Rorug01G0384100
NAC Family

Acts in the modification of cell walls via demethylesterification of cell wall pectin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000089
Physical Location & Seq
Forward (+)
49614106 .. 49617001
2896 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0384100.1

Sequence Viewer

Length: 1194 bp
ATGATCAAGGCCAATGGTGGGTTGAATCAAATGAAGCTTGGGATAAGTGATATGGTTGCCGTAGCAAAACTTATGAATGCCACTCTGGTTCTCCCTTTTTTAGATCATAAATCCTTTTGGACCGATCCAAGTGATTTTAAGGACATTTTCAACTGGAAGAATTTCATGGAAGTCTTAAAAGATGATATCATGGTTATAGAGTCACTCCCACCGGAGCTCGCAGACCTGAAGCCTCTCCCCAGGGCTCCAGCTTCCTGGTCCAAGGCTAGTTACTACAGAGGATATATGTCTTCGTTATTGAAGCAGCACAAAGTGCTCAAATTCACGTACACAGATTCCAGACTTACTAATGATCTTGGTGGTTCATTCCAAAAACTACGCTGCCGTGCAATGTTTGAGGCACTGAGATTCTCACCTGAAATCGAACAACTAGCATCAAAGTTGGTTAACAGATTAAAGAACAACAATAGTAGATACATTGCTCTCCATTTAAGATATGAAAAGGACATGCTTTCTTTCACAGGCTGCAGTCACAATCTGACCAAAGACGAAGATAGAGAACTCGCAAAAATAAGGAAACAAACATCTCACTGGAAGCATAAGACGATTAATAGCACCAATCATAGACTCCAAGGGGTATGCCCCATGACCCCAAGAGAGGTTGCTGTGTTTCTTGAAGCAATTGGGTTTCCTTTGGATACAAAAGTTTATGTAGCCGCTGGGAAGATCTACGGGAGAGATGGGATTAGACCTCTGAAAGATAAGTACCCCAATTTATTCTTCCACTCAAATTTAGCGACTGAAGTAGAGTTGCAACCTTTCAAGAACTTGCAGAACCAGCTTGCTGCCTTGGATTACATTGTGGCTTTGGAGAGTGATGTGTTCATTTATTCTTTTGATGGAAATATGGCTAAAGCAATAAAAGGGCATCGACGATTTGAAGGGTTCCGGAAGACGATCAACCCCAACAAACAACAATTTGTGACATTGATTGATAGGTTGGACAACGGAATGATATCTTGGGAAAAATTCTCATCCAAGGTGAAGAAGTTGCATGAAAATCGGATCGGAGCACCATACTCCAGAGTAGCCAGAGGTGACCACAAACTTGAGGAGAACTTTTACGCAAACCCTTTTCCGGGTTGCATCTGTGAAAAGTCCGGAGGCTCATCAACAGTAGCCAAGCAACAATAA

Protein Analysis

397

Amino Acids

45.46

Weight (kDa)

9.51

Isoelectric Point (pI)

