Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20710 FvH4_7g20740 FvH4_7g20740 FvH4_7g20740 |
| rosa_chinensis | RchiOBHm_Chr1g0364861 RchiOBHm_Chr1g0364961 |
| rosa_laevigata | RLG00000027456 |
| rosa_multiflora | Rmu_ssc0000112.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00291640 Rroxscaffold_4G00292050 |
| rosa_rugosa | Rorug01G0318600 Rorug01G0318600 Rorug01G0318600 |
| rosa_samantha | Rh1AG327500 Rh1BG288700 Rh1CG305400 Rh1DG320300 |
| rosa_wichuraiana | Rw1G029020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 783, 972, 1346 |
| AccI | GTMKAC | 1 cut(s) | 1668 |
| AccII | CGCG | 2 cut(s) | 2257, 2665 |
| AciI | CCGC | 3 cut(s) | 1174, 1827, 2219 |
| AclWI | GGATC | 5 cut(s) | 62, 131, 144, 246, 2374 |
| AcoI | YGGCCR | 2 cut(s) | 1739, 2625 |
| AcuI | CTGAAG | 2 cut(s) | 1541, 2245 |
| AfaI | GTAC | 2 cut(s) | 30, 537 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 550, 1890, 2128, 2452 |
| AflII | CTTAAG | 2 cut(s) | 1967, 2375 |
| AjnI | CCWGG | 4 cut(s) | 490, 792, 941, 981 |
| AluBI | AGCT | 8 cut(s) | 215, 338, 1009, 1921, 1952, 2198, 2240, 2673 |
| AluI | AGCT | 8 cut(s) | 215, 338, 1009, 1921, 1952, 2198, 2240, 2673 |
| Alw26I | GTCTC | 2 cut(s) | 122, 1791 |
| AlwI | GGATC | 5 cut(s) | 62, 131, 144, 246, 2374 |
| Ama87I | CYCGRG | 1 cut(s) | 281 |
| AoxI | GGCC | 3 cut(s) | 1739, 1862, 2625 |
| ApeKI | GCWGC | 1 cut(s) | 212 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 436, 468 |
| AseI | ATTAAT | 1 cut(s) | 1674 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 60, 1728, 2604 |
| AspLEI | GCGC | 1 cut(s) | 2259 |
| AspS9I | GGNCC | 2 cut(s) | 452, 2474 |
| AsuHPI | GGTGA | 3 cut(s) | 1189, 1540, 1816 |
| AsuII | TTCGAA | 1 cut(s) | 1621 |
| AvaI | CYCGRG | 1 cut(s) | 281 |
| AvaII | GGWCC | 2 cut(s) | 452, 2474 |
| BalI | TGGCCA | 1 cut(s) | 1741 |
| BamHI | GGATCC | 1 cut(s) | 136 |
| BanII | GRGCYC | 1 cut(s) | 1816 |
| BauI | CACGAG | 1 cut(s) | 2609 |
| BbsI | GAAGAC | 3 cut(s) | 434, 1256, 2535 |
| BbvCI | CCTCAGC | 1 cut(s) | 2274 |
| BbvI | GCAGC | 1 cut(s) | 224 |
| BccI | CCATC | 4 cut(s) | 381, 462, 1700, 1750 |
| BceAI | ACGGC | 1 cut(s) | 2058 |
| BciT130I | CCWGG | 4 cut(s) | 492, 794, 943, 983 |
| BclI | TGATCA | 1 cut(s) | 2413 |
| BcoDI | GTCTC | 2 cut(s) | 122, 1791 |
| BfaI | CTAG | 6 cut(s) | 191, 524, 1809, 2123, 2534, 2674 |
| BfrI | CTTAAG | 2 cut(s) | 1967, 2375 |
| BisI | GCNGC | 1 cut(s) | 213 |
| BlsI | GCNGC | 1 cut(s) | 214 |
| Bme1390I | CCNGG | 4 cut(s) | 492, 794, 943, 983 |
| Bme18I | GGWCC | 2 cut(s) | 452, 2474 |
