Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009717

Physical Location & Seq

Genomic Coordinates Reverse (-)

12459193 .. 12464718

Gene Structure 5526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00292050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGTACTCAAGGAAATTCTTGATCCTGAGGGACCAATCCTTGAAAAGTGGAATCTGATATTTGTAATATCATGTCTCTTTGCTGTGTTACTGGATCCTTTGTTCCTCTACACACCTCTAATCAACCAAGACATGAAGTGCATTGGACTAGACAAAAAGTTGAAGATAGCAGCTGTGGTTTTTCGATCGATCACAGATTTCGTTTATATAGTGAAAATCATTTTTCATGTTTATAAACTAGAAAAAGTTATGGCTCTATGGCAGTCATCCATCCTAGTTGACGTTTTAGCTGTTCTCCCTATTCCACAGGTAGTAATTCTCAATTTCTTTAGGGGCTCGAGATCTTTGGAAGCAATGAAGTTTATGAACTTGCTTGTTCTCGTCCAATACGTTCCACGAGTTCTGCGCATCTATCTCGCATGTAAGGAGTTCAAAAATTCTCCGAAAGGAAAGTTTGGATTATGGATAAAAGGTGGACTCAATTTCTTTATGTACACTCTTGCTAGTCATGTGGAATCAGCAAGTAAAGAGCAACTACGATGGAAGACAGAACTTGAAAATATGATGAGAACTGAAAGAAAGATGAGAATTGAACGGAGCAAGGGTCCGGAGGTAGAACAATGGCTAGCCAAAAATGGTCTCCCTATGCGTTTAATGCCCGAGATCATGGAAAAGGTAGTACAAGTGGATTTAGAACAAAACAGGGATGTTGATGTGGAGAATATCCTTTCGATTCTTCCCTTGCAACTTCAAAGGGATATTTTAGTTTATAAGGAGAAGTTGGAAGAGGAAGGTCGAAAGATAGAGTTGTGGTTATCTGAAAATCGCCTCCCAATGCGTTTAAAGTTGGAGATCATGGAAAAGGTGGTGCAACAAAAACGTGAAGAAAATAGGGATGTTCATGTGGATAATTTCCTATCTATTCTACCAGAGGAACGTCGGAGCTATATCGAAAGTTATAAACGGAAATTGCAAGAGAAAGACTTAGAAGTTGGCTCGTGGTTATCTAAAAATGGCATCCCCGTGGATACAAAGTCACAGATCATGGAGAAGGTTCAAGTAGAACTTGAAGAAAACAGGGATGTGGAAGTGAAGAATATCCTCTCCATTCTTCCTTCAGATCTCCAAAGACGTCTTGAATGGTATATGCCTTTGAGTAGGCTGAAGCGGGTGACATTGCTTGAAAGAATGGATGAAAGAGTGTTGAAAGCGATTTGTGAGAATCTTCAGCCTATAGAGTTTCCAGCCAAACTCGTCATTATGCAAGAGGGTCAACCAATTGAAGATCTGTTCTTCATTGTAGTCGGATCTGTACGACGGCATTCGAGAAATAGGCCGATGTTCCAGGAATACGAAACTGAAATATGCGGAGAAGAACTTCTGGTTTGGCCATTAACAACCTCCTTTCCTGCTGTATTACCCAGAGCAACCAAGACCGTTATGGTGGGTGAAGGTTTTAGTGCCCTTCTCCTTACGGCCAGTGATATAAAGAGTGTCGGCTCTAAATTCAGGCCACAGTGGGATCTCATTACTTCTTACTGGTTGACTATGCTAAAGAAAGTGCCAAAGCTTCAATATATGGATGAAGAAGTTTTGAAAGAATTCTTACCGCATCTTAACAAGCAGGATCAATTTGCAGCTAGATCCTCCTATGGTATTCAGGAGAATGTACCACTTAAATCCATGTACTTCATCACAGAGGGATCTCTAAAATTTACAAAAAGTGATAACGGTGATGAGGAGTTTTTTCGTTCTGCAGGGGAATTCTATGGAGAAGAACTCCTAGATTGGGTATTAGATACGTCCTTTCCTGCCATAACCCCCATTTCCACCCATTCTGCTCTTTGCAGCGATCACAATGAAGCTACCGTGTTGGCTATCACCGCCGAGGACTTAAAGAGTGTAGCTTCTAAATTCAGCTCGCACTTCAGCACCCTTCAAACGGATTCTCAATTTGATCTTTCAACTTTTGTCAACTTGACTAGGCTAAAGAAAGTTCCAAAACTTCAAACTATGGACGAAGAAGTTTTGAAAGCAATCTCTGAGCATCTTATAACCAAGGTGTTTAATTATCTGAAGATCATTGAAGAGGGAAAACCACTTCATATGATGTTATTCATTGTGAAGGGAAATGCATACCTAGAGAAGAAACATAGCACAGATAGAGTGATGCTAAAGCCTGGACAATTCTATGGAGAAGAACTACTAGATTGGCCATCATGGACCTCTTTTCCTACCATGCCCTTATCAATGTTCACTGTCAAAGTAGACCATGGAGAAGCTGTTGAATTCCTCGTTCTCATGGCCAACGATCTGGAGAAAGTAGTGTCTAAATTCAGGTCGCATTTCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

784

Amino Acids

91.14

Weight (kDa)

6.23

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009717)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20740 FvH4_7g20740 FvH4_7g20740
rosa_chinensis	RchiOBHm_Chr1g0364861 RchiOBHm_Chr1g0364961
rosa_laevigata	RLG00000027456
rosa_multiflora	Rmu_ssc0000112.1_g000024
rosa_roxburghii	Rroxscaffold_4G00291640 Rroxscaffold_4G00292050
rosa_rugosa	Rorug01G0318600 Rorug01G0318600 Rorug01G0318600
rosa_samantha	Rh1AG327500 Rh1BG288700 Rh1CG305400 Rh1DG320300
rosa_wichuraiana	Rw1G029020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	234, 771, 960, 2054
AatII	GACGTC	1 cut(s)	1135
Acc16I	TGCGCA	1 cut(s)	407
AccI	GTMKAC	1 cut(s)	2268
AccIII	TCCGGA	1 cut(s)	607
AciI	CCGC	4 cut(s)	1168, 1368, 1610, 1884
AclWI	GGATC	8 cut(s)	17, 89, 102, 1315, 1530, 1635, 1638, 1711
AcoI	YGGCCR	4 cut(s)	1388, 1476, 2213, 2304
AcsI	RAATTY	9 cut(s)	15, 436, 1505, 1601, 1712, 1763, 1913, 2288, 2333
AcuI	CTGAAG	5 cut(s)	1101, 1184, 1211, 1912, 2096
AcyI	GRCGYC	1 cut(s)	1132
AfaI	GTAC	6 cut(s)	6, 494, 681, 1314, 1671, 1688
AfiI	CCNNNNNNNGG	2 cut(s)	1789, 1942
AjnI	CCWGG	2 cut(s)	1344, 2179
AloI	GAACNNNNNNTCC	2 cut(s)	86, 118
Alw26I	GTCTC	2 cut(s)	80, 644
AlwI	GGATC	8 cut(s)	17, 89, 102, 1315, 1530, 1635, 1638, 1711
Ama87I	CYCGRG	2 cut(s)	337, 659
Aor13HI	TCCGGA	1 cut(s)	607
AoxI	GGCC	6 cut(s)	1334, 1388, 1476, 1511, 2213, 2304
ApeKI	GCWGC	3 cut(s)	170, 1637, 1848
