FvH4_7g26210
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
19873146 .. 19876347
3202 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26210.t1

Sequence Viewer

Length: 1932 bp
ATGAAGCTCAAGTCCTCCATTGCTGAACTTATCTTCCTTTTCCCTATACTCCCTTTCTTATTTTCCTCAGTCATTGCTGACCTCAACTCTGATAAACAAGCCCTCCTTGACTTTGCTGCCAATGTCTTTCATACACAAAAACTCAACTGGAATGGTTCTACACCAGTTTGCTCCTCTTGGATTGGAATCACTTGCAATCTAAACCACACCAGTGTGATTGACATACATCTTCCTGCCATTGGACTCTTTGGCTCAATCCCAAACAACACTATTGGAAAGCTTGATGCTCTTAGAGTCCTTAGCCTCCACTCCAACTTTCTCAATGGAACTCTTCCTTCTGATGTTCTGTCTATTCCTTCATTGAAATATCTCTACCTCCAAAACAACAACTTTTCTGGTGCCATACCTGCTTCTCTCTCCCCCAATCTCATTGTATTAGAGTTATCCTTCAACTCTTTATCTGGGATCATTCCAACCATCATTAGTAACCTGACAAGGCTCGTAGAGTTGAGTCTTCAAAACAATTCTATCTCTGGTCCCATCCCCAACCTGAGCCTCACAGGGCCTAAACTTTTGAACTTGAGCTATAACAACTTGAATGGCTCAATTCCATATTCCCTCCAAAAGTACCCTCATTCCTCATTTCTTGGGAATTCTCTCTTATGTGGGGAACCTCTAAACCATTGTTCTAAGATCTCATCCTCTTCATCACCTTCACCTTCCCCTATTTACCTGCCTGCAGCCTCACCTGTAATCATGGAAAATCGACACACCAAAAAGTTATTTGGCCTAGGGTCTATCATTGCTCTGGCGATTGGGGGAGCTGCTGTGTTCTTTCTTTTGGTCATCATGGGCATCATGTGCTGTTTTAAAAGGACTAGCAAAAGAAGCAGTGGCATGTTGAAAGGGAAGAGTGGTGCCTCTAGTGATGAAAAGACTGATACGAAGTCTATAAGTTTCGGAAGTGGAGTGCAAGCGGCAACAAAGAACAAGCTGTTCTTCTTTGAAGGATGCAATTACAATTTTGATCTTGAGGATCTACTGAGGGCATCCGCTGAAGTTCTTGGAAAAGGAAGTTATGGGACAACCTACAAGGCTGTTTTGGATGAGGAAACAACTGTTGTAGTGAAAAGGTTAAAGGAAGTTGTTTTGGGTAAGAAGGAGTTTGAGCAGCATATGGAGGTTGTGGAGAGGGTTGGAAAGCACCCAAATGTTCTGCCTCCTAAGGCTTATTATTATTCCAGAGATGAGAAGCTTTTGGTCTACAACTACATGCCAGCAGGAAGCTTGTTTGCTCACTTGCATGGAAGCAGGGATGCTGGAAGAATCCCGCTTGATTGGAATTCAAGACTAAAGATAGCTCTTGGAATTGCAAGGGCAATTGCTCACATTCATTCTGAGGGTGGTGTAAAATGCATCCATGGTAACATAAAATCCACCAATGTCCTCCTAACCGAAGAACTTGAGGCTTGCATCTCAGATGTTGGGTTGACTCCTCTAATGAACTTTCCCGTGGCTACATCCATGTCACGAAGAGCTACTGGATACCGAGCACCAGAGGCAATTGACATGCGCAAAATGTCCGACAAATCAGATGTATACAGCTTTGGTGTGCTCCTACTCGAAATGCTGACAGGGAAAACCACACTTCAAAATGCAGGGCACTATGATGATGTTGTGGTTGACCTCCCAAGGTGGGTGAAGTCTGTGGTTCGCGAGGAATGGACTGCTGAGGTTTTCGATTTGGAGTTGCTTAAACAACAAGGCATTGAAGAAGAGATGGTGCAGATGCTGCAGATTGCATTGGCATGTGTAGCAAAGCTACCTGAGTCACGCCCCAAAATGGATGACGTTGTTAGAATGCTAGAGGAATTTCGGCAGTCTGATACCAAGACTAGGCCTTCCTCTGAATCTGAGCTTGATACCCCATGA

Protein Analysis

644

Amino Acids

70.51

Weight (kDa)

