Rh2CG045400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000089
Physical Location & Seq
Forward (+)
3581435 .. 3585037
3603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG045400.1

Sequence Viewer

Length: 1488 bp
ATGAGAAATTCTGAAGCAAATTTGAGTTCTCTGTCTCATTTGCCAGCTGATGCAGAACCTATTTCAGCTGAAGGTGAAGCTATAGAAAAGCCAAAAATACCACCTAGAGGTAAAGCAAAATTGTTGGACATTAGCAAGAAAAAGAGAAAACGTCCTATCCTGGTTGAATTCAATGAAAGAGGCCAGCCAATTGGGAAAACTGCAGCTCTATTCTCCTCATTTATTGGATGCACAGCAAGAGAGCTAATACCAATGACTGCACCGACCTGGAAAAATCTTTCAGATTTGTTCAAAACTCAGATTTGGGAACACATAACAACAAGTTTCATTGTTGACGAATGCCATAAGAAACAAGTTATTCGAAGGATGATCAAGCTTTGGCGAGATAATAGATCCAATGTGATGAAAGAAGTGGAGAAGCAAGCCGAACTTGTAGGCCTACAACGTGCTGCTACCCTTCTCAAACCTGATAATGTAGAATCTATGAATCAGTGGCTAGATTTTGTCAAAAACAGAACTAGTCCATCATTTAAGGAAATGTCTAAAAAATTCAAAGCAATGCGCGCAGAAAGAACCTTACTCCACAGAACTAGTAGAAAAAGCTTTGCTCGTGTTGAAGAAGAATTAAGGGAACAAAGTGAAATCCCAGATGCAATAACAAGGTCTGATGTTTGGATTCATGCTTACGAAGCAAAGAAGAAGAAGGATTCAGATGTAGTGGAGGATCCAGAAATAGTGAAACAAGTGAAAATGTACAGAGCTGAGCAAGAACCTTCAGAGAAATGTTCTTTGAAAGATGATGTTGTTGCAAAAGTACTCGGTCCTGATCCACGAGGACGAGTAAGAGGTTTGGGATTTGGAGTAGTCCCTTCAAAGGCAGATTATCAAACCAGTGTTGGAAACAAAGTTGCTAAGTTAGAGAATGCTTTATTTGCTCAATCACAAGATATGCTTGCTCAATCACAAGAGATCGAACGATTGAAAGAGGTGGTTGGAACTATTTTGGCATGGACAGAGAAAGAGGGGAATAACCATGGAAGTACTAGTGGTCAGCATTCTGGTAATGCGCTTTCACAACAAAAAGATAAGGAAAATACAAGTGTGAGTGTGCAGAATTCTAAAACTGGGAGAGGAAAAATCAAGCTCAATAAACAGAACTTAAGTGTTCAACATTCTGTTGATGAGGGGTTGCAGACCAAAGAAAAGGAAGGTGCAAGGACCAAGGGCATTAAGAATGATCATAGTAGAGTTGAGTTATTAAATTGGTTTCAAATGGGAGAAGAGGTTGTTGCAAGTGCAAAACTTGAGTCAAAGGATCCGACTGCAATGGTCCATCACGTGCCTCTTGGCCAAGAATGTTGGAAAGTTTGGGTTCTTGATGTTTTGGAGGATATAGCTTTGTATCGACCAACGAGAGAGTTTGGAATGCTAAGTATGGCTCAAGGAAGTACAATTGCATGGCCTATCAAGTACATCAAGCTGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

495

Amino Acids

55.96

Weight (kDa)

9.34

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 163 - 288 5.5e-18 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 426 - 494 1.5e-06 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 564
AclWI GGATC 6 cut(s) 387, 719, 732, 821, 1310, 1323
AcoI YGGCCR 1 cut(s) 1348
AcsI RAATTY 5 cut(s) 7, 19, 167, 548, 1114
AcuI CTGAAG 3 cut(s) 33, 90, 759
AcvI CACGTG 1 cut(s) 1339
AfaI GTAC 5 cut(s) 755, 816, 1042, 1450, 1472