ApoI	RAATTY	9 cut(s)	15, 436, 1505, 1601, 1712, 1763, 1913, 2288, 2333
Asp700I	GAANNNNTTC	2 cut(s)	1377, 1601
AspLEI	GCGC	1 cut(s)	408
AspS9I	GGNCC	3 cut(s)	32, 605, 2223
AsuHPI	GGTGA	4 cut(s)	1183, 1460, 1745, 1873
AsuNHI	GCTAGC	1 cut(s)	625
AvaI	CYCGRG	2 cut(s)	337, 659
AvaII	GGWCC	3 cut(s)	32, 605, 2223
AxyI	CCTNAGG	1 cut(s)	27
BaeGI	GKGCMC	1 cut(s)	1465
BalI	TGGCCA	3 cut(s)	1390, 2215, 2306
BamHI	GGATCC	1 cut(s)	94
BanII	GRGCYC	1 cut(s)	338
BauI	CACGAG	2 cut(s)	396, 997
BbsI	GAAGAC	1 cut(s)	551
BbvI	GCAGC	3 cut(s)	182, 1649, 1860
BccI	CCATC	3 cut(s)	278, 534, 2224
BceAI	ACGGC	2 cut(s)	1334, 1491
BcgI	CGANNNNNNTGC	2 cut(s)	397, 431
BciT130I	CCWGG	2 cut(s)	1346, 2181
BciVI	GTATCC	1 cut(s)	1021
BcoDI	GTCTC	2 cut(s)	80, 644
BfmI	CTRYAG	2 cut(s)	1233, 1755
BfuI	GTATCC	1 cut(s)	1021
BglII	AGATCT	3 cut(s)	341, 1120, 1285
BisI	GCNGC	3 cut(s)	171, 1638, 1849
BlsI	GCNGC	3 cut(s)	172, 1639, 1850
Bme1390I	CCNGG	2 cut(s)	1346, 2181
Bme18I	GGWCC	3 cut(s)	32, 605, 2223
BmeT110I	CYCGRG	2 cut(s)	337, 659
BmgT120I	GGNCC	3 cut(s)	32, 605, 2223
BmiI	GGNNCC	3 cut(s)	33, 96, 606
BmrFI	CCNGG	2 cut(s)	1346, 2181
BmsI	GCATC	5 cut(s)	417, 1026, 1621, 2056, 2160
BmtI	GCTAGC	1 cut(s)	629
BpiI	GAAGAC	1 cut(s)	551
BplI	GAGNNNNNCTC	2 cut(s)	1764, 1796
BpmI	CTGGAG	1 cut(s)	2336
Bsa29I	ATCGAT	1 cut(s)	188
BsaHI	GRCGYC	1 cut(s)	1132
BsaI	GGTCTC	1 cut(s)	644
BsaJI	CCNNGG	4 cut(s)	1023, 1887, 2058, 2272
BsaWI	WCCGGW	1 cut(s)	607
BsaXI	ACNNNNNCTCC	4 cut(s)	589, 619, 2268, 2298
Bsc4I	CCNNNNNNNGG	2 cut(s)	1789, 1942
Bse1I	ACTGG	3 cut(s)	96, 1479, 1544
Bse21I	CCTNAGG	1 cut(s)	27
Bse3DI	GCAATG	2 cut(s)	360, 1175
BseAI	TCCGGA	1 cut(s)	607
BseBI	CCWGG	2 cut(s)	1346, 2181
BseCI	ATCGAT	1 cut(s)	188
BseDI	CCNNGG	4 cut(s)	1023, 1887, 2058, 2272
BseGI	GGATG	8 cut(s)	266, 270, 712, 901, 1017, 1087, 1198, 1588
BseLI	CCNNNNNNNGG	2 cut(s)	1789, 1942
BseMI	GCAATG	2 cut(s)	360, 1175
BseMII	CTCAG	2 cut(s)	18, 2034
BseNI	ACTGG	3 cut(s)	96, 1479, 1544
BseRI	GAGGAG	1 cut(s)	1754
BseSI	GKGCMC	1 cut(s)	1465
BseXI	GCAGC	3 cut(s)	182, 1649, 1860
Bsh1285I	CGRYCG	1 cut(s)	188
