RchiOBHm_Chr1g0364961

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0009717
Physical Location & Seq
Forward (+)
56014386 .. 56018484
4099 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58963

Sequence Viewer

Length: 2541 bp
ATGTTTGTTTTGCCAGTAACAGTTATGGCTCTATGGCAGTCATCCATCCTAGTTGACGTTTTAGCTGTTCTCCCTATTCCACAAGTAGTAATTCTCAATTTCTTTAGGGGCTCGAGATCTTTGGAAGCAATGAAGTTTATGAACTTTCTAGTTCTCGTCCAATACGTTCCACGAGTTCTGCGCATCTATCTCGCATGTAAGGAGTTCAAAAATTCTCCAAAAGGAAAGTTTGGATTATGGATAAAAGGTGGACTCAATTTCTTTATGTACACTCTTGCTAGTCATATATTTGGAGCCTTTTGGTACTTTTTCTCTATTCAACGAATGTTGACATGCTGGCGATATGCTTGTCGAAGTGAAGATGGATGTAAACCTAGTACTTTTGACTGTCATGATCATCGTAGCAACAGATATATCAGATTGCTAAATGATAAATGTCCTACAAATCCATCGGATTCAACGCTCTTTGATTTTGGCATATTTCTCGATGCTCTTCAATCAAGTATAGTTGGATCAAAAAATTATTCACAAAAGTTGTCGAAATGTTTTTGGTGGGGTCTACGAAATCTGAGTTCTCTCGGTTCAAACCTCCAACCTAGTATCAATACATGGGAGACCCTCTTCGCGACATTTACTTCTATTACTGGCTTGCTACTGTTTTTATACCTAATTGGAAATCTACAGATGTATATGCAGGTGGAATCAGCAAGTAAAGAGCAACTACGATGGAAGACAGAACTTGAAAATATGATGAGAACTGAAAGAAAGATGAGAATTGAACGGAGCAAGGGTCTGGAGGTAGAACAATGGCTAGCCAAAAATGGTCTCCCTATGCGTTTAATGCCCGAGATCATGGAAAAGGTAGTACAAGTGGATTTAGAACAAAACAGGGATGTTGATGTGGAGAATATCCTTTCGATTCTTCCCTTGCAACTTCAAAGGGATATTTTAGTTTATAAGGAGAAGTTGGAAGAGGAAGGTCGAAAGATAGAGTTGTGGTTATCTGAAAATCGCCTCCCAATGCGTTTAAAGTCGGAGATCATGGAAAAGGTGGTGCAACAAAAACGTGACGAAAATAGGGATGTTCATGTGGATAATTTCCTATCTATTCTACCAGAGGAACGTCGGAGCTATATCGAAAGTTACAAACGGAAATTGCAAGAGAAAGACTTAGAAGTTGGCTCGTGGTTATCTAAAAATGGCATCCCCGTGGATACAAAGTCACAGATCATGGAGAAGGTTCAAGTAGAACTTGAAGAAAACAGGGATGTGGAAGTGAAGAATATCCTCTCCATTCTTCCTTCAGATCTCCAAAGACGTCTTGAATGGTATATGCCTTTGAGTAGGCTGAAGCGGGTGACATTGCTTGAAAGAATGGATGAAAGAGTGTTGAAAGCGATTTGTGAGAATCTTCAGCCTATAGAGTTTCCAGCCAAACTCGTCATTATGCAAGAGGATCAACCAATTGAAGATCTGTTCTTCATTGTAGTCGGATCTGTACGACGGCATTCGAGAAATAGGCCGATGTTCCAGGAATACGAAACTGAATTATGCGGAGAAGAACTTCTGGTTTGGCCATTAACAACCTCCTTTCCTGCCGTATTACCCAGAGCAACCAAGACCGTTATGGTGGGTGAAGGTTTTAGTGCCCTTCTCCTTACGGCCAGTGATATAAAGAGTGTCGGCTCTAAATTCAGACCACAGTGGGATCTCATTACTTCTTACTGGTTGACTATGCTAAAGAAAGTGCCAAAGCTTCAATATATGGATGAAGAAGTTTTGAAAGAATTCTTACCGCATCTTAACAAGCAGGATCAATTTGCAGCTAGATCCTCCTATGGTATTCAGGAGAATGTACCACTTAAATCCATGTACTTCATCACAGAGGGATCTCTAAAATTTACAAAAAGTGATAACGGTGATGAGGAGTTTTTTCGTTCTGCAGGGGAATTCTATGGAGAAGAACTCCTAGATTGGGTATTAGATACGTCCTTTCCTGCCATAACCCCCATTTCCACCCATTCTGCTCTTTGTAGCGATCACAATGAAGCTACTGTGTTGGCTATCACCGCCGAGGACTTAAAGAGTGTAGCTTCTAAATTCAGCTCGCACTTCAGCACCCTTCAAACGGATTCTCAATTTGATCTTTCAACTTTTGTCAACTTGACTAGGCTAAAGAAAGTGCCAAAACTTCAAACTATGGACGAAGAAGTTTTGAAAGCAATCTCTGAGCATCTTATAACCAAGGTGTTTAATTATCTGAAGATCATTGAAGAGGGAAAACCACTTCATATGATGTTATTCATTGTGAAGGGAAATGCATACCTAGAGAAGAAACATAGCACAGATACAGTGATGCTAAAGCCTGGACAATTCTATGGAGAAGAACTGCTAGATTGGCCATCATGGACCTCCTTTCCTACCATGCCCTTATCAATGTTCACTGTCAAAGTACACCATGGAGAAGCTGTTGAATTCCTTGTTCTCATGGCCAACGATCTGGAGAAAGTAGTGTCTAAATTCAGGTCGCATTTCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

846

Amino Acids

98.36

Weight (kDa)

6.38

Isoelectric Point (pI)

49.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 16 - 235 8.4e-08 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 957, 2240
AarI CACCTGC 1 cut(s) 685
AatII GACGTC 1 cut(s) 1321
Acc16I TGCGCA 1 cut(s) 182
Acc36I ACCTGC 1 cut(s) 685
AccI GTMKAC 1 cut(s) 559
AccII CGCG 1 cut(s) 626
AciI CCGC 4 cut(s) 1354, 1554, 1796, 2070
AclWI GGATC 7 cut(s) 520, 1464, 1501, 1716, 1821, 1824, 1897
AcoI YGGCCR 4 cut(s) 1574, 1662, 2399, 2490
AcsI RAATTY 8 cut(s) 211, 1691, 1787, 1898, 1949, 2099, 2474, 2519
AcuI CTGAAG 5 cut(s) 1287, 1370, 1397, 2098, 2282
AcyI GRCGYC 1 cut(s) 1318
AfaI GTAC 8 cut(s) 269, 305, 379, 867, 1500, 1857, 1874, 2454
AfiI CCNNNNNNNGG 2 cut(s) 1975, 2128
AjnI CCWGG 2 cut(s) 1530, 2365
AluBI AGCT 9 cut(s) 65, 1131, 1756, 1826, 2051, 2093, 2106, 2468, 2538
AluI AGCT 9 cut(s) 65, 1131, 1756, 1826, 2051, 2093, 2106, 2468, 2538
Alw26I GTCTC 2 cut(s) 608, 830
AlwI GGATC 7 cut(s) 520, 1464, 1501, 1716, 1821, 1824, 1897
Ama87I CYCGRG 2 cut(s) 112, 845
AoxI GGCC 5 cut(s) 1520, 1574, 1662, 2399, 2490
ApeKI GCWGC 1 cut(s) 1823
ApoI RAATTY 8 cut(s) 211, 1691, 1787, 1898, 1949, 2099, 2474, 2519
Asp700I GAANNNNTTC 2 cut(s) 1563, 1787
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 1 cut(s) 2409
AsuHPI GGTGA 4 cut(s) 1369, 1646, 1931, 2059
AsuNHI GCTAGC 1 cut(s) 811
AvaI CYCGRG 2 cut(s) 112, 845
AvaII GGWCC 1 cut(s) 2409
BaeGI GKGCMC 1 cut(s) 1651
BalI TGGCCA 3 cut(s) 1576, 2401, 2492
BanII GRGCYC 1 cut(s) 113
BauI CACGAG 2 cut(s) 171, 1183
BbsI GAAGAC 1 cut(s) 737
BbvI GCAGC 1 cut(s) 1835
BccI CCATC 5 cut(s) 53, 356, 457, 720, 2410
BceAI ACGGC 3 cut(s) 1520, 1583, 1677
BcgI CGANNNNNNTGC 4 cut(s) 172, 206, 466, 500
BciT130I CCWGG 2 cut(s) 1532, 2367
BciVI GTATCC 1 cut(s) 1207
BclI TGATCA 1 cut(s) 394
BcoDI GTCTC 2 cut(s) 608, 830
