RchiOBHm_Chr3g0460621

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000089
Physical Location & Seq
Reverse (-)
8660284 .. 8670694
10411 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42713

Sequence Viewer

Length: 2052 bp
ATGGCTAGTGATGCAAAGATGAGAAGTTCTCACAAGAGGAAACATGCTCGGGAAGCCACACAAGCATCAAAGGTTTCTCATGTAGGGGATAAGAATATACAAGTTAGTCCAGAACTATGTCAAGATACATTAAAACCATGCGATGAGAGTCCAGAACCTAACATCCAACACCACTCACCTTCCACAAAAGAAGTGGTACAAGAAGATGCACCACCATCACAAGATTCAGCTGCAGACCCGAGAGGACTTAAGAAAACTAGAGGTCCAACGAAAATGAAAGATATTGCTGTGGAGCCTGGAAGTCGAATTCATGTTGAATTTACTGATAAAGGTGAACCATGTGGTGAGGGCTCAGTTAGTTTGTCTTCTTATTTAGGCCCACTTGTACGAGAACATGTATCTGTAACACTCCACGATTGGAGGAAGCTTGGTGATGACATAAAAGTAGTTTTGTGGAAATCAATTCAGGCAAGATTTGACTTGGAGGAGGAATGGCAGAAGGCTGTCGTATTTAAATCGATGGGATGTATATGGAGGGCCTCAAAGTCAAGATTAGTGAGCCAAATACAGGAGGCCAAAAACAAAGGAGAAAGACTTCGACTCCAACCTAAGAACATTCAAAGTAGAGCAGAGTGGAAAAGGTTCATCCGTGCAAAAACTAGTCCAGCATTTAAGGCTGTCAGTGATAAGTATAAGGCAATTAGGCACAAGCAAATCCCACACACATGTAGCCGAAAAGGAATGGCTCGATTGGCAGAAGATATGAAAAGGAACAGTGCCGACCCTTCTTCTGTATCTAGAGTTAAAGTTTGGATCAGATCACGTACCAGAAAGGATGGTAAACCAGTAAACACTGAAGTTTTTGAAACTATAGAGAGGGTGAATGTAGTTGAAAGTGATTTGCCATCATCCTCAACAACTAATGTGAGAGAAGATGCTTTATCTAAAGTCTTAGGACACGATAAACCTGGACGACTAAGAGGAATGGGAAGAGGAATGACCATCAGCAAATTGGCATTCTTTCAAACTAAGGACAAGCATGTGGCTAAGATGCAAGAGCAACAAATTAACATGCAAGACAGGATAAATCATTTGGAGAACTTGGTCAATAAATTAGTGAAAAATAAGATTCAACAAAGTGAGGAAGAGGAGAAAACATCTCCAATGAGCGTCAACACCAACTCATTGAATAAGTGCAAGCTACTAGATTGGAGTGGAACAGAGGACATTGTTGCTGAAGGTCGCTGGGTTTCAAGTGATCCAGAAGAGTCTGTCAATGAAATTCCCTTGGGACCTAATGCAATGAAAGTCTTGGTTGATATCTCAAATAAACCAGATGCTTTTCTTTGGAGGCCTACATCTAATATGTTTTGTTTTCAACATGCTCAAGGTAAAACAATAGCATGGCCTGCTGACAGAGTTATTTTTCAAATGGATCAGCAGTCTGAGGAACAAGACAATTTATCTATGCCTTCGAGTTCATACAACAACTCAAGGAACAAGTGCAAATTATTTGATTGGACTGGAAAAGATGAAGTAGTTGCAGAAGGACGTTGGCATTCAAGTGATCCAAAAGCGTTGGTAAATGGTATTCCTCTTGGACCTAATGCCATGATAGTTTGGGTAGATATTCCAAAGAATCATGAAGCATTTTTATGGAGGCCTACAATTGATATGACTTGCATTGAAGATGTCGTGAATTCTGCTATAGCATGGCCAGCTAACAAAGTTGTTTTGGAAAAGATATCAGAAAGTCAAGATGGTGAAAATGCATCCTCTCCTTCGAGTGTCAACTCCAAATCAAAGAAAAGGTGCAAGTTGTTGGATGTTAGTGGATCGGGACAAATAGTTGCTGAAGGACGTTGGTCCTCAAGTGATCCAGATCAGGTTGTTCATTTTGTTCCCTTGGGGCCTAATGCTATGAGAGTTTGGGTAGATACACCGAAAGTCCCAACTGCATCCCTTTGGAGGCCATCATCCGAGCTGGAAATTATTGAAGATGCTATTGGTACTACAATAGCATGGCCAGCAGACAAAGTGGTTTTCTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