AfiI CCNNNNNNNGG 2 cut(s) 107, 874
AflII CTTAAG 1 cut(s) 1159
AhlI ACTAGT 3 cut(s) 518, 590, 1043
AjnI CCWGG 2 cut(s) 159, 266
Alw26I GTCTC 1 cut(s) 39
AlwI GGATC 6 cut(s) 387, 719, 732, 821, 1310, 1323
AoxI GGCC 4 cut(s) 181, 436, 1348, 1460
ApeKI GCWGC 2 cut(s) 203, 449
ApoI RAATTY 5 cut(s) 7, 19, 167, 548, 1114
ArsI GACNNNNNNTTYG 2 cut(s) 1292, 1324
AspLEI GCGC 3 cut(s) 564, 566, 1069
AspS9I GGNCC 3 cut(s) 821, 1218, 1330
AsuHPI GGTGA 1 cut(s) 86
AsuII TTCGAA 1 cut(s) 361
AvaII GGWCC 3 cut(s) 821, 1218, 1330
BalI TGGCCA 1 cut(s) 1350
BamHI GGATCC 2 cut(s) 724, 1315
BauI CACGAG 2 cut(s) 609, 831
BbrPI CACGTG 1 cut(s) 1339
BbvI GCAGC 2 cut(s) 215, 436
BccI CCATC 2 cut(s) 532, 1341
BciT130I CCWGG 2 cut(s) 161, 268
BclI TGATCA 2 cut(s) 369, 1237
BcoDI GTCTC 1 cut(s) 39
BcuI ACTAGT 3 cut(s) 518, 590, 1043
BfaI CTAG 5 cut(s) 105, 497, 519, 591, 1044
BfmI CTRYAG 2 cut(s) 81, 201
BfrI CTTAAG 1 cut(s) 1159
BisI GCNGC 2 cut(s) 204, 450
BlpI GCTNAGC 1 cut(s) 762
BlsI GCNGC 2 cut(s) 205, 451
BmcAI AGTACT 2 cut(s) 816, 1042
Bme1390I CCNGG 2 cut(s) 161, 268
Bme18I GGWCC 3 cut(s) 821, 1218, 1330
BmgT120I GGNCC 3 cut(s) 821, 1218, 1330
BmiI GGNNCC 2 cut(s) 726, 1317
BmrFI CCNGG 2 cut(s) 161, 268
BmrI ACTGGG 1 cut(s) 1134
BmsI GCATC 3 cut(s) 40, 218, 640
BmuI ACTGGG 1 cut(s) 1134
Bpu1102I GCTNAGC 1 cut(s) 762
Bpu14I TTCGAA 1 cut(s) 361
BpuEI CTTGAG 2 cut(s) 1325, 1425
BsaAI YACGTR 1 cut(s) 1339
BsaJI CCNNGG 2 cut(s) 1033, 1221
BsaXI ACNNNNNCTCC 2 cut(s) 1269, 1299
Bsc4I CCNNNNNNNGG 2 cut(s) 107, 874
Bse1I ACTGG 2 cut(s) 891, 1129
Bse3DI GCAATG 2 cut(s) 564, 1332
BseBI CCWGG 2 cut(s) 161, 268
BseDI CCNNGG 2 cut(s) 1033, 1221
BseGI GGATG 2 cut(s) 233, 372
BseLI CCNNNNNNNGG 2 cut(s) 107, 874
BseMI GCAATG 2 cut(s) 564, 1332
BseMII CTCAG 2 cut(s) 311, 753
BseNI ACTGG 2 cut(s) 891, 1129
BsePI GCGCGC 1 cut(s) 562
BseRI GAGGAG 1 cut(s) 205
BseXI GCAGC 2 cut(s) 215, 436
BsgI GTGCAG 2 cut(s) 243, 1130
Bsh1236I CGCG 1 cut(s) 564
BshFI GGCC 4 cut(s) 183, 438, 1350, 1462
BslFI GGGAC 1 cut(s) 851
BslI CCNNNNNNNGG 2 cut(s) 107, 874
BsmAI GTCTC 1 cut(s) 39
BsmFI GGGAC 1 cut(s) 851
BsmI GAATGC 4 cut(s) 344, 928, 1054, 1431
BsnI GGCC 4 cut(s) 183, 438, 1350, 1462
Bsp119I TTCGAA 1 cut(s) 361
Bsp1407I TGTACA 1 cut(s) 753
