Rh7CG255900

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000089
Physical Location & Seq
Forward (+)
24779763 .. 24784751
4989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG255900.1

Sequence Viewer

Length: 1860 bp
ATGGCTGGTGATGCAAAGATGAGAAGTTCTCACAAGAGGAAACATGCTCGGGAAGCCACACAAGCATCAAAGGTTTCTCATGTAGGGGATAAGAATATACAAGTTAGTCCAGAACTATGTCAAGATACATTAAAACCATGTGATGAGAGTCCACAACCTAACATCCAACACCACTCACCTTCCACAAAAGAAGTGGTACAAGAAGATGCACCACCGTCACAAGATTCAGCTGTAGACCCGAGAGGACTTAAGAAAACTAGGGGTCCAACGAAAATGAAAGATATTGCTGTGGAGCCTGGAAGTCGAATTCATGTTGAATTTACTGATAAAGGTGAACCATGTGGTGAGGGCTCAGTTAGTTTGTCTTCTTATTTAGGCCCACTTGTACGAGAACACGTACCTGTAACACTCCACGATTGGAGGAAGCTTGGTGATGACATAAAAATAGTTTTGTGGAAATCAATTCAGGCAAGATTTGACTTGGAGGAGGAATGGCAGAAGGCTGTCGAGGCCAAAAACAAAGGAGAAAGACTTCGACTCCAACCTAAGAACATTCAAAGTAGAGCAGAGTGGAAAAGGTTCATCCGTGCAAAAACTAGTCCAGCATTTAAGGCTGTCAGTGATAAGTATAAGGCAATTAGGCGCAAGCAAATCCCACACACATGTAGCCGAAAAGGAATGGCTCGATTGGCAGAAGATATGAAAAGGAATAGTGCCGACCCTTCTTCTGTATCTAGAGTTAAAGTTTGGATCAGATCACGTACCAGAAAGGACGGTAAACCAGTAAACACTGAAGTTTCTGAAACTATAGAGAGGGTGAATGTAGTTGAAAGTGATTTGCCATCATCCTCAACAACTAATGTGAGAGAAGATGCTCTGTCTAAAGTCTTAGGACACGATAAACCTGGACGACTAAGAGGAATGGGAAGAGGAATGACCATCAGCAAATTGGCATTCTTTCAGACTAAGGACAAGCATGTGGCTAAGATGCAAGAGCAACAAATTAACATGCAAGACAGGATAAATCATTTGGAGAACTTGGTCAATAAATTAGTGAAAAATAAGGAAGAGGAGAAAACATCTCCAATGAGCGTCAACACCAACTCATTGAATAAGTGCAAGCTACTAGATTGGAGTGGAACAGAGGACATTGTTGCTGAAGGTCGTTGGGTTTCAAGTGATCCAGAAGAGTCTGTCAATGAAATTCCCTTGGGACCTAATGCAATGAAAGTCTTGGTTGATATCTCAAATAAACCAGATGCTTTTCTTTGGAGGCCTACATCTAATATGTTTTGTTTTCAACATGCTCAAGGTAAAACAATAGCATGGCCTGCTGACAAAGTTATTTTTCAAATGGATCAGCAGTCTGACGAACAAGACAATTTATCTATGCCTTCGAATTCGTACAGCAACTCAAGGAACAAGTGCAAATTATTTGATTGGACTGGAAAAGATGAAATAGTTGCAGAAGGACGTTGGCATTCAAGTGATCCAAAAGCGTTGGTAAATGGTATTCCTCTTGGACCTAATGCCATGATAGTTTGGGTAGATATTCCAAAGAATCATGAAGCGTTTTTATGGAGGCCTACAATTGATATGACATGCATTGAAGATGCCGTGAATTCTGCTATAGCATGGCCTGCTAACAAAGTTGTTTTGGAAAAGATATCAGAAAGTCAAGATGGTGAAATTGCATCCTCTCCTTCGAGTGTCAACTCCAAATCAAAGAAAAGGTGCAAGTTGTTGGATGTTAGTGGATCGGGACAAATAGTTGCTGAAGGACTTCAAACACTATCTCGTTGGAGATCACAACACACCCGTCCGGCAGTATCCACCTCATCCACCATGACTAGCGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

619

Amino Acids

69.31

Weight (kDa)

