAGCTC 1 cut(s) 2967
EcoRV GATATC 3 cut(s) 7, 796, 1807
EcoT38I GRGCYC 1 cut(s) 2969
FalI AAGNNNNNCTT 2 cut(s) 2337, 2369
FaqI GGGAC 2 cut(s) 183, 804
FbaI TGATCA 2 cut(s) 258, 327
FblI GTMKAC 1 cut(s) 410
Fnu4HI GCNGC 9 cut(s) 309, 1008, 1547, 1724, 1769, 2610, 2634, 2795, 3035
FokI GGATG 8 cut(s) 759, 1286, 1769, 1955, 2122, 2354, 2413, 2872
FriOI GRGCYC 1 cut(s) 2969
Fsp4HI GCNGC 9 cut(s) 309, 1008, 1547, 1724, 1769, 2610, 2634, 2795, 3035
GlaI GCGC 1 cut(s) 1437
GluI GCNGC 9 cut(s) 309, 1008, 1547, 1724, 1769, 2610, 2634, 2795, 3035
HaeIII GGCC 4 cut(s) 1196, 2134, 2272, 3050
HapII CCGG 3 cut(s) 1741, 2190, 2840
HhaI GCGC 1 cut(s) 1438
Hin6I GCGC 1 cut(s) 1436
HinP1I GCGC 1 cut(s) 1436
HincII GTYRAC 5 cut(s) 411, 2024, 2304, 2727, 2854
HindII GTYRAC 5 cut(s) 411, 2024, 2304, 2727, 2854
HindIII AAGCTT 1 cut(s) 2327
HpaII CCGG 3 cut(s) 1741, 2190, 2840
HphI GGTGA 1 cut(s) 1373
Hpy166II GTNNAC 8 cut(s) 411, 632, 752, 2024, 2304, 2727, 2854, 3023
Hpy8I GTNNAC 8 cut(s) 411, 632, 752, 2024, 2304, 2727, 2854, 3023
Hpy99I CGWCG 5 cut(s) 783, 2502, 2554, 2909, 3056
HpyAV CCTTC 6 cut(s) 569, 1352, 1508, 2045, 2581, 2683
HpyCH4III ACNGT 7 cut(s) 391, 770, 1876, 2059, 2277, 2716, 2731
HpyCH4IV ACGT 2 cut(s) 270, 2549
HpyCH4V TGCA 9 cut(s) 131, 279, 1063, 1075, 1312, 1757, 2371, 2426, 2609
HpyF10VI GCNNNNNNNGC 3 cut(s) 1978, 2377, 2609
HpyF3I CTNAG 8 cut(s) 165, 1212, 1416, 1511, 1596, 2697, 2873, 3030
HpySE526I ACGT 2 cut(s) 270, 2549
HspAI GCGC 1 cut(s) 1436
KpnI GGTACC 1 cut(s) 2979
Ksp22I TGATCA 2 cut(s) 258, 327
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 2 cut(s) 1164, 2964
Lsp1109I GCAGC 5 cut(s) 320, 1755, 2621, 2806, 3021
LweI GCATC 6 cut(s) 859, 1791, 1831, 1981, 2380, 2435
MaeII ACGT 2 cut(s) 270, 2549
MaeIII GTNAC 8 cut(s) 225, 385, 457, 1032, 1361, 2202, 2819, 3004
MflI RGATCY 6 cut(s) 232, 497, 1884, 2450, 2704, 2941
MhlI GDGCHC 2 cut(s) 87, 2969
MlsI TGGCCA 2 cut(s) 1196, 2134
MluNI TGGCCA 2 cut(s) 1196, 2134
MlyI GAGTC 4 cut(s) 71, 564, 627, 3022
MmeI TCCRAC 2 cut(s) 871, 1782
Mox20I TGGCCA 2 cut(s) 1196, 2134
MroXI GAANNNNTTC 2 cut(s) 2037, 2121
MscI TGGCCA 2 cut(s) 1196, 2134
MslI CAYNNNNRTG 3 cut(s) 1076, 2243, 2604
Msp20I TGGCCA 2 cut(s) 1196, 2134
MspA1I CMGCKG 4 cut(s) 311, 2612, 2620, 3034
MspCI CTTAAG 3 cut(s) 1772, 2563, 2753
MspI CCGG 3 cut(s) 1741, 2190, 2840
MspR9I CCNGG 1 cut(s) 2841
MwoI GCNNNNNNNGC 3 cut(s) 1978, 2377, 2609
NciI CCSGG 1 cut(s) 2841
NheI GCTAGC 1 cut(s) 2956
NlaIV GGNNCC 5 cut(s) 171, 234, 1173, 1886, 2977
NmeAIII GCCGAG 1 cut(s) 2770
NmuCI GTSAC 2 cut(s) 1361, 3004
NspI RCATGY 2 cut(s) 579, 1075
