Plant invertase/pectin methylesterase inhibitor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45220 |
| fragaria_vesca | FvH4_7g11320 FvH4_7g27760 |
| malus_domestica | MD02G1207900.v1.1 MD07G1255000.v1.1 MD11G1195500.v1.1 |
| prunus_persica | Prupe.2G141000_v2.0.a1 Prupe.2G278200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0349521 RchiOBHm_Chr1g0374551 |
| rosa_laevigata | RLG00000026729 RLG00000028541 RLG00000028544 |
| rosa_multiflora | Rmu_sc0002495.1_g000016 Rmu_sc0002495.1_g000029 Rmu_sc0004947.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00283410 Rroxscaffold_4G00305490 |
| rosa_rugosa | Rorug01G0204300 Rorug01G0384100 |
| rosa_samantha | Rh1AG394800 Rh1BG187700 Rh1BG359500 Rh1CG206500 Rh1CG372600 Rh1DG217200 Rh1DG390100 |
| rosa_wichuraiana | Rw1G018840 Rw1G018870 Rw1G035010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 636 |
| AccB1I | GGYRCC | 1 cut(s) | 1058 |
| AccBSI | CCGCTC | 2 cut(s) | 469, 699 |
| AccI | GTMKAC | 3 cut(s) | 348, 608, 1065 |
| AccII | CGCG | 2 cut(s) | 426, 1088 |
| AccIII | TCCGGA | 1 cut(s) | 906 |
| AclWI | GGATC | 2 cut(s) | 1192, 1325 |
| AcoI | YGGCCR | 2 cut(s) | 615, 1218 |
| AcuI | CTGAAG | 1 cut(s) | 587 |
| AfaI | GTAC | 5 cut(s) | 343, 397, 1168, 1294, 1394 |
| AfeI | AGCGCT | 1 cut(s) | 945 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 40, 556, 819, 1133, 1237, 1415, 1529 |
| AflIII | ACRYGT | 1 cut(s) | 721 |
| AgeI | ACCGGT | 2 cut(s) | 812, 1237 |
| AgsI | TTSAA | 3 cut(s) | 190, 766, 850 |
| AhlI | ACTAGT | 1 cut(s) | 1460 |
| AjnI | CCWGG | 2 cut(s) | 1314, 1408 |
| Alw21I | GWGCWC | 1 cut(s) | 535 |
| Alw26I | GTCTC | 1 cut(s) | 490 |
| AlwI | GGATC | 2 cut(s) | 1192, 1325 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 959 |
| Aor13HI | TCCGGA | 1 cut(s) | 906 |
| Aor51HI | AGCGCT | 1 cut(s) | 945 |
| AoxI | GGCC | 5 cut(s) | 615, 1162, 1218, 1271, 1549 |
| ApeKI | GCWGC | 4 cut(s) | 102, 122, 683, 1519 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1058, 1090 |
| AsiGI | ACCGGT | 2 cut(s) | 812, 1237 |
| AspA2I | CCTAGG | 1 cut(s) | 1264 |
| AspLEI | GCGC | 4 cut(s) | 428, 637, 946, 959 |
| AspS9I | GGNCC | 4 cut(s) | 294, 920, 1093, 1406 |
| AsuC2I | CCSGG | 2 cut(s) | 430, 585 |
| AsuHPI | GGTGA | 2 cut(s) | 802, 1252 |
| AsuII | TTCGAA | 1 cut(s) | 990 |
| AvaII | GGWCC | 4 cut(s) | 294, 920, 1093, 1406 |
| AvrII | CCTAGG | 1 cut(s) | 1264 |
| BaeGI | GKGCMC | 1 cut(s) | 1539 |