9.21

Isoelectric Point (pI)

51.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 191 - 312 1.9e-21 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 472 - 553 4e-07 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 234
AclWI GGATC 5 cut(s) 758, 1175, 1365, 1484, 1765
AcsI RAATTY 5 cut(s) 306, 317, 1203, 1399, 1621
AcuI CTGAAG 3 cut(s) 813, 1179, 1797
AfaI GTAC 5 cut(s) 198, 387, 399, 763, 1406
AflII CTTAAG 1 cut(s) 248
AflIII ACRYGT 2 cut(s) 394, 662
AhlI ACTAGT 1 cut(s) 596
AjnI CCWGG 2 cut(s) 295, 904
AluBI AGCT 3 cut(s) 230, 427, 1123
AluI AGCT 3 cut(s) 230, 427, 1123
AlwI GGATC 5 cut(s) 758, 1175, 1365, 1484, 1765
Ama87I CYCGRG 2 cut(s) 48, 238
AoxI GGCC 6 cut(s) 376, 510, 1274, 1328, 1583, 1637
ApoI RAATTY 5 cut(s) 306, 317, 1203, 1399, 1621
Asp700I GAANNNNTTC 3 cut(s) 531, 578, 1782
AspLEI GCGC 2 cut(s) 645, 1856
AspS9I GGNCC 4 cut(s) 263, 377, 1214, 1523
AsuHPI GGTGA 7 cut(s) 20, 168, 344, 356, 443, 829, 1697
AsuII TTCGAA 1 cut(s) 1397
AvaI CYCGRG 2 cut(s) 48, 238
AvaII GGWCC 3 cut(s) 263, 1214, 1523
BanII GRGCYC 1 cut(s) 353
BbsI GAAGAC 1 cut(s) 357
BccI CCATC 3 cut(s) 850, 947, 1676
BceAI ACGGC 1 cut(s) 1601
BciT130I CCWGG 2 cut(s) 297, 906
BciVI GTATCC 1 cut(s) 1840
BcuI ACTAGT 1 cut(s) 596
BfaI CTAG 6 cut(s) 258, 597, 735, 1127, 1851, 1858
BfmI CTRYAG 3 cut(s) 231, 807, 1629
BfoI RGCGCY 1 cut(s) 1857
BfrI CTTAAG 1 cut(s) 248
BfuI GTATCC 1 cut(s) 1840
Bme1390I CCNGG 2 cut(s) 297, 906
Bme18I GGWCC 3 cut(s) 263, 1214, 1523
BmeT110I CYCGRG 2 cut(s) 48, 238
BmgT120I GGNCC 4 cut(s) 263, 377, 1214, 1523
BmiI GGNNCC 3 cut(s) 264, 294, 1215
BmrFI CCNGG 2 cut(s) 297, 906
BmsI GCATC 7 cut(s) 74, 196, 862, 978, 1249, 1603, 1703
BpiI GAAGAC 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 13, 45
Bpu14I TTCGAA 1 cut(s) 1397
BpuEI CTTGAG 2 cut(s) 1293, 1399
BsaAI YACGTR 2 cut(s) 397, 761
BsaJI CCNNGG 1 cut(s) 1209
BsaXI ACNNNNNCTCC 2 cut(s) 522, 552
Bse1I ACTGG 2 cut(s) 782, 1450
Bse3DI GCAATG 1 cut(s) 1230
BseBI CCWGG 2 cut(s) 297, 906
BseDI CCNNGG 1 cut(s) 1209
BseGI GGATG 6 cut(s) 162, 582, 845, 1694, 1753, 1838
BseMI GCAATG 1 cut(s) 1230
BseMII CTCAG 1 cut(s) 366
BseNI ACTGG 2 cut(s) 782, 1450
BseRI GAGGAG 2 cut(s) 500, 1085
BshFI GGCC 6 cut(s) 378, 512, 1276, 1330, 1585, 1639
BsiHKCI CYCGRG 2 cut(s) 48, 238
BsiSI CCGG 1 cut(s) 1823
BslFI GGGAC 2 cut(s) 1227, 1776
BsmFI GGGAC 2 cut(s) 1227, 1776
BsmI GAATGC 2 cut(s) 953, 1480
BsnI GGCC 6 cut(s) 378, 512, 1276, 1330, 1585, 1639