BfmI CTRYAG 3 cut(s) 680, 1419, 1941
BfuAI ACCTGC 1 cut(s) 685
BfuI GTATCC 1 cut(s) 1207
BglII AGATCT 3 cut(s) 116, 1306, 1471
BisI GCNGC 1 cut(s) 1824
BlsI GCNGC 1 cut(s) 1825
BmcAI AGTACT 1 cut(s) 379
Bme1390I CCNGG 2 cut(s) 1532, 2367
Bme18I GGWCC 1 cut(s) 2409
BmeT110I CYCGRG 2 cut(s) 112, 845
BmgT120I GGNCC 1 cut(s) 2409
BmiI GGNNCC 1 cut(s) 295
BmrFI CCNGG 2 cut(s) 1532, 2367
BmsI GCATC 6 cut(s) 192, 478, 1212, 1807, 2242, 2346
BmtI GCTAGC 1 cut(s) 815
BpiI GAAGAC 1 cut(s) 737
BplI GAGNNNNNCTC 2 cut(s) 1950, 1982
BpmI CTGGAG 2 cut(s) 815, 2522
BsaHI GRCGYC 1 cut(s) 1318
BsaI GGTCTC 2 cut(s) 608, 830
BsaJI CCNNGG 4 cut(s) 1209, 2073, 2244, 2458
BsaXI ACNNNNNCTCC 4 cut(s) 775, 805, 2454, 2484
Bsc4I CCNNNNNNNGG 2 cut(s) 1975, 2128
Bse1I ACTGG 4 cut(s) 14, 649, 1665, 1730
Bse3DI GCAATG 2 cut(s) 135, 1361
BseBI CCWGG 2 cut(s) 1532, 2367
BseDI CCNNGG 4 cut(s) 1209, 2073, 2244, 2458
BseGI GGATG 9 cut(s) 41, 45, 371, 898, 1087, 1203, 1273, 1384, 1774
BseLI CCNNNNNNNGG 2 cut(s) 1975, 2128
BseMI GCAATG 2 cut(s) 135, 1361
BseMII CTCAG 2 cut(s) 560, 2220
BseNI ACTGG 4 cut(s) 14, 649, 1665, 1730
BseRI GAGGAG 1 cut(s) 1940
BseSI GKGCMC 1 cut(s) 1651
BseXI GCAGC 1 cut(s) 1835
Bsh1236I CGCG 1 cut(s) 626
BshFI GGCC 5 cut(s) 1522, 1576, 1664, 2401, 2492
BsiHKCI CYCGRG 2 cut(s) 112, 845
BslI CCNNNNNNNGG 2 cut(s) 1975, 2128
BsmAI GTCTC 2 cut(s) 608, 830
BsmI GAATGC 1 cut(s) 1507
BsnI GGCC 5 cut(s) 1522, 1576, 1664, 2401, 2492
Bso31I GGTCTC 2 cut(s) 608, 830
BsoBI CYCGRG 2 cut(s) 112, 845
Bsp1286I GDGCHC 2 cut(s) 113, 1651
Bsp1407I TGTACA 1 cut(s) 267
Bsp19I CCATGG 1 cut(s) 2458
Bsp68I TCGCGA 1 cut(s) 626
BspACI CCGC 4 cut(s) 1354, 1554, 1796, 2070
BspANI GGCC 5 cut(s) 1522, 1576, 1664, 2401, 2492
BspCNI CTCAG 2 cut(s) 561, 2221
BspFNI CGCG 1 cut(s) 626
BspHI TCATGA 1 cut(s) 391
BspLI GGNNCC 1 cut(s) 295
BspMAI CTGCAG 1 cut(s) 1945
BspMI ACCTGC 1 cut(s) 685
BspOI GCTAGC 1 cut(s) 815
BspPI GGATC 7 cut(s) 520, 1464, 1501, 1716, 1821, 1824, 1897
BspQI GCTCTTC 1 cut(s) 498
BspTNI GGTCTC 2 cut(s) 608, 830
BsrDI GCAATG 2 cut(s) 135, 1361
BsrGI TGTACA 1 cut(s) 267
BsrI ACTGG 4 cut(s) 14, 649, 1665, 1730
BssECI CCNNGG 4 cut(s) 1209, 2073, 2244, 2458
BssNI GRCGYC 1 cut(s) 1318
BssSI CACGAG 2 cut(s) 171, 1183
BssT1I CCWWGG 2 cut(s) 2244, 2458
Bst2BI CACGAG 2 cut(s) 171, 1183
Bst2UI CCWGG 2 cut(s) 1532, 2367
