DNA-directed 5'-3' RNA polymerase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 446 |
| AgsI | TTSAA | 4 cut(s) | 140, 179, 241, 470 |
| AjnI | CCWGG | 1 cut(s) | 439 |
| AluBI | AGCT | 4 cut(s) | 55, 244, 319, 366 |
| AluI | AGCT | 4 cut(s) | 55, 244, 319, 366 |
| Alw21I | GWGCWC | 1 cut(s) | 29 |
| AoxI | GGCC | 2 cut(s) | 3, 15 |
| ApeKI | GCWGC | 3 cut(s) | 49, 52, 214 |
| Bbv12I | GWGCWC | 1 cut(s) | 29 |
| BbvI | GCAGC | 3 cut(s) | 36, 64, 201 |
| BccI | CCATC | 3 cut(s) | 83, 371, 439 |
| BciT130I | CCWGG | 1 cut(s) | 441 |
| BfaI | CTAG | 1 cut(s) | 320 |
| BfmI | CTRYAG | 1 cut(s) | 50 |
| BisI | GCNGC | 3 cut(s) | 50, 53, 215 |
| BlsI | GCNGC | 3 cut(s) | 51, 54, 216 |
| Bme1390I | CCNGG | 1 cut(s) | 441 |
| BmrFI | CCNGG | 1 cut(s) | 441 |
| BmsI | GCATC | 1 cut(s) | 125 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 59, 91 |
| BpmI | CTGGAG | 2 cut(s) | 43, 364 |
| BsaJI | CCNNGG | 1 cut(s) | 12 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 308, 338 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 446 |
| BseBI | CCWGG | 1 cut(s) | 441 |
| BseDI | CCNNGG | 1 cut(s) | 12 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 446 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseRI | GAGGAG | 1 cut(s) | 83 |
| BseXI | GCAGC | 3 cut(s) | 36, 64, 201 |
| BshFI | GGCC | 2 cut(s) | 5, 17 |
| BsiHKAI | GWGCWC | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 446 |
| BsnI | GGCC | 2 cut(s) | 5, 17 |
| Bsp1286I | GDGCHC | 1 cut(s) | 29 |
| BspANI | GGCC | 2 cut(s) | 5, 17 |
| BspCNI | CTCAG | 1 cut(s) | 22 |
| BspMAI | CTGCAG | 1 cut(s) | 54 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BssECI | CCNNGG | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 1 cut(s) | 441 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 3 cut(s) | 62, 81, 415 |
| BstDEI | CTNAG | 2 cut(s) | 30, 170 |
| BstDSI | CCRYGG | 1 cut(s) | 12 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 61 |
| BstNI | CCWGG | 1 cut(s) | 441 |
| BstSCI | CCNGG | 1 cut(s) | 439 |
| BstSFI | CTRYAG | 1 cut(s) | 50 |
| BstV1I | GCAGC | 3 cut(s) | 36, 64, 201 |
| BsuRI | GGCC | 2 cut(s) | 5, 17 |
| BtgI | CCRYGG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 1 cut(s) | 27 |
| Cac8I | GCNNGC | 3 cut(s) | 62, 81, 415 |
| CviAII | CATG | 1 cut(s) | 65 |
| DdeI | CTNAG | 2 cut(s) | 30, 170 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| EcoRII | CCWGG | 1 cut(s) | 439 |
| FaeI | CATG | 1 cut(s) | 68 |
| FaiI | YATR | 7 cut(s) | 66, 191, 212, 360, 372, 401, 420 |
| FatI | CATG | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 3 cut(s) | 50, 53, 215 |
| Fsp4HI | GCNGC | 3 cut(s) | 50, 53, 215 |
| FspBI | CTAG | 1 cut(s) | 320 |
| GluI | GCNGC | 3 cut(s) | 50, 53, 215 |
| GsuI | CTGGAG | 2 cut(s) | 43, 364 |
| HaeIII | GGCC | 2 cut(s) | 5, 17 |
| Hin1II | CATG | 1 cut(s) | 68 |
| HindIII | AAGCTT | 1 cut(s) | 242 |
| HinfI | GANTC | 6 cut(s) | 74, 128, 182, 203, 254, 323 |
| Hpy188I | TCNGA | 1 cut(s) | 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 22 |
| HpyAV | CCTTC | 3 cut(s) | 28, 437, 473 |
| HpyCH4V | TGCA | 6 cut(s) | 52, 60, 116, 189, 217, 476 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 61 |
| HpyF3I | CTNAG | 2 cut(s) | 30, 170 |
| Hsp92II | CATG | 1 cut(s) | 68 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 2 cut(s) | 24, 316 |
| LpnPI | CCDG | 7 cut(s) | 7, 65, 176, 328, 399, 426, 453 |
| Lsp1109I | GCAGC | 3 cut(s) | 36, 64, 201 |
| LweI | GCATC | 1 cut(s) | 125 |
| MaeI | CTAG | 1 cut(s) | 320 |
| MboII | GAAGA | 2 cut(s) | 128, 191 |
| MhlI | GDGCHC | 1 cut(s) | 29 |
| MluCI | AATT | 5 cut(s) | 207, 281, 444, 463, 471 |
| MlyI | GAGTC | 4 cut(s) | 68, 122, 212, 332 |
| MnlI | CCTC | 6 cut(s) | 16, 25, 61, 64, 255, 306 |
| MseI | TTAA | 1 cut(s) | 284 |
| MspR9I | CCNGG | 1 cut(s) | 441 |
| MvaI | CCWGG | 1 cut(s) | 441 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 61 |
| NlaIII | CATG | 1 cut(s) | 68 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PfeI | GAWTC | 2 cut(s) | 182, 254 |
| PfoI | TCCNGGA | 1 cut(s) | 439 |
| PkrI | GCNGC | 3 cut(s) | 51, 54, 216 |
| PleI | GAGTC | 4 cut(s) | 68, 122, 211, 331 |
| PpsI | GAGTC | 4 cut(s) | 68, 122, 211, 331 |
| Psp6I | CCWGG | 1 cut(s) | 439 |
| PspGI | CCWGG | 1 cut(s) | 439 |
| PstI | CTGCAG | 1 cut(s) | 54 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SaqAI | TTAA | 1 cut(s) | 284 |
| SatI | GCNGC | 3 cut(s) | 50, 53, 215 |
| SchI | GAGTC | 4 cut(s) | 68, 122, 212, 332 |
| ScrFI | CCNGG | 1 cut(s) | 441 |
| SduI | GDGCHC | 1 cut(s) | 29 |
| SetI | ASST | 8 cut(s) | 57, 154, 165, 226, 239, 246, 321, 368 |
| SfaNI | GCATC | 1 cut(s) | 125 |
| SfcI | CTRYAG | 1 cut(s) | 50 |
| Sse9I | AATT | 5 cut(s) | 207, 281, 444, 463, 471 |
| SspI | AATATT | 1 cut(s) | 44 |
| SspMI | CTAG | 1 cut(s) | 320 |
| StyD4I | CCNGG | 1 cut(s) | 439 |
| TasI | AATT | 5 cut(s) | 207, 281, 444, 463, 471 |
| TfiI | GAWTC | 2 cut(s) | 182, 254 |
| Tru1I | TTAA | 1 cut(s) | 284 |
| Tru9I | TTAA | 1 cut(s) | 284 |
| TscAI | CASTG | 1 cut(s) | 34 |
| TseI | GCWGC | 3 cut(s) | 49, 52, 214 |
| TspRI | CASTG | 1 cut(s) | 34 |
| XspI | CTAG | 1 cut(s) | 320 |