Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009717

Physical Location & Seq

Genomic Coordinates Reverse (-)

12030706 .. 12036276

Gene Structure 5571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGCTCTATGGCAGTCATCCATCCTAGTTGACGTTTTAGCTGTTCTCCCTATTCCACAGGTAGTAATTCTCAATTTCTTTAGGGGCTCGAGATCTTTGGAAGCAATGAAGTTTATGAACTTGCTTGTTCTCGTCCAATACGTTCCACGAGTTCTGCGCATCTATCTCGCATGTAAGGAGTTCAAAAATTCTCCGAAAGGAAAGTTTGGATTATGGATAAAAGGTGGACTCAATTTCTTTATGTACACTCTTGCTAGTCATGTGGAATCAGCAAGTAAAGAGCAACTACGATGGAAGACAGAACTTGAAAATATGATGAGAACTGAAAGAAAGATGAGAATTGAACGGAGCAAGGGTCCGGAGGTAGAACAATGGCTAGCCAAAAATGGTCTCCCTATGCGTTTAATGCCCGAGATCATGGAAAAGGTAGTACAAGTGGATTTAGAACAAAACAGGGATGTTGATGTGGAGAATATCCTTTCGATTCTTCCCTTGCAACTTCAAAGGGATATTTTAGTTTATAAGGAGAAGTTGGAAGAGGAAGGTCGAAAGATAGAGTTGTGGTTATCTGAAAATCGCCTCCCAATGCGTTTAAAGTTGGAGATCATGGAAAAGGTGGTGCAACAAAAACGTGAAGAAAATAGGGATGTTCATGTGGATAATTTCCTATCTATTCTACCAGAGGAACGTCGGAGCTATATCGAAAGTTATAAACGGAAATTGCAAGAGAAAGACTTAGAAGTTGGCTCGTGGTTATCTAAAAATGGCATCCCCGTGGATACAAAGTCACAGATCATGGAGAAGGTTCAAGTAGAACTTGAAGAAAACAGGGATGTGGAAGTGAAGAATATCCTCTCCATTCTTCCTTCAGATCTCCAAAGACGTCTTGAATGGTATATGCCTTTGAGTAGGCTGAAGCGGGTGACATTGCTTGAAAGAATGGATGAAAGAGTGTTGAAAGCGATTTGTGAGAATCTTCAGCCTATAGAGTTTCCAGCCAAACTCGTCATTATGCAAGAGGGTCAACCAATTGAAGATCTGTTCTTCATTGTAGTCGGATCTGTACGACGGCATTCGAGAAATAGGCCGATGTTCCAGGAATACGAAACTGAAATATGCGGAGAAGAACTTCTGGTTTGGCCATTAACAACCTCCTTTCCTGCTGTATTACCCAGAGCAACCAAGACCGTTATGGTGGGTGAAGGTTTTAGTGCCCTTCTCCTTACGGCCAGTGATATAAAGAGTGTCGGCTCTAAATTCAGGCCACAGTGGGATCTCATTACTTCTTACTGGTTGACTATGCTAAAGAAAGTGCCAAAGCTTCAATATATGGATGAAGAAGTTTTGAAAGAATTCTTACCGCATCTTAACAAGCAGGATCAATTTGCAGCTAGATCCTCCTATGGTATTCAGGAGAATGTACCACTTAAATCCATGTACTTCATCACAGAGGGATCTCTAAAATTTACAAAAAGTGATAACGGTGATGAGGAGTTTTTTCGTTCTGCAGGGGAATTCTATGGAGAAGAACTCCTAGATTGGGTATTAGATACGTCCTTTCCTGCCATAACCCCCATTTCCACCCATTCTGCTCTTTGCAGCGATCACAATGAAGCTACCGTGTTGGCTATCACCGCCGAGGACTTAAAGAGTGTAGCTTCTAAATTCAGCTCGCACTTCAGCACCCTTCAAACGGATTCTCAATTTGATCTTTCAACTTTTGTCAACTTGACTAGGCTAAAGAAAGTTCCAAAACTTCAAACTATGGACGAAGAAGTTTTGAAAGCAATCTCTGAGCATCTTATAACCAAGGTGTTTAATTATCTGAAGATCATTGAAGAGGGAAAACCACTTCATATGATGTTATTCATTGTGAAGGGAAATGCATACCTAGAGAAGAAACATAGCACAGATAGAGTGATGCTAAAGCCTGGACAATTCTATGGAGAAGAACTACTAGATTGGCCATCATGGACCTCTTTTCCTACCATGCCCTTATCAATGTTCACTGTCAAAGTAGACCATGGAGAAGCTGTTGAATTCCTCGTTCTCATGGCCAACGATCTGGAGAAAGTAGTGTCTAAATTCAGGTCGCATTTCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