NspV TTCGAA 1 cut(s) 943
PaeR7I CTCGAG 2 cut(s) 377, 493
PaqCI CACCTGC 1 cut(s) 1066
PciSI GCTCTTC 1 cut(s) 879
PdmI GAANNNNTTC 2 cut(s) 2037, 2121
PfeI GAWTC 9 cut(s) 812, 1082, 1300, 1994, 2038, 2389, 2413, 2693, 2928
PflMI CCANNNNNTGG 1 cut(s) 2193
PinAI ACCGGT 1 cut(s) 2189
PkrI GCNGC 9 cut(s) 310, 1009, 1548, 1725, 1770, 2611, 2635, 2796, 3036
PleI GAGTC 4 cut(s) 70, 563, 627, 3022
PpsI GAGTC 4 cut(s) 70, 563, 627, 3022
PshAI GACNNNNGTC 1 cut(s) 2986
PshBI ATTAAT 1 cut(s) 984
PsiI TTATAA 2 cut(s) 1338, 3000
Psp124BI GAGCTC 1 cut(s) 2969
PspN4I GGNNCC 5 cut(s) 171, 234, 1173, 1886, 2977
PspPI GGNCC 2 cut(s) 170, 1172
PsuI RGATCY 6 cut(s) 232, 497, 1884, 2450, 2704, 2941
PvuII CAGCTG 4 cut(s) 311, 2612, 2620, 3034
RsaI GTAC 8 cut(s) 650, 686, 760, 1070, 2006, 2096, 2163, 2977
RsaNI GTAC 8 cut(s) 649, 685, 759, 1069, 2005, 2095, 2162, 2976
RseI CAYNNNNRTG 3 cut(s) 1076, 2243, 2604
SacI GAGCTC 1 cut(s) 2969
SalI GTCGAC 1 cut(s) 409
SapI GCTCTTC 1 cut(s) 879
SatI GCNGC 9 cut(s) 309, 1008, 1547, 1724, 1769, 2610, 2634, 2795, 3035
Sau96I GGNCC 2 cut(s) 170, 1172
SchI GAGTC 4 cut(s) 71, 564, 627, 3022
ScrFI CCNGG 1 cut(s) 2841
SduI GDGCHC 2 cut(s) 87, 2969
SfaNI GCATC 6 cut(s) 859, 1791, 1831, 1981, 2380, 2435
SfcI CTRYAG 1 cut(s) 1983
Sfr274I CTCGAG 2 cut(s) 377, 493
SfuI TTCGAA 1 cut(s) 943
SinI GGWCC 2 cut(s) 170, 1172
SlaI CTCGAG 2 cut(s) 377, 493
SmiMI CAYNNNNRTG 3 cut(s) 1076, 2243, 2604
SmlI CTYRAG 7 cut(s) 377, 493, 1772, 1976, 2375, 2563, 2753
SmoI CTYRAG 7 cut(s) 377, 493, 1772, 1976, 2375, 2563, 2753
SpeI ACTAGT 1 cut(s) 2104
SsiI CCGC 9 cut(s) 1007, 1430, 1546, 1625, 1723, 1817, 1844, 2633, 2686
SstI GAGCTC 1 cut(s) 2969
StyD4I CCNGG 1 cut(s) 2839
TaaI ACNGT 7 cut(s) 391, 770, 1876, 2059, 2277, 2716, 2731
TaiI ACGT 2 cut(s) 273, 2552
TaqII GACCGA 2 cut(s) 1241, 2780
TatI WGTACW 2 cut(s) 648, 1068
TauI GCSGC 4 cut(s) 1010, 1549, 1726, 2636
TfiI GAWTC 9 cut(s) 812, 1082, 1300, 1994, 2038, 2389, 2413, 2693, 2928
TscAI CASTG 5 cut(s) 54, 2239, 2303, 2590, 2635
TseFI GTSAC 2 cut(s) 1361, 3004
TseI GCWGC 5 cut(s) 308, 1768, 2609, 2794, 3034
Tsp45I GTSAC 2 cut(s) 1361, 3004
TspDTI ATGAA 8 cut(s) 89, 387, 753, 804, 852, 1763, 2358, 2428
TspGWI ACGGA 2 cut(s) 1177, 2486
TspRI CASTG 5 cut(s) 54, 2239, 2303, 2590, 2635
Van91I CCANNNNNTGG 1 cut(s) 2193
Vha464I CTTAAG 3 cut(s) 1772, 2563, 2753
VpaK11BI GGWCC 2 cut(s) 170, 1172
VspI ATTAAT 1 cut(s) 984
XceI RCATGY 2 cut(s) 579, 1075
XhoI CTCGAG 2 cut(s) 377, 493
XmiI GTMKAC 1 cut(s) 410
XmnI GAANNNNTTC 2 cut(s) 2037, 2121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.