Bsp143I GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
Bsp1720I GCTNAGC 1 cut(s) 762
Bsp19I CCATGG 1 cut(s) 1033
BspANI GGCC 4 cut(s) 183, 438, 1350, 1462
BspCNI CTCAG 2 cut(s) 310, 754
BspFNI CGCG 1 cut(s) 564
BspLI GGNNCC 2 cut(s) 726, 1317
BspMAI CTGCAG 1 cut(s) 205
BspPI GGATC 6 cut(s) 387, 719, 732, 821, 1310, 1323
BspT104I TTCGAA 1 cut(s) 361
BspTI CTTAAG 1 cut(s) 1159
BsrDI GCAATG 2 cut(s) 564, 1332
BsrGI TGTACA 1 cut(s) 753
BsrI ACTGG 2 cut(s) 891, 1129
BssECI CCNNGG 2 cut(s) 1033, 1221
BssHII GCGCGC 1 cut(s) 562
BssMI GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
BssSI CACGAG 2 cut(s) 609, 831
BssT1I CCWWGG 2 cut(s) 1033, 1221
Bst2BI CACGAG 2 cut(s) 609, 831
Bst2UI CCWGG 2 cut(s) 161, 268
Bst6I CTCTTC 1 cut(s) 1275
BstAFI CTTAAG 1 cut(s) 1159
BstAUI TGTACA 1 cut(s) 753
BstBAI YACGTR 1 cut(s) 1339
BstBI TTCGAA 1 cut(s) 361
BstC8I GCNNGC 5 cut(s) 45, 185, 423, 564, 954
BstDEI CTNAG 4 cut(s) 297, 762, 912, 1430
BstDSI CCRYGG 1 cut(s) 1033
BstF5I GGATG 2 cut(s) 233, 372
BstFNI CGCG 1 cut(s) 564
BstHHI GCGC 3 cut(s) 564, 566, 1069
BstKTI GATC 7 cut(s) 372, 395, 727, 829, 972, 1240, 1318
BstMAI GTCTC 1 cut(s) 39
BstMBI GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
BstMWI GCNNNNNNNGC 3 cut(s) 563, 689, 932
BstNI CCWGG 2 cut(s) 161, 268
BstSCI CCNGG 2 cut(s) 159, 266
BstSFI CTRYAG 2 cut(s) 81, 201
BstUI CGCG 1 cut(s) 564
BstV1I GCAGC 2 cut(s) 215, 436
BstX2I RGATCY 3 cut(s) 392, 724, 1315
BstXI CCANNNNNNTGG 1 cut(s) 191
BstYI RGATCY 3 cut(s) 392, 724, 1315
BsuRI GGCC 4 cut(s) 183, 438, 1350, 1462
BtgI CCRYGG 1 cut(s) 1033
BtsCI GGATG 2 cut(s) 233, 372
BtsIMutI CAGTG 2 cut(s) 497, 898
Cac8I GCNNGC 5 cut(s) 45, 185, 423, 564, 954
CfoI GCGC 3 cut(s) 564, 566, 1069
Cfr13I GGNCC 3 cut(s) 821, 1218, 1330
Csp6I GTAC 5 cut(s) 754, 815, 1041, 1449, 1471
CviAII CATG 4 cut(s) 680, 1008, 1034, 1458
CviQI GTAC 5 cut(s) 754, 815, 1041, 1449, 1471
DdeI CTNAG 4 cut(s) 297, 762, 912, 1430
DpnI GATC 7 cut(s) 371, 394, 726, 828, 971, 1239, 1317
DpnII GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
EaeI YGGCCR 1 cut(s) 1348
Eam1104I CTCTTC 1 cut(s) 1275
EarI CTCTTC 1 cut(s) 1275
Eco130I CCWWGG 2 cut(s) 1033, 1221
Eco147I AGGCCT 1 cut(s) 438
Eco47I GGWCC 3 cut(s) 821, 1218, 1330
Eco57I CTGAAG 3 cut(s) 33, 90, 759