BshFI	GGCC	6 cut(s)	1336, 1390, 1478, 1513, 2215, 2306
BshVI	ATCGAT	1 cut(s)	188
BsiEI	CGRYCG	1 cut(s)	188
BsiHKCI	CYCGRG	2 cut(s)	337, 659
BsiSI	CCGG	1 cut(s)	608
BslFI	GGGAC	1 cut(s)	45
BslI	CCNNNNNNNGG	2 cut(s)	1789, 1942
BsmAI	GTCTC	2 cut(s)	80, 644
BsmFI	GGGAC	1 cut(s)	45
BsmI	GAATGC	1 cut(s)	1321
BsnI	GGCC	6 cut(s)	1336, 1390, 1478, 1513, 2215, 2306
Bso31I	GGTCTC	1 cut(s)	644
BsoBI	CYCGRG	2 cut(s)	337, 659
Bsp1286I	GDGCHC	2 cut(s)	338, 1465
Bsp13I	TCCGGA	1 cut(s)	607
Bsp1407I	TGTACA	1 cut(s)	492
Bsp19I	CCATGG	1 cut(s)	2272
BspACI	CCGC	4 cut(s)	1168, 1368, 1610, 1884
BspANI	GGCC	6 cut(s)	1336, 1390, 1478, 1513, 2215, 2306
BspCNI	CTCAG	2 cut(s)	19, 2035
BspDI	ATCGAT	1 cut(s)	188
BspEI	TCCGGA	1 cut(s)	607
BspLI	GGNNCC	3 cut(s)	33, 96, 606
BspMAI	CTGCAG	1 cut(s)	1759
BspOI	GCTAGC	1 cut(s)	629
BspPI	GGATC	8 cut(s)	17, 89, 102, 1315, 1530, 1635, 1638, 1711
BspTNI	GGTCTC	1 cut(s)	644
BsrDI	GCAATG	2 cut(s)	360, 1175
BsrGI	TGTACA	1 cut(s)	492
BsrI	ACTGG	3 cut(s)	96, 1479, 1544
BssECI	CCNNGG	4 cut(s)	1023, 1887, 2058, 2272
BssNI	GRCGYC	1 cut(s)	1132
BssSI	CACGAG	2 cut(s)	396, 997
BssT1I	CCWWGG	2 cut(s)	2058, 2272
Bst2BI	CACGAG	2 cut(s)	396, 997
Bst2UI	CCWGG	2 cut(s)	1346, 2181
Bst4CI	ACNGT	5 cut(s)	1438, 1518, 1733, 1870, 2260
Bst6I	CTCTTC	2 cut(s)	780, 2082
BstACI	GRCGYC	1 cut(s)	1132
BstAUI	TGTACA	1 cut(s)	492
BstC8I	GCNNGC	2 cut(s)	627, 1922
BstDEI	CTNAG	3 cut(s)	27, 985, 2043
BstDSI	CCRYGG	2 cut(s)	1023, 2272
BstF5I	GGATG	8 cut(s)	266, 270, 712, 901, 1017, 1087, 1198, 1588
BstHHI	GCGC	1 cut(s)	408
BstMAI	GTCTC	2 cut(s)	80, 644
BstMCI	CGRYCG	1 cut(s)	188
BstMWI	GCNNNNNNNGC	2 cut(s)	655, 1883
BstNI	CCWGG	2 cut(s)	1346, 2181
BstNSI	RCATGY	1 cut(s)	423
BstSCI	CCNGG	2 cut(s)	1344, 2179
BstSFI	CTRYAG	2 cut(s)	1233, 1755
BstSLI	GKGCMC	1 cut(s)	1465
BstV1I	GCAGC	3 cut(s)	182, 1649, 1860
BstV2I	GAAGAC	1 cut(s)	551
BstX2I	RGATCY	8 cut(s)	94, 341, 1120, 1285, 1307, 1522, 1643, 1703
BstXI	CCANNNNNNTGG	1 cut(s)	2314
BstYI	RGATCY	8 cut(s)	94, 341, 1120, 1285, 1307, 1522, 1643, 1703
Bsu15I	ATCGAT	1 cut(s)	188
Bsu36I	CCTNAGG	1 cut(s)	27