| BanI | GGYRCC | 1 cut(s) | 1058 |
| BauI | CACGAG | 1 cut(s) | 891 |
| BbsI | GAAGAC | 2 cut(s) | 964, 1286 |
| Bbv12I | GWGCWC | 1 cut(s) | 535 |
| BbvI | GCAGC | 4 cut(s) | 114, 134, 670, 1506 |
| BccI | CCATC | 7 cut(s) | 173, 209, 332, 671, 782, 872, 1349 |
| BceAI | ACGGC | 4 cut(s) | 923, 1072, 1149, 1258 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 355, 389 |
| BciT130I | CCWGG | 2 cut(s) | 1316, 1410 |
| BclI | TGATCA | 1 cut(s) | 1242 |
| BcnI | CCSGG | 2 cut(s) | 430, 585 |
| BcoDI | GTCTC | 1 cut(s) | 490 |
| BcuI | ACTAGT | 1 cut(s) | 1460 |
| BfaI | CTAG | 3 cut(s) | 254, 1265, 1461 |
| BfmI | CTRYAG | 1 cut(s) | 120 |
| BfoI | RGCGCY | 2 cut(s) | 947, 960 |
| BglII | AGATCT | 1 cut(s) | 797 |
| BlnI | CCTAGG | 1 cut(s) | 1264 |
| BlpI | GCTNAGC | 1 cut(s) | 14 |
| BmcAI | AGTACT | 1 cut(s) | 397 |
| Bme1390I | CCNGG | 4 cut(s) | 430, 585, 1316, 1410 |
| Bme18I | GGWCC | 4 cut(s) | 294, 920, 1093, 1406 |
| BmgT120I | GGNCC | 4 cut(s) | 294, 920, 1093, 1406 |
| BmiI | GGNNCC | 2 cut(s) | 1060, 1407 |
| BmrFI | CCNGG | 4 cut(s) | 430, 585, 1316, 1410 |
| BmsI | GCATC | 1 cut(s) | 670 |
| BpiI | GAAGAC | 2 cut(s) | 964, 1286 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 362, 394 |
| BpmI | CTGGAG | 1 cut(s) | 519 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 14 |
| Bpu14I | TTCGAA | 1 cut(s) | 990 |
| BpuEI | CTTGAG | 1 cut(s) | 773 |
| BpuMI | CCSGG | 2 cut(s) | 430, 585 |
| BsaAI | YACGTR | 2 cut(s) | 722, 1292 |
| BsaJI | CCNNGG | 5 cut(s) | 39, 1086, 1159, 1264, 1274 |
| BsaWI | WCCGGW | 4 cut(s) | 812, 872, 906, 1237 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 470, 500, 688, 718 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 40, 556, 819, 1133, 1237, 1415, 1529 |
| Bse118I | RCCGGY | 4 cut(s) | 83, 613, 812, 1237 |
| Bse1I | ACTGG | 3 cut(s) | 69, 101, 1534 |
| Bse3DI | GCAATG | 2 cut(s) | 885, 1500 |
| BseAI | TCCGGA | 1 cut(s) | 906 |
| BseBI | CCWGG | 2 cut(s) | 1316, 1410 |
| BseDI | CCNNGG | 5 cut(s) | 39, 1086, 1159, 1264, 1274 |
| BseGI | GGATG | 4 cut(s) | 165, 201, 685, 1360 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 40, 556, 819, 1133, 1237, 1415, 1529 |
| BseMI | GCAATG | 2 cut(s) | 885, 1500 |
| BseMII | CTCAG | 2 cut(s) | 383, 981 |
| BseNI | ACTGG | 3 cut(s) | 69, 101, 1534 |
| BseRI | GAGGAG | 2 cut(s) | 323, 709 |
| BseSI | GKGCMC | 1 cut(s) | 1539 |
| BseX3I | CGGCCG | 1 cut(s) | 615 |