683

Amino Acids

76.65

Weight (kDa)

8.9

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 212 - 333 1.5e-20 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 498 - 579 8.8e-06 Domain of unknown function (DUF8039)
DUF8039 PF26133 601 - 682 4.4e-08 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 6 cut(s) 821, 1253, 1443, 1562, 1843, 1871
AcoI YGGCCR 2 cut(s) 1715, 2024
AcsI RAATTY 4 cut(s) 306, 317, 1281, 1699
AcuI CTGAAG 3 cut(s) 876, 1257, 1875
AfaI GTAC 4 cut(s) 198, 387, 826, 2011
AfiI CCNNNNNNNGG 2 cut(s) 568, 1968
AflII CTTAAG 1 cut(s) 248
AflIII ACRYGT 2 cut(s) 394, 725
AhlI ACTAGT 1 cut(s) 659
AjnI CCWGG 2 cut(s) 295, 967
AjuI GAANNNNNNNTTGG 2 cut(s) 1989, 2021
AloI GAACNNNNNNTCC 2 cut(s) 147, 179
AluBI AGCT 5 cut(s) 230, 427, 1201, 1721, 1984
AluI AGCT 5 cut(s) 230, 427, 1201, 1721, 1984
AlwI GGATC 6 cut(s) 821, 1253, 1443, 1562, 1843, 1871
Ama87I CYCGRG 2 cut(s) 48, 238
ApeKI GCWGC 1 cut(s) 230
ApoI RAATTY 4 cut(s) 306, 317, 1281, 1699
Asp700I GAANNNNTTC 2 cut(s) 594, 641
AspS9I GGNCC 7 cut(s) 263, 377, 537, 1292, 1601, 1866, 1910
AsuHPI GGTGA 6 cut(s) 168, 344, 356, 443, 892, 1775
AvaI CYCGRG 2 cut(s) 48, 238
AvaII GGWCC 4 cut(s) 263, 1292, 1601, 1866
BalI TGGCCA 2 cut(s) 1717, 2026
BanII GRGCYC 1 cut(s) 353
BbsI GAAGAC 1 cut(s) 357
BbvI GCAGC 1 cut(s) 217
BccI CCATC 7 cut(s) 223, 514, 830, 913, 1010, 1754, 1981
BciT130I CCWGG 2 cut(s) 297, 969
BcuI ACTAGT 1 cut(s) 659
BfaI CTAG 5 cut(s) 6, 258, 660, 798, 1205
BfmI CTRYAG 3 cut(s) 231, 870, 1707
BfrI CTTAAG 1 cut(s) 248
BisI GCNGC 1 cut(s) 231
BlsI GCNGC 1 cut(s) 232
Bme1390I CCNGG 2 cut(s) 297, 969
Bme18I GGWCC 4 cut(s) 263, 1292, 1601, 1866
BmeT110I CYCGRG 2 cut(s) 48, 238
BmgT120I GGNCC 7 cut(s) 263, 377, 537, 1292, 1601, 1866, 1910
BmiI GGNNCC 3 cut(s) 294, 1293, 1911
BmrFI CCNGG 2 cut(s) 297, 969
BmsI GCATC 8 cut(s) 74, 196, 925, 1041, 1327, 1781, 1967, 1990
BoxI GACNNNNGTC 1 cut(s) 1864
BpiI GAAGAC 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 13, 45
BpuEI CTTGAG 3 cut(s) 1371, 1477, 1855
Bsa29I ATCGAT 1 cut(s) 518
BsaAI YACGTR 1 cut(s) 824
BsaBI GATNNNNATC 1 cut(s) 1881
BsaJI CCNNGG 2 cut(s) 1287, 1905
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 2 cut(s) 568, 1968
Bse1I ACTGG 2 cut(s) 845, 1528
Bse3DI GCAATG 1 cut(s) 1308
Bse8I GATNNNNATC 1 cut(s) 1881
BseBI CCWGG 2 cut(s) 297, 969
BseCI ATCGAT 1 cut(s) 518
BseDI CCNNGG 2 cut(s) 1287, 1905
BseGI GGATG 9 cut(s) 162, 530, 645, 841, 908, 1772, 1831, 1958, 1976
BseJI GATNNNNATC 1 cut(s) 1881
BseLI CCNNNNNNNGG 2 cut(s) 568, 1968
BseMI GCAATG 1 cut(s) 1308