BsuI	GTATCC	1 cut(s)	1021
BsuRI	GGCC	6 cut(s)	1336, 1390, 1478, 1513, 2215, 2306
BsuTUI	ATCGAT	1 cut(s)	188
BtgI	CCRYGG	2 cut(s)	1023, 2272
BtsCI	GGATG	8 cut(s)	266, 270, 712, 901, 1017, 1087, 1198, 1588
BtsIMutI	CAGTG	3 cut(s)	1486, 1523, 2256
Cac8I	GCNNGC	2 cut(s)	627, 1922
CfoI	GCGC	1 cut(s)	408
Cfr13I	GGNCC	3 cut(s)	32, 605, 2223
ClaI	ATCGAT	1 cut(s)	188
Csp6I	GTAC	6 cut(s)	5, 493, 680, 1313, 1670, 1687
CviQI	GTAC	6 cut(s)	5, 493, 680, 1313, 1670, 1687
DdeI	CTNAG	3 cut(s)	27, 985, 2043
DraI	TTTAAA	1 cut(s)	843
EaeI	YGGCCR	4 cut(s)	1388, 1476, 2213, 2304
Eam1104I	CTCTTC	2 cut(s)	780, 2082
EarI	CTCTTC	2 cut(s)	780, 2082
Eco130I	CCWWGG	2 cut(s)	2058, 2272
Eco24I	GRGCYC	1 cut(s)	338
Eco31I	GGTCTC	1 cut(s)	644
Eco47I	GGWCC	3 cut(s)	32, 605, 2223
Eco57I	CTGAAG	5 cut(s)	1101, 1184, 1211, 1912, 2096
Eco81I	CCTNAGG	1 cut(s)	27
Eco88I	CYCGRG	2 cut(s)	337, 659
EcoRI	GAATTC	3 cut(s)	1601, 1763, 2288
EcoRII	CCWGG	2 cut(s)	1344, 2179
EcoT14I	CCWWGG	2 cut(s)	2058, 2272
EcoT22I	ATGCAT	1 cut(s)	2137
EcoT38I	GRGCYC	1 cut(s)	338
ErhI	CCWWGG	2 cut(s)	2058, 2272
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	1 cut(s)	45
FauI	CCCGC	1 cut(s)	1161
FauNDI	CATATG	1 cut(s)	2106
FblI	GTMKAC	1 cut(s)	2268
Fnu4HI	GCNGC	3 cut(s)	171, 1638, 1849
FokI	GGATG	8 cut(s)	253, 257, 719, 908, 1004, 1094, 1205, 1595
FriOI	GRGCYC	1 cut(s)	338
Fsp4HI	GCNGC	3 cut(s)	171, 1638, 1849
FspI	TGCGCA	1 cut(s)	407
GlaI	GCGC	1 cut(s)	407
GluI	GCNGC	3 cut(s)	171, 1638, 1849
GsuI	CTGGAG	1 cut(s)	2336
HaeIII	GGCC	6 cut(s)	1336, 1390, 1478, 1513, 2215, 2306
HapII	CCGG	1 cut(s)	608
HhaI	GCGC	1 cut(s)	408
Hin1I	GRCGYC	1 cut(s)	1132
Hin6I	GCGC	1 cut(s)	406
HinP1I	GCGC	1 cut(s)	406
HincII	GTYRAC	4 cut(s)	280, 1274, 1545, 1975
HindII	GTYRAC	4 cut(s)	280, 1274, 1545, 1975
HindIII	AAGCTT	1 cut(s)	1568
HinfI	GANTC	6 cut(s)	52, 477, 515, 733, 1222, 1946
HpaII	CCGG	1 cut(s)	608
HphI	GGTGA	4 cut(s)	1183, 1460, 1745, 1873
Hpy166II	GTNNAC	8 cut(s)	280, 476, 495, 1274, 1545, 1975, 2256, 2269
Hpy188I	TCNGA	8 cut(s)	57, 444, 820, 942, 1120, 1307, 2044, 2076