Eco72I CACGTG 1 cut(s) 1339
EcoRI GAATTC 2 cut(s) 167, 1114
EcoRII CCWGG 2 cut(s) 159, 266
EcoT14I CCWWGG 2 cut(s) 1033, 1221
ErhI CCWWGG 2 cut(s) 1033, 1221
FaeI CATG 4 cut(s) 683, 1011, 1037, 1461
FalI AAGNNNNNCTT 4 cut(s) 414, 446, 936, 968
FaqI GGGAC 1 cut(s) 851
FatI CATG 4 cut(s) 679, 1007, 1033, 1457
FbaI TGATCA 2 cut(s) 369, 1237
Fnu4HI GCNGC 2 cut(s) 204, 450
FokI GGATG 2 cut(s) 240, 379
Fsp4HI GCNGC 2 cut(s) 204, 450
FspBI CTAG 5 cut(s) 105, 497, 519, 591, 1044
GlaI GCGC 3 cut(s) 563, 565, 1068
GluI GCNGC 2 cut(s) 204, 450
HaeIII GGCC 4 cut(s) 183, 438, 1350, 1462
HhaI GCGC 3 cut(s) 564, 566, 1069
Hin1II CATG 4 cut(s) 683, 1011, 1037, 1461
Hin6I GCGC 3 cut(s) 562, 564, 1067
HinP1I GCGC 3 cut(s) 562, 564, 1067
HincII GTYRAC 1 cut(s) 334
HindII GTYRAC 1 cut(s) 334
HindIII AAGCTT 2 cut(s) 374, 601
HinfI GANTC 5 cut(s) 479, 487, 676, 707, 1307
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 1 cut(s) 334
Hpy188I TCNGA 7 cut(s) 13, 283, 300, 667, 712, 778, 1320
Hpy188III TCNNGA 3 cut(s) 728, 824, 1376
Hpy8I GTNNAC 1 cut(s) 334
HpyAV CCTTC 7 cut(s) 65, 357, 467, 697, 783, 879, 1202
HpyCH4IV ACGT 3 cut(s) 151, 445, 1338
HpyF10VI GCNNNNNNNGC 3 cut(s) 563, 689, 932
HpyF3I CTNAG 4 cut(s) 297, 762, 912, 1430
HpySE526I ACGT 3 cut(s) 151, 445, 1338
Hsp92II CATG 4 cut(s) 683, 1011, 1037, 1461
HspAI GCGC 3 cut(s) 562, 564, 1067
Ksp22I TGATCA 2 cut(s) 369, 1237
Kzo9I GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
Lsp1109I GCAGC 2 cut(s) 215, 436
LweI GCATC 3 cut(s) 40, 218, 640
MaeI CTAG 5 cut(s) 105, 497, 519, 591, 1044
MaeII ACGT 3 cut(s) 151, 445, 1338
MalI GATC 7 cut(s) 371, 394, 726, 828, 971, 1239, 1317
MboI GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
MboII GAAGA 5 cut(s) 629, 632, 709, 712, 1292
MfeI CAATTG 2 cut(s) 189, 1452
MflI RGATCY 3 cut(s) 392, 724, 1315
MlsI TGGCCA 1 cut(s) 1350
MluNI TGGCCA 1 cut(s) 1350
MlyI GAGTC 1 cut(s) 1316
MmeI TCCRAC 5 cut(s) 105, 877, 973, 1340, 1343
Mox20I TGGCCA 1 cut(s) 1350
MscI TGGCCA 1 cut(s) 1350
MseI TTAA 5 cut(s) 531, 626, 1160, 1230, 1259
Msp20I TGGCCA 1 cut(s) 1350
MspA1I CMGCKG 2 cut(s) 47, 68
MspCI CTTAAG 1 cut(s) 1159
MspR9I CCNGG 2 cut(s) 161, 268
MunI CAATTG 2 cut(s) 189, 1452
Mva1269I GAATGC 4 cut(s) 344, 928, 1054, 1431