BseMII CTCAG 2 cut(s) 366, 1437
BseNI ACTGG 2 cut(s) 845, 1528
BseRI GAGGAG 2 cut(s) 500, 1163
BseXI GCAGC 1 cut(s) 217
BseYI CCCAGC 1 cut(s) 1245
BshVI ATCGAT 1 cut(s) 518
BsiHKCI CYCGRG 2 cut(s) 48, 238
BslFI GGGAC 3 cut(s) 1305, 1854, 1934
BslI CCNNNNNNNGG 2 cut(s) 568, 1968
BsmFI GGGAC 3 cut(s) 1305, 1854, 1934
BsmI GAATGC 2 cut(s) 1016, 1558
BsoBI CYCGRG 2 cut(s) 48, 238
Bsp1286I GDGCHC 1 cut(s) 353
Bsp143I GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
BspCNI CTCAG 2 cut(s) 365, 1438
BspDI ATCGAT 1 cut(s) 518
BspHI TCATGA 1 cut(s) 1642
BspLI GGNNCC 3 cut(s) 294, 1293, 1911
BspMAI CTGCAG 1 cut(s) 235
BspPI GGATC 6 cut(s) 821, 1253, 1443, 1562, 1843, 1871
BspTI CTTAAG 1 cut(s) 248
BsrDI GCAATG 1 cut(s) 1308
BsrI ACTGG 2 cut(s) 845, 1528
BssECI CCNNGG 2 cut(s) 1287, 1905
BssMI GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
BssT1I CCWWGG 2 cut(s) 1287, 1905
Bst2UI CCWGG 2 cut(s) 297, 969
Bst4CI ACNGT 1 cut(s) 776
Bst6I CTCTTC 3 cut(s) 985, 1140, 1260
BstAFI CTTAAG 1 cut(s) 248
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstBAI YACGTR 1 cut(s) 824
BstC8I GCNNGC 4 cut(s) 1199, 1410, 1719, 2028
BstDEI CTNAG 7 cut(s) 352, 609, 952, 977, 1029, 1047, 1446
BstF5I GGATG 9 cut(s) 162, 530, 645, 841, 908, 1772, 1831, 1958, 1976
BstKTI GATC 8 cut(s) 816, 821, 1261, 1438, 1570, 1838, 1879, 1885
BstMBI GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
BstMWI GCNNNNNNNGC 8 cut(s) 11, 53, 62, 674, 752, 1409, 1718, 2027
BstNI CCWGG 2 cut(s) 297, 969
BstNSI RCATGY 6 cut(s) 47, 398, 729, 1043, 1075, 1385
BstPAI GACNNNNGTC 1 cut(s) 1864
BstSCI CCNGG 2 cut(s) 295, 967
BstSFI CTRYAG 3 cut(s) 231, 870, 1707
BstV1I GCAGC 1 cut(s) 217
BstV2I GAAGAC 1 cut(s) 357
Bsu15I ATCGAT 1 cut(s) 518
BsuTUI ATCGAT 1 cut(s) 518
BtgZI GCGATG 1 cut(s) 156
BtsCI GGATG 9 cut(s) 162, 530, 645, 841, 908, 1772, 1831, 1958, 1976
BtsIMutI CAGTG 3 cut(s) 688, 781, 852
Cac8I GCNNGC 4 cut(s) 1199, 1410, 1719, 2028
CciI TCATGA 1 cut(s) 1642
Cfr13I GGNCC 7 cut(s) 263, 377, 537, 1292, 1601, 1866, 1910
ClaI ATCGAT 1 cut(s) 518
CseI GACGC 1 cut(s) 1159
Csp6I GTAC 4 cut(s) 197, 386, 825, 2010
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviQI GTAC 4 cut(s) 197, 386, 825, 2010
DdeI CTNAG 7 cut(s) 352, 609, 952, 977, 1029, 1047, 1446
DpnI GATC 8 cut(s) 815, 820, 1260, 1437, 1569, 1837, 1878, 1884
DpnII GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
DraI TTTAAA 1 cut(s) 514
EaeI YGGCCR 2 cut(s) 1715, 2024
Eam1104I CTCTTC 3 cut(s) 985, 1140, 1260
EarI CTCTTC 3 cut(s) 985, 1140, 1260
Eco130I CCWWGG 2 cut(s) 1287, 1905