7.59

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 66 1.3e-08 Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr PF07714 353 - 622 7e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 353 - 619 3.7e-32 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1574
Acc36I ACCTGC 2 cut(s) 415, 741
AccB1I GGYRCC 2 cut(s) 398, 917
AccI GTMKAC 2 cut(s) 1263, 1599
AccII CGCG 1 cut(s) 1716
AciI CCGC 3 cut(s) 977, 1053, 1331
AclWI GGATC 2 cut(s) 473, 1044
AcsI RAATTY 3 cut(s) 652, 1342, 1871
AcuI CTGAAG 1 cut(s) 1077
AfaI GTAC 1 cut(s) 629
AfiI CCNNNNNNNGG 4 cut(s) 239, 1696, 1843, 1896
AleI CACNNNNGTG 2 cut(s) 210, 212
AloI GAACNNNNNNTCC 2 cut(s) 18, 50
Alw21I GWGCWC 2 cut(s) 1555, 1617
AlwI GGATC 2 cut(s) 473, 1044
AlwNI CAGNNNCTG 1 cut(s) 1792
AoxI GGCC 3 cut(s) 563, 787, 1898
ApeKI GCWGC 5 cut(s) 116, 740, 824, 1171, 1792
ApoI RAATTY 3 cut(s) 652, 1342, 1871
AspA2I CCTAGG 1 cut(s) 790
AspLEI GCGC 1 cut(s) 1575
AspS9I GGNCC 2 cut(s) 536, 563
AsuHPI GGTGA 4 cut(s) 702, 708, 738, 1711
AvaII GGWCC 1 cut(s) 536
AvrII CCTAGG 1 cut(s) 790
AxyI CCTNAGG 1 cut(s) 1224
BaeGI GKGCMC 1 cut(s) 1665
BanI GGYRCC 2 cut(s) 398, 917
BbsI GAAGAC 1 cut(s) 506
Bbv12I GWGCWC 2 cut(s) 1555, 1617
BbvCI CCTCAGC 1 cut(s) 1731
BbvI GCAGC 5 cut(s) 103, 752, 811, 1183, 1779
BccI CCATC 3 cut(s) 485, 548, 1774
BciVI GTATCC 1 cut(s) 1538
BfaI CTAG 5 cut(s) 791, 879, 924, 1865, 1896
BfmI CTRYAG 2 cut(s) 738, 1793
BfuAI ACCTGC 2 cut(s) 415, 741
BfuI GTATCC 1 cut(s) 1538
BglII AGATCT 1 cut(s) 693
BisI GCNGC 6 cut(s) 117, 741, 825, 978, 1172, 1793
BlnI CCTAGG 1 cut(s) 790
BlsI GCNGC 6 cut(s) 118, 742, 826, 979, 1173, 1794
Bme18I GGWCC 1 cut(s) 536
BmgT120I GGNCC 2 cut(s) 536, 563
BmiI GGNNCC 4 cut(s) 400, 538, 672, 919
BmsI GCATC 8 cut(s) 274, 864, 1001, 1058, 1306, 1425, 1482, 1779
BpiI GAAGAC 1 cut(s) 506
Bpu10I CCTNAGC 3 cut(s) 299, 551, 1731
BpuEI CTTGAG 3 cut(s) 601, 1052, 1484
BsaBI GATNNNNATC 1 cut(s) 185
BsaJI CCNNGG 4 cut(s) 790, 1420, 1512, 1691
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 813, 843
Bsc4I CCNNNNNNNGG 4 cut(s) 239, 1696, 1843, 1896
Bse1I ACTGG 4 cut(s) 152, 164, 210, 1546
Bse21I CCTNAGG 1 cut(s) 1224
Bse3DI GCAATG 3 cut(s) 18, 72, 801
Bse8I GATNNNNATC 1 cut(s) 185
BseDI CCNNGG 4 cut(s) 790, 1420, 1512, 1691
BseGI GGATG 9 cut(s) 540, 698, 1016, 1049, 1111, 1321, 1416, 1520, 1852
BseJI GATNNNNATC 1 cut(s) 185
BseLI CCNNNNNNNGG 4 cut(s) 239, 1696, 1843, 1896
BseMI GCAATG 3 cut(s) 18, 72, 801
BseMII CTCAG 8 cut(s) 81, 542, 1034, 1389, 1491, 1722, 1818, 1905