| BmeT110I | CYCGRG | 1 cut(s) | 281 |
| BmgT120I | GGNCC | 2 cut(s) | 452, 2474 |
| BmiI | GGNNCC | 3 cut(s) | 138, 453, 2271 |
| BmrFI | CCNGG | 4 cut(s) | 492, 794, 943, 983 |
| BmsI | GCATC | 6 cut(s) | 386, 1161, 1398, 1588, 1972, 2380 |
| BpiI | GAAGAC | 3 cut(s) | 434, 1256, 2535 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2103, 2135 |
| Bpu10I | CCTNAGC | 2 cut(s) | 72, 2274 |
| Bpu14I | TTCGAA | 1 cut(s) | 1621 |
| BpuEI | CTTGAG | 2 cut(s) | 1568, 1943 |
| Bsa29I | ATCGAT | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 2 cut(s) | 491, 941 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 550, 1890, 2128, 2452 |
| Bse1I | ACTGG | 7 cut(s) | 41, 77, 138, 455, 1322, 1542, 1895 |
| Bse3DI | GCAATG | 2 cut(s) | 183, 1993 |
| BseBI | CCWGG | 4 cut(s) | 492, 794, 943, 983 |
| BseCI | ATCGAT | 1 cut(s) | 230 |
| BseDI | CCNNGG | 2 cut(s) | 491, 941 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 550, 1890, 2128, 2452 |
| BseMI | GCAATG | 2 cut(s) | 183, 1993 |
| BseMII | CTCAG | 7 cut(s) | 24, 1041, 1773, 2028, 2288, 2358, 2441 |
| BseNI | ACTGG | 7 cut(s) | 41, 77, 138, 455, 1322, 1542, 1895 |
| BseXI | GCAGC | 1 cut(s) | 224 |
| BsgI | GTGCAG | 1 cut(s) | 2004 |
| Bsh1236I | CGCG | 2 cut(s) | 2257, 2665 |
| Bsh1285I | CGRYCG | 1 cut(s) | 230 |
| BshFI | GGCC | 3 cut(s) | 1741, 1864, 2627 |
| BshVI | ATCGAT | 1 cut(s) | 230 |
| BsiEI | CGRYCG | 1 cut(s) | 230 |
| BsiHKCI | CYCGRG | 1 cut(s) | 281 |
| BslFI | GGGAC | 1 cut(s) | 981 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 550, 1890, 2128, 2452 |
| BsmAI | GTCTC | 2 cut(s) | 122, 1791 |
| BsmFI | GGGAC | 1 cut(s) | 981 |
| BsnI | GGCC | 3 cut(s) | 1741, 1864, 2627 |
| BsoBI | CYCGRG | 1 cut(s) | 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 1621 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1816 |
| BspACI | CCGC | 3 cut(s) | 1174, 1827, 2219 |
| BspANI | GGCC | 3 cut(s) | 1741, 1864, 2627 |
| BspCNI | CTCAG | 7 cut(s) | 25, 1042, 1774, 2029, 2287, 2359, 2442 |
| BspDI | ATCGAT | 1 cut(s) | 230 |
| BspFNI | CGCG | 2 cut(s) | 2257, 2665 |
| BspHI | TCATGA | 1 cut(s) | 1245 |
| BspLI | GGNNCC | 3 cut(s) | 138, 453, 2271 |
| BspPI | GGATC | 5 cut(s) | 62, 131, 144, 246, 2374 |
| BspT104I | TTCGAA | 1 cut(s) | 1621 |
| BspTI | CTTAAG | 2 cut(s) | 1967, 2375 |
| BsrDI | GCAATG | 2 cut(s) | 183, 1993 |
| BsrI | ACTGG | 7 cut(s) | 41, 77, 138, 455, 1322, 1542, 1895 |
| BssECI | CCNNGG | 2 cut(s) | 491, 941 |
| BssNAI | GTATAC | 1 cut(s) | 1669 |
| BssSI | CACGAG | 1 cut(s) | 2609 |