701

Amino Acids

81.52

Weight (kDa)

6.09

Isoelectric Point (pI)

49.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009717)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20740 FvH4_7g20740 FvH4_7g20740
rosa_chinensis	RchiOBHm_Chr1g0364861 RchiOBHm_Chr1g0364961
rosa_laevigata	RLG00000027456
rosa_multiflora	Rmu_ssc0000112.1_g000024
rosa_roxburghii	Rroxscaffold_4G00291640 Rroxscaffold_4G00292050
rosa_rugosa	Rorug01G0318600 Rorug01G0318600 Rorug01G0318600
rosa_samantha	Rh1AG327500 Rh1BG288700 Rh1CG305400 Rh1DG320300
rosa_wichuraiana	Rw1G029020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	522, 711, 1805
AatII	GACGTC	1 cut(s)	886
Acc16I	TGCGCA	1 cut(s)	158
AccI	GTMKAC	1 cut(s)	2019
AccIII	TCCGGA	1 cut(s)	358
AciI	CCGC	4 cut(s)	919, 1119, 1361, 1635
AclWI	GGATC	5 cut(s)	1066, 1281, 1386, 1389, 1462
AcoI	YGGCCR	4 cut(s)	1139, 1227, 1964, 2055
AcsI	RAATTY	8 cut(s)	187, 1256, 1352, 1463, 1514, 1664, 2039, 2084
AcuI	CTGAAG	5 cut(s)	852, 935, 962, 1663, 1847
AcyI	GRCGYC	1 cut(s)	883
AfaI	GTAC	5 cut(s)	245, 432, 1065, 1422, 1439
AfiI	CCNNNNNNNGG	2 cut(s)	1540, 1693
AjnI	CCWGG	2 cut(s)	1095, 1930
AluBI	AGCT	9 cut(s)	41, 696, 1321, 1391, 1616, 1658, 1671, 2033, 2103
AluI	AGCT	9 cut(s)	41, 696, 1321, 1391, 1616, 1658, 1671, 2033, 2103
Alw26I	GTCTC	1 cut(s)	395
AlwI	GGATC	5 cut(s)	1066, 1281, 1386, 1389, 1462
Ama87I	CYCGRG	2 cut(s)	88, 410
Aor13HI	TCCGGA	1 cut(s)	358
AoxI	GGCC	6 cut(s)	1085, 1139, 1227, 1262, 1964, 2055
ApeKI	GCWGC	2 cut(s)	1388, 1599
ApoI	RAATTY	8 cut(s)	187, 1256, 1352, 1463, 1514, 1664, 2039, 2084
Asp700I	GAANNNNTTC	2 cut(s)	1128, 1352
AspLEI	GCGC	1 cut(s)	159
AspS9I	GGNCC	2 cut(s)	356, 1974
AsuHPI	GGTGA	4 cut(s)	934, 1211, 1496, 1624
AsuNHI	GCTAGC	1 cut(s)	376
AvaI	CYCGRG	2 cut(s)	88, 410
AvaII	GGWCC	2 cut(s)	356, 1974
BaeGI	GKGCMC	1 cut(s)	1216
BalI	TGGCCA	3 cut(s)	1141, 1966, 2057
BanII	GRGCYC	1 cut(s)	89
BauI	CACGAG	2 cut(s)	147, 748
BbsI	GAAGAC	1 cut(s)	302
BbvI	GCAGC	2 cut(s)	1400, 1611
BccI	CCATC	3 cut(s)	29, 285, 1975
BceAI	ACGGC	2 cut(s)	1085, 1242
BcgI	CGANNNNNNTGC	2 cut(s)	148, 182
BciT130I	CCWGG	2 cut(s)	1097, 1932
BciVI	GTATCC	1 cut(s)	772
BcoDI	GTCTC	1 cut(s)	395
BfaI	CTAG	9 cut(s)	26, 255, 377, 1392, 1535, 1734, 1892, 1958, 2104