BseNI ACTGG 4 cut(s) 152, 164, 210, 1546
BseRI GAGGAG 2 cut(s) 163, 1485
BseSI GKGCMC 1 cut(s) 1665
BseXI GCAGC 5 cut(s) 103, 752, 811, 1183, 1779
BsgI GTGCAG 1 cut(s) 1805
Bsh1236I CGCG 1 cut(s) 1716
BshFI GGCC 3 cut(s) 565, 789, 1900
BshNI GGYRCC 2 cut(s) 398, 917
BsiHKAI GWGCWC 2 cut(s) 1555, 1617
BslFI GGGAC 2 cut(s) 522, 1096
BslI CCNNNNNNNGG 4 cut(s) 239, 1696, 1843, 1896
BsmFI GGGAC 2 cut(s) 522, 1096
BsmI GAATGC 1 cut(s) 1866
BsnI GGCC 3 cut(s) 565, 789, 1900
Bsp1286I GDGCHC 3 cut(s) 1555, 1617, 1665
Bsp143I GATC 4 cut(s) 465, 693, 1027, 1036
Bsp19I CCATGG 1 cut(s) 1420
Bsp68I TCGCGA 1 cut(s) 1716
BspACI CCGC 3 cut(s) 977, 1053, 1331
BspANI GGCC 3 cut(s) 565, 789, 1900
BspCNI CTCAG 8 cut(s) 80, 543, 1035, 1390, 1490, 1723, 1819, 1906
BspFNI CGCG 1 cut(s) 1716
BspLI GGNNCC 4 cut(s) 400, 538, 672, 919
BspMAI CTGCAG 2 cut(s) 742, 1797
BspMI ACCTGC 2 cut(s) 415, 741
BspPI GGATC 2 cut(s) 473, 1044
BspQI GCTCTTC 1 cut(s) 1528
BspT107I GGYRCC 2 cut(s) 398, 917
BsrDI GCAATG 3 cut(s) 18, 72, 801
BsrI ACTGG 4 cut(s) 152, 164, 210, 1546
BssECI CCNNGG 4 cut(s) 790, 1420, 1512, 1691
BssMI GATC 4 cut(s) 465, 693, 1027, 1036
BssNAI GTATAC 1 cut(s) 1600
BssT1I CCWWGG 3 cut(s) 790, 1420, 1691
Bst1107I GTATAC 1 cut(s) 1600
Bst4CI ACNGT 1 cut(s) 1120
Bst6I CTCTTC 5 cut(s) 336, 709, 905, 1528, 1770
BstAPI GCANNNNNTGC 2 cut(s) 861, 1792
BstC8I GCNNGC 4 cut(s) 738, 975, 1278, 1471
BstDSI CCRYGG 2 cut(s) 1420, 1512
BstF5I GGATG 9 cut(s) 540, 698, 1016, 1049, 1111, 1321, 1416, 1520, 1852
BstFNI CGCG 1 cut(s) 1716
BstHHI GCGC 1 cut(s) 1575
BstKTI GATC 4 cut(s) 468, 696, 1030, 1039
BstMBI GATC 4 cut(s) 465, 693, 1027, 1036
BstMWI GCNNNNNNNGC 6 cut(s) 407, 861, 888, 1559, 1792, 1814
BstNSI RCATGY 4 cut(s) 901, 1276, 1573, 1812
BstSFI CTRYAG 2 cut(s) 738, 1793
BstSLI GKGCMC 1 cut(s) 1665
BstUI CGCG 1 cut(s) 1716
BstV1I GCAGC 5 cut(s) 103, 752, 811, 1183, 1779
BstV2I GAAGAC 1 cut(s) 506
BstX2I RGATCY 2 cut(s) 693, 1036
BstYI RGATCY 2 cut(s) 693, 1036
BstZ17I GTATAC 1 cut(s) 1600
Bsu36I CCTNAGG 1 cut(s) 1224
BsuI GTATCC 1 cut(s) 1538
BsuRI GGCC 3 cut(s) 565, 789, 1900
BtgI CCRYGG 2 cut(s) 1420, 1512
BtsCI GGATG 9 cut(s) 540, 698, 1016, 1049, 1111, 1321, 1416, 1520, 1852
BtsI GCAGTG 1 cut(s) 898
BtsIMutI CAGTG 2 cut(s) 217, 898
BtuMI TCGCGA 1 cut(s) 1716
BveI ACCTGC 2 cut(s) 415, 741
Cac8I GCNNGC 4 cut(s) 738, 975, 1278, 1471
CaiI CAGNNNCTG 1 cut(s) 1792
CfoI GCGC 1 cut(s) 1575
Cfr13I GGNCC 2 cut(s) 536, 563
Csp6I GTAC 1 cut(s) 628