Bst4CI ACNGT 9 cut(s) 22, 389, 657, 1624, 1704, 1919, 2056, 2353, 2446
Bst6I CTCTTC 4 cut(s) 498, 626, 966, 2268
BstACI GRCGYC 1 cut(s) 1318
BstAUI TGTACA 1 cut(s) 267
BstC8I GCNNGC 4 cut(s) 338, 650, 813, 2108
BstDEI CTNAG 3 cut(s) 569, 1171, 2229
BstDSI CCRYGG 2 cut(s) 1209, 2458
BstF5I GGATG 9 cut(s) 41, 45, 371, 898, 1087, 1203, 1273, 1384, 1774
BstFNI CGCG 1 cut(s) 626
BstHHI GCGC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 608, 830
BstMWI GCNNNNNNNGC 3 cut(s) 841, 2069, 2398
BstNI CCWGG 2 cut(s) 1532, 2367
BstNSI RCATGY 2 cut(s) 198, 336
BstSCI CCNGG 2 cut(s) 1530, 2365
BstSFI CTRYAG 3 cut(s) 680, 1419, 1941
BstSLI GKGCMC 1 cut(s) 1651
BstUI CGCG 1 cut(s) 626
BstV1I GCAGC 1 cut(s) 1835
BstV2I GAAGAC 1 cut(s) 737
BstX2I RGATCY 7 cut(s) 116, 1306, 1471, 1493, 1708, 1829, 1889
BstXI CCANNNNNNTGG 1 cut(s) 2500
BstYI RGATCY 7 cut(s) 116, 1306, 1471, 1493, 1708, 1829, 1889
BsuI GTATCC 1 cut(s) 1207
BsuRI GGCC 5 cut(s) 1522, 1576, 1664, 2401, 2492
BtgI CCRYGG 2 cut(s) 1209, 2458
BtsCI GGATG 9 cut(s) 41, 45, 371, 898, 1087, 1203, 1273, 1384, 1774
BtsIMutI CAGTG 4 cut(s) 1672, 1709, 2358, 2442
BtuMI TCGCGA 1 cut(s) 626
BveI ACCTGC 1 cut(s) 685
Cac8I GCNNGC 4 cut(s) 338, 650, 813, 2108
CciI TCATGA 1 cut(s) 391
CfoI GCGC 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 2409
Csp6I GTAC 8 cut(s) 268, 304, 378, 866, 1499, 1856, 1873, 2453
CviQI GTAC 8 cut(s) 268, 304, 378, 866, 1499, 1856, 1873, 2453
DdeI CTNAG 3 cut(s) 569, 1171, 2229
DraI TTTAAA 1 cut(s) 1029
EaeI YGGCCR 4 cut(s) 1574, 1662, 2399, 2490
Eam1104I CTCTTC 4 cut(s) 498, 626, 966, 2268
EarI CTCTTC 4 cut(s) 498, 626, 966, 2268
Eco130I CCWWGG 2 cut(s) 2244, 2458
Eco24I GRGCYC 1 cut(s) 113
Eco31I GGTCTC 2 cut(s) 608, 830
Eco47I GGWCC 1 cut(s) 2409
Eco57I CTGAAG 5 cut(s) 1287, 1370, 1397, 2098, 2282
Eco88I CYCGRG 2 cut(s) 112, 845
EcoRI GAATTC 3 cut(s) 1787, 1949, 2474
EcoRII CCWGG 2 cut(s) 1530, 2365
EcoT14I CCWWGG 2 cut(s) 2244, 2458
EcoT22I ATGCAT 1 cut(s) 2323
EcoT38I GRGCYC 1 cut(s) 113
ErhI CCWWGG 2 cut(s) 2244, 2458
FalI AAGNNNNNCTT 2 cut(s) 1236, 1268
FauI CCCGC 1 cut(s) 1347
FauNDI CATATG 1 cut(s) 2292
FbaI TGATCA 1 cut(s) 394
FblI GTMKAC 1 cut(s) 559
Fnu4HI GCNGC 1 cut(s) 1824
FokI GGATG 9 cut(s) 28, 32, 378, 905, 1094, 1190, 1280, 1391, 1781
FriOI GRGCYC 1 cut(s) 113
Fsp4HI GCNGC 1 cut(s) 1824
FspI TGCGCA 1 cut(s) 182
GlaI GCGC 1 cut(s) 182
