Rh6BG053200

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000089
Physical Location & Seq
Forward (+)
8708848 .. 8711222
2375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG053200.1

Sequence Viewer

Length: 1362 bp
ATGGCTGGTGATGCAAAGATGAGAAGTTCTCACAAGAGGAAACATGCTCGGGAAGCCACACAAGCATCAAAGGTTTCTCATGTAGGGGATAAGAATATACAAGTTAGTCCAGAACTATGTCAAGATACATTAAAACCACGTGATGAGAGTCCAGAACCTAACATCCAACACCACTCACCTTCCACAAAAGAAGTGGTACAAGAAGATGCACCACCGTCACAAGAATCAGCTGTAGACCCGAGAGGACTAAAGAAAACGAGGGGTCCAACGAAAATGAAAGATATTGCTGTGGAGCCTGGAAGTCGAATTCATGCTGAATTTACTGATAAAGGTGAACCATGTGGTGAGGGCTCAGTTAGTTTGTCTTCTTATTTAGGCCCACTTGTACGAGAACACGTACCTGTAACACTCCACGATTGGAGGAAGCTTGGTGATGACATAAAAGTAGTTTTGTGGAAATCAATTCAGGCAAGATTTGACTTGGAGGAGGAATGCCAAGTCAAATGGCATAAGGCTGTCGTATTTAAATCGATGGGATGTATATGGAGGGCCTCAAAGTCAAGGTTAGTGAGCCAAATACAGGAGGCCAAAAACAAAGGAGAAAGACTTCGACTCCAACCTAAGAATGTTCAAAGTAGAGTAGAGTGGAAAAGGTTCATCCGTACAAAAACTAGTCCAGCATTTAAGGAGAGGGTGAATGTAGTTGAAAGTGATTTGCCATCATCTTCAACAACTAATGTGAGAGAAGATGATCTGTCTAAAGTCTTAGGACACGATAAACCTGGACGACTAAGAGGAATGGGAAGAGGAATGACCATCAGCAAATTGGCATTCTTTCAGACTAAGGACAAGCATGTGGCTAAGATGCAAGAGCAACAAATTAACATGCAAGACAGAATAAATCATTTGGAGAACTTGGTCAATAAATTAGTGAAAAATAAGATTCAACAAAGTGAGGAAGAGGAGAAAACATCTCCAATGAGCGTCAACACCAACTCATTGAATAAGTGCAAGCTACTAGATTGGAGTGGAACAGAGGACATTGTTGCTGAAGGTCGTTGGGTTTCAAGTGATCCAGAAGAGTCTGTCAATGAAATTCCCTTGGGACCTAATGCAATGAAAGTCATGGTTGATATCTCAAATAAACCAAATGCTTTTCTTTGGAGGCCTACATCTAATATGTTTTGTTTTCAACATGCTCAAGGTAAAACAATAGCATGGCCTGCTGACAGAGTTATTTTTCAAATGGATCAGCAGTCTGACGAACAAGACAATTTATCTATGCCTTCGAGTTCGTACAGCAACTCAAGGAACAAGTGCAAATTATTTGATTGGACTGAAAAAGATGAAATAGTTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

453

Amino Acids

51.4

Weight (kDa)

8.86

Isoelectric Point (pI)

