Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20740 FvH4_7g20740 FvH4_7g20740 |
| rosa_chinensis | RchiOBHm_Chr1g0364861 RchiOBHm_Chr1g0364961 |
| rosa_laevigata | RLG00000027456 |
| rosa_multiflora | Rmu_ssc0000112.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00291640 Rroxscaffold_4G00292050 |
| rosa_rugosa | Rorug01G0318600 Rorug01G0318600 Rorug01G0318600 |
| rosa_samantha | Rh1AG327500 Rh1BG288700 Rh1CG305400 Rh1DG320300 |
| rosa_wichuraiana | Rw1G029020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 234, 897, 1086 |
| Acc16I | TGCGCA | 1 cut(s) | 413 |
| AccI | GTMKAC | 2 cut(s) | 601, 790 |
| AciI | CCGC | 2 cut(s) | 1314, 1830 |
| AclWI | GGATC | 9 cut(s) | 17, 89, 102, 751, 1261, 1476, 1581, 1584, 1657 |
| AcoI | YGGCCR | 2 cut(s) | 1334, 1422 |
| AcsI | RAATTY | 8 cut(s) | 15, 442, 804, 1451, 1547, 1658, 1709, 1859 |
| AcuI | CTGAAG | 2 cut(s) | 1157, 1858 |
| AfaI | GTAC | 8 cut(s) | 6, 500, 536, 610, 1260, 1617, 1634, 1879 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1735 |
| AjnI | CCWGG | 1 cut(s) | 1290 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 86, 118 |
| AluBI | AGCT | 9 cut(s) | 173, 296, 817, 1071, 1516, 1586, 1811, 1853, 1866 |
| AluI | AGCT | 9 cut(s) | 173, 296, 817, 1071, 1516, 1586, 1811, 1853, 1866 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| AlwI | GGATC | 9 cut(s) | 17, 89, 102, 751, 1261, 1476, 1581, 1584, 1657 |
| Ama87I | CYCGRG | 1 cut(s) | 343 |
| AoxI | GGCC | 4 cut(s) | 1280, 1334, 1422, 1457 |
| ApeKI | GCWGC | 3 cut(s) | 170, 1583, 1794 |
| ApoI | RAATTY | 8 cut(s) | 15, 442, 804, 1451, 1547, 1658, 1709, 1859 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1323, 1547 |
| AspLEI | GCGC | 1 cut(s) | 414 |
| AspS9I | GGNCC | 1 cut(s) | 32 |
| AsuHPI | GGTGA | 3 cut(s) | 1406, 1691, 1819 |
| AvaI | CYCGRG | 1 cut(s) | 343 |
| AvaII | GGWCC | 1 cut(s) | 32 |
| AxyI | CCTNAGG | 1 cut(s) | 27 |
| BaeGI | GKGCMC | 1 cut(s) | 1411 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1861, 1894 |
| BalI | TGGCCA | 1 cut(s) | 1336 |
| BamHI | GGATCC | 1 cut(s) | 94 |
| BanII | GRGCYC | 1 cut(s) | 344 |
| BauI | CACGAG | 2 cut(s) | 402, 1100 |
| BbvCI | CCTCAGC | 1 cut(s) | 1833 |
| BbvI | GCAGC | 3 cut(s) | 182, 1595, 1806 |
| BccI | CCATC | 3 cut(s) | 284, 587, 688 |
| BceAI | ACGGC | 3 cut(s) | 1280, 1343, 1437 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 403, 437, 697, 731 |
| BciT130I | CCWGG | 1 cut(s) | 1292 |
| BclI | TGATCA | 1 cut(s) | 625 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfaI | CTAG | 9 cut(s) | 149, 239, 281, 380, 510, 606, 1587, 1929, 1951 |