| Bst1107I | GTATAC | 1 cut(s) | 1669 |
| Bst2BI | CACGAG | 1 cut(s) | 2609 |
| Bst2UI | CCWGG | 4 cut(s) | 492, 794, 943, 983 |
| Bst4CI | ACNGT | 6 cut(s) | 22, 295, 1612, 1869, 2578, 2597 |
| Bst6I | CTCTTC | 2 cut(s) | 1655, 2633 |
| BstAFI | CTTAAG | 2 cut(s) | 1967, 2375 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1171 |
| BstBI | TTCGAA | 1 cut(s) | 1621 |
| BstC8I | GCNNGC | 3 cut(s) | 1074, 1220, 1831 |
| BstDEI | CTNAG | 8 cut(s) | 33, 72, 1050, 1782, 2037, 2274, 2367, 2450 |
| BstFNI | CGCG | 2 cut(s) | 2257, 2665 |
| BstHHI | GCGC | 1 cut(s) | 2259 |
| BstMAI | GTCTC | 2 cut(s) | 122, 1791 |
| BstMCI | CGRYCG | 1 cut(s) | 230 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1171, 1585, 1969 |
| BstNI | CCWGG | 4 cut(s) | 492, 794, 943, 983 |
| BstNSI | RCATGY | 1 cut(s) | 803 |
| BstSCI | CCNGG | 4 cut(s) | 490, 792, 941, 981 |
| BstUI | CGCG | 2 cut(s) | 2257, 2665 |
| BstV1I | GCAGC | 1 cut(s) | 224 |
| BstV2I | GAAGAC | 3 cut(s) | 434, 1256, 2535 |
| BstX2I | RGATCY | 3 cut(s) | 136, 238, 2379 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 514, 1706, 1837, 2390 |
| BstYI | RGATCY | 3 cut(s) | 136, 238, 2379 |
| BstZ17I | GTATAC | 1 cut(s) | 1669 |
| Bsu15I | ATCGAT | 1 cut(s) | 230 |
| BsuRI | GGCC | 3 cut(s) | 1741, 1864, 2627 |
| BsuTUI | ATCGAT | 1 cut(s) | 230 |
| BtsI | GCAGTG | 2 cut(s) | 2175, 2214 |
| BtsIMutI | CAGTG | 5 cut(s) | 1888, 2034, 2175, 2214, 2602 |
| Cac8I | GCNNGC | 3 cut(s) | 1074, 1220, 1831 |
| CciI | TCATGA | 1 cut(s) | 1245 |
| CfoI | GCGC | 1 cut(s) | 2259 |
| Cfr13I | GGNCC | 2 cut(s) | 452, 2474 |
| ClaI | ATCGAT | 1 cut(s) | 230 |
| CseI | GACGC | 1 cut(s) | 2558 |
| Csp6I | GTAC | 2 cut(s) | 29, 536 |
| CviQI | GTAC | 2 cut(s) | 29, 536 |
| DdeI | CTNAG | 8 cut(s) | 33, 72, 1050, 1782, 2037, 2274, 2367, 2450 |
| DraI | TTTAAA | 3 cut(s) | 856, 1233, 1512 |
| EaeI | YGGCCR | 2 cut(s) | 1739, 2625 |
| Eam1104I | CTCTTC | 2 cut(s) | 1655, 2633 |
| EarI | CTCTTC | 2 cut(s) | 1655, 2633 |
| Eco24I | GRGCYC | 1 cut(s) | 1816 |
| Eco32I | GATATC | 4 cut(s) | 571, 772, 961, 1150 |
| Eco47I | GGWCC | 2 cut(s) | 452, 2474 |
| Eco57I | CTGAAG | 2 cut(s) | 1541, 2245 |
| Eco88I | CYCGRG | 1 cut(s) | 281 |
| EcoRI | GAATTC | 2 cut(s) | 1975, 2246 |
| EcoRII | CCWGG | 4 cut(s) | 490, 792, 941, 981 |
| EcoRV | GATATC | 4 cut(s) | 571, 772, 961, 1150 |
| EcoT22I | ATGCAT | 1 cut(s) | 2493 |
| EcoT38I | GRGCYC | 1 cut(s) | 1816 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 522, 554, 1716, 1748, 1929, 1961 |
| FaqI | GGGAC | 1 cut(s) | 981 |