GluI GCNGC 1 cut(s) 1824
GsuI CTGGAG 2 cut(s) 815, 2522
HaeIII GGCC 5 cut(s) 1522, 1576, 1664, 2401, 2492
HhaI GCGC 1 cut(s) 183
Hin1I GRCGYC 1 cut(s) 1318
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HincII GTYRAC 4 cut(s) 55, 330, 1731, 2161
HindII GTYRAC 4 cut(s) 55, 330, 1731, 2161
HindIII AAGCTT 1 cut(s) 1754
HinfI GANTC 6 cut(s) 252, 455, 701, 919, 1408, 2132
HphI GGTGA 4 cut(s) 1369, 1646, 1931, 2059
Hpy188III TCNNGA 9 cut(s) 114, 392, 485, 625, 794, 1322, 1512, 1847, 2501
Hpy99I CGWCG 2 cut(s) 1128, 1506
HpyAV CCTTC 7 cut(s) 971, 1231, 1311, 1631, 1661, 2132, 2305
HpyCH4III ACNGT 9 cut(s) 22, 389, 657, 1624, 1704, 1919, 2056, 2353, 2446
HpyCH4IV ACGT 6 cut(s) 57, 165, 1066, 1123, 1318, 1988
HpyCH4V TGCA 8 cut(s) 694, 931, 1057, 1159, 1450, 1823, 1943, 2321
HpyF10VI GCNNNNNNNGC 3 cut(s) 841, 2069, 2398
HpyF3I CTNAG 3 cut(s) 569, 1171, 2229
HpySE526I ACGT 6 cut(s) 57, 165, 1066, 1123, 1318, 1988
Hsp92I GRCGYC 1 cut(s) 1318
HspAI GCGC 1 cut(s) 181
Ksp22I TGATCA 1 cut(s) 394
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 3 cut(s) 293, 783, 1128
Lsp1109I GCAGC 1 cut(s) 1835
LweI GCATC 6 cut(s) 192, 478, 1212, 1807, 2242, 2346
MaeII ACGT 6 cut(s) 57, 165, 1066, 1123, 1318, 1988
MaeIII GTNAC 5 cut(s) 16, 1067, 1142, 1221, 1357
MfeI CAATTG 1 cut(s) 1464
MflI RGATCY 7 cut(s) 116, 1306, 1471, 1493, 1708, 1829, 1889
MhlI GDGCHC 2 cut(s) 113, 1651
MlsI TGGCCA 3 cut(s) 1576, 2401, 2492
MluNI TGGCCA 3 cut(s) 1576, 2401, 2492
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 6 cut(s) 490, 616, 948, 1014, 1106, 1471
Mox20I TGGCCA 3 cut(s) 1576, 2401, 2492
Mph1103I ATGCAT 1 cut(s) 2323
MroXI GAANNNNTTC 2 cut(s) 1563, 1787
MscI TGGCCA 3 cut(s) 1576, 2401, 2492
MseI TTAA 7 cut(s) 839, 1028, 1580, 1803, 1863, 2081, 2253
MslI CAYNNNNRTG 1 cut(s) 1208
Msp20I TGGCCA 3 cut(s) 1576, 2401, 2492
MspR9I CCNGG 2 cut(s) 1532, 2367
MunI CAATTG 1 cut(s) 1464
Mva1269I GAATGC 1 cut(s) 1507
MvaI CCWGG 2 cut(s) 1532, 2367
MvnI CGCG 1 cut(s) 626
MwoI GCNNNNNNNGC 3 cut(s) 841, 2069, 2398
NcoI CCATGG 1 cut(s) 2458
NdeI CATATG 1 cut(s) 2292
NheI GCTAGC 1 cut(s) 811
NlaIV GGNNCC 1 cut(s) 295
NmeAIII GCCGAG 1 cut(s) 2098
NmuCI GTSAC 3 cut(s) 1067, 1221, 1357
NruI TCGCGA 1 cut(s) 626
NsbI TGCGCA 1 cut(s) 182
NsiI ATGCAT 1 cut(s) 2323
NspI RCATGY 2 cut(s) 198, 336
PaeR7I CTCGAG 1 cut(s) 112
PagI TCATGA 1 cut(s) 391