BfmI	CTRYAG	2 cut(s)	984, 1506
BfuI	GTATCC	1 cut(s)	772
BglII	AGATCT	3 cut(s)	92, 871, 1036
BisI	GCNGC	2 cut(s)	1389, 1600
BlsI	GCNGC	2 cut(s)	1390, 1601
Bme1390I	CCNGG	2 cut(s)	1097, 1932
Bme18I	GGWCC	2 cut(s)	356, 1974
BmeT110I	CYCGRG	2 cut(s)	88, 410
BmgT120I	GGNCC	2 cut(s)	356, 1974
BmiI	GGNNCC	1 cut(s)	357
BmrFI	CCNGG	2 cut(s)	1097, 1932
BmsI	GCATC	5 cut(s)	168, 777, 1372, 1807, 1911
BmtI	GCTAGC	1 cut(s)	380
BpiI	GAAGAC	1 cut(s)	302
BplI	GAGNNNNNCTC	2 cut(s)	1515, 1547
BpmI	CTGGAG	1 cut(s)	2087
BsaHI	GRCGYC	1 cut(s)	883
BsaI	GGTCTC	1 cut(s)	395
BsaJI	CCNNGG	4 cut(s)	774, 1638, 1809, 2023
BsaWI	WCCGGW	1 cut(s)	358
BsaXI	ACNNNNNCTCC	4 cut(s)	340, 370, 2019, 2049
Bsc4I	CCNNNNNNNGG	2 cut(s)	1540, 1693
Bse1I	ACTGG	2 cut(s)	1230, 1295
Bse3DI	GCAATG	2 cut(s)	111, 926
BseAI	TCCGGA	1 cut(s)	358
BseBI	CCWGG	2 cut(s)	1097, 1932
BseDI	CCNNGG	4 cut(s)	774, 1638, 1809, 2023
BseGI	GGATG	8 cut(s)	17, 21, 463, 652, 768, 838, 949, 1339
BseLI	CCNNNNNNNGG	2 cut(s)	1540, 1693
BseMI	GCAATG	2 cut(s)	111, 926
BseMII	CTCAG	1 cut(s)	1785
BseNI	ACTGG	2 cut(s)	1230, 1295
BseRI	GAGGAG	1 cut(s)	1505
BseSI	GKGCMC	1 cut(s)	1216
BseXI	GCAGC	2 cut(s)	1400, 1611
BshFI	GGCC	6 cut(s)	1087, 1141, 1229, 1264, 1966, 2057
BsiHKCI	CYCGRG	2 cut(s)	88, 410
BsiSI	CCGG	1 cut(s)	359
BslI	CCNNNNNNNGG	2 cut(s)	1540, 1693
BsmAI	GTCTC	1 cut(s)	395
BsmI	GAATGC	1 cut(s)	1072
BsnI	GGCC	6 cut(s)	1087, 1141, 1229, 1264, 1966, 2057
Bso31I	GGTCTC	1 cut(s)	395
BsoBI	CYCGRG	2 cut(s)	88, 410
Bsp1286I	GDGCHC	2 cut(s)	89, 1216
Bsp13I	TCCGGA	1 cut(s)	358
Bsp1407I	TGTACA	1 cut(s)	243
Bsp19I	CCATGG	1 cut(s)	2023
BspACI	CCGC	4 cut(s)	919, 1119, 1361, 1635
BspANI	GGCC	6 cut(s)	1087, 1141, 1229, 1264, 1966, 2057
BspCNI	CTCAG	1 cut(s)	1786
BspEI	TCCGGA	1 cut(s)	358
BspLI	GGNNCC	1 cut(s)	357
BspMAI	CTGCAG	1 cut(s)	1510
BspOI	GCTAGC	1 cut(s)	380
BspPI	GGATC	5 cut(s)	1066, 1281, 1386, 1389, 1462
BspTNI	GGTCTC	1 cut(s)	395
BsrDI	GCAATG	2 cut(s)	111, 926
BsrGI	TGTACA	1 cut(s)	243
BsrI	ACTGG	2 cut(s)	1230, 1295
BssECI	CCNNGG	4 cut(s)	774, 1638, 1809, 2023
BssNI	GRCGYC	1 cut(s)	883
BssSI	CACGAG	2 cut(s)	147, 748
BssT1I	CCWWGG	2 cut(s)	1809, 2023
Bst2BI	CACGAG	2 cut(s)	147, 748
Bst2UI	CCWGG	2 cut(s)	1097, 1932
Bst4CI	ACNGT	5 cut(s)	1189, 1269, 1484, 1621, 2011