32.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 2 - 313 1.5e-95 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 2 cut(s) 948, 1160
AciI CCGC 1 cut(s) 717
AclWI GGATC 2 cut(s) 119, 1073
AcsI RAATTY 4 cut(s) 160, 320, 790, 1028
AcuI CTGAAG 2 cut(s) 248, 822
AdeI CACNNNGTG 1 cut(s) 313
AfaI GTAC 2 cut(s) 329, 767
AfiI CCNNNNNNNGG 4 cut(s) 18, 658, 1138, 1139
AgsI TTSAA 6 cut(s) 25, 151, 301, 677, 823, 941
AjnI CCWGG 2 cut(s) 239, 254
AjuI GAANNNNNNNTTGG 4 cut(s) 764, 796, 1003, 1035
AluBI AGCT 4 cut(s) 37, 217, 251, 841
AluI AGCT 4 cut(s) 37, 217, 251, 841
Alw21I GWGCWC 3 cut(s) 219, 318, 1075
AlwI GGATC 2 cut(s) 119, 1073
Aor13HI TCCGGA 2 cut(s) 948, 1160
AoxI GGCC 1 cut(s) 9
ApeKI GCWGC 4 cut(s) 304, 381, 525, 845
ApoI RAATTY 4 cut(s) 160, 320, 790, 1028
AseI ATTAAT 1 cut(s) 609
Asp700I GAANNNNTTC 1 cut(s) 161
AspS9I GGNCC 2 cut(s) 120, 258
AsuC2I CCSGG 1 cut(s) 1140
AsuHPI GGTGA 3 cut(s) 405, 1054, 1109
AvaII GGWCC 2 cut(s) 120, 258
BaeI ACNNNNGTAYC 2 cut(s) 690, 723
BanII GRGCYC 2 cut(s) 219, 247
BbsI GAAGAC 2 cut(s) 282, 959
Bbv12I GWGCWC 3 cut(s) 219, 318, 1075
BbvI GCAGC 4 cut(s) 316, 368, 512, 832
BccI CCATC 2 cut(s) 734, 893
BceAI ACGGC 2 cut(s) 44, 369
BcgI CGANNNNNNTGC 2 cut(s) 1043, 1077
BciT130I CCWGG 2 cut(s) 241, 256
BciVI GTATCC 1 cut(s) 691
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1140
BfaI CTAG 2 cut(s) 267, 431
BfmI CTRYAG 2 cut(s) 274, 526
BfuI GTATCC 1 cut(s) 691
BglII AGATCT 1 cut(s) 726
BisI GCNGC 5 cut(s) 305, 382, 526, 717, 846
BlsI GCNGC 5 cut(s) 306, 383, 527, 718, 847
Bme1390I CCNGG 3 cut(s) 241, 256, 1140
Bme18I GGWCC 2 cut(s) 120, 258
BmgT120I GGNCC 2 cut(s) 120, 258
BmiI GGNNCC 2 cut(s) 246, 947
BmrFI CCNGG 3 cut(s) 241, 256, 1140
BmsI GCATC 3 cut(s) 443, 937, 1155
BpiI GAAGAC 2 cut(s) 282, 959
BpmI CTGGAG 2 cut(s) 231, 1066
BpuEI CTTGAG 1 cut(s) 1130
BpuMI CCSGG 1 cut(s) 1140
BsaAI YACGTR 1 cut(s) 327
BsaJI CCNNGG 6 cut(s) 239, 240, 261, 631, 849, 1038
BsaWI WCCGGW 3 cut(s) 211, 948, 1160
Bsc4I CCNNNNNNNGG 4 cut(s) 18, 658, 1138, 1139
Bse1I ACTGG 2 cut(s) 158, 596
Bse3DI GCAATG 2 cut(s) 396, 477
BseAI TCCGGA 2 cut(s) 948, 1160
BseBI CCWGG 2 cut(s) 241, 256
BseDI CCNNGG 6 cut(s) 239, 240, 261, 631, 849, 1038
BseGI GGATG 1 cut(s) 1034
BseLI CCNNNNNNNGG 4 cut(s) 18, 658, 1138, 1139
BseMI GCAATG 2 cut(s) 396, 477
BseMII CTCAG 1 cut(s) 395
BseNI ACTGG 2 cut(s) 158, 596