PaqCI CACCTGC 1 cut(s) 685
PciSI GCTCTTC 1 cut(s) 498
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 1 cut(s) 1507
PdmI GAANNNNTTC 2 cut(s) 1563, 1787
PfeI GAWTC 5 cut(s) 455, 701, 919, 1408, 2132
PfoI TCCNGGA 1 cut(s) 1530
PkrI GCNGC 1 cut(s) 1825
PleI GAGTC 1 cut(s) 246
PpsI GAGTC 1 cut(s) 246
PsiI TTATAA 2 cut(s) 957, 2240
Psp6I CCWGG 2 cut(s) 1530, 2365
PspGI CCWGG 2 cut(s) 1530, 2365
PspN4I GGNNCC 1 cut(s) 295
PspPI GGNCC 1 cut(s) 2409
PstI CTGCAG 1 cut(s) 1945
PsuI RGATCY 7 cut(s) 116, 1306, 1471, 1493, 1708, 1829, 1889
RruI TCGCGA 1 cut(s) 626
RsaI GTAC 8 cut(s) 269, 305, 379, 867, 1500, 1857, 1874, 2454
RsaNI GTAC 8 cut(s) 268, 304, 378, 866, 1499, 1856, 1873, 2453
RseI CAYNNNNRTG 1 cut(s) 1208
SapI GCTCTTC 1 cut(s) 498
SaqAI TTAA 7 cut(s) 839, 1028, 1580, 1803, 1863, 2081, 2253
SatI GCNGC 1 cut(s) 1824
Sau96I GGNCC 1 cut(s) 2409
ScaI AGTACT 1 cut(s) 379
SchI GAGTC 1 cut(s) 246
ScrFI CCNGG 2 cut(s) 1532, 2367
SduI GDGCHC 2 cut(s) 113, 1651
SfaNI GCATC 6 cut(s) 192, 478, 1212, 1807, 2242, 2346
SfcI CTRYAG 3 cut(s) 680, 1419, 1941
Sfr274I CTCGAG 1 cut(s) 112
SinI GGWCC 1 cut(s) 2409
SlaI CTCGAG 1 cut(s) 112
SmiMI CAYNNNNRTG 1 cut(s) 1208
SmlI CTYRAG 1 cut(s) 112
SmoI CTYRAG 1 cut(s) 112
SsiI CCGC 4 cut(s) 1354, 1554, 1796, 2070
StyD4I CCNGG 2 cut(s) 1530, 2365
StyI CCWWGG 2 cut(s) 2244, 2458
TaaI ACNGT 9 cut(s) 22, 389, 657, 1624, 1704, 1919, 2056, 2353, 2446
TaiI ACGT 6 cut(s) 60, 168, 1069, 1126, 1321, 1991
TaqI TCGA 8 cut(s) 113, 352, 486, 539, 917, 982, 1137, 1511
TatI WGTACW 5 cut(s) 267, 377, 865, 1872, 2452
TfiI GAWTC 5 cut(s) 455, 701, 919, 1408, 2132
Tru1I TTAA 7 cut(s) 839, 1028, 1580, 1803, 1863, 2081, 2253
Tru9I TTAA 7 cut(s) 839, 1028, 1580, 1803, 1863, 2081, 2253
TscAI CASTG 4 cut(s) 1672, 1709, 2358, 2449
TseFI GTSAC 3 cut(s) 1067, 1221, 1357
TseI GCWGC 1 cut(s) 1823
Tsp45I GTSAC 3 cut(s) 1067, 1221, 1357
TspGWI ACGGA 3 cut(s) 796, 1165, 2144
TspRI CASTG 4 cut(s) 1672, 1709, 2358, 2449
VpaK11BI GGWCC 1 cut(s) 2409
XapI RAATTY 8 cut(s) 211, 1691, 1787, 1898, 1949, 2099, 2474, 2519
XceI RCATGY 2 cut(s) 198, 336
XcmI CCANNNNNNNNNTGG 1 cut(s) 1624
XhoI CTCGAG 1 cut(s) 112
XmiI GTMKAC 1 cut(s) 559
XmnI GAANNNNTTC 2 cut(s) 1563, 1787
ZraI GACGTC 1 cut(s) 1319
ZrmI AGTACT 1 cut(s) 379
Zsp2I ATGCAT 1 cut(s) 2323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.