| BseXI | GCAGC | 4 cut(s) | 114, 134, 670, 1506 |
| BseYI | CCCAGC | 1 cut(s) | 1337 |
| BsgI | GTGCAG | 1 cut(s) | 121 |
| Bsh1236I | CGCG | 2 cut(s) | 426, 1088 |
| Bsh1285I | CGRYCG | 1 cut(s) | 618 |
| BshFI | GGCC | 5 cut(s) | 617, 1164, 1220, 1273, 1551 |
| BshNI | GGYRCC | 1 cut(s) | 1058 |
| BshTI | ACCGGT | 2 cut(s) | 812, 1237 |
| BsiEI | CGRYCG | 1 cut(s) | 618 |
| BsiHKAI | GWGCWC | 1 cut(s) | 535 |
| BsiSI | CCGG | 9 cut(s) | 84, 429, 585, 614, 813, 820, 873, 907, 1238 |
| BsiWI | CGTACG | 1 cut(s) | 1292 |
| BslFI | GGGAC | 2 cut(s) | 1419, 1432 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 40, 556, 819, 1133, 1237, 1415, 1529 |
| BsmAI | GTCTC | 1 cut(s) | 490 |
| BsmBI | CGTCTC | 1 cut(s) | 490 |
| BsmFI | GGGAC | 2 cut(s) | 1419, 1432 |
| BsmI | GAATGC | 1 cut(s) | 1049 |
| BsnI | GGCC | 5 cut(s) | 617, 1164, 1220, 1273, 1551 |
| Bsp119I | TTCGAA | 1 cut(s) | 990 |
| Bsp1286I | GDGCHC | 2 cut(s) | 535, 1539 |
| Bsp13I | TCCGGA | 1 cut(s) | 906 |
| Bsp143I | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 14 |
| BspANI | GGCC | 5 cut(s) | 617, 1164, 1220, 1273, 1551 |
| BspCNI | CTCAG | 2 cut(s) | 384, 980 |
| BspEI | TCCGGA | 1 cut(s) | 906 |
| BspFNI | CGCG | 2 cut(s) | 426, 1088 |
| BspLI | GGNNCC | 2 cut(s) | 1060, 1407 |
| BspMAI | CTGCAG | 1 cut(s) | 124 |
| BspPI | GGATC | 2 cut(s) | 1192, 1325 |
| BspT104I | TTCGAA | 1 cut(s) | 990 |
| BspT107I | GGYRCC | 1 cut(s) | 1058 |
| BsrBI | CCGCTC | 2 cut(s) | 469, 699 |
| BsrDI | GCAATG | 2 cut(s) | 885, 1500 |
| BsrFI | RCCGGY | 4 cut(s) | 83, 613, 812, 1237 |
| BsrI | ACTGG | 3 cut(s) | 69, 101, 1534 |
| BssAI | RCCGGY | 4 cut(s) | 83, 613, 812, 1237 |
| BssECI | CCNNGG | 5 cut(s) | 39, 1086, 1159, 1264, 1274 |
| BssMI | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| BssSI | CACGAG | 1 cut(s) | 891 |
| BssT1I | CCWWGG | 3 cut(s) | 39, 1159, 1264 |
| Bst2BI | CACGAG | 1 cut(s) | 891 |
| Bst2UI | CCWGG | 2 cut(s) | 1316, 1410 |
| Bst4CI | ACNGT | 9 cut(s) | 341, 346, 524, 862, 980, 1063, 1297, 1322, 1489 |
| Bst6I | CTCTTC | 1 cut(s) | 686 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 863, 1232 |
| BstBAI | YACGTR | 2 cut(s) | 722, 1292 |
| BstBI | TTCGAA | 1 cut(s) | 990 |
| BstC8I | GCNNGC | 2 cut(s) | 127, 1524 |
| BstDEI | CTNAG | 4 cut(s) | 14, 88, 392, 967 |
| BstDSI | CCRYGG | 2 cut(s) | 1086, 1274 |
| BstEII | GGTNACC | 2 cut(s) | 868, 1493 |
