isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 115 - 237 | 1.6e-22 | Plant transposase (Ptta/En/Spm family) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 533 |
| AfaI | GTAC | 6 cut(s) | 99, 111, 159, 404, 429, 553 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 247 |
| AgsI | TTSAA | 3 cut(s) | 38, 44, 605 |
| AjnI | CCWGG | 1 cut(s) | 679 |
| AluBI | AGCT | 4 cut(s) | 54, 72, 470, 763 |
| AluI | AGCT | 4 cut(s) | 54, 72, 470, 763 |
| Alw21I | GWGCWC | 1 cut(s) | 759 |
| AlwI | GGATC | 1 cut(s) | 533 |
| AoxI | GGCC | 2 cut(s) | 88, 249 |
| ApaI | GGGCCC | 1 cut(s) | 92 |
| ApeKI | GCWGC | 2 cut(s) | 284, 467 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 174, 306 |
| AspS9I | GGNCC | 4 cut(s) | 19, 88, 89, 249 |
| AsuHPI | GGTGA | 5 cut(s) | 71, 155, 209, 587, 606 |
| AvaII | GGWCC | 1 cut(s) | 19 |
| BaeGI | GKGCMC | 1 cut(s) | 92 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 543, 576 |
| BanII | GRGCYC | 1 cut(s) | 92 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 694, 726 |
| Bbv12I | GWGCWC | 1 cut(s) | 759 |
| BbvI | GCAGC | 2 cut(s) | 296, 479 |
| BccI | CCATC | 3 cut(s) | 226, 505, 542 |
| BciT130I | CCWGG | 1 cut(s) | 681 |
| BfaI | CTAG | 3 cut(s) | 261, 741, 764 |
| BisI | GCNGC | 2 cut(s) | 285, 468 |
| BlsI | GCNGC | 2 cut(s) | 286, 469 |
| Bme1390I | CCNGG | 1 cut(s) | 681 |
| Bme18I | GGWCC | 1 cut(s) | 19 |
| BmgT120I | GGNCC | 4 cut(s) | 19, 88, 89, 249 |
| BmiI | GGNNCC | 3 cut(s) | 21, 90, 137 |
| BmrFI | CCNGG | 1 cut(s) | 681 |
| BmsI | GCATC | 2 cut(s) | 227, 637 |
| BpmI | CTGGAG | 1 cut(s) | 743 |
| BpuEI | CTTGAG | 1 cut(s) | 642 |
| BsaJI | CCNNGG | 1 cut(s) | 139 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 247 |
| Bse1I | ACTGG | 1 cut(s) | 65 |
| BseBI | CCWGG | 1 cut(s) | 681 |
| BseDI | CCNNGG | 1 cut(s) | 139 |
| BseGI | GGATG | 2 cut(s) | 242, 620 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 247 |
| BseMII | CTCAG | 1 cut(s) | 15 |
| BseNI | ACTGG | 1 cut(s) | 65 |
| BseSI | GKGCMC | 1 cut(s) | 92 |
| BseXI | GCAGC | 2 cut(s) | 296, 479 |
| BshFI | GGCC | 2 cut(s) | 90, 251 |
| BsiHKAI | GWGCWC | 1 cut(s) | 759 |
| BslFI | GGGAC | 1 cut(s) | 758 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 247 |
| BsmFI | GGGAC | 1 cut(s) | 758 |
| BsnI | GGCC | 2 cut(s) | 90, 251 |
| Bsp120I | GGGCCC | 1 cut(s) | 88 |
| Bsp1286I | GDGCHC | 2 cut(s) | 92, 759 |
| Bsp143I | GATC | 1 cut(s) | 525 |
| BspANI | GGCC | 2 cut(s) | 90, 251 |
| BspCNI | CTCAG | 1 cut(s) | 16 |
| BspLI | GGNNCC | 3 cut(s) | 21, 90, 137 |
| BspPI | GGATC | 1 cut(s) | 533 |
| BspQI | GCTCTTC | 1 cut(s) | 762 |
| BsrI | ACTGG | 1 cut(s) | 65 |
| BssECI | CCNNGG | 1 cut(s) | 139 |
| BssMI | GATC | 1 cut(s) | 525 |
| BssT1I | CCWWGG | 1 cut(s) | 139 |
| Bst2UI | CCWGG | 1 cut(s) | 681 |
| Bst4CI | ACNGT | 1 cut(s) | 738 |
| Bst6I | CTCTTC | 2 cut(s) | 697, 762 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstF5I | GGATG | 2 cut(s) | 242, 620 |
| BstKTI | GATC | 1 cut(s) | 528 |