| FauI | CCCGC | 1 cut(s) | 1167 |
| FbaI | TGATCA | 1 cut(s) | 2413 |
| FblI | GTMKAC | 1 cut(s) | 1668 |
| Fnu4HI | GCNGC | 1 cut(s) | 213 |
| FriOI | GRGCYC | 1 cut(s) | 1816 |
| Fsp4HI | GCNGC | 1 cut(s) | 213 |
| FspBI | CTAG | 6 cut(s) | 191, 524, 1809, 2123, 2534, 2674 |
| GlaI | GCGC | 1 cut(s) | 2258 |
| GluI | GCNGC | 1 cut(s) | 213 |
| HaeIII | GGCC | 3 cut(s) | 1741, 1864, 2627 |
| HgaI | GACGC | 1 cut(s) | 2558 |
| HhaI | GCGC | 1 cut(s) | 2259 |
| Hin6I | GCGC | 1 cut(s) | 2257 |
| HinP1I | GCGC | 1 cut(s) | 2257 |
| HincII | GTYRAC | 2 cut(s) | 1631, 1896 |
| HindII | GTYRAC | 2 cut(s) | 1631, 1896 |
| HindIII | AAGCTT | 1 cut(s) | 1919 |
| HinfI | GANTC | 7 cut(s) | 37, 1255, 1601, 1784, 2005, 2141, 2305 |
| HphI | GGTGA | 3 cut(s) | 1189, 1540, 1816 |
| Hpy166II | GTNNAC | 4 cut(s) | 1631, 1669, 1896, 2169 |
| Hpy188III | TCNNGA | 6 cut(s) | 65, 283, 1246, 1259, 1328, 2477 |
| Hpy8I | GTNNAC | 4 cut(s) | 1631, 1669, 1896, 2169 |
| HpyAV | CCTTC | 7 cut(s) | 385, 442, 1354, 1417, 1519, 1652, 2456 |
| HpyCH4III | ACNGT | 6 cut(s) | 22, 295, 1612, 1869, 2578, 2597 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1171, 1585, 1969 |
| HpyF3I | CTNAG | 8 cut(s) | 33, 72, 1050, 1782, 2037, 2274, 2367, 2450 |
| HspAI | GCGC | 1 cut(s) | 2257 |
| Ksp22I | TGATCA | 1 cut(s) | 2413 |
| Lsp1109I | GCAGC | 1 cut(s) | 224 |
| LweI | GCATC | 6 cut(s) | 386, 1161, 1398, 1588, 1972, 2380 |
| MaeI | CTAG | 6 cut(s) | 191, 524, 1809, 2123, 2534, 2674 |
| MaeIII | GTNAC | 3 cut(s) | 129, 289, 2578 |
| MflI | RGATCY | 3 cut(s) | 136, 238, 2379 |
| MhlI | GDGCHC | 1 cut(s) | 1816 |
| MlsI | TGGCCA | 1 cut(s) | 1741 |
| MluNI | TGGCCA | 1 cut(s) | 1741 |
| MlyI | GAGTC | 4 cut(s) | 46, 1793, 2150, 2299 |
| MmeI | TCCRAC | 3 cut(s) | 351, 660, 1542 |
| Mox20I | TGGCCA | 1 cut(s) | 1741 |
| Mph1103I | ATGCAT | 1 cut(s) | 2493 |
| MroXI | GAANNNNTTC | 3 cut(s) | 60, 1728, 2604 |
| MscI | TGGCCA | 1 cut(s) | 1741 |
| MslI | CAYNNNNRTG | 4 cut(s) | 692, 845, 1704, 2469 |
| Msp20I | TGGCCA | 1 cut(s) | 1741 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| MspCI | CTTAAG | 2 cut(s) | 1967, 2375 |
| MspR9I | CCNGG | 4 cut(s) | 492, 794, 943, 983 |
| MvaI | CCWGG | 4 cut(s) | 492, 794, 943, 983 |
| MvnI | CGCG | 2 cut(s) | 2257, 2665 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1171, 1585, 1969 |
| NlaIV | GGNNCC | 3 cut(s) | 138, 453, 2271 |
| NmeAIII | GCCGAG | 1 cut(s) | 2603 |
| NmuCI | GTSAC | 1 cut(s) | 2578 |
| NsiI | ATGCAT | 1 cut(s) | 2493 |
| NspI | RCATGY | 1 cut(s) | 803 |