BsoBI CYCGRG 2 cut(s) 48, 238
Bsp119I TTCGAA 1 cut(s) 1397
Bsp1286I GDGCHC 1 cut(s) 353
Bsp143I GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
BspANI GGCC 6 cut(s) 378, 512, 1276, 1330, 1585, 1639
BspCNI CTCAG 1 cut(s) 365
BspHI TCATGA 1 cut(s) 1564
BspLI GGNNCC 3 cut(s) 264, 294, 1215
BspPI GGATC 5 cut(s) 758, 1175, 1365, 1484, 1765
BspT104I TTCGAA 1 cut(s) 1397
BspTI CTTAAG 1 cut(s) 248
BsrDI GCAATG 1 cut(s) 1230
BsrI ACTGG 2 cut(s) 782, 1450
BssECI CCNNGG 1 cut(s) 1209
BssMI GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
BssT1I CCWWGG 1 cut(s) 1209
Bst2UI CCWGG 2 cut(s) 297, 906
Bst4CI ACNGT 2 cut(s) 216, 776
Bst6I CTCTTC 3 cut(s) 922, 1062, 1182
BstAFI CTTAAG 1 cut(s) 248
BstAPI GCANNNNNTGC 2 cut(s) 1331, 1640
BstBAI YACGTR 2 cut(s) 397, 761
BstBI TTCGAA 1 cut(s) 1397
BstC8I GCNNGC 4 cut(s) 647, 1121, 1332, 1641
BstDEI CTNAG 6 cut(s) 352, 546, 889, 914, 966, 984
BstF5I GGATG 6 cut(s) 162, 582, 845, 1694, 1753, 1838
BstH2I RGCGCY 1 cut(s) 1857
BstHHI GCGC 2 cut(s) 645, 1856
BstKTI GATC 7 cut(s) 753, 758, 1183, 1360, 1492, 1760, 1808
BstMBI GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
BstMWI GCNNNNNNNGC 8 cut(s) 11, 53, 62, 509, 611, 689, 1331, 1640
BstNI CCWGG 2 cut(s) 297, 906
BstNSI RCATGY 6 cut(s) 47, 666, 980, 1012, 1307, 1605
BstSCI CCNGG 2 cut(s) 295, 904
BstSFI CTRYAG 3 cut(s) 231, 807, 1629
BstV2I GAAGAC 1 cut(s) 357
BsuI GTATCC 1 cut(s) 1840
BsuRI GGCC 6 cut(s) 378, 512, 1276, 1330, 1585, 1639
BtsCI GGATG 6 cut(s) 162, 582, 845, 1694, 1753, 1838
BtsIMutI CAGTG 2 cut(s) 625, 789
Cac8I GCNNGC 4 cut(s) 647, 1121, 1332, 1641
CciI TCATGA 1 cut(s) 1564
CfoI GCGC 2 cut(s) 645, 1856
Cfr13I GGNCC 4 cut(s) 263, 377, 1214, 1523
CseI GACGC 1 cut(s) 1081
Csp6I GTAC 5 cut(s) 197, 386, 398, 762, 1405
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviQI GTAC 5 cut(s) 197, 386, 398, 762, 1405
DdeI CTNAG 6 cut(s) 352, 546, 889, 914, 966, 984
DpnI GATC 7 cut(s) 752, 757, 1182, 1359, 1491, 1759, 1807
DpnII GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
Eam1104I CTCTTC 3 cut(s) 922, 1062, 1182
EarI CTCTTC 3 cut(s) 922, 1062, 1182
Eco130I CCWWGG 1 cut(s) 1209
Eco147I AGGCCT 2 cut(s) 1276, 1585
Eco24I GRGCYC 1 cut(s) 353
Eco32I GATATC 2 cut(s) 1243, 1668
Eco47I GGWCC 3 cut(s) 263, 1214, 1523
Eco57I CTGAAG 3 cut(s) 813, 1179, 1797
Eco88I CYCGRG 2 cut(s) 48, 238
EcoO109I RGGNCCY 1 cut(s) 1214
EcoRI GAATTC 3 cut(s) 306, 1399, 1621
EcoRII CCWGG 2 cut(s) 295, 904