| BstMBI | GATC | 1 cut(s) | 525 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 769 |
| BstNI | CCWGG | 1 cut(s) | 681 |
| BstNSI | RCATGY | 3 cut(s) | 110, 441, 755 |
| BstSCI | CCNGG | 1 cut(s) | 679 |
| BstSLI | GKGCMC | 1 cut(s) | 92 |
| BstV1I | GCAGC | 2 cut(s) | 296, 479 |
| BsuRI | GGCC | 2 cut(s) | 90, 251 |
| BtsCI | GGATG | 2 cut(s) | 242, 620 |
| BtsIMutI | CAGTG | 1 cut(s) | 777 |
| Cfr13I | GGNCC | 4 cut(s) | 19, 88, 89, 249 |
| Csp6I | GTAC | 6 cut(s) | 98, 110, 158, 403, 428, 552 |
| CviAII | CATG | 4 cut(s) | 107, 179, 438, 752 |
| CviJI | RGCY | 9 cut(s) | 54, 72, 90, 251, 313, 389, 470, 728, 763 |
| CviKI_1 | RGCY | 9 cut(s) | 54, 72, 90, 251, 313, 389, 470, 728, 763 |
| CviQI | GTAC | 6 cut(s) | 98, 110, 158, 403, 428, 552 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| DpnI | GATC | 1 cut(s) | 527 |
| DpnII | GATC | 1 cut(s) | 525 |
| Eam1104I | CTCTTC | 2 cut(s) | 697, 762 |
| EarI | CTCTTC | 2 cut(s) | 697, 762 |
| Eco130I | CCWWGG | 1 cut(s) | 139 |
| Eco24I | GRGCYC | 1 cut(s) | 92 |
| Eco47I | GGWCC | 1 cut(s) | 19 |
| EcoO109I | RGGNCCY | 2 cut(s) | 89, 249 |
| EcoRII | CCWGG | 1 cut(s) | 679 |
| EcoT14I | CCWWGG | 1 cut(s) | 139 |
| EcoT38I | GRGCYC | 1 cut(s) | 92 |
| ErhI | CCWWGG | 1 cut(s) | 139 |
| FaeI | CATG | 4 cut(s) | 110, 182, 441, 755 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 291, 323, 636, 668 |
| FaqI | GGGAC | 1 cut(s) | 758 |
| FatI | CATG | 4 cut(s) | 106, 178, 437, 751 |
| Fnu4HI | GCNGC | 2 cut(s) | 285, 468 |
| FokI | GGATG | 2 cut(s) | 249, 607 |
| FriOI | GRGCYC | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 2 cut(s) | 285, 468 |
| FspBI | CTAG | 3 cut(s) | 261, 741, 764 |
| GluI | GCNGC | 2 cut(s) | 285, 468 |
| GsuI | CTGGAG | 1 cut(s) | 743 |
| HaeIII | GGCC | 2 cut(s) | 90, 251 |
| Hin1II | CATG | 4 cut(s) | 110, 182, 441, 755 |
| HincII | GTYRAC | 1 cut(s) | 493 |
| HindII | GTYRAC | 1 cut(s) | 493 |
| HindIII | AAGCTT | 1 cut(s) | 70 |
| HinfI | GANTC | 3 cut(s) | 28, 34, 611 |
| HphI | GGTGA | 5 cut(s) | 71, 155, 209, 587, 606 |
| Hpy166II | GTNNAC | 4 cut(s) | 62, 422, 493, 554 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 2 cut(s) | 261, 361 |
| Hpy8I | GTNNAC | 4 cut(s) | 62, 422, 493, 554 |
| HpyAV | CCTTC | 1 cut(s) | 739 |
| HpyCH4III | ACNGT | 1 cut(s) | 738 |
| HpyCH4V | TGCA | 2 cut(s) | 182, 441 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 769 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| Hsp92II | CATG | 4 cut(s) | 110, 182, 441, 755 |
| Kzo9I | GATC | 1 cut(s) | 525 |
| LguI | GCTCTTC | 1 cut(s) | 762 |
| LmnI | GCTCC | 1 cut(s) | 762 |
| LpnPI | CCDG | 8 cut(s) | 36, 78, 126, 333, 570, 666, 693, 773 |
| Lsp1109I | GCAGC | 2 cut(s) | 296, 479 |
| LweI | GCATC | 2 cut(s) | 227, 637 |
| MaeI | CTAG | 3 cut(s) | 261, 741, 764 |
| MaeIII | GTNAC | 3 cut(s) | 115, 395, 709 |
| MalI | GATC | 1 cut(s) | 527 |
| MboI | GATC | 1 cut(s) | 525 |
| MboII | GAAGA | 8 cut(s) | 16, 182, 212, 361, 492, 656, 714, 779 |