| BstF5I | GGATG | 4 cut(s) | 165, 201, 685, 1360 |
| BstFNI | CGCG | 2 cut(s) | 426, 1088 |
| BstH2I | RGCGCY | 2 cut(s) | 947, 960 |
| BstHHI | GCGC | 4 cut(s) | 428, 637, 946, 959 |
| BstKTI | GATC | 7 cut(s) | 800, 953, 964, 1113, 1200, 1245, 1333 |
| BstMAI | GTCTC | 1 cut(s) | 490 |
| BstMBI | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| BstMCI | CGRYCG | 1 cut(s) | 618 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 131, 140, 388, 680, 863, 993, 1232 |
| BstNI | CCWGG | 2 cut(s) | 1316, 1410 |
| BstNSI | RCATGY | 1 cut(s) | 423 |
| BstPI | GGTNACC | 2 cut(s) | 868, 1493 |
| BstSCI | CCNGG | 4 cut(s) | 428, 583, 1314, 1408 |
| BstSFI | CTRYAG | 1 cut(s) | 120 |
| BstSLI | GKGCMC | 1 cut(s) | 1539 |
| BstUI | CGCG | 2 cut(s) | 426, 1088 |
| BstV1I | GCAGC | 4 cut(s) | 114, 134, 670, 1506 |
| BstV2I | GAAGAC | 2 cut(s) | 964, 1286 |
| BstX2I | RGATCY | 1 cut(s) | 797 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 628, 1341 |
| BstYI | RGATCY | 1 cut(s) | 797 |
| BstZI | CGGCCG | 1 cut(s) | 615 |
| BsuRI | GGCC | 5 cut(s) | 617, 1164, 1220, 1273, 1551 |
| BtgI | CCRYGG | 2 cut(s) | 1086, 1274 |
| BtsCI | GGATG | 4 cut(s) | 165, 201, 685, 1360 |
| BtsI | GCAGTG | 2 cut(s) | 546, 1152 |
| BtsIMutI | CAGTG | 3 cut(s) | 76, 546, 1152 |
| Cac8I | GCNNGC | 2 cut(s) | 127, 1524 |
| CaiI | CAGNNNCTG | 1 cut(s) | 959 |
| CfoI | GCGC | 4 cut(s) | 428, 637, 946, 959 |
| Cfr10I | RCCGGY | 4 cut(s) | 83, 613, 812, 1237 |
| Cfr13I | GGNCC | 4 cut(s) | 294, 920, 1093, 1406 |
| Cfr42I | CCGCGG | 1 cut(s) | 1089 |
| CsiI | ACCWGGT | 1 cut(s) | 1408 |
| Csp6I | GTAC | 5 cut(s) | 342, 396, 1167, 1293, 1393 |
| CspAI | ACCGGT | 2 cut(s) | 812, 1237 |
| CviAII | CATG | 9 cut(s) | 146, 291, 387, 420, 472, 1108, 1129, 1216, 1515 |
| CviQI | GTAC | 5 cut(s) | 342, 396, 1167, 1293, 1393 |
| DdeI | CTNAG | 4 cut(s) | 14, 88, 392, 967 |
| DpnI | GATC | 7 cut(s) | 799, 952, 963, 1112, 1199, 1244, 1332 |
| DpnII | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| EaeI | YGGCCR | 2 cut(s) | 615, 1218 |
| EagI | CGGCCG | 1 cut(s) | 615 |
| Eam1104I | CTCTTC | 1 cut(s) | 686 |
| EarI | CTCTTC | 1 cut(s) | 686 |
| EclXI | CGGCCG | 1 cut(s) | 615 |
| Eco130I | CCWWGG | 3 cut(s) | 39, 1159, 1264 |
| Eco47I | GGWCC | 4 cut(s) | 294, 920, 1093, 1406 |
| Eco47III | AGCGCT | 1 cut(s) | 945 |
| Eco52I | CGGCCG | 1 cut(s) | 615 |
| Eco57I | CTGAAG | 1 cut(s) | 587 |