EcoRV GATATC 2 cut(s) 1243, 1668
EcoT14I CCWWGG 1 cut(s) 1209
EcoT22I ATGCAT 1 cut(s) 1607
EcoT38I GRGCYC 1 cut(s) 353
ErhI CCWWGG 1 cut(s) 1209
FaqI GGGAC 2 cut(s) 1227, 1776
FblI GTMKAC 1 cut(s) 234
FokI GGATG 6 cut(s) 149, 569, 832, 1681, 1760, 1825
FriOI GRGCYC 1 cut(s) 353
FspBI CTAG 6 cut(s) 258, 597, 735, 1127, 1851, 1858
GlaI GCGC 2 cut(s) 644, 1855
HaeII RGCGCY 1 cut(s) 1857
HaeIII GGCC 6 cut(s) 378, 512, 1276, 1330, 1585, 1639
HapII CCGG 1 cut(s) 1823
HgaI GACGC 1 cut(s) 1081
HhaI GCGC 2 cut(s) 645, 1856
Hin6I GCGC 2 cut(s) 643, 1854
HinP1I GCGC 2 cut(s) 643, 1854
HincII GTYRAC 2 cut(s) 1096, 1714
HindII GTYRAC 2 cut(s) 1096, 1714
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 5 cut(s) 148, 224, 537, 1190, 1561
HpaII CCGG 1 cut(s) 1823
HphI GGTGA 7 cut(s) 20, 168, 344, 356, 443, 829, 1697
Hpy166II GTNNAC 7 cut(s) 152, 235, 335, 779, 787, 1096, 1714
Hpy188I TCNGA 5 cut(s) 755, 802, 963, 1369, 1672
Hpy188III TCNNGA 8 cut(s) 50, 110, 122, 735, 1184, 1565, 1679, 1761
Hpy8I GTNNAC 7 cut(s) 152, 235, 335, 779, 787, 1096, 1714
HpyAV CCTTC 8 cut(s) 189, 493, 732, 1154, 1404, 1463, 1713, 1772
HpyCH4III ACNGT 2 cut(s) 216, 776
HpyCH4IV ACGT 3 cut(s) 396, 760, 1474
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 53, 62, 509, 611, 689, 1331, 1640
HpyF3I CTNAG 6 cut(s) 352, 546, 889, 914, 966, 984
HpySE526I ACGT 3 cut(s) 396, 760, 1474
HspAI GCGC 2 cut(s) 643, 1854
Kzo9I GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
LmnI GCTCC 1 cut(s) 292
LweI GCATC 7 cut(s) 74, 196, 862, 978, 1249, 1603, 1703
MaeI CTAG 6 cut(s) 258, 597, 735, 1127, 1851, 1858
MaeII ACGT 3 cut(s) 396, 760, 1474
MaeIII GTNAC 2 cut(s) 216, 403
MalI GATC 7 cut(s) 752, 757, 1182, 1359, 1491, 1759, 1807
MboI GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
MboII GAAGA 9 cut(s) 215, 357, 707, 717, 881, 939, 1079, 1199, 1622
MfeI CAATTG 1 cut(s) 1590
MhlI GDGCHC 1 cut(s) 353
MlyI GAGTC 3 cut(s) 157, 531, 1199
MmeI TCCRAC 5 cut(s) 190, 290, 565, 1725, 1781
Mph1103I ATGCAT 1 cut(s) 1607
MroXI GAANNNNTTC 3 cut(s) 531, 578, 1782
MseI TTAA 5 cut(s) 131, 249, 609, 741, 1005
MslI CAYNNNNRTG 2 cut(s) 661, 1485
MspA1I CMGCKG 1 cut(s) 230
MspCI CTTAAG 1 cut(s) 248
MspI CCGG 1 cut(s) 1823
MspR9I CCNGG 2 cut(s) 297, 906
MunI CAATTG 1 cut(s) 1590
Mva1269I GAATGC 2 cut(s) 953, 1480
MvaI CCWGG 2 cut(s) 297, 906
MwoI GCNNNNNNNGC 8 cut(s) 11, 53, 62, 509, 611, 689, 1331, 1640
NdeII GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