BseRI GAGGAG 1 cut(s) 1127
BseXI GCAGC 4 cut(s) 316, 368, 512, 832
BseYI CCCAGC 1 cut(s) 719
BshFI GGCC 1 cut(s) 11
BsiHKAI GWGCWC 3 cut(s) 219, 318, 1075
BsiSI CCGG 4 cut(s) 212, 949, 1139, 1161
BslI CCNNNNNNNGG 4 cut(s) 18, 658, 1138, 1139
BsmI GAATGC 1 cut(s) 82
BsnI GGCC 1 cut(s) 11
Bsp1286I GDGCHC 4 cut(s) 219, 247, 318, 1075
Bsp13I TCCGGA 2 cut(s) 948, 1160
Bsp143I GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
BspACI CCGC 1 cut(s) 717
BspANI GGCC 1 cut(s) 11
BspCNI CTCAG 1 cut(s) 396
BspEI TCCGGA 2 cut(s) 948, 1160
BspLI GGNNCC 2 cut(s) 246, 947
BspMAI CTGCAG 1 cut(s) 530
BspPI GGATC 2 cut(s) 119, 1073
BsrDI GCAATG 2 cut(s) 396, 477
BsrI ACTGG 2 cut(s) 158, 596
BssECI CCNNGG 6 cut(s) 239, 240, 261, 631, 849, 1038
BssMI GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
BssT1I CCWWGG 4 cut(s) 261, 631, 849, 1038
Bst2UI CCWGG 2 cut(s) 241, 256
Bst4CI ACNGT 1 cut(s) 1177
BstAPI GCANNNNNTGC 1 cut(s) 313
BstBAI YACGTR 1 cut(s) 327
BstC8I GCNNGC 2 cut(s) 219, 843
BstDEI CTNAG 1 cut(s) 404
BstEII GGTNACC 1 cut(s) 1097
BstF5I GGATG 1 cut(s) 1034
BstKTI GATC 7 cut(s) 6, 106, 127, 355, 729, 960, 1068
BstMBI GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
BstMWI GCNNNNNNNGC 2 cut(s) 313, 838
BstNI CCWGG 2 cut(s) 241, 256
BstNSI RCATGY 1 cut(s) 511
BstPI GGTNACC 1 cut(s) 1097
BstSCI CCNGG 3 cut(s) 239, 254, 1138
BstSFI CTRYAG 2 cut(s) 274, 526
BstV1I GCAGC 4 cut(s) 316, 368, 512, 832
BstV2I GAAGAC 2 cut(s) 282, 959
BstX2I RGATCY 1 cut(s) 726
BstXI CCANNNNNNTGG 1 cut(s) 255
BstYI RGATCY 1 cut(s) 726
BsuI GTATCC 1 cut(s) 691
BsuRI GGCC 1 cut(s) 11
BtsCI GGATG 1 cut(s) 1034
BtsIMutI CAGTG 2 cut(s) 401, 589
Cac8I GCNNGC 2 cut(s) 219, 843
Cfr13I GGNCC 2 cut(s) 120, 258
Csp6I GTAC 2 cut(s) 328, 766
CviAII CATG 5 cut(s) 166, 190, 508, 646, 1055
CviQI GTAC 2 cut(s) 328, 766
DdeI CTNAG 1 cut(s) 404
DpnI GATC 7 cut(s) 5, 105, 126, 354, 728, 959, 1067
DpnII GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
DraIII CACNNNGTG 1 cut(s) 313
Ecl136II GAGCTC 1 cut(s) 217
Eco130I CCWWGG 4 cut(s) 261, 631, 849, 1038
Eco24I GRGCYC 2 cut(s) 219, 247
Eco32I GATATC 2 cut(s) 187, 1017
Eco47I GGWCC 2 cut(s) 120, 258
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 2 cut(s) 248, 822
Eco91I GGTNACC 1 cut(s) 1097
EcoICRI GAGCTC 1 cut(s) 217
EcoO65I GGTNACC 1 cut(s) 1097
EcoRII CCWGG 2 cut(s) 239, 254
EcoRV GATATC 2 cut(s) 187, 1017