| Eco91I | GGTNACC | 2 cut(s) | 868, 1493 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1406 |
| EcoO65I | GGTNACC | 2 cut(s) | 868, 1493 |
| EcoRII | CCWGG | 2 cut(s) | 1314, 1408 |
| EcoT14I | CCWWGG | 3 cut(s) | 39, 1159, 1264 |
| ErhI | CCWWGG | 3 cut(s) | 39, 1159, 1264 |
| Esp3I | CGTCTC | 1 cut(s) | 490 |
| FaeI | CATG | 9 cut(s) | 149, 294, 390, 423, 475, 1111, 1132, 1219, 1518 |
| FaqI | GGGAC | 2 cut(s) | 1419, 1432 |
| FatI | CATG | 9 cut(s) | 145, 290, 386, 419, 471, 1107, 1128, 1215, 1514 |
| FauI | CCCGC | 1 cut(s) | 1531 |
| FbaI | TGATCA | 1 cut(s) | 1242 |
| FblI | GTMKAC | 3 cut(s) | 348, 608, 1065 |
| FokI | GGATG | 4 cut(s) | 152, 188, 692, 1367 |
| FspBI | CTAG | 3 cut(s) | 254, 1265, 1461 |
| FspI | TGCGCA | 1 cut(s) | 636 |
| GlaI | GCGC | 4 cut(s) | 427, 636, 945, 958 |
| GsaI | CCCAGC | 1 cut(s) | 1341 |
| GsuI | CTGGAG | 1 cut(s) | 519 |
| HaeII | RGCGCY | 2 cut(s) | 947, 960 |
| HaeIII | GGCC | 5 cut(s) | 617, 1164, 1220, 1273, 1551 |
| HapII | CCGG | 9 cut(s) | 84, 429, 585, 614, 813, 820, 873, 907, 1238 |
| HhaI | GCGC | 4 cut(s) | 428, 637, 946, 959 |
| Hin1II | CATG | 9 cut(s) | 149, 294, 390, 423, 475, 1111, 1132, 1219, 1518 |
| Hin6I | GCGC | 4 cut(s) | 426, 635, 944, 957 |
| HinP1I | GCGC | 4 cut(s) | 426, 635, 944, 957 |
| HincII | GTYRAC | 1 cut(s) | 349 |
| HindII | GTYRAC | 1 cut(s) | 349 |
| HindIII | AAGCTT | 1 cut(s) | 672 |
| HinfI | GANTC | 4 cut(s) | 320, 377, 1205, 1212 |
| HpaII | CCGG | 9 cut(s) | 84, 429, 585, 614, 813, 820, 873, 907, 1238 |
| HphI | GGTGA | 2 cut(s) | 802, 1252 |
| Hpy166II | GTNNAC | 5 cut(s) | 349, 609, 739, 1066, 1485 |
| Hpy188III | TCNNGA | 4 cut(s) | 190, 907, 1209, 1255 |
| Hpy8I | GTNNAC | 5 cut(s) | 349, 609, 739, 1066, 1485 |
| Hpy99I | CGWCG | 1 cut(s) | 844 |
| HpyAV | CCTTC | 3 cut(s) | 986, 1263, 1549 |
| HpyCH4III | ACNGT | 9 cut(s) | 341, 346, 524, 862, 980, 1063, 1297, 1322, 1489 |
| HpyCH4IV | ACGT | 7 cut(s) | 483, 624, 721, 1027, 1259, 1283, 1291 |
| HpyCH4V | TGCA | 8 cut(s) | 102, 122, 129, 267, 366, 857, 1107, 1235 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 131, 140, 388, 680, 863, 993, 1232 |
| HpyF3I | CTNAG | 4 cut(s) | 14, 88, 392, 967 |
| HpySE526I | ACGT | 7 cut(s) | 483, 624, 721, 1027, 1259, 1283, 1291 |
| Hsp92II | CATG | 9 cut(s) | 149, 294, 390, 423, 475, 1111, 1132, 1219, 1518 |
| HspAI | GCGC | 4 cut(s) | 426, 635, 944, 957 |
| Kpn2I | TCCGGA | 1 cut(s) | 906 |
| Ksp22I | TGATCA | 1 cut(s) | 1242 |