| MfeI | CAATTG | 1 cut(s) | 570 |
| MhlI | GDGCHC | 2 cut(s) | 92, 759 |
| MluCI | AATT | 4 cut(s) | 44, 342, 570, 722 |
| MlyI | GAGTC | 1 cut(s) | 37 |
| MmeI | TCCRAC | 2 cut(s) | 11, 401 |
| MnlI | CCTC | 8 cut(s) | 102, 126, 240, 262, 408, 628, 634, 686 |
| MroXI | GAANNNNTTC | 2 cut(s) | 174, 306 |
| MseI | TTAA | 7 cut(s) | 48, 153, 225, 384, 516, 593, 689 |
| MslI | CAYNNNNRTG | 2 cut(s) | 436, 782 |
| MspA1I | CMGCKG | 1 cut(s) | 470 |
| MspR9I | CCNGG | 1 cut(s) | 681 |
| MunI | CAATTG | 1 cut(s) | 570 |
| MvaI | CCWGG | 1 cut(s) | 681 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 769 |
| NdeII | GATC | 1 cut(s) | 525 |
| NlaIII | CATG | 4 cut(s) | 110, 182, 441, 755 |
| NlaIV | GGNNCC | 3 cut(s) | 21, 90, 137 |
| NmuCI | GTSAC | 1 cut(s) | 395 |
| NspI | RCATGY | 3 cut(s) | 110, 441, 755 |
| PciSI | GCTCTTC | 1 cut(s) | 762 |
| PdmI | GAANNNNTTC | 2 cut(s) | 174, 306 |
| PfeI | GAWTC | 2 cut(s) | 34, 611 |
| PkrI | GCNGC | 2 cut(s) | 286, 469 |
| PleI | GAGTC | 1 cut(s) | 36 |
| PpsI | GAGTC | 1 cut(s) | 36 |
| Psp6I | CCWGG | 1 cut(s) | 679 |
| PspGI | CCWGG | 1 cut(s) | 679 |
| PspN4I | GGNNCC | 3 cut(s) | 21, 90, 137 |
| PspOMI | GGGCCC | 1 cut(s) | 88 |
| PspPI | GGNCC | 4 cut(s) | 19, 88, 89, 249 |
| PvuII | CAGCTG | 1 cut(s) | 470 |
| RsaI | GTAC | 6 cut(s) | 99, 111, 159, 404, 429, 553 |
| RsaNI | GTAC | 6 cut(s) | 98, 110, 158, 403, 428, 552 |
| RseI | CAYNNNNRTG | 2 cut(s) | 436, 782 |
| SapI | GCTCTTC | 1 cut(s) | 762 |
| SaqAI | TTAA | 7 cut(s) | 48, 153, 225, 384, 516, 593, 689 |
| SatI | GCNGC | 2 cut(s) | 285, 468 |
| Sau3AI | GATC | 1 cut(s) | 525 |
| Sau96I | GGNCC | 4 cut(s) | 19, 88, 89, 249 |
| SchI | GAGTC | 1 cut(s) | 37 |
| ScrFI | CCNGG | 1 cut(s) | 681 |
| SduI | GDGCHC | 2 cut(s) | 92, 759 |
| SetI | ASST | 9 cut(s) | 56, 74, 115, 141, 153, 472, 559, 682, 765 |
| SfaNI | GCATC | 2 cut(s) | 227, 637 |
| SinI | GGWCC | 1 cut(s) | 19 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 436, 782 |
| SmlI | CTYRAG | 1 cut(s) | 657 |
| SmoI | CTYRAG | 1 cut(s) | 657 |
| Sse9I | AATT | 4 cut(s) | 44, 342, 570, 722 |
| SspMI | CTAG | 3 cut(s) | 261, 741, 764 |
| StyD4I | CCNGG | 1 cut(s) | 679 |
| StyI | CCWWGG | 1 cut(s) | 139 |
| TaaI | ACNGT | 1 cut(s) | 738 |
| TaqI | TCGA | 2 cut(s) | 230, 460 |
| TasI | AATT | 4 cut(s) | 44, 342, 570, 722 |
| TatI | WGTACW | 1 cut(s) | 402 |
| TfiI | GAWTC | 2 cut(s) | 34, 611 |
| Tru1I | TTAA | 7 cut(s) | 48, 153, 225, 384, 516, 593, 689 |
| Tru9I | TTAA | 7 cut(s) | 48, 153, 225, 384, 516, 593, 689 |
| TscAI | CASTG | 1 cut(s) | 784 |
| TseFI | GTSAC | 1 cut(s) | 395 |
| TseI | GCWGC | 2 cut(s) | 284, 467 |
| Tsp45I | GTSAC | 1 cut(s) | 395 |
| TspDTI | ATGAA | 4 cut(s) | 17, 167, 260, 491 |
| TspRI | CASTG | 1 cut(s) | 784 |
| VpaK11BI | GGWCC | 1 cut(s) | 19 |
| XbaI | TCTAGA | 1 cut(s) | 260 |
| XceI | RCATGY | 3 cut(s) | 110, 441, 755 |
| XmnI | GAANNNNTTC | 2 cut(s) | 174, 306 |
| XspI | CTAG | 3 cut(s) | 261, 741, 764 |