CviQI GTAC 1 cut(s) 628
DpnI GATC 4 cut(s) 467, 695, 1029, 1038
DpnII GATC 4 cut(s) 465, 693, 1027, 1036
DraI TTTAAA 1 cut(s) 871
Eam1104I CTCTTC 5 cut(s) 336, 709, 905, 1528, 1770
EarI CTCTTC 5 cut(s) 336, 709, 905, 1528, 1770
Eco130I CCWWGG 3 cut(s) 790, 1420, 1691
Eco147I AGGCCT 1 cut(s) 1900
Eco47I GGWCC 1 cut(s) 536
Eco57I CTGAAG 1 cut(s) 1077
Eco81I CCTNAGG 1 cut(s) 1224
EcoO109I RGGNCCY 1 cut(s) 563
EcoRI GAATTC 2 cut(s) 652, 1342
EcoT14I CCWWGG 3 cut(s) 790, 1420, 1691
EcoT22I ATGCAT 1 cut(s) 1418
ErhI CCWWGG 3 cut(s) 790, 1420, 1691
FalI AAGNNNNNCTT 4 cut(s) 90, 122, 983, 1015
FaqI GGGAC 2 cut(s) 522, 1096
FauI CCCGC 1 cut(s) 1338
FauNDI CATATG 1 cut(s) 1176
FblI GTMKAC 2 cut(s) 1263, 1599
Fnu4HI GCNGC 6 cut(s) 117, 741, 825, 978, 1172, 1793
FokI GGATG 9 cut(s) 527, 685, 1023, 1036, 1118, 1328, 1403, 1507, 1859
Fsp4HI GCNGC 6 cut(s) 117, 741, 825, 978, 1172, 1793
FspBI CTAG 5 cut(s) 791, 879, 924, 1865, 1896
FspI TGCGCA 1 cut(s) 1574
GlaI GCGC 1 cut(s) 1574
GluI GCNGC 6 cut(s) 117, 741, 825, 978, 1172, 1793
HaeIII GGCC 3 cut(s) 565, 789, 1900
HhaI GCGC 1 cut(s) 1575
Hin6I GCGC 1 cut(s) 1573
HinP1I GCGC 1 cut(s) 1573
HincII GTYRAC 2 cut(s) 1491, 1684
HindII GTYRAC 2 cut(s) 1491, 1684
HindIII AAGCTT 3 cut(s) 278, 1253, 1285
HinfI GANTC 8 cut(s) 186, 243, 294, 511, 1326, 1492, 1829, 1910
HphI GGTGA 4 cut(s) 702, 708, 738, 1711
Hpy166II GTNNAC 4 cut(s) 1264, 1491, 1600, 1684
Hpy188III TCNNGA 5 cut(s) 1031, 1242, 1347, 1530, 1715
Hpy8I GTNNAC 4 cut(s) 1264, 1491, 1600, 1684
HpyAV CCTTC 8 cut(s) 345, 366, 457, 723, 729, 1001, 1153, 1911
HpyCH4III ACNGT 1 cut(s) 1120
HpyCH4IV ACGT 1 cut(s) 1851
HpyF10VI GCNNNNNNNGC 6 cut(s) 407, 861, 888, 1559, 1792, 1814
HpySE526I ACGT 1 cut(s) 1851
HspAI GCGC 1 cut(s) 1573
Kzo9I GATC 4 cut(s) 465, 693, 1027, 1036
LguI GCTCTTC 1 cut(s) 1528
LmnI GCTCC 3 cut(s) 176, 821, 1620
Lsp1109I GCAGC 5 cut(s) 103, 752, 811, 1183, 1779
LweI GCATC 8 cut(s) 274, 864, 1001, 1058, 1306, 1425, 1482, 1779
MaeI CTAG 5 cut(s) 791, 879, 924, 1865, 1896
MaeII ACGT 1 cut(s) 1851
MaeIII GTNAC 4 cut(s) 485, 1424, 1527, 1830
MalI GATC 4 cut(s) 467, 695, 1029, 1038
MboI GATC 4 cut(s) 465, 693, 1027, 1036
MfeI CAATTG 2 cut(s) 1380, 1563
MflI RGATCY 2 cut(s) 693, 1036
MhlI GDGCHC 3 cut(s) 1555, 1617, 1665
MlyI GAGTC 5 cut(s) 237, 303, 520, 1486, 1838
MmeI TCCRAC 4 cut(s) 336, 497, 1177, 1608
Mph1103I ATGCAT 1 cut(s) 1418
MseI TTAA 3 cut(s) 870, 1136, 1755
MslI CAYNNNNRTG 6 cut(s) 210, 212, 1209, 1302, 1668, 1807