52.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 234
AclWI GGATC 2 cut(s) 1067, 1257
AcsI RAATTY 3 cut(s) 306, 317, 1095
AcuI CTGAAG 1 cut(s) 1071
AcvI CACGTG 1 cut(s) 140
AfaI GTAC 5 cut(s) 198, 387, 399, 664, 1298
AfiI CCNNNNNNNGG 1 cut(s) 580
AflIII ACRYGT 1 cut(s) 394
AgsI TTSAA 8 cut(s) 632, 707, 729, 947, 1003, 1068, 1193, 1244
AhlI ACTAGT 1 cut(s) 671
AjnI CCWGG 2 cut(s) 295, 781
AloI GAACNNNNNNTCC 2 cut(s) 147, 179
AluBI AGCT 3 cut(s) 230, 427, 1015
AluI AGCT 3 cut(s) 230, 427, 1015
AlwI GGATC 2 cut(s) 1067, 1257
Ama87I CYCGRG 2 cut(s) 48, 238
AoxI GGCC 5 cut(s) 376, 549, 585, 1166, 1220
ApoI RAATTY 3 cut(s) 306, 317, 1095
Asp700I GAANNNNTTC 2 cut(s) 606, 653
AspS9I GGNCC 4 cut(s) 263, 377, 549, 1106
AsuHPI GGTGA 6 cut(s) 20, 168, 344, 356, 443, 706
AvaI CYCGRG 2 cut(s) 48, 238
AvaII GGWCC 2 cut(s) 263, 1106
BanII GRGCYC 1 cut(s) 353
BbrPI CACGTG 1 cut(s) 140
BbsI GAAGAC 1 cut(s) 357
BccI CCATC 3 cut(s) 526, 727, 824
BciT130I CCWGG 2 cut(s) 297, 783
BcuI ACTAGT 1 cut(s) 671
BfaI CTAG 2 cut(s) 672, 1019
BfmI CTRYAG 1 cut(s) 231
Bme1390I CCNGG 2 cut(s) 297, 783
Bme18I GGWCC 2 cut(s) 263, 1106
BmeT110I CYCGRG 2 cut(s) 48, 238
BmgT120I GGNCC 4 cut(s) 263, 377, 549, 1106
BmiI GGNNCC 3 cut(s) 264, 294, 1107
BmrFI CCNGG 2 cut(s) 297, 783
BmsI GCATC 3 cut(s) 74, 196, 855
BpiI GAAGAC 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 13, 45
BpuEI CTTGAG 2 cut(s) 1185, 1291
Bsa29I ATCGAT 1 cut(s) 530
BsaAI YACGTR 2 cut(s) 140, 397
BsaJI CCNNGG 1 cut(s) 1101
BsaXI ACNNNNNCTCC 2 cut(s) 597, 627
Bsc4I CCNNNNNNNGG 1 cut(s) 580
Bse3DI GCAATG 1 cut(s) 1122
BseBI CCWGG 2 cut(s) 297, 783
BseCI ATCGAT 1 cut(s) 530
BseDI CCNNGG 1 cut(s) 1101
BseGI GGATG 3 cut(s) 162, 542, 657
BseLI CCNNNNNNNGG 1 cut(s) 580
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 1 cut(s) 366
BseRI GAGGAG 2 cut(s) 500, 977
BshFI GGCC 5 cut(s) 378, 551, 587, 1168, 1222
BshVI ATCGAT 1 cut(s) 530
BsiHKCI CYCGRG 2 cut(s) 48, 238
BslFI GGGAC 1 cut(s) 1119
BslI CCNNNNNNNGG 1 cut(s) 580
BsmFI GGGAC 1 cut(s) 1119
BsmI GAATGC 2 cut(s) 497, 830
BsnI GGCC 5 cut(s) 378, 551, 587, 1168, 1222
BsoBI CYCGRG 2 cut(s) 48, 238
Bsp1286I GDGCHC 1 cut(s) 353
Bsp143I GATC 3 cut(s) 751, 1072, 1249
BspANI GGCC 5 cut(s) 378, 551, 587, 1168, 1222
BspCNI CTCAG 1 cut(s) 365
BspDI ATCGAT 1 cut(s) 530
BspLI GGNNCC 3 cut(s) 264, 294, 1107
BspPI GGATC 2 cut(s) 1067, 1257
BsrDI GCAATG 1 cut(s) 1122
BssECI CCNNGG 1 cut(s) 1101
BssMI GATC 3 cut(s) 751, 1072, 1249
BssT1I CCWWGG 1 cut(s) 1101
Bst2UI CCWGG 2 cut(s) 297, 783
Bst4CI ACNGT 1 cut(s) 216
Bst6I CTCTTC 3 cut(s) 799, 954, 1074
BstAPI GCANNNNNTGC 1 cut(s) 1223
BstBAI YACGTR 2 cut(s) 140, 397
BstC8I GCNNGC 2 cut(s) 1013, 1224
BstDEI CTNAG 6 cut(s) 352, 621, 766, 791, 843, 861