Eco147I AGGCCT 2 cut(s) 1354, 1663
Eco24I GRGCYC 1 cut(s) 353
Eco32I GATATC 2 cut(s) 1321, 1746
Eco47I GGWCC 4 cut(s) 263, 1292, 1601, 1866
Eco57I CTGAAG 3 cut(s) 876, 1257, 1875
Eco88I CYCGRG 2 cut(s) 48, 238
EcoO109I RGGNCCY 3 cut(s) 537, 1292, 1910
EcoRI GAATTC 2 cut(s) 306, 1699
EcoRII CCWGG 2 cut(s) 295, 967
EcoRV GATATC 2 cut(s) 1321, 1746
EcoT14I CCWWGG 2 cut(s) 1287, 1905
EcoT22I ATGCAT 1 cut(s) 1774
EcoT38I GRGCYC 1 cut(s) 353
ErhI CCWWGG 2 cut(s) 1287, 1905
FaqI GGGAC 3 cut(s) 1305, 1854, 1934
Fnu4HI GCNGC 1 cut(s) 231
FokI GGATG 9 cut(s) 149, 537, 632, 848, 895, 1759, 1838, 1945, 1963
FriOI GRGCYC 1 cut(s) 353
Fsp4HI GCNGC 1 cut(s) 231
FspBI CTAG 5 cut(s) 6, 258, 660, 798, 1205
GluI GCNGC 1 cut(s) 231
GsaI CCCAGC 1 cut(s) 1249
HgaI GACGC 1 cut(s) 1159
HincII GTYRAC 2 cut(s) 1174, 1792
HindII GTYRAC 2 cut(s) 1174, 1792
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 6 cut(s) 148, 224, 600, 1129, 1268, 1639
HphI GGTGA 6 cut(s) 168, 344, 356, 443, 892, 1775
Hpy166II GTNNAC 5 cut(s) 335, 842, 850, 1174, 1792
Hpy188I TCNGA 4 cut(s) 818, 1447, 1750, 1981
Hpy8I GTNNAC 5 cut(s) 335, 842, 850, 1174, 1792
HpyAV CCTTC 8 cut(s) 189, 493, 795, 1232, 1482, 1541, 1791, 1850
HpyCH4III ACNGT 1 cut(s) 776
HpyCH4IV ACGT 3 cut(s) 823, 1552, 1861
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 53, 62, 674, 752, 1409, 1718, 2027
HpyF3I CTNAG 7 cut(s) 352, 609, 952, 977, 1029, 1047, 1446
HpySE526I ACGT 3 cut(s) 823, 1552, 1861
Kzo9I GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
LmnI GCTCC 1 cut(s) 292
Lsp1109I GCAGC 1 cut(s) 217
LweI GCATC 8 cut(s) 74, 196, 925, 1041, 1327, 1781, 1967, 1990
MaeI CTAG 5 cut(s) 6, 258, 660, 798, 1205
MaeII ACGT 3 cut(s) 823, 1552, 1861
MaeIII GTNAC 1 cut(s) 403
MalI GATC 8 cut(s) 815, 820, 1260, 1437, 1569, 1837, 1878, 1884
MboI GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
MfeI CAATTG 1 cut(s) 1668
MhlI GDGCHC 1 cut(s) 353
MlsI TGGCCA 2 cut(s) 1717, 2026
MluNI TGGCCA 2 cut(s) 1717, 2026
MlyI GAGTC 3 cut(s) 157, 594, 1277
MmeI TCCRAC 4 cut(s) 190, 290, 628, 1803
Mox20I TGGCCA 2 cut(s) 1717, 2026
Mph1103I ATGCAT 1 cut(s) 1774
MroXI GAANNNNTTC 2 cut(s) 594, 641
MscI TGGCCA 2 cut(s) 1717, 2026
MseI TTAA 6 cut(s) 131, 249, 513, 672, 804, 1068
MslI CAYNNNNRTG 3 cut(s) 724, 1563, 1654
Msp20I TGGCCA 2 cut(s) 1717, 2026
MspA1I CMGCKG 1 cut(s) 230
MspCI CTTAAG 1 cut(s) 248
MspR9I CCNGG 2 cut(s) 297, 969
MunI CAATTG 1 cut(s) 1668
Mva1269I GAATGC 2 cut(s) 1016, 1558
MvaI CCWGG 2 cut(s) 297, 969
MwoI GCNNNNNNNGC 8 cut(s) 11, 53, 62, 674, 752, 1409, 1718, 2027