| BfmI | CTRYAG | 2 cut(s) | 1179, 1701 |
| BglII | AGATCT | 2 cut(s) | 347, 1903 |
| BisI | GCNGC | 3 cut(s) | 171, 1584, 1795 |
| BlsI | GCNGC | 3 cut(s) | 172, 1585, 1796 |
| BmcAI | AGTACT | 1 cut(s) | 610 |
| Bme1390I | CCNGG | 1 cut(s) | 1292 |
| Bme18I | GGWCC | 1 cut(s) | 32 |
| BmeT110I | CYCGRG | 1 cut(s) | 343 |
| BmgT120I | GGNCC | 1 cut(s) | 32 |
| BmiI | GGNNCC | 3 cut(s) | 33, 96, 526 |
| BmrFI | CCNGG | 1 cut(s) | 1292 |
| BmsI | GCATC | 2 cut(s) | 423, 709 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1710, 1742 |
| Bpu10I | CCTNAGC | 2 cut(s) | 821, 1833 |
| Bsa29I | ATCGAT | 1 cut(s) | 188 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1735 |
| Bse1I | ACTGG | 3 cut(s) | 96, 1425, 1490 |
| Bse21I | CCTNAGG | 1 cut(s) | 27 |
| Bse3DI | GCAATG | 2 cut(s) | 366, 1121 |
| BseBI | CCWGG | 1 cut(s) | 1292 |
| BseCI | ATCGAT | 1 cut(s) | 188 |
| BseGI | GGATG | 6 cut(s) | 272, 276, 602, 1027, 1144, 1534 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1735 |
| BseMI | GCAATG | 2 cut(s) | 366, 1121 |
| BseMII | CTCAG | 3 cut(s) | 18, 791, 1824 |
| BseNI | ACTGG | 3 cut(s) | 96, 1425, 1490 |
| BseRI | GAGGAG | 2 cut(s) | 105, 1700 |
| BseSI | GKGCMC | 1 cut(s) | 1411 |
| BseXI | GCAGC | 3 cut(s) | 182, 1595, 1806 |
| Bsh1285I | CGRYCG | 1 cut(s) | 188 |
| BshFI | GGCC | 4 cut(s) | 1282, 1336, 1424, 1459 |
| BshVI | ATCGAT | 1 cut(s) | 188 |
| BsiEI | CGRYCG | 1 cut(s) | 188 |
| BsiHKCI | CYCGRG | 1 cut(s) | 343 |
| BslFI | GGGAC | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1735 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsmFI | GGGAC | 1 cut(s) | 45 |
| BsmI | GAATGC | 1 cut(s) | 1267 |
| BsnI | GGCC | 4 cut(s) | 1282, 1336, 1424, 1459 |
| BsoBI | CYCGRG | 1 cut(s) | 343 |
| Bsp1286I | GDGCHC | 2 cut(s) | 344, 1411 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| BspACI | CCGC | 2 cut(s) | 1314, 1830 |
| BspANI | GGCC | 4 cut(s) | 1282, 1336, 1424, 1459 |
| BspCNI | CTCAG | 3 cut(s) | 19, 792, 1825 |
| BspDI | ATCGAT | 1 cut(s) | 188 |
| BspHI | TCATGA | 1 cut(s) | 622 |
| BspLI | GGNNCC | 3 cut(s) | 33, 96, 526 |
| BspMAI | CTGCAG | 1 cut(s) | 1705 |
| BspPI | GGATC | 9 cut(s) | 17, 89, 102, 751, 1261, 1476, 1581, 1584, 1657 |
| BspQI | GCTCTTC | 1 cut(s) | 729 |
| BsrDI | GCAATG | 2 cut(s) | 366, 1121 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BsrI | ACTGG | 3 cut(s) | 96, 1425, 1490 |
| BssSI | CACGAG | 2 cut(s) | 402, 1100 |
| Bst2BI | CACGAG | 2 cut(s) | 402, 1100 |
| Bst2UI | CCWGG | 1 cut(s) | 1292 |
| Bst4CI | ACNGT | 6 cut(s) | 253, 620, 1236, 1384, 1464, 1679 |