Bst6I	CTCTTC	2 cut(s)	531, 1833
BstACI	GRCGYC	1 cut(s)	883
BstAUI	TGTACA	1 cut(s)	243
BstC8I	GCNNGC	2 cut(s)	378, 1673
BstDEI	CTNAG	2 cut(s)	736, 1794
BstDSI	CCRYGG	2 cut(s)	774, 2023
BstF5I	GGATG	8 cut(s)	17, 21, 463, 652, 768, 838, 949, 1339
BstHHI	GCGC	1 cut(s)	159
BstMAI	GTCTC	1 cut(s)	395
BstMWI	GCNNNNNNNGC	2 cut(s)	406, 1634
BstNI	CCWGG	2 cut(s)	1097, 1932
BstNSI	RCATGY	1 cut(s)	174
BstSCI	CCNGG	2 cut(s)	1095, 1930
BstSFI	CTRYAG	2 cut(s)	984, 1506
BstSLI	GKGCMC	1 cut(s)	1216
BstV1I	GCAGC	2 cut(s)	1400, 1611
BstV2I	GAAGAC	1 cut(s)	302
BstX2I	RGATCY	7 cut(s)	92, 871, 1036, 1058, 1273, 1394, 1454
BstXI	CCANNNNNNTGG	1 cut(s)	2065
BstYI	RGATCY	7 cut(s)	92, 871, 1036, 1058, 1273, 1394, 1454
BsuI	GTATCC	1 cut(s)	772
BsuRI	GGCC	6 cut(s)	1087, 1141, 1229, 1264, 1966, 2057
BtgI	CCRYGG	2 cut(s)	774, 2023
BtsCI	GGATG	8 cut(s)	17, 21, 463, 652, 768, 838, 949, 1339
BtsIMutI	CAGTG	3 cut(s)	1237, 1274, 2007
Cac8I	GCNNGC	2 cut(s)	378, 1673
CfoI	GCGC	1 cut(s)	159
Cfr13I	GGNCC	2 cut(s)	356, 1974
Csp6I	GTAC	5 cut(s)	244, 431, 1064, 1421, 1438
CviQI	GTAC	5 cut(s)	244, 431, 1064, 1421, 1438
DdeI	CTNAG	2 cut(s)	736, 1794
DraI	TTTAAA	1 cut(s)	594
EaeI	YGGCCR	4 cut(s)	1139, 1227, 1964, 2055
Eam1104I	CTCTTC	2 cut(s)	531, 1833
EarI	CTCTTC	2 cut(s)	531, 1833
Eco130I	CCWWGG	2 cut(s)	1809, 2023
Eco24I	GRGCYC	1 cut(s)	89
Eco31I	GGTCTC	1 cut(s)	395
Eco47I	GGWCC	2 cut(s)	356, 1974
Eco57I	CTGAAG	5 cut(s)	852, 935, 962, 1663, 1847
Eco88I	CYCGRG	2 cut(s)	88, 410
EcoRI	GAATTC	3 cut(s)	1352, 1514, 2039
EcoRII	CCWGG	2 cut(s)	1095, 1930
EcoT14I	CCWWGG	2 cut(s)	1809, 2023
EcoT22I	ATGCAT	1 cut(s)	1888
EcoT38I	GRGCYC	1 cut(s)	89
ErhI	CCWWGG	2 cut(s)	1809, 2023
FalI	AAGNNNNNCTT	2 cut(s)	801, 833
FauI	CCCGC	1 cut(s)	912
FauNDI	CATATG	1 cut(s)	1857
FblI	GTMKAC	1 cut(s)	2019
Fnu4HI	GCNGC	2 cut(s)	1389, 1600
FokI	GGATG	8 cut(s)	4, 8, 470, 659, 755, 845, 956, 1346
FriOI	GRGCYC	1 cut(s)	89
Fsp4HI	GCNGC	2 cut(s)	1389, 1600
FspBI	CTAG	9 cut(s)	26, 255, 377, 1392, 1535, 1734, 1892, 1958, 2104
FspI	TGCGCA	1 cut(s)	158
GlaI	GCGC	1 cut(s)	158
GluI	GCNGC	2 cut(s)	1389, 1600
GsuI	CTGGAG	1 cut(s)	2087
HaeIII	GGCC	6 cut(s)	1087, 1141, 1229, 1264, 1966, 2057
HapII	CCGG	1 cut(s)	359
HhaI	GCGC	1 cut(s)	159
Hin1I	GRCGYC	1 cut(s)	883
Hin6I	GCGC	1 cut(s)	157