Hpy188III	TCNNGA	8 cut(s)	20, 26, 339, 608, 1136, 1326, 1661, 2315
Hpy8I	GTNNAC	8 cut(s)	280, 476, 495, 1274, 1545, 1975, 2256, 2269
Hpy99I	CGWCG	2 cut(s)	942, 1320
HpyAV	CCTTC	7 cut(s)	785, 1045, 1125, 1445, 1475, 1946, 2119
HpyCH4III	ACNGT	5 cut(s)	1438, 1518, 1733, 1870, 2260
HpyCH4IV	ACGT	6 cut(s)	282, 390, 880, 937, 1132, 1802
HpyCH4V	TGCA	9 cut(s)	141, 745, 871, 973, 1264, 1637, 1757, 1848, 2135
HpyF10VI	GCNNNNNNNGC	2 cut(s)	655, 1883
HpyF3I	CTNAG	3 cut(s)	27, 985, 2043
HpySE526I	ACGT	6 cut(s)	282, 390, 880, 937, 1132, 1802
Hsp92I	GRCGYC	1 cut(s)	1132
HspAI	GCGC	1 cut(s)	406
Kpn2I	TCCGGA	1 cut(s)	607
LmnI	GCTCC	2 cut(s)	597, 942
Lsp1109I	GCAGC	3 cut(s)	182, 1649, 1860
LweI	GCATC	5 cut(s)	417, 1026, 1621, 2056, 2160
MaeII	ACGT	6 cut(s)	282, 390, 880, 937, 1132, 1802
MaeIII	GTNAC	3 cut(s)	87, 1035, 1171
MfeI	CAATTG	1 cut(s)	1278
MflI	RGATCY	8 cut(s)	94, 341, 1120, 1285, 1307, 1522, 1643, 1703
MhlI	GDGCHC	2 cut(s)	338, 1465
MlsI	TGGCCA	3 cut(s)	1390, 2215, 2306
MluNI	TGGCCA	3 cut(s)	1390, 2215, 2306
MlyI	GAGTC	1 cut(s)	471
MmeI	TCCRAC	4 cut(s)	762, 828, 920, 1285
Mox20I	TGGCCA	3 cut(s)	1390, 2215, 2306
Mph1103I	ATGCAT	1 cut(s)	2137
MroI	TCCGGA	1 cut(s)	607
MroXI	GAANNNNTTC	2 cut(s)	1377, 1601
MscI	TGGCCA	3 cut(s)	1390, 2215, 2306
MseI	TTAA	7 cut(s)	653, 842, 1394, 1617, 1677, 1895, 2067
MslI	CAYNNNNRTG	1 cut(s)	1022
Msp20I	TGGCCA	3 cut(s)	1390, 2215, 2306
MspA1I	CMGCKG	1 cut(s)	173
MspI	CCGG	1 cut(s)	608
MspR9I	CCNGG	2 cut(s)	1346, 2181
MunI	CAATTG	1 cut(s)	1278
Mva1269I	GAATGC	1 cut(s)	1321
MvaI	CCWGG	2 cut(s)	1346, 2181
MwoI	GCNNNNNNNGC	2 cut(s)	655, 1883
NcoI	CCATGG	1 cut(s)	2272
NdeI	CATATG	1 cut(s)	2106
NheI	GCTAGC	1 cut(s)	625
NlaIV	GGNNCC	3 cut(s)	33, 96, 606
NmeAIII	GCCGAG	1 cut(s)	1912
NmuCI	GTSAC	2 cut(s)	1035, 1171
NsbI	TGCGCA	1 cut(s)	407
NsiI	ATGCAT	1 cut(s)	2137
NspI	RCATGY	1 cut(s)	423
PaeR7I	CTCGAG	1 cut(s)	337
PcsI	WCGNNNNNNNCGW	1 cut(s)	387
PctI	GAATGC	1 cut(s)	1321
PdmI	GAANNNNTTC	2 cut(s)	1377, 1601
PfeI	GAWTC	5 cut(s)	52, 515, 733, 1222, 1946
PfoI	TCCNGGA	1 cut(s)	1344
PkrI	GCNGC	3 cut(s)	172, 1639, 1850