| Bst6I | CTCTTC | 2 cut(s) | 729, 906 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstC8I | GCNNGC | 2 cut(s) | 569, 1868 |
| BstDEI | CTNAG | 5 cut(s) | 27, 800, 821, 1111, 1833 |
| BstF5I | GGATG | 6 cut(s) | 272, 276, 602, 1027, 1144, 1534 |
| BstHHI | GCGC | 1 cut(s) | 414 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstMCI | CGRYCG | 1 cut(s) | 188 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1829 |
| BstNI | CCWGG | 1 cut(s) | 1292 |
| BstNSI | RCATGY | 2 cut(s) | 429, 567 |
| BstSCI | CCNGG | 1 cut(s) | 1290 |
| BstSFI | CTRYAG | 2 cut(s) | 1179, 1701 |
| BstSLI | GKGCMC | 1 cut(s) | 1411 |
| BstV1I | GCAGC | 3 cut(s) | 182, 1595, 1806 |
| BstX2I | RGATCY | 6 cut(s) | 94, 347, 1253, 1589, 1649, 1903 |
| BstYI | RGATCY | 6 cut(s) | 94, 347, 1253, 1589, 1649, 1903 |
| Bsu15I | ATCGAT | 1 cut(s) | 188 |
| Bsu36I | CCTNAGG | 1 cut(s) | 27 |
| BsuRI | GGCC | 4 cut(s) | 1282, 1336, 1424, 1459 |
| BsuTUI | ATCGAT | 1 cut(s) | 188 |
| BtsCI | GGATG | 6 cut(s) | 272, 276, 602, 1027, 1144, 1534 |
| BtsIMutI | CAGTG | 2 cut(s) | 1432, 1469 |
| Cac8I | GCNNGC | 2 cut(s) | 569, 1868 |
| CciI | TCATGA | 1 cut(s) | 622 |
| CfoI | GCGC | 1 cut(s) | 414 |
| Cfr13I | GGNCC | 1 cut(s) | 32 |
| ClaI | ATCGAT | 1 cut(s) | 188 |
| Csp6I | GTAC | 8 cut(s) | 5, 499, 535, 609, 1259, 1616, 1633, 1878 |
| CviQI | GTAC | 8 cut(s) | 5, 499, 535, 609, 1259, 1616, 1633, 1878 |
| DdeI | CTNAG | 5 cut(s) | 27, 800, 821, 1111, 1833 |
| DraI | TTTAAA | 1 cut(s) | 969 |
| EaeI | YGGCCR | 2 cut(s) | 1334, 1422 |
| Eam1104I | CTCTTC | 2 cut(s) | 729, 906 |
| EarI | CTCTTC | 2 cut(s) | 729, 906 |
| Eco24I | GRGCYC | 1 cut(s) | 344 |
| Eco47I | GGWCC | 1 cut(s) | 32 |
| Eco57I | CTGAAG | 2 cut(s) | 1157, 1858 |
| Eco81I | CCTNAGG | 1 cut(s) | 27 |
| Eco88I | CYCGRG | 1 cut(s) | 343 |
| EcoRI | GAATTC | 2 cut(s) | 1547, 1709 |
| EcoRII | CCWGG | 1 cut(s) | 1290 |
| EcoT38I | GRGCYC | 1 cut(s) | 344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1713, 1745 |
| FaqI | GGGAC | 1 cut(s) | 45 |
| FbaI | TGATCA | 1 cut(s) | 625 |
| FblI | GTMKAC | 2 cut(s) | 601, 790 |
| Fnu4HI | GCNGC | 3 cut(s) | 171, 1584, 1795 |
| FokI | GGATG | 6 cut(s) | 259, 263, 609, 1034, 1151, 1541 |
| FriOI | GRGCYC | 1 cut(s) | 344 |
| Fsp4HI | GCNGC | 3 cut(s) | 171, 1584, 1795 |
| FspBI | CTAG | 9 cut(s) | 149, 239, 281, 380, 510, 606, 1587, 1929, 1951 |
| FspI | TGCGCA | 1 cut(s) | 413 |
| GlaI | GCGC | 1 cut(s) | 413 |
| GluI | GCNGC | 3 cut(s) | 171, 1584, 1795 |
| HaeIII | GGCC | 4 cut(s) | 1282, 1336, 1424, 1459 |
| HhaI | GCGC | 1 cut(s) | 414 |
| Hin6I | GCGC | 1 cut(s) | 412 |
| HinP1I | GCGC | 1 cut(s) | 412 |