NdeII GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
NlaIV GGNNCC 3 cut(s) 294, 1293, 1911
NsiI ATGCAT 1 cut(s) 1774
NspI RCATGY 6 cut(s) 47, 398, 729, 1043, 1075, 1385
PagI TCATGA 1 cut(s) 1642
PceI AGGCCT 2 cut(s) 1354, 1663
PciI ACATGT 2 cut(s) 394, 725
PctI GAATGC 2 cut(s) 1016, 1558
PdmI GAANNNNTTC 2 cut(s) 594, 641
PfeI GAWTC 3 cut(s) 224, 1129, 1639
PkrI GCNGC 1 cut(s) 232
PleI GAGTC 3 cut(s) 156, 594, 1276
PpsI GAGTC 3 cut(s) 156, 594, 1276
Ppu21I YACGTR 1 cut(s) 824
PpuMI RGGWCCY 1 cut(s) 1292
PscI ACATGT 2 cut(s) 394, 725
PshAI GACNNNNGTC 1 cut(s) 1864
Psp5II RGGWCCY 1 cut(s) 1292
Psp6I CCWGG 2 cut(s) 295, 967
PspFI CCCAGC 1 cut(s) 1245
PspGI CCWGG 2 cut(s) 295, 967
PspN4I GGNNCC 3 cut(s) 294, 1293, 1911
PspPI GGNCC 7 cut(s) 263, 377, 537, 1292, 1601, 1866, 1910
PspPPI RGGWCCY 1 cut(s) 1292
PstI CTGCAG 1 cut(s) 235
PvuII CAGCTG 1 cut(s) 230
RsaI GTAC 4 cut(s) 198, 387, 826, 2011
RsaNI GTAC 4 cut(s) 197, 386, 825, 2010
RseI CAYNNNNRTG 3 cut(s) 724, 1563, 1654
SaqAI TTAA 6 cut(s) 131, 249, 513, 672, 804, 1068
SatI GCNGC 1 cut(s) 231
Sau3AI GATC 8 cut(s) 813, 818, 1258, 1435, 1567, 1835, 1876, 1882
Sau96I GGNCC 7 cut(s) 263, 377, 537, 1292, 1601, 1866, 1910
SchI GAGTC 3 cut(s) 157, 594, 1277
ScrFI CCNGG 2 cut(s) 297, 969
SduI GDGCHC 1 cut(s) 353
SfaNI GCATC 8 cut(s) 74, 196, 925, 1041, 1327, 1781, 1967, 1990
SfcI CTRYAG 3 cut(s) 231, 870, 1707
SinI GGWCC 4 cut(s) 263, 1292, 1601, 1866
SmiI ATTTAAAT 1 cut(s) 514
SmiMI CAYNNNNRTG 3 cut(s) 724, 1563, 1654
SmlI CTYRAG 4 cut(s) 248, 1386, 1492, 1870
SmoI CTYRAG 4 cut(s) 248, 1386, 1492, 1870
SpeI ACTAGT 1 cut(s) 659
SseBI AGGCCT 2 cut(s) 1354, 1663
SspMI CTAG 5 cut(s) 6, 258, 660, 798, 1205
StuI AGGCCT 2 cut(s) 1354, 1663
StyD4I CCNGG 2 cut(s) 295, 967
StyI CCWWGG 2 cut(s) 1287, 1905
SwaI ATTTAAAT 1 cut(s) 514
TaaI ACNGT 1 cut(s) 776
TaiI ACGT 3 cut(s) 826, 1555, 1864
TaqI TCGA 6 cut(s) 304, 518, 598, 748, 1475, 1784
TfiI GAWTC 3 cut(s) 224, 1129, 1639
Tru1I TTAA 6 cut(s) 131, 249, 513, 672, 804, 1068
Tru9I TTAA 6 cut(s) 131, 249, 513, 672, 804, 1068
TscAI CASTG 3 cut(s) 688, 781, 859
TseI GCWGC 1 cut(s) 230
TspGWI ACGGA 1 cut(s) 638
TspRI CASTG 3 cut(s) 688, 781, 859
Vha464I CTTAAG 1 cut(s) 248
VpaK11BI GGWCC 4 cut(s) 263, 1292, 1601, 1866
XapI RAATTY 4 cut(s) 306, 317, 1281, 1699
XbaI TCTAGA 1 cut(s) 797
XceI RCATGY 6 cut(s) 47, 398, 729, 1043, 1075, 1385
XcmI CCANNNNNNNNNTGG 2 cut(s) 190, 1009
XmnI GAANNNNTTC 2 cut(s) 594, 641
XspI CTAG 5 cut(s) 6, 258, 660, 798, 1205
Zsp2I ATGCAT 1 cut(s) 1774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.