| KspI | CCGCGG | 1 cut(s) | 1089 |
| Kzo9I | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| LmnI | GCTCC | 3 cut(s) | 538, 696, 951 |
| Lsp1109I | GCAGC | 4 cut(s) | 114, 134, 670, 1506 |
| LweI | GCATC | 1 cut(s) | 670 |
| MabI | ACCWGGT | 1 cut(s) | 1408 |
| MaeI | CTAG | 3 cut(s) | 254, 1265, 1461 |
| MaeII | ACGT | 7 cut(s) | 483, 624, 721, 1027, 1259, 1283, 1291 |
| MaeIII | GTNAC | 7 cut(s) | 541, 650, 868, 1079, 1310, 1358, 1493 |
| MalI | GATC | 7 cut(s) | 799, 952, 963, 1112, 1199, 1244, 1332 |
| MbiI | CCGCTC | 2 cut(s) | 469, 699 |
| MboI | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| MboII | GAAGA | 6 cut(s) | 329, 606, 703, 778, 964, 1291 |
| MflI | RGATCY | 1 cut(s) | 797 |
| MhlI | GDGCHC | 2 cut(s) | 535, 1539 |
| MluCI | AATT | 2 cut(s) | 1031, 1102 |
| MlyI | GAGTC | 1 cut(s) | 371 |
| MmeI | TCCRAC | 2 cut(s) | 207, 477 |
| MroI | TCCGGA | 1 cut(s) | 906 |
| MseI | TTAA | 3 cut(s) | 579, 759, 1434 |
| MspA1I | CMGCKG | 2 cut(s) | 1088, 1337 |
| MspI | CCGG | 9 cut(s) | 84, 429, 585, 614, 813, 820, 873, 907, 1238 |
| MspR9I | CCNGG | 4 cut(s) | 430, 585, 1316, 1410 |
| Mva1269I | GAATGC | 1 cut(s) | 1049 |
| MvaI | CCWGG | 2 cut(s) | 1316, 1410 |
| MvnI | CGCG | 2 cut(s) | 426, 1088 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 131, 140, 388, 680, 863, 993, 1232 |
| NciI | CCSGG | 2 cut(s) | 430, 585 |
| NdeII | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| NlaIII | CATG | 9 cut(s) | 149, 294, 390, 423, 475, 1111, 1132, 1219, 1518 |
| NlaIV | GGNNCC | 2 cut(s) | 1060, 1407 |
| NmuCI | GTSAC | 1 cut(s) | 541 |
| NsbI | TGCGCA | 1 cut(s) | 636 |
| NspI | RCATGY | 1 cut(s) | 423 |
| NspV | TTCGAA | 1 cut(s) | 990 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1256 |
| PctI | GAATGC | 1 cut(s) | 1049 |
| PfeI | GAWTC | 3 cut(s) | 320, 1205, 1212 |
| Pfl23II | CGTACG | 1 cut(s) | 1292 |
| PinAI | ACCGGT | 2 cut(s) | 812, 1237 |
| PleI | GAGTC | 1 cut(s) | 371 |
| PpsI | GAGTC | 1 cut(s) | 371 |
| Ppu21I | YACGTR | 2 cut(s) | 722, 1292 |
| PpuMI | RGGWCCY | 1 cut(s) | 1406 |
| Psp5II | RGGWCCY | 1 cut(s) | 1406 |
| Psp6I | CCWGG | 2 cut(s) | 1314, 1408 |
| PspEI | GGTNACC | 2 cut(s) | 868, 1493 |
| PspFI | CCCAGC | 1 cut(s) | 1337 |
| PspGI | CCWGG | 2 cut(s) | 1314, 1408 |
| PspLI | CGTACG | 1 cut(s) | 1292 |
| PspN4I | GGNNCC | 2 cut(s) | 1060, 1407 |
| PspPI | GGNCC | 4 cut(s) | 294, 920, 1093, 1406 |
| PspPPI | RGGWCCY | 1 cut(s) | 1406 |