| NspV | TTCGAA | 1 cut(s) | 1621 |
| PaeR7I | CTCGAG | 1 cut(s) | 281 |
| PagI | TCATGA | 1 cut(s) | 1245 |
| PdmI | GAANNNNTTC | 3 cut(s) | 60, 1728, 2604 |
| PfeI | GAWTC | 3 cut(s) | 1255, 1601, 2005 |
| PkrI | GCNGC | 1 cut(s) | 214 |
| Ple19I | CGATCG | 1 cut(s) | 230 |
| PleI | GAGTC | 4 cut(s) | 45, 1792, 2149, 2299 |
| PpsI | GAGTC | 4 cut(s) | 45, 1792, 2149, 2299 |
| PshBI | ATTAAT | 1 cut(s) | 1674 |
| PsiI | TTATAA | 3 cut(s) | 783, 972, 1346 |
| Psp6I | CCWGG | 4 cut(s) | 490, 792, 941, 981 |
| PspGI | CCWGG | 4 cut(s) | 490, 792, 941, 981 |
| PspN4I | GGNNCC | 3 cut(s) | 138, 453, 2271 |
| PspPI | GGNCC | 2 cut(s) | 452, 2474 |
| PsuI | RGATCY | 3 cut(s) | 136, 238, 2379 |
| PvuI | CGATCG | 1 cut(s) | 230 |
| PvuII | CAGCTG | 1 cut(s) | 215 |
| RsaI | GTAC | 2 cut(s) | 30, 537 |
| RsaNI | GTAC | 2 cut(s) | 29, 536 |
| RseI | CAYNNNNRTG | 4 cut(s) | 692, 845, 1704, 2469 |
| SatI | GCNGC | 1 cut(s) | 213 |
| Sau96I | GGNCC | 2 cut(s) | 452, 2474 |
| SchI | GAGTC | 4 cut(s) | 46, 1793, 2150, 2299 |
| ScrFI | CCNGG | 4 cut(s) | 492, 794, 943, 983 |
| SduI | GDGCHC | 1 cut(s) | 1816 |
| SfaNI | GCATC | 6 cut(s) | 386, 1161, 1398, 1588, 1972, 2380 |
| Sfr274I | CTCGAG | 1 cut(s) | 281 |
| SfuI | TTCGAA | 1 cut(s) | 1621 |
| SinI | GGWCC | 2 cut(s) | 452, 2474 |
| SlaI | CTCGAG | 1 cut(s) | 281 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 692, 845, 1704, 2469 |
| SmlI | CTYRAG | 5 cut(s) | 281, 1583, 1922, 1967, 2375 |
| SmoI | CTYRAG | 5 cut(s) | 281, 1583, 1922, 1967, 2375 |
| SsiI | CCGC | 3 cut(s) | 1174, 1827, 2219 |
| SspI | AATATT | 1 cut(s) | 1114 |
| SspMI | CTAG | 6 cut(s) | 191, 524, 1809, 2123, 2534, 2674 |
| StyD4I | CCNGG | 4 cut(s) | 490, 792, 941, 981 |
| TaaI | ACNGT | 6 cut(s) | 22, 295, 1612, 1869, 2578, 2597 |
| TaqI | TCGA | 7 cut(s) | 230, 282, 1494, 1621, 1748, 1979, 2008 |
| TfiI | GAWTC | 3 cut(s) | 1255, 1601, 2005 |
| TscAI | CASTG | 5 cut(s) | 1895, 2041, 2182, 2221, 2602 |
| TseFI | GTSAC | 1 cut(s) | 2578 |
| TseI | GCWGC | 1 cut(s) | 212 |
| Tsp45I | GTSAC | 1 cut(s) | 2578 |
| TspGWI | ACGGA | 4 cut(s) | 251, 439, 764, 2078 |
| TspRI | CASTG | 5 cut(s) | 1895, 2041, 2182, 2221, 2602 |
| Vha464I | CTTAAG | 2 cut(s) | 1967, 2375 |
| VpaK11BI | GGWCC | 2 cut(s) | 452, 2474 |
| VspI | ATTAAT | 1 cut(s) | 1674 |
| XceI | RCATGY | 1 cut(s) | 803 |
| XhoI | CTCGAG | 1 cut(s) | 281 |
| XmiI | GTMKAC | 1 cut(s) | 1668 |
| XmnI | GAANNNNTTC | 3 cut(s) | 60, 1728, 2604 |
| XspI | CTAG | 6 cut(s) | 191, 524, 1809, 2123, 2534, 2674 |
| Zsp2I | ATGCAT | 1 cut(s) | 2493 |