isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 371 |
| AcoI | YGGCCR | 2 cut(s) | 150, 524 |
| AcsI | RAATTY | 1 cut(s) | 68 |
| AflII | CTTAAG | 1 cut(s) | 283 |
| AgsI | TTSAA | 4 cut(s) | 64, 189, 372, 497 |
| AjnI | CCWGG | 1 cut(s) | 379 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 489, 521 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 284, 316 |
| AluBI | AGCT | 5 cut(s) | 232, 282, 388, 484, 521 |
| AluI | AGCT | 5 cut(s) | 232, 282, 388, 484, 521 |
| Alw21I | GWGCWC | 1 cut(s) | 228 |
| AlwI | GGATC | 1 cut(s) | 371 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 124 |
| AoxI | GGCC | 4 cut(s) | 132, 150, 470, 524 |
| ApaI | GGGCCC | 1 cut(s) | 136 |
| ApoI | RAATTY | 1 cut(s) | 68 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 4 cut(s) | 132, 133, 410, 448 |
| AvaII | GGWCC | 2 cut(s) | 410, 448 |
| BaeGI | GKGCMC | 1 cut(s) | 136 |
| BalI | TGGCCA | 2 cut(s) | 152, 526 |
| BanII | GRGCYC | 1 cut(s) | 136 |
| BbsI | GAAGAC | 1 cut(s) | 360 |
| Bbv12I | GWGCWC | 1 cut(s) | 228 |
| BccI | CCATC | 2 cut(s) | 182, 535 |
| BciT130I | CCWGG | 1 cut(s) | 381 |
| BfaI | CTAG | 3 cut(s) | 20, 210, 233 |
| BfrI | CTTAAG | 1 cut(s) | 283 |
| Bme1390I | CCNGG | 1 cut(s) | 381 |
| Bme18I | GGWCC | 2 cut(s) | 410, 448 |
| BmgT120I | GGNCC | 4 cut(s) | 132, 133, 410, 448 |
| BmiI | GGNNCC | 3 cut(s) | 134, 449, 450 |
| BmrFI | CCNGG | 1 cut(s) | 381 |
| BmsI | GCATC | 3 cut(s) | 132, 467, 490 |
| BoxI | GACNNNNGTC | 1 cut(s) | 364 |
| BpiI | GAAGAC | 1 cut(s) | 360 |
| BpmI | CTGGAG | 1 cut(s) | 212 |
| BsaJI | CCNNGG | 1 cut(s) | 443 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 284, 314 |
| Bse1I | ACTGG | 1 cut(s) | 58 |
| BseBI | CCWGG | 1 cut(s) | 381 |
| BseDI | CCNNGG | 1 cut(s) | 443 |
| BseMII | CTCAG | 1 cut(s) | 471 |
| BseNI | ACTGG | 1 cut(s) | 58 |
| BseSI | GKGCMC | 1 cut(s) | 136 |
| BshFI | GGCC | 4 cut(s) | 134, 152, 472, 526 |
| BsiHKAI | GWGCWC | 1 cut(s) | 228 |
| BslFI | GGGAC | 3 cut(s) | 227, 434, 523 |
| BsmFI | GGGAC | 3 cut(s) | 227, 434, 523 |
| BsnI | GGCC | 4 cut(s) | 134, 152, 472, 526 |
| Bsp120I | GGGCCC | 1 cut(s) | 132 |
| Bsp1286I | GDGCHC | 2 cut(s) | 136, 228 |
| Bsp143I | GATC | 1 cut(s) | 376 |
| BspANI | GGCC | 4 cut(s) | 134, 152, 472, 526 |
| BspCNI | CTCAG | 1 cut(s) | 472 |
| BspLI | GGNNCC | 3 cut(s) | 134, 449, 450 |
| BspPI | GGATC | 1 cut(s) | 371 |
| BspQI | GCTCTTC | 1 cut(s) | 231 |
| BspTI | CTTAAG | 1 cut(s) | 283 |
| BsrI | ACTGG | 1 cut(s) | 58 |
| BssECI | CCNNGG | 1 cut(s) | 443 |
| BssMI | GATC | 1 cut(s) | 376 |
| BssT1I | CCWWGG | 1 cut(s) | 443 |
| Bst2UI | CCWGG | 1 cut(s) | 381 |
| Bst6I | CTCTTC | 1 cut(s) | 231 |
| BstAFI | CTTAAG | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 2 cut(s) | 12, 386 |