| HincII | GTYRAC | 5 cut(s) | 286, 561, 1220, 1491, 1921 |
| HindII | GTYRAC | 5 cut(s) | 286, 561, 1220, 1491, 1921 |
| HindIII | AAGCTT | 1 cut(s) | 1514 |
| HinfI | GANTC | 6 cut(s) | 52, 483, 686, 859, 1168, 1892 |
| HphI | GGTGA | 3 cut(s) | 1406, 1691, 1819 |
| Hpy166II | GTNNAC | 9 cut(s) | 286, 482, 501, 561, 602, 791, 1220, 1491, 1921 |
| Hpy188I | TCNGA | 7 cut(s) | 57, 650, 685, 946, 976, 1068, 1253 |
| Hpy188III | TCNNGA | 6 cut(s) | 20, 26, 345, 623, 716, 1272 |
| Hpy8I | GTNNAC | 9 cut(s) | 286, 482, 501, 561, 602, 791, 1220, 1491, 1921 |
| Hpy99I | CGWCG | 2 cut(s) | 1068, 1266 |
| HpyAV | CCTTC | 6 cut(s) | 50, 911, 1208, 1391, 1421, 1892 |
| HpyCH4III | ACNGT | 6 cut(s) | 253, 620, 1236, 1384, 1464, 1679 |
| HpyCH4IV | ACGT | 4 cut(s) | 288, 396, 1063, 1748 |
| HpyCH4V | TGCA | 8 cut(s) | 141, 871, 997, 1099, 1210, 1583, 1703, 1794 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1829 |
| HpyF3I | CTNAG | 5 cut(s) | 27, 800, 821, 1111, 1833 |
| HpySE526I | ACGT | 4 cut(s) | 288, 396, 1063, 1748 |
| HspAI | GCGC | 1 cut(s) | 412 |
| Ksp22I | TGATCA | 1 cut(s) | 625 |
| LguI | GCTCTTC | 1 cut(s) | 729 |
| LmnI | GCTCC | 3 cut(s) | 524, 822, 1068 |
| Lsp1109I | GCAGC | 3 cut(s) | 182, 1595, 1806 |
| LweI | GCATC | 2 cut(s) | 423, 709 |
| MaeI | CTAG | 9 cut(s) | 149, 239, 281, 380, 510, 606, 1587, 1929, 1951 |
| MaeII | ACGT | 4 cut(s) | 288, 396, 1063, 1748 |
| MaeIII | GTNAC | 3 cut(s) | 87, 247, 1117 |
| MfeI | CAATTG | 1 cut(s) | 1224 |
| MflI | RGATCY | 6 cut(s) | 94, 347, 1253, 1589, 1649, 1903 |
| MhlI | GDGCHC | 2 cut(s) | 344, 1411 |
| MlsI | TGGCCA | 1 cut(s) | 1336 |
| MluNI | TGGCCA | 1 cut(s) | 1336 |
| MlyI | GAGTC | 1 cut(s) | 477 |
| MmeI | TCCRAC | 5 cut(s) | 721, 888, 954, 1046, 1231 |
| Mox20I | TGGCCA | 1 cut(s) | 1336 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1323, 1547 |
| MscI | TGGCCA | 1 cut(s) | 1336 |
| MseI | TTAA | 7 cut(s) | 812, 968, 1026, 1340, 1563, 1623, 1841 |
| Msp20I | TGGCCA | 1 cut(s) | 1336 |
| MspA1I | CMGCKG | 2 cut(s) | 173, 1832 |
| MspR9I | CCNGG | 1 cut(s) | 1292 |
| MunI | CAATTG | 1 cut(s) | 1224 |
| Mva1269I | GAATGC | 1 cut(s) | 1267 |
| MvaI | CCWGG | 1 cut(s) | 1292 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1829 |
| NlaIV | GGNNCC | 3 cut(s) | 33, 96, 526 |
| NmuCI | GTSAC | 1 cut(s) | 1117 |
| NsbI | TGCGCA | 1 cut(s) | 413 |
| NspI | RCATGY | 2 cut(s) | 429, 567 |
| PaeR7I | CTCGAG | 1 cut(s) | 343 |
| PagI | TCATGA | 1 cut(s) | 622 |
| PciSI | GCTCTTC | 1 cut(s) | 729 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 393 |
| PctI | GAATGC | 1 cut(s) | 1267 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1323, 1547 |