HinP1I	GCGC	1 cut(s)	157
HincII	GTYRAC	4 cut(s)	31, 1025, 1296, 1726
HindII	GTYRAC	4 cut(s)	31, 1025, 1296, 1726
HindIII	AAGCTT	1 cut(s)	1319
HinfI	GANTC	5 cut(s)	228, 266, 484, 973, 1697
HpaII	CCGG	1 cut(s)	359
HphI	GGTGA	4 cut(s)	934, 1211, 1496, 1624
Hpy166II	GTNNAC	8 cut(s)	31, 227, 246, 1025, 1296, 1726, 2007, 2020
Hpy188I	TCNGA	7 cut(s)	195, 571, 693, 871, 1058, 1795, 1827
Hpy188III	TCNNGA	6 cut(s)	90, 359, 887, 1077, 1412, 2066
Hpy8I	GTNNAC	8 cut(s)	31, 227, 246, 1025, 1296, 1726, 2007, 2020
Hpy99I	CGWCG	2 cut(s)	693, 1071
HpyAV	CCTTC	7 cut(s)	536, 796, 876, 1196, 1226, 1697, 1870
HpyCH4III	ACNGT	5 cut(s)	1189, 1269, 1484, 1621, 2011
HpyCH4IV	ACGT	6 cut(s)	33, 141, 631, 688, 883, 1553
HpyCH4V	TGCA	8 cut(s)	496, 622, 724, 1015, 1388, 1508, 1599, 1886
HpyF10VI	GCNNNNNNNGC	2 cut(s)	406, 1634
HpyF3I	CTNAG	2 cut(s)	736, 1794
HpySE526I	ACGT	6 cut(s)	33, 141, 631, 688, 883, 1553
Hsp92I	GRCGYC	1 cut(s)	883
HspAI	GCGC	1 cut(s)	157
Kpn2I	TCCGGA	1 cut(s)	358
LmnI	GCTCC	2 cut(s)	348, 693
Lsp1109I	GCAGC	2 cut(s)	1400, 1611
LweI	GCATC	5 cut(s)	168, 777, 1372, 1807, 1911
MaeI	CTAG	9 cut(s)	26, 255, 377, 1392, 1535, 1734, 1892, 1958, 2104
MaeII	ACGT	6 cut(s)	33, 141, 631, 688, 883, 1553
MaeIII	GTNAC	2 cut(s)	786, 922
MfeI	CAATTG	1 cut(s)	1029
MflI	RGATCY	7 cut(s)	92, 871, 1036, 1058, 1273, 1394, 1454
MhlI	GDGCHC	2 cut(s)	89, 1216
MlsI	TGGCCA	3 cut(s)	1141, 1966, 2057
MluNI	TGGCCA	3 cut(s)	1141, 1966, 2057
MlyI	GAGTC	1 cut(s)	222
MmeI	TCCRAC	4 cut(s)	513, 579, 671, 1036
Mox20I	TGGCCA	3 cut(s)	1141, 1966, 2057
Mph1103I	ATGCAT	1 cut(s)	1888
MroI	TCCGGA	1 cut(s)	358
MroXI	GAANNNNTTC	2 cut(s)	1128, 1352
MscI	TGGCCA	3 cut(s)	1141, 1966, 2057
MseI	TTAA	7 cut(s)	404, 593, 1145, 1368, 1428, 1646, 1818
MslI	CAYNNNNRTG	1 cut(s)	773
Msp20I	TGGCCA	3 cut(s)	1141, 1966, 2057
MspI	CCGG	1 cut(s)	359
MspR9I	CCNGG	2 cut(s)	1097, 1932
MunI	CAATTG	1 cut(s)	1029
Mva1269I	GAATGC	1 cut(s)	1072
MvaI	CCWGG	2 cut(s)	1097, 1932
MwoI	GCNNNNNNNGC	2 cut(s)	406, 1634
NcoI	CCATGG	1 cut(s)	2023
NdeI	CATATG	1 cut(s)	1857
NheI	GCTAGC	1 cut(s)	376
NlaIV	GGNNCC	1 cut(s)	357
NmeAIII	GCCGAG	1 cut(s)	1663
NmuCI	GTSAC	2 cut(s)	786, 922
NsbI	TGCGCA	1 cut(s)	158
NsiI	ATGCAT	1 cut(s)	1888
NspI	RCATGY	1 cut(s)	174