BstF5I GGATG 3 cut(s) 162, 542, 657
BstKTI GATC 3 cut(s) 754, 1075, 1252
BstMBI GATC 3 cut(s) 751, 1072, 1249
BstMWI GCNNNNNNNGC 4 cut(s) 11, 53, 62, 1223
BstNI CCWGG 2 cut(s) 297, 783
BstNSI RCATGY 4 cut(s) 47, 857, 889, 1199
BstSCI CCNGG 2 cut(s) 295, 781
BstSFI CTRYAG 1 cut(s) 231
BstV2I GAAGAC 1 cut(s) 357
Bsu15I ATCGAT 1 cut(s) 530
BsuRI GGCC 5 cut(s) 378, 551, 587, 1168, 1222
BsuTUI ATCGAT 1 cut(s) 530
BtsCI GGATG 3 cut(s) 162, 542, 657
Cac8I GCNNGC 2 cut(s) 1013, 1224
Cfr13I GGNCC 4 cut(s) 263, 377, 549, 1106
ClaI ATCGAT 1 cut(s) 530
CseI GACGC 1 cut(s) 973
Csp6I GTAC 5 cut(s) 197, 386, 398, 663, 1297
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviAII CATG 9 cut(s) 44, 80, 311, 339, 854, 886, 1126, 1196, 1218
CviQI GTAC 5 cut(s) 197, 386, 398, 663, 1297
DdeI CTNAG 6 cut(s) 352, 621, 766, 791, 843, 861
DpnI GATC 3 cut(s) 753, 1074, 1251
DpnII GATC 3 cut(s) 751, 1072, 1249
DraI TTTAAA 1 cut(s) 526
Eam1104I CTCTTC 3 cut(s) 799, 954, 1074
EarI CTCTTC 3 cut(s) 799, 954, 1074
Eco130I CCWWGG 1 cut(s) 1101
Eco147I AGGCCT 1 cut(s) 1168
Eco24I GRGCYC 1 cut(s) 353
Eco32I GATATC 1 cut(s) 1135
Eco47I GGWCC 2 cut(s) 263, 1106
Eco57I CTGAAG 1 cut(s) 1071
Eco72I CACGTG 1 cut(s) 140
Eco88I CYCGRG 2 cut(s) 48, 238
EcoO109I RGGNCCY 2 cut(s) 549, 1106
EcoRI GAATTC 1 cut(s) 306
EcoRII CCWGG 2 cut(s) 295, 781
EcoRV GATATC 1 cut(s) 1135
EcoT14I CCWWGG 1 cut(s) 1101
EcoT38I GRGCYC 1 cut(s) 353
ErhI CCWWGG 1 cut(s) 1101
FaeI CATG 9 cut(s) 47, 83, 314, 342, 857, 889, 1129, 1199, 1221
FaqI GGGAC 1 cut(s) 1119
FatI CATG 9 cut(s) 43, 79, 310, 338, 853, 885, 1125, 1195, 1217
FblI GTMKAC 1 cut(s) 234
FokI GGATG 3 cut(s) 149, 549, 644
FriOI GRGCYC 1 cut(s) 353
FspBI CTAG 2 cut(s) 672, 1019
HaeIII GGCC 5 cut(s) 378, 551, 587, 1168, 1222
HgaI GACGC 1 cut(s) 973
Hin1II CATG 9 cut(s) 47, 83, 314, 342, 857, 889, 1129, 1199, 1221
HincII GTYRAC 1 cut(s) 988
HindII GTYRAC 1 cut(s) 988
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 5 cut(s) 148, 224, 612, 943, 1082
HphI GGTGA 6 cut(s) 20, 168, 344, 356, 443, 706
Hpy166II GTNNAC 3 cut(s) 235, 335, 988
Hpy188I TCNGA 2 cut(s) 840, 1261
Hpy188III TCNNGA 5 cut(s) 50, 110, 122, 152, 1076
Hpy8I GTNNAC 3 cut(s) 235, 335, 988
HpyAV CCTTC 3 cut(s) 189, 1046, 1296
HpyCH4III ACNGT 1 cut(s) 216
HpyCH4IV ACGT 2 cut(s) 139, 396
HpyCH4V TGCA 7 cut(s) 14, 209, 868, 889, 1011, 1115, 1320
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 53, 62, 1223
HpyF3I CTNAG 6 cut(s) 352, 621, 766, 791, 843, 861
HpySE526I ACGT 2 cut(s) 139, 396
Hsp92II CATG 9 cut(s) 47, 83, 314, 342, 857, 889, 1129, 1199, 1221
Kzo9I GATC 3 cut(s) 751, 1072, 1249
LmnI GCTCC 1 cut(s) 292
LweI GCATC 3 cut(s) 74, 196, 855
MaeI CTAG 2 cut(s) 672, 1019
MaeII ACGT 2 cut(s) 139, 396
MaeIII GTNAC 2 cut(s) 216, 403