Ple19I	CGATCG	1 cut(s)	188
PleI	GAGTC	1 cut(s)	471
PpsI	GAGTC	1 cut(s)	471
PsiI	TTATAA	4 cut(s)	234, 771, 960, 2054
Psp6I	CCWGG	2 cut(s)	1344, 2179
PspGI	CCWGG	2 cut(s)	1344, 2179
PspN4I	GGNNCC	3 cut(s)	33, 96, 606
PspPI	GGNCC	3 cut(s)	32, 605, 2223
PstI	CTGCAG	1 cut(s)	1759
PsuI	RGATCY	8 cut(s)	94, 341, 1120, 1285, 1307, 1522, 1643, 1703
PvuI	CGATCG	1 cut(s)	188
PvuII	CAGCTG	1 cut(s)	173
RsaI	GTAC	6 cut(s)	6, 494, 681, 1314, 1671, 1688
RsaNI	GTAC	6 cut(s)	5, 493, 680, 1313, 1670, 1687
RseI	CAYNNNNRTG	1 cut(s)	1022
SaqAI	TTAA	7 cut(s)	653, 842, 1394, 1617, 1677, 1895, 2067
SatI	GCNGC	3 cut(s)	171, 1638, 1849
Sau96I	GGNCC	3 cut(s)	32, 605, 2223
SchI	GAGTC	1 cut(s)	471
ScrFI	CCNGG	2 cut(s)	1346, 2181
SduI	GDGCHC	2 cut(s)	338, 1465
SfaNI	GCATC	5 cut(s)	417, 1026, 1621, 2056, 2160
SfcI	CTRYAG	2 cut(s)	1233, 1755
Sfr274I	CTCGAG	1 cut(s)	337
SinI	GGWCC	3 cut(s)	32, 605, 2223
SlaI	CTCGAG	1 cut(s)	337
SmiMI	CAYNNNNRTG	1 cut(s)	1022
SmlI	CTYRAG	2 cut(s)	8, 337
SmoI	CTYRAG	2 cut(s)	8, 337
SsiI	CCGC	4 cut(s)	1168, 1368, 1610, 1884
StyD4I	CCNGG	2 cut(s)	1344, 2179
StyI	CCWWGG	2 cut(s)	2058, 2272
TaaI	ACNGT	5 cut(s)	1438, 1518, 1733, 1870, 2260
TaiI	ACGT	6 cut(s)	285, 393, 883, 940, 1135, 1805
TaqI	TCGA	7 cut(s)	184, 188, 338, 731, 796, 951, 1325
TatI	WGTACW	3 cut(s)	492, 679, 1686
TfiI	GAWTC	5 cut(s)	52, 515, 733, 1222, 1946
Tru1I	TTAA	7 cut(s)	653, 842, 1394, 1617, 1677, 1895, 2067
Tru9I	TTAA	7 cut(s)	653, 842, 1394, 1617, 1677, 1895, 2067
TscAI	CASTG	3 cut(s)	1486, 1523, 2263
TseFI	GTSAC	2 cut(s)	1035, 1171
TseI	GCWGC	3 cut(s)	170, 1637, 1848
Tsp45I	GTSAC	2 cut(s)	1035, 1171
TspGWI	ACGGA	3 cut(s)	610, 979, 1958
TspRI	CASTG	3 cut(s)	1486, 1523, 2263
VpaK11BI	GGWCC	3 cut(s)	32, 605, 2223
XapI	RAATTY	9 cut(s)	15, 436, 1505, 1601, 1712, 1763, 1913, 2288, 2333
XceI	RCATGY	1 cut(s)	423
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1438
XhoI	CTCGAG	1 cut(s)	337
XmiI	GTMKAC	1 cut(s)	2268
XmnI	GAANNNNTTC	2 cut(s)	1377, 1601
ZraI	GACGTC	1 cut(s)	1133
Zsp2I	ATGCAT	1 cut(s)	2137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.