| BstDEI | CTNAG | 1 cut(s) | 480 |
| BstKTI | GATC | 1 cut(s) | 379 |
| BstMBI | GATC | 1 cut(s) | 376 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 238 |
| BstNI | CCWGG | 1 cut(s) | 381 |
| BstNSI | RCATGY | 1 cut(s) | 224 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 364 |
| BstSCI | CCNGG | 1 cut(s) | 379 |
| BstSLI | GKGCMC | 1 cut(s) | 136 |
| BstV2I | GAAGAC | 1 cut(s) | 360 |
| BsuRI | GGCC | 4 cut(s) | 134, 152, 472, 526 |
| BtsI | GCAGTG | 1 cut(s) | 201 |
| BtsIMutI | CAGTG | 2 cut(s) | 201, 246 |
| Cac8I | GCNNGC | 2 cut(s) | 12, 386 |
| CaiI | CAGNNNCTG | 1 cut(s) | 124 |
| Cfr13I | GGNCC | 4 cut(s) | 132, 133, 410, 448 |
| CseI | GACGC | 1 cut(s) | 195 |
| CviAII | CATG | 1 cut(s) | 221 |
| DdeI | CTNAG | 1 cut(s) | 480 |
| DpnI | GATC | 1 cut(s) | 378 |
| DpnII | GATC | 1 cut(s) | 376 |
| EaeI | YGGCCR | 2 cut(s) | 150, 524 |
| Eam1104I | CTCTTC | 1 cut(s) | 231 |
| EarI | CTCTTC | 1 cut(s) | 231 |
| Eco130I | CCWWGG | 1 cut(s) | 443 |
| Eco24I | GRGCYC | 1 cut(s) | 136 |
| Eco32I | GATATC | 1 cut(s) | 439 |
| Eco47I | GGWCC | 2 cut(s) | 410, 448 |
| EcoO109I | RGGNCCY | 2 cut(s) | 410, 448 |
| EcoRII | CCWGG | 1 cut(s) | 379 |
| EcoRV | GATATC | 1 cut(s) | 439 |
| EcoT14I | CCWWGG | 1 cut(s) | 443 |
| EcoT22I | ATGCAT | 1 cut(s) | 147 |
| EcoT38I | GRGCYC | 1 cut(s) | 136 |
| ErhI | CCWWGG | 1 cut(s) | 443 |
| FaeI | CATG | 1 cut(s) | 224 |
| FaiI | YATR | 9 cut(s) | 81, 83, 166, 183, 194, 222, 254, 422, 545 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 56, 88, 302, 334 |
| FaqI | GGGAC | 3 cut(s) | 227, 434, 523 |
| FatI | CATG | 1 cut(s) | 220 |
| FauNDI | CATATG | 1 cut(s) | 81 |
| FriOI | GRGCYC | 1 cut(s) | 136 |
| FspBI | CTAG | 3 cut(s) | 20, 210, 233 |
| GsuI | CTGGAG | 1 cut(s) | 212 |
| HaeIII | GGCC | 4 cut(s) | 134, 152, 472, 526 |
| HgaI | GACGC | 1 cut(s) | 195 |
| Hin1II | CATG | 1 cut(s) | 224 |
| HinfI | GANTC | 1 cut(s) | 264 |
| Hpy166II | GTNNAC | 1 cut(s) | 292 |
| Hpy188I | TCNGA | 3 cut(s) | 126, 481, 532 |
| Hpy188III | TCNNGA | 1 cut(s) | 339 |
| Hpy8I | GTNNAC | 1 cut(s) | 292 |
| HpyAV | CCTTC | 1 cut(s) | 350 |
| HpyCH4V | TGCA | 5 cut(s) | 14, 145, 315, 353, 458 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 238 |
| HpyF3I | CTNAG | 1 cut(s) | 480 |
| Hsp92II | CATG | 1 cut(s) | 224 |
| KflI | GGGWCCC | 1 cut(s) | 448 |
| Kzo9I | GATC | 1 cut(s) | 376 |
| LguI | GCTCTTC | 1 cut(s) | 231 |
| LmnI | GCTCC | 1 cut(s) | 231 |
| LpnPI | CCDG | 8 cut(s) | 24, 62, 71, 104, 113, 242, 366, 393 |
| LweI | GCATC | 3 cut(s) | 132, 467, 490 |
| MaeI | CTAG | 3 cut(s) | 20, 210, 233 |
| MalI | GATC | 1 cut(s) | 378 |
| MboI | GATC | 1 cut(s) | 376 |