EcoT14I CCWWGG 4 cut(s) 261, 631, 849, 1038
EcoT38I GRGCYC 2 cut(s) 219, 247
ErhI CCWWGG 4 cut(s) 261, 631, 849, 1038
FaeI CATG 5 cut(s) 169, 193, 511, 649, 1058
FatI CATG 5 cut(s) 165, 189, 507, 645, 1054
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 305, 382, 526, 717, 846
FokI GGATG 1 cut(s) 1021
FriOI GRGCYC 2 cut(s) 219, 247
Fsp4HI GCNGC 5 cut(s) 305, 382, 526, 717, 846
FspBI CTAG 2 cut(s) 267, 431
GluI GCNGC 5 cut(s) 305, 382, 526, 717, 846
GsaI CCCAGC 1 cut(s) 723
GsuI CTGGAG 2 cut(s) 231, 1066
HaeIII GGCC 1 cut(s) 11
HapII CCGG 4 cut(s) 212, 949, 1139, 1161
Hin1II CATG 5 cut(s) 169, 193, 511, 649, 1058
HincII GTYRAC 1 cut(s) 448
HindII GTYRAC 1 cut(s) 448
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 5 cut(s) 25, 200, 335, 408, 627
HpaI GTTAAC 1 cut(s) 448
HpaII CCGG 4 cut(s) 212, 949, 1139, 1161
HphI GGTGA 3 cut(s) 405, 1054, 1109
Hpy166II GTNNAC 2 cut(s) 330, 448
Hpy188I TCNGA 4 cut(s) 540, 756, 1065, 1070
Hpy188III TCNNGA 6 cut(s) 339, 674, 823, 949, 1083, 1161
Hpy8I GTNNAC 2 cut(s) 330, 448
Hpy99I CGWCG 1 cut(s) 936
HpyAV CCTTC 1 cut(s) 935
HpyCH4III ACNGT 1 cut(s) 1177
HpyCH4IV ACGT 1 cut(s) 326
HpyCH4V TGCA 6 cut(s) 389, 528, 814, 832, 1054, 1146
HpyF10VI GCNNNNNNNGC 2 cut(s) 313, 838
HpyF3I CTNAG 1 cut(s) 404
HpySE526I ACGT 1 cut(s) 326
Hsp92II CATG 5 cut(s) 169, 193, 511, 649, 1058
Kpn2I TCCGGA 2 cut(s) 948, 1160
Ksp22I TGATCA 1 cut(s) 3
KspAI GTTAAC 1 cut(s) 448
Kzo9I GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
LmnI GCTCC 3 cut(s) 214, 250, 1070
Lsp1109I GCAGC 4 cut(s) 316, 368, 512, 832
LweI GCATC 3 cut(s) 443, 937, 1155
MaeI CTAG 2 cut(s) 267, 431
MaeII ACGT 1 cut(s) 326
MaeIII GTNAC 5 cut(s) 201, 269, 530, 982, 1097
MalI GATC 7 cut(s) 5, 105, 126, 354, 728, 959, 1067
MboI GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
MboII GAAGA 7 cut(s) 169, 282, 563, 736, 772, 964, 1057
MfeI CAATTG 1 cut(s) 681
MflI RGATCY 1 cut(s) 726
MhlI GDGCHC 4 cut(s) 219, 247, 318, 1075
MluCI AATT 7 cut(s) 160, 320, 681, 772, 790, 977, 1028
MlyI GAGTC 2 cut(s) 209, 621
MmeI TCCRAC 1 cut(s) 981
MnlI CCTC 8 cut(s) 243, 272, 391, 652, 762, 1088, 1105, 1157
MroI TCCGGA 2 cut(s) 948, 1160
MroXI GAANNNNTTC 1 cut(s) 161
MseI TTAA 6 cut(s) 138, 176, 447, 455, 491, 609
MspA1I CMGCKG 1 cut(s) 719
MspI CCGG 4 cut(s) 212, 949, 1139, 1161
MspR9I CCNGG 3 cut(s) 241, 256, 1140
MunI CAATTG 1 cut(s) 681
Mva1269I GAATGC 1 cut(s) 82