| PstI | CTGCAG | 1 cut(s) | 124 |
| PstNI | CAGNNNCTG | 1 cut(s) | 959 |
| PsuI | RGATCY | 1 cut(s) | 797 |
| PvuII | CAGCTG | 1 cut(s) | 1337 |
| RsaI | GTAC | 5 cut(s) | 343, 397, 1168, 1294, 1394 |
| RsaNI | GTAC | 5 cut(s) | 342, 396, 1167, 1293, 1393 |
| SacII | CCGCGG | 1 cut(s) | 1089 |
| SalI | GTCGAC | 1 cut(s) | 347 |
| SaqAI | TTAA | 3 cut(s) | 579, 759, 1434 |
| Sau3AI | GATC | 7 cut(s) | 797, 950, 961, 1110, 1197, 1242, 1330 |
| Sau96I | GGNCC | 4 cut(s) | 294, 920, 1093, 1406 |
| ScaI | AGTACT | 1 cut(s) | 397 |
| SchI | GAGTC | 1 cut(s) | 371 |
| ScrFI | CCNGG | 4 cut(s) | 430, 585, 1316, 1410 |
| SduI | GDGCHC | 2 cut(s) | 535, 1539 |
| SexAI | ACCWGGT | 1 cut(s) | 1408 |
| SfaNI | GCATC | 1 cut(s) | 670 |
| SfcI | CTRYAG | 1 cut(s) | 120 |
| Sfr303I | CCGCGG | 1 cut(s) | 1089 |
| SfuI | TTCGAA | 1 cut(s) | 990 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1237 |
| SgrBI | CCGCGG | 1 cut(s) | 1089 |
| SinI | GGWCC | 4 cut(s) | 294, 920, 1093, 1406 |
| SmlI | CTYRAG | 1 cut(s) | 752 |
| SmoI | CTYRAG | 1 cut(s) | 752 |
| SpeI | ACTAGT | 1 cut(s) | 1460 |
| Sse9I | AATT | 2 cut(s) | 1031, 1102 |
| SspI | AATATT | 1 cut(s) | 772 |
| SspMI | CTAG | 3 cut(s) | 254, 1265, 1461 |
| StyD4I | CCNGG | 4 cut(s) | 428, 583, 1314, 1408 |
| StyI | CCWWGG | 3 cut(s) | 39, 1159, 1264 |
| TaaI | ACNGT | 9 cut(s) | 341, 346, 524, 862, 980, 1063, 1297, 1322, 1489 |
| TaiI | ACGT | 7 cut(s) | 486, 627, 724, 1030, 1262, 1286, 1294 |
| TaqI | TCGA | 8 cut(s) | 348, 375, 414, 527, 839, 990, 1196, 1210 |
| TaqII | GACCGA | 1 cut(s) | 1240 |
| TasI | AATT | 2 cut(s) | 1031, 1102 |
| TatI | WGTACW | 2 cut(s) | 395, 1392 |
| TauI | GCSGC | 7 cut(s) | 290, 426, 620, 689, 1088, 1223, 1226 |
| TfiI | GAWTC | 3 cut(s) | 320, 1205, 1212 |
| Tru1I | TTAA | 3 cut(s) | 579, 759, 1434 |
| Tru9I | TTAA | 3 cut(s) | 579, 759, 1434 |
| TscAI | CASTG | 3 cut(s) | 76, 546, 1159 |
| TseFI | GTSAC | 1 cut(s) | 541 |
| TseI | GCWGC | 4 cut(s) | 102, 122, 683, 1519 |
| Tsp45I | GTSAC | 1 cut(s) | 541 |
| TspDTI | ATGAA | 3 cut(s) | 874, 1060, 1455 |
| TspGWI | ACGGA | 2 cut(s) | 558, 572 |
| TspRI | CASTG | 3 cut(s) | 76, 546, 1159 |
| VpaK11BI | GGWCC | 4 cut(s) | 294, 920, 1093, 1406 |
| XceI | RCATGY | 1 cut(s) | 423 |
| XmaJI | CCTAGG | 1 cut(s) | 1264 |
| XmiI | GTMKAC | 3 cut(s) | 348, 608, 1065 |
| XspI | CTAG | 3 cut(s) | 254, 1265, 1461 |
| ZrmI | AGTACT | 1 cut(s) | 397 |