PaeR7I	CTCGAG	1 cut(s)	88
PcsI	WCGNNNNNNNCGW	1 cut(s)	138
PctI	GAATGC	1 cut(s)	1072
PdmI	GAANNNNTTC	2 cut(s)	1128, 1352
PfeI	GAWTC	4 cut(s)	266, 484, 973, 1697
PfoI	TCCNGGA	1 cut(s)	1095
PkrI	GCNGC	2 cut(s)	1390, 1601
PleI	GAGTC	1 cut(s)	222
PpsI	GAGTC	1 cut(s)	222
PsiI	TTATAA	3 cut(s)	522, 711, 1805
Psp6I	CCWGG	2 cut(s)	1095, 1930
PspGI	CCWGG	2 cut(s)	1095, 1930
PspN4I	GGNNCC	1 cut(s)	357
PspPI	GGNCC	2 cut(s)	356, 1974
PstI	CTGCAG	1 cut(s)	1510
PsuI	RGATCY	7 cut(s)	92, 871, 1036, 1058, 1273, 1394, 1454
RsaI	GTAC	5 cut(s)	245, 432, 1065, 1422, 1439
RsaNI	GTAC	5 cut(s)	244, 431, 1064, 1421, 1438
RseI	CAYNNNNRTG	1 cut(s)	773
SaqAI	TTAA	7 cut(s)	404, 593, 1145, 1368, 1428, 1646, 1818
SatI	GCNGC	2 cut(s)	1389, 1600
Sau96I	GGNCC	2 cut(s)	356, 1974
SchI	GAGTC	1 cut(s)	222
ScrFI	CCNGG	2 cut(s)	1097, 1932
SduI	GDGCHC	2 cut(s)	89, 1216
SfaNI	GCATC	5 cut(s)	168, 777, 1372, 1807, 1911
SfcI	CTRYAG	2 cut(s)	984, 1506
Sfr274I	CTCGAG	1 cut(s)	88
SinI	GGWCC	2 cut(s)	356, 1974
SlaI	CTCGAG	1 cut(s)	88
SmiMI	CAYNNNNRTG	1 cut(s)	773
SmlI	CTYRAG	1 cut(s)	88
SmoI	CTYRAG	1 cut(s)	88
SsiI	CCGC	4 cut(s)	919, 1119, 1361, 1635
SspMI	CTAG	9 cut(s)	26, 255, 377, 1392, 1535, 1734, 1892, 1958, 2104
StyD4I	CCNGG	2 cut(s)	1095, 1930
StyI	CCWWGG	2 cut(s)	1809, 2023
TaaI	ACNGT	5 cut(s)	1189, 1269, 1484, 1621, 2011
TaiI	ACGT	6 cut(s)	36, 144, 634, 691, 886, 1556
TaqI	TCGA	5 cut(s)	89, 482, 547, 702, 1076
TatI	WGTACW	3 cut(s)	243, 430, 1437
TfiI	GAWTC	4 cut(s)	266, 484, 973, 1697
Tru1I	TTAA	7 cut(s)	404, 593, 1145, 1368, 1428, 1646, 1818
Tru9I	TTAA	7 cut(s)	404, 593, 1145, 1368, 1428, 1646, 1818
TscAI	CASTG	3 cut(s)	1237, 1274, 2014
TseFI	GTSAC	2 cut(s)	786, 922
TseI	GCWGC	2 cut(s)	1388, 1599
Tsp45I	GTSAC	2 cut(s)	786, 922
TspGWI	ACGGA	3 cut(s)	361, 730, 1709
TspRI	CASTG	3 cut(s)	1237, 1274, 2014
VpaK11BI	GGWCC	2 cut(s)	356, 1974
XapI	RAATTY	8 cut(s)	187, 1256, 1352, 1463, 1514, 1664, 2039, 2084
XceI	RCATGY	1 cut(s)	174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1189
XhoI	CTCGAG	1 cut(s)	88
XmiI	GTMKAC	1 cut(s)	2019
XmnI	GAANNNNTTC	2 cut(s)	1128, 1352
XspI	CTAG	9 cut(s)	26, 255, 377, 1392, 1535, 1734, 1892, 1958, 2104
ZraI	GACGTC	1 cut(s)	884
Zsp2I	ATGCAT	1 cut(s)	1888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.