NlaIV GGNNCC 3 cut(s) 264, 294, 1215
NmuCI GTSAC 1 cut(s) 216
NsiI ATGCAT 1 cut(s) 1607
NspI RCATGY 6 cut(s) 47, 666, 980, 1012, 1307, 1605
NspV TTCGAA 1 cut(s) 1397
PagI TCATGA 1 cut(s) 1564
PceI AGGCCT 2 cut(s) 1276, 1585
PciI ACATGT 1 cut(s) 662
PctI GAATGC 2 cut(s) 953, 1480
PdmI GAANNNNTTC 3 cut(s) 531, 578, 1782
PfeI GAWTC 2 cut(s) 224, 1561
PleI GAGTC 3 cut(s) 156, 531, 1198
PpsI GAGTC 3 cut(s) 156, 531, 1198
Ppu21I YACGTR 2 cut(s) 397, 761
PpuMI RGGWCCY 1 cut(s) 1214
PscI ACATGT 1 cut(s) 662
Psp5II RGGWCCY 1 cut(s) 1214
Psp6I CCWGG 2 cut(s) 295, 904
PspGI CCWGG 2 cut(s) 295, 904
PspN4I GGNNCC 3 cut(s) 264, 294, 1215
PspPI GGNCC 4 cut(s) 263, 377, 1214, 1523
PspPPI RGGWCCY 1 cut(s) 1214
PvuII CAGCTG 1 cut(s) 230
RsaI GTAC 5 cut(s) 198, 387, 399, 763, 1406
RsaNI GTAC 5 cut(s) 197, 386, 398, 762, 1405
RseI CAYNNNNRTG 2 cut(s) 661, 1485
SaqAI TTAA 5 cut(s) 131, 249, 609, 741, 1005
Sau3AI GATC 7 cut(s) 750, 755, 1180, 1357, 1489, 1757, 1805
Sau96I GGNCC 4 cut(s) 263, 377, 1214, 1523
SchI GAGTC 3 cut(s) 157, 531, 1199
ScrFI CCNGG 2 cut(s) 297, 906
SduI GDGCHC 1 cut(s) 353
SfaNI GCATC 7 cut(s) 74, 196, 862, 978, 1249, 1603, 1703
SfcI CTRYAG 3 cut(s) 231, 807, 1629
SfuI TTCGAA 1 cut(s) 1397
SinI GGWCC 3 cut(s) 263, 1214, 1523
SmiMI CAYNNNNRTG 2 cut(s) 661, 1485
SmlI CTYRAG 3 cut(s) 248, 1308, 1414
SmoI CTYRAG 3 cut(s) 248, 1308, 1414
SpeI ACTAGT 1 cut(s) 596
SseBI AGGCCT 2 cut(s) 1276, 1585
SspMI CTAG 6 cut(s) 258, 597, 735, 1127, 1851, 1858
StuI AGGCCT 2 cut(s) 1276, 1585
StyD4I CCNGG 2 cut(s) 295, 904
StyI CCWWGG 1 cut(s) 1209
TaaI ACNGT 2 cut(s) 216, 776
TaiI ACGT 3 cut(s) 399, 763, 1477
TaqI TCGA 6 cut(s) 304, 507, 535, 685, 1397, 1706
TfiI GAWTC 2 cut(s) 224, 1561
Tru1I TTAA 5 cut(s) 131, 249, 609, 741, 1005
Tru9I TTAA 5 cut(s) 131, 249, 609, 741, 1005
TscAI CASTG 2 cut(s) 625, 796
TseFI GTSAC 1 cut(s) 216
Tsp45I GTSAC 1 cut(s) 216
TspDTI ATGAA 8 cut(s) 290, 299, 571, 716, 1215, 1241, 1470, 1581
TspGWI ACGGA 1 cut(s) 575
TspRI CASTG 2 cut(s) 625, 796
Vha464I CTTAAG 1 cut(s) 248
VpaK11BI GGWCC 3 cut(s) 263, 1214, 1523
XapI RAATTY 5 cut(s) 306, 317, 1203, 1399, 1621
XbaI TCTAGA 1 cut(s) 734
XceI RCATGY 6 cut(s) 47, 666, 980, 1012, 1307, 1605
XcmI CCANNNNNNNNNTGG 2 cut(s) 190, 946
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 3 cut(s) 531, 578, 1782
XspI CTAG 6 cut(s) 258, 597, 735, 1127, 1851, 1858
Zsp2I ATGCAT 1 cut(s) 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.