MvaI CCWGG 2 cut(s) 241, 256
MwoI GCNNNNNNNGC 2 cut(s) 313, 838
NciI CCSGG 1 cut(s) 1140
NdeII GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
NlaIII CATG 5 cut(s) 169, 193, 511, 649, 1058
NlaIV GGNNCC 2 cut(s) 246, 947
NmuCI GTSAC 4 cut(s) 201, 530, 982, 1097
NspI RCATGY 1 cut(s) 511
PasI CCCWGGG 1 cut(s) 240
PctI GAATGC 1 cut(s) 82
PdmI GAANNNNTTC 1 cut(s) 161
PfeI GAWTC 3 cut(s) 25, 335, 408
PkrI GCNGC 5 cut(s) 306, 383, 527, 718, 847
PleI GAGTC 2 cut(s) 208, 621
PpsI GAGTC 2 cut(s) 208, 621
Ppu21I YACGTR 1 cut(s) 327
PshBI ATTAAT 1 cut(s) 609
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 2 cut(s) 239, 254
PspEI GGTNACC 1 cut(s) 1097
PspFI CCCAGC 1 cut(s) 719
PspGI CCWGG 2 cut(s) 239, 254
PspN4I GGNNCC 2 cut(s) 246, 947
PspPI GGNCC 2 cut(s) 120, 258
PstI CTGCAG 1 cut(s) 530
PsuI RGATCY 1 cut(s) 726
RsaI GTAC 2 cut(s) 329, 767
RsaNI GTAC 2 cut(s) 328, 766
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 6 cut(s) 138, 176, 447, 455, 491, 609
SatI GCNGC 5 cut(s) 305, 382, 526, 717, 846
Sau3AI GATC 7 cut(s) 3, 103, 124, 352, 726, 957, 1065
Sau96I GGNCC 2 cut(s) 120, 258
SchI GAGTC 2 cut(s) 209, 621
ScrFI CCNGG 3 cut(s) 241, 256, 1140
SduI GDGCHC 4 cut(s) 219, 247, 318, 1075
SfaNI GCATC 3 cut(s) 443, 937, 1155
SfcI CTRYAG 2 cut(s) 274, 526
SinI GGWCC 2 cut(s) 120, 258
SmlI CTYRAG 1 cut(s) 1109
SmoI CTYRAG 1 cut(s) 1109
Sse9I AATT 7 cut(s) 160, 320, 681, 772, 790, 977, 1028
SsiI CCGC 1 cut(s) 717
SspMI CTAG 2 cut(s) 267, 431
SstI GAGCTC 1 cut(s) 219
StyD4I CCNGG 3 cut(s) 239, 254, 1138
StyI CCWWGG 4 cut(s) 261, 631, 849, 1038
TaaI ACNGT 1 cut(s) 1177
TaiI ACGT 1 cut(s) 329
TaqI TCGA 2 cut(s) 423, 931
TaqII GACCGA 1 cut(s) 137
TasI AATT 7 cut(s) 160, 320, 681, 772, 790, 977, 1028
TauI GCSGC 1 cut(s) 719
TfiI GAWTC 3 cut(s) 25, 335, 408
Tru1I TTAA 6 cut(s) 138, 176, 447, 455, 491, 609
Tru9I TTAA 6 cut(s) 138, 176, 447, 455, 491, 609
TscAI CASTG 2 cut(s) 408, 596
TseFI GTSAC 4 cut(s) 201, 530, 982, 1097
TseI GCWGC 4 cut(s) 304, 381, 525, 845
Tsp45I GTSAC 4 cut(s) 201, 530, 982, 1097
TspDTI ATGAA 7 cut(s) 47, 89, 154, 354, 513, 874, 1071
TspGWI ACGGA 1 cut(s) 1023
TspRI CASTG 2 cut(s) 408, 596
VpaK11BI GGWCC 2 cut(s) 120, 258
VspI ATTAAT 1 cut(s) 609
XapI RAATTY 4 cut(s) 160, 320, 790, 1028
XceI RCATGY 1 cut(s) 511
XmnI GAANNNNTTC 1 cut(s) 161
XspI CTAG 2 cut(s) 267, 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.