MalI GATC 3 cut(s) 753, 1074, 1251
MboI GATC 3 cut(s) 751, 1072, 1249
MboII GAAGA 7 cut(s) 215, 357, 717, 758, 816, 971, 1091
MhlI GDGCHC 1 cut(s) 353
MluCI AATT 9 cut(s) 306, 317, 462, 824, 879, 926, 1095, 1273, 1322
MlyI GAGTC 3 cut(s) 157, 606, 1091
MmeI TCCRAC 3 cut(s) 190, 290, 640
MroXI GAANNNNTTC 2 cut(s) 606, 653
MseI TTAA 4 cut(s) 131, 525, 684, 882
MspA1I CMGCKG 1 cut(s) 230
MspR9I CCNGG 2 cut(s) 297, 783
Mva1269I GAATGC 2 cut(s) 497, 830
MvaI CCWGG 2 cut(s) 297, 783
MwoI GCNNNNNNNGC 4 cut(s) 11, 53, 62, 1223
NdeII GATC 3 cut(s) 751, 1072, 1249
NlaIII CATG 9 cut(s) 47, 83, 314, 342, 857, 889, 1129, 1199, 1221
NlaIV GGNNCC 3 cut(s) 264, 294, 1107
NmuCI GTSAC 1 cut(s) 216
NspI RCATGY 4 cut(s) 47, 857, 889, 1199
PceI AGGCCT 1 cut(s) 1168
PctI GAATGC 2 cut(s) 497, 830
PdmI GAANNNNTTC 2 cut(s) 606, 653
PfeI GAWTC 2 cut(s) 224, 943
PleI GAGTC 3 cut(s) 156, 606, 1090
PmaCI CACGTG 1 cut(s) 140
PmlI CACGTG 1 cut(s) 140
PpsI GAGTC 3 cut(s) 156, 606, 1090
Ppu21I YACGTR 2 cut(s) 140, 397
PpuMI RGGWCCY 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 1106
Psp6I CCWGG 2 cut(s) 295, 781
PspCI CACGTG 1 cut(s) 140
PspGI CCWGG 2 cut(s) 295, 781
PspN4I GGNNCC 3 cut(s) 264, 294, 1107
PspPI GGNCC 4 cut(s) 263, 377, 549, 1106
PspPPI RGGWCCY 1 cut(s) 1106
PvuII CAGCTG 1 cut(s) 230
RsaI GTAC 5 cut(s) 198, 387, 399, 664, 1298
RsaNI GTAC 5 cut(s) 197, 386, 398, 663, 1297
SaqAI TTAA 4 cut(s) 131, 525, 684, 882
Sau3AI GATC 3 cut(s) 751, 1072, 1249
Sau96I GGNCC 4 cut(s) 263, 377, 549, 1106
SchI GAGTC 3 cut(s) 157, 606, 1091
ScrFI CCNGG 2 cut(s) 297, 783
SduI GDGCHC 1 cut(s) 353
SfaNI GCATC 3 cut(s) 74, 196, 855
SfcI CTRYAG 1 cut(s) 231
SinI GGWCC 2 cut(s) 263, 1106
SmiI ATTTAAAT 1 cut(s) 526
SmlI CTYRAG 2 cut(s) 1200, 1306
SmoI CTYRAG 2 cut(s) 1200, 1306
SpeI ACTAGT 1 cut(s) 671
Sse9I AATT 9 cut(s) 306, 317, 462, 824, 879, 926, 1095, 1273, 1322
SseBI AGGCCT 1 cut(s) 1168
SspMI CTAG 2 cut(s) 672, 1019
StuI AGGCCT 1 cut(s) 1168
StyD4I CCNGG 2 cut(s) 295, 781
StyI CCWWGG 1 cut(s) 1101
SwaI ATTTAAAT 1 cut(s) 526
TaaI ACNGT 1 cut(s) 216
TaiI ACGT 2 cut(s) 142, 399
TaqI TCGA 4 cut(s) 304, 530, 610, 1289
TasI AATT 9 cut(s) 306, 317, 462, 824, 879, 926, 1095, 1273, 1322
TfiI GAWTC 2 cut(s) 224, 943
Tru1I TTAA 4 cut(s) 131, 525, 684, 882
Tru9I TTAA 4 cut(s) 131, 525, 684, 882
TseFI GTSAC 1 cut(s) 216
Tsp45I GTSAC 1 cut(s) 216
TspDTI ATGAA 7 cut(s) 290, 299, 646, 1107, 1133, 1347, 1362
TspGWI ACGGA 1 cut(s) 650
VpaK11BI GGWCC 2 cut(s) 263, 1106
XapI RAATTY 3 cut(s) 306, 317, 1095
XceI RCATGY 4 cut(s) 47, 857, 889, 1199
XcmI CCANNNNNNNNNTGG 2 cut(s) 190, 823
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 2 cut(s) 606, 653
XspI CTAG 2 cut(s) 672, 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.