| PfeI | GAWTC | 5 cut(s) | 52, 686, 859, 1168, 1892 |
| PfoI | TCCNGGA | 1 cut(s) | 1290 |
| PkrI | GCNGC | 3 cut(s) | 172, 1585, 1796 |
| Ple19I | CGATCG | 1 cut(s) | 188 |
| PleI | GAGTC | 1 cut(s) | 477 |
| PpsI | GAGTC | 1 cut(s) | 477 |
| PsiI | TTATAA | 3 cut(s) | 234, 897, 1086 |
| Psp6I | CCWGG | 1 cut(s) | 1290 |
| PspGI | CCWGG | 1 cut(s) | 1290 |
| PspN4I | GGNNCC | 3 cut(s) | 33, 96, 526 |
| PspPI | GGNCC | 1 cut(s) | 32 |
| PstI | CTGCAG | 1 cut(s) | 1705 |
| PsuI | RGATCY | 6 cut(s) | 94, 347, 1253, 1589, 1649, 1903 |
| PvuI | CGATCG | 1 cut(s) | 188 |
| PvuII | CAGCTG | 1 cut(s) | 173 |
| RsaI | GTAC | 8 cut(s) | 6, 500, 536, 610, 1260, 1617, 1634, 1879 |
| RsaNI | GTAC | 8 cut(s) | 5, 499, 535, 609, 1259, 1616, 1633, 1878 |
| SapI | GCTCTTC | 1 cut(s) | 729 |
| SaqAI | TTAA | 7 cut(s) | 812, 968, 1026, 1340, 1563, 1623, 1841 |
| SatI | GCNGC | 3 cut(s) | 171, 1584, 1795 |
| Sau96I | GGNCC | 1 cut(s) | 32 |
| ScaI | AGTACT | 1 cut(s) | 610 |
| SchI | GAGTC | 1 cut(s) | 477 |
| ScrFI | CCNGG | 1 cut(s) | 1292 |
| SduI | GDGCHC | 2 cut(s) | 344, 1411 |
| SfaNI | GCATC | 2 cut(s) | 423, 709 |
| SfcI | CTRYAG | 2 cut(s) | 1179, 1701 |
| Sfr274I | CTCGAG | 1 cut(s) | 343 |
| SinI | GGWCC | 1 cut(s) | 32 |
| SlaI | CTCGAG | 1 cut(s) | 343 |
| SmlI | CTYRAG | 2 cut(s) | 8, 343 |
| SmoI | CTYRAG | 2 cut(s) | 8, 343 |
| SsiI | CCGC | 2 cut(s) | 1314, 1830 |
| SspMI | CTAG | 9 cut(s) | 149, 239, 281, 380, 510, 606, 1587, 1929, 1951 |
| StyD4I | CCNGG | 1 cut(s) | 1290 |
| TaaI | ACNGT | 6 cut(s) | 253, 620, 1236, 1384, 1464, 1679 |
| TaiI | ACGT | 4 cut(s) | 291, 399, 1066, 1751 |
| TaqI | TCGA | 9 cut(s) | 184, 188, 344, 583, 717, 770, 857, 922, 1077 |
| TatI | WGTACW | 3 cut(s) | 498, 608, 1632 |
| TfiI | GAWTC | 5 cut(s) | 52, 686, 859, 1168, 1892 |
| Tru1I | TTAA | 7 cut(s) | 812, 968, 1026, 1340, 1563, 1623, 1841 |
| Tru9I | TTAA | 7 cut(s) | 812, 968, 1026, 1340, 1563, 1623, 1841 |
| TscAI | CASTG | 2 cut(s) | 1432, 1469 |
| TseFI | GTSAC | 1 cut(s) | 1117 |
| TseI | GCWGC | 3 cut(s) | 170, 1583, 1794 |
| Tsp45I | GTSAC | 1 cut(s) | 1117 |
| TspRI | CASTG | 2 cut(s) | 1432, 1469 |
| VpaK11BI | GGWCC | 1 cut(s) | 32 |
| XapI | RAATTY | 8 cut(s) | 15, 442, 804, 1451, 1547, 1658, 1709, 1859 |
| XceI | RCATGY | 2 cut(s) | 429, 567 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1384 |
| XhoI | CTCGAG | 1 cut(s) | 343 |
| XmiI | GTMKAC | 2 cut(s) | 601, 790 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1323, 1547 |
| XspI | CTAG | 9 cut(s) | 149, 239, 281, 380, 510, 606, 1587, 1929, 1951 |
| ZrmI | AGTACT | 1 cut(s) | 610 |