MspA1I CMGCKG 1 cut(s) 1055
MunI CAATTG 2 cut(s) 1380, 1563
Mva1269I GAATGC 1 cut(s) 1866
MvnI CGCG 1 cut(s) 1716
MwoI GCNNNNNNNGC 6 cut(s) 407, 861, 888, 1559, 1792, 1814
NcoI CCATGG 1 cut(s) 1420
NdeI CATATG 1 cut(s) 1176
NdeII GATC 4 cut(s) 465, 693, 1027, 1036
NlaIV GGNNCC 4 cut(s) 400, 538, 672, 919
NmuCI GTSAC 2 cut(s) 1527, 1830
NruI TCGCGA 1 cut(s) 1716
NsbI TGCGCA 1 cut(s) 1574
NsiI ATGCAT 1 cut(s) 1418
NspI RCATGY 4 cut(s) 901, 1276, 1573, 1812
OliI CACNNNNGTG 2 cut(s) 210, 212
PceI AGGCCT 1 cut(s) 1900
PciSI GCTCTTC 1 cut(s) 1528
PctI GAATGC 1 cut(s) 1866
PfeI GAWTC 3 cut(s) 186, 1326, 1910
PkrI GCNGC 6 cut(s) 118, 742, 826, 979, 1173, 1794
PleI GAGTC 5 cut(s) 237, 302, 519, 1486, 1837
PpsI GAGTC 5 cut(s) 237, 302, 519, 1486, 1837
PspN4I GGNNCC 4 cut(s) 400, 538, 672, 919
PspPI GGNCC 2 cut(s) 536, 563
PstI CTGCAG 2 cut(s) 742, 1797
PstNI CAGNNNCTG 1 cut(s) 1792
PsuI RGATCY 2 cut(s) 693, 1036
RruI TCGCGA 1 cut(s) 1716
RsaI GTAC 1 cut(s) 629
RsaNI GTAC 1 cut(s) 628
RseI CAYNNNNRTG 6 cut(s) 210, 212, 1209, 1302, 1668, 1807
SapI GCTCTTC 1 cut(s) 1528
SaqAI TTAA 3 cut(s) 870, 1136, 1755
SatI GCNGC 6 cut(s) 117, 741, 825, 978, 1172, 1793
Sau3AI GATC 4 cut(s) 465, 693, 1027, 1036
Sau96I GGNCC 2 cut(s) 536, 563
SchI GAGTC 5 cut(s) 237, 303, 520, 1486, 1838
SduI GDGCHC 3 cut(s) 1555, 1617, 1665
SfaNI GCATC 8 cut(s) 274, 864, 1001, 1058, 1306, 1425, 1482, 1779
SfcI CTRYAG 2 cut(s) 738, 1793
SinI GGWCC 1 cut(s) 536
SmiMI CAYNNNNRTG 6 cut(s) 210, 212, 1209, 1302, 1668, 1807
SmlI CTYRAG 4 cut(s) 8, 580, 1031, 1463
SmoI CTYRAG 4 cut(s) 8, 580, 1031, 1463
SseBI AGGCCT 1 cut(s) 1900
SsiI CCGC 3 cut(s) 977, 1053, 1331
SspMI CTAG 5 cut(s) 791, 879, 924, 1865, 1896
StuI AGGCCT 1 cut(s) 1900
StyI CCWWGG 3 cut(s) 790, 1420, 1691
TaaI ACNGT 1 cut(s) 1120
TaiI ACGT 1 cut(s) 1854
TaqI TCGA 3 cut(s) 766, 1623, 1740
TauI GCSGC 1 cut(s) 980
TfiI GAWTC 3 cut(s) 186, 1326, 1910
Tru1I TTAA 3 cut(s) 870, 1136, 1755
Tru9I TTAA 3 cut(s) 870, 1136, 1755
TscAI CASTG 2 cut(s) 217, 898
TseFI GTSAC 2 cut(s) 1527, 1830
TseI GCWGC 5 cut(s) 116, 740, 824, 1171, 1792
Tsp45I GTSAC 2 cut(s) 1527, 1830
TspDTI ATGAA 7 cut(s) 17, 119, 348, 696, 945, 1382, 1517
TspRI CASTG 2 cut(s) 217, 898
VpaK11BI GGWCC 1 cut(s) 536
XapI RAATTY 3 cut(s) 652, 1342, 1871
XceI RCATGY 4 cut(s) 901, 1276, 1573, 1812
XmaJI CCTAGG 1 cut(s) 790
XmiI GTMKAC 2 cut(s) 1263, 1599
XspI CTAG 5 cut(s) 791, 879, 924, 1865, 1896
Zsp2I ATGCAT 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.