MvaI CCWGG 2 cut(s) 161, 268
MvnI CGCG 1 cut(s) 564
MwoI GCNNNNNNNGC 3 cut(s) 563, 689, 932
NcoI CCATGG 1 cut(s) 1033
NdeII GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
NlaIII CATG 4 cut(s) 683, 1011, 1037, 1461
NlaIV GGNNCC 2 cut(s) 726, 1317
NspV TTCGAA 1 cut(s) 361
PauI GCGCGC 1 cut(s) 562
PceI AGGCCT 1 cut(s) 438
PctI GAATGC 4 cut(s) 344, 928, 1054, 1431
PfeI GAWTC 4 cut(s) 479, 487, 676, 707
PkrI GCNGC 2 cut(s) 205, 451
PleI GAGTC 1 cut(s) 1315
PmaCI CACGTG 1 cut(s) 1339
PmlI CACGTG 1 cut(s) 1339
PpsI GAGTC 1 cut(s) 1315
Ppu21I YACGTR 1 cut(s) 1339
Psp6I CCWGG 2 cut(s) 159, 266
PspCI CACGTG 1 cut(s) 1339
PspGI CCWGG 2 cut(s) 159, 266
PspN4I GGNNCC 2 cut(s) 726, 1317
PspPI GGNCC 3 cut(s) 821, 1218, 1330
PstI CTGCAG 1 cut(s) 205
PsuI RGATCY 3 cut(s) 392, 724, 1315
PteI GCGCGC 1 cut(s) 562
PvuII CAGCTG 2 cut(s) 47, 68
RsaI GTAC 5 cut(s) 755, 816, 1042, 1450, 1472
RsaNI GTAC 5 cut(s) 754, 815, 1041, 1449, 1471
SaqAI TTAA 5 cut(s) 531, 626, 1160, 1230, 1259
SatI GCNGC 2 cut(s) 204, 450
Sau3AI GATC 7 cut(s) 369, 392, 724, 826, 969, 1237, 1315
Sau96I GGNCC 3 cut(s) 821, 1218, 1330
ScaI AGTACT 2 cut(s) 816, 1042
SchI GAGTC 1 cut(s) 1316
ScrFI CCNGG 2 cut(s) 161, 268
SfaNI GCATC 3 cut(s) 40, 218, 640
SfcI CTRYAG 2 cut(s) 81, 201
SfuI TTCGAA 1 cut(s) 361
SinI GGWCC 3 cut(s) 821, 1218, 1330
SmlI CTYRAG 3 cut(s) 1159, 1304, 1440
SmoI CTYRAG 3 cut(s) 1159, 1304, 1440
SpeI ACTAGT 3 cut(s) 518, 590, 1043
SseBI AGGCCT 1 cut(s) 438
SspMI CTAG 5 cut(s) 105, 497, 519, 591, 1044
StuI AGGCCT 1 cut(s) 438
StyD4I CCNGG 2 cut(s) 159, 266
StyI CCWWGG 2 cut(s) 1033, 1221
TaiI ACGT 3 cut(s) 154, 448, 1341
TaqI TCGA 3 cut(s) 361, 972, 1405
TaqII GACCGA 1 cut(s) 809
TatI WGTACW 5 cut(s) 753, 814, 1040, 1448, 1470
TfiI GAWTC 4 cut(s) 479, 487, 676, 707
Tru1I TTAA 5 cut(s) 531, 626, 1160, 1230, 1259
Tru9I TTAA 5 cut(s) 531, 626, 1160, 1230, 1259
TscAI CASTG 2 cut(s) 497, 898
TseI GCWGC 2 cut(s) 203, 449
TspDTI ATGAA 5 cut(s) 189, 316, 419, 500, 668
TspRI CASTG 2 cut(s) 497, 898
Vha464I CTTAAG 1 cut(s) 1159
VpaK11BI GGWCC 3 cut(s) 821, 1218, 1330
XapI RAATTY 5 cut(s) 7, 19, 167, 548, 1114
XspI CTAG 5 cut(s) 105, 497, 519, 591, 1044
ZrmI AGTACT 2 cut(s) 816, 1042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.