| MboII | GAAGA | 5 cut(s) | 76, 153, 248, 360, 509 |
| MhlI | GDGCHC | 2 cut(s) | 136, 228 |
| MlsI | TGGCCA | 2 cut(s) | 152, 526 |
| MluCI | AATT | 3 cut(s) | 27, 68, 189 |
| MluNI | TGGCCA | 2 cut(s) | 152, 526 |
| MnlI | CCTC | 4 cut(s) | 16, 96, 104, 462 |
| Mox20I | TGGCCA | 2 cut(s) | 152, 526 |
| Mph1103I | ATGCAT | 1 cut(s) | 147 |
| MroXI | GAANNNNTTC | 1 cut(s) | 68 |
| MscI | TGGCCA | 2 cut(s) | 152, 526 |
| MseI | TTAA | 4 cut(s) | 74, 113, 170, 284 |
| MslI | CAYNNNNRTG | 1 cut(s) | 251 |
| Msp20I | TGGCCA | 2 cut(s) | 152, 526 |
| MspCI | CTTAAG | 1 cut(s) | 283 |
| MspR9I | CCNGG | 1 cut(s) | 381 |
| MvaI | CCWGG | 1 cut(s) | 381 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 238 |
| NdeI | CATATG | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 376 |
| NlaIII | CATG | 1 cut(s) | 224 |
| NlaIV | GGNNCC | 3 cut(s) | 134, 449, 450 |
| NsiI | ATGCAT | 1 cut(s) | 147 |
| NspI | RCATGY | 1 cut(s) | 224 |
| PciSI | GCTCTTC | 1 cut(s) | 231 |
| PdmI | GAANNNNTTC | 1 cut(s) | 68 |
| PfeI | GAWTC | 1 cut(s) | 264 |
| PpuMI | RGGWCCY | 2 cut(s) | 410, 448 |
| PshAI | GACNNNNGTC | 1 cut(s) | 364 |
| Psp5II | RGGWCCY | 2 cut(s) | 410, 448 |
| Psp6I | CCWGG | 1 cut(s) | 379 |
| PspGI | CCWGG | 1 cut(s) | 379 |
| PspN4I | GGNNCC | 3 cut(s) | 134, 449, 450 |
| PspOMI | GGGCCC | 1 cut(s) | 132 |
| PspPI | GGNCC | 4 cut(s) | 132, 133, 410, 448 |
| PspPPI | RGGWCCY | 2 cut(s) | 410, 448 |
| PstNI | CAGNNNCTG | 1 cut(s) | 124 |
| RseI | CAYNNNNRTG | 1 cut(s) | 251 |
| SapI | GCTCTTC | 1 cut(s) | 231 |
| SaqAI | TTAA | 4 cut(s) | 74, 113, 170, 284 |
| Sau3AI | GATC | 1 cut(s) | 376 |
| Sau96I | GGNCC | 4 cut(s) | 132, 133, 410, 448 |
| ScrFI | CCNGG | 1 cut(s) | 381 |
| SduI | GDGCHC | 2 cut(s) | 136, 228 |
| SetI | ASST | 6 cut(s) | 234, 284, 390, 412, 486, 523 |
| SfaNI | GCATC | 3 cut(s) | 132, 467, 490 |
| SinI | GGWCC | 2 cut(s) | 410, 448 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 251 |
| SmlI | CTYRAG | 1 cut(s) | 283 |
| SmoI | CTYRAG | 1 cut(s) | 283 |
| Sse9I | AATT | 3 cut(s) | 27, 68, 189 |
| SspMI | CTAG | 3 cut(s) | 20, 210, 233 |
| StyD4I | CCNGG | 1 cut(s) | 379 |
| StyI | CCWWGG | 1 cut(s) | 443 |
| TasI | AATT | 3 cut(s) | 27, 68, 189 |
| TfiI | GAWTC | 1 cut(s) | 264 |
| Tru1I | TTAA | 4 cut(s) | 74, 113, 170, 284 |
| Tru9I | TTAA | 4 cut(s) | 74, 113, 170, 284 |
| TscAI | CASTG | 2 cut(s) | 208, 253 |
| TspDTI | ATGAA | 2 cut(s) | 153, 383 |
| TspRI | CASTG | 2 cut(s) | 208, 253 |
| Vha464I | CTTAAG | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 2 cut(s) | 410, 448 |
| XapI | RAATTY | 1 cut(s) | 68 |
| XceI | RCATGY | 1 cut(s) | 224 |
| XmnI | GAANNNNTTC | 1 cut(s) | 68 |
| XspI | CTAG | 3 cut(s) | 20, 210, 233 |
| Zsp2I | ATGCAT | 1 cut(s) | 147 |