Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000089

Physical Location & Seq

Genomic Coordinates Forward (+)

25302557 .. 25305623

Gene Structure 3067 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0183500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 804 bp

ATGTCGGAGCAGAGATCCGGGTTAAGAATCCGAGACGCCAGCCCGGACTCGGTTATTTACACACTCGAGTCCAGCCTCTTCTCCTCTTCCGCTTCCGCCAGCGTTGACCGCTGCTCCTTCACCTCCGAAGCCTTTGACCACGACTCCACCGCCTCCGAGATCTCTCCGAACTCGGCGGCGCACCGTCACCAGGTTGAAGAGAGCTCCAGTGGTCCGGATCGCGATCCAGATCCGAAGACGAGCCCCGCTTTACACATCACCAGCCACCACCACGGTCGTCGATCCGAAAAAGGAGAAAAGGCCAAAGTTCCAAAGCAAGACAGCGACGCCGACTTGGTTCTTGATTCAGCACGAAGCTCTTTCTCTCTCGCCTTAAAAGAATGCCAGGACCGTCGATCTAGATCTGAAGCTCTGTCCAAGAAGCTAGACAGGCCGAGACCCGCTTCTTTGGATTTGAACAATGTCACCGCCTCGTCTCCGAGATTGGGGACCTTAAAGAAGAGCTCAACGGCGTCTCGCAAGTCTGGAACCTTCCCAAGTCCCGGAACACCTACCTATCGGCATACTAGTCTTGGAGTGCAGAAGGGTTGGAGCTCGGAGCGAGTTCCGGCCAATGCTAATTTAGGGGGCAGGAAGAATACAACTGCTGCTGCTATGTTGCCATTCAACAATGGGAGGACGTTGCCGTCGAAATGGGAAGATGCAGAGAGGTGGATTTTCAGTCCGGTTCAGGGGGATGGTGTGACGAGGCAGTCGAACAGCAATTATATCGAATTGCGCTGCGCTCCGGTGCTTGCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005975 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006884 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0008361 GO:0009311 GO:0009505 GO:0009605 GO:0009607 GO:0009615 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009751 GO:0009826 GO:0009987 GO:0009992 GO:0010033 GO:0014070 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0023052 GO:0030104 GO:0030312 GO:0032502 GO:0032535 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055082 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0090066 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

267

Amino Acids

29.02

Weight (kDa)

9.45

Isoelectric Point (pI)

71.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42700
fragaria_vesca	FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica	MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis	pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis	RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata	RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora	Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii	Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa	Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha	Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana	Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	685, 751
AccII	CGCG	1 cut(s)	222
AccIII	TCCGGA	1 cut(s)	214
AciI	CCGC	8 cut(s)	90, 96, 109, 150, 176, 246, 441, 468
AclWI	GGATC	5 cut(s)	9, 218, 224, 225, 276
AcoI	YGGCCR	1 cut(s)	609
AcuI	CTGAAG	1 cut(s)	426
AcyI	GRCGYC	3 cut(s)	36, 327, 512
AfiI	CCNNNNNNNGG	5 cut(s)	49, 190, 485, 542, 731
AgsI	TTSAA	3 cut(s)	197, 457, 667
AhlI	ACTAGT	1 cut(s)	566
AjnI	CCWGG	2 cut(s)	189, 384
AluBI	AGCT	6 cut(s)	204, 357, 410, 424, 504, 594
AluI	AGCT	6 cut(s)	204, 357, 410, 424, 504, 594
Alw21I	GWGCWC	3 cut(s)	206, 506, 596
Alw26I	GTCTC	4 cut(s)	27, 430, 480, 519
AlwI	GGATC	5 cut(s)	9, 218, 224, 225, 276
Ama87I	CYCGRG	1 cut(s)	65
Aor13HI	TCCGGA	1 cut(s)	214
AoxI	GGCC	3 cut(s)	300, 431, 609
ApeKI	GCWGC	4 cut(s)	111, 647, 650, 780
AspLEI	GCGC	3 cut(s)	181, 780, 785
AspS9I	GGNCC	3 cut(s)	212, 388, 489
AsuC2I	CCSGG	3 cut(s)	19, 44, 543
AsuHPI	GGTGA	4 cut(s)	112, 179, 250, 457
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	3 cut(s)	212, 388, 489
BanII	GRGCYC	4 cut(s)	206, 245, 506, 596
BbsI	GAAGAC	1 cut(s)	242
Bbv12I	GWGCWC	3 cut(s)	206, 506, 596
BbvI	GCAGC	4 cut(s)	98, 634, 637, 767
BccI	CCATC	1 cut(s)	731
BceAI	ACGGC	2 cut(s)	525, 670
BcgI	CGANNNNNNTGC	2 cut(s)	751, 785
BciT130I	CCWGG	2 cut(s)	191, 386
BcnI	CCSGG	3 cut(s)	19, 44, 543
BcoDI	GTCTC	4 cut(s)	27, 430, 480, 519
BcuI	ACTAGT	1 cut(s)	566
BfaI	CTAG	3 cut(s)	399, 425, 567
BglII	AGATCT	2 cut(s)	159, 401
BisI	GCNGC	5 cut(s)	112, 177, 648, 651, 781
BlsI	GCNGC	5 cut(s)	113, 178, 649, 652, 782
Bme1390I	CCNGG	5 cut(s)	19, 44, 191, 386, 543
Bme18I	GGWCC	3 cut(s)	212, 388, 489
BmeT110I	CYCGRG	1 cut(s)	65
BmgT120I	GGNCC	3 cut(s)	212, 388, 489
BmiI	GGNNCC	2 cut(s)	490, 529
BmrFI	CCNGG	5 cut(s)	19, 44, 191, 386, 543
BmsI	GCATC	1 cut(s)	691
BpiI	GAAGAC	1 cut(s)	242
BpmI	CTGGAG	1 cut(s)	190
BpuMI	CCSGG	3 cut(s)	19, 44, 543
BsaBI	GATNNNNATC	3 cut(s)	222, 228, 400
BsaHI	GRCGYC	3 cut(s)	36, 327, 512
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	1 cut(s)	271
BsaWI	WCCGGW	3 cut(s)	214, 724, 787
BsaXI	ACNNNNNCTCC	4 cut(s)	98, 128, 128, 158
Bsc4I	CCNNNNNNNGG	5 cut(s)	49, 190, 485, 542, 731
Bse1I	ACTGG	1 cut(s)	207
Bse8I	GATNNNNATC	3 cut(s)	222, 228, 400
BseAI	TCCGGA	1 cut(s)	214
BseBI	CCWGG	2 cut(s)	191, 386
BseDI	CCNNGG	1 cut(s)	271
BseGI	GGATG	1 cut(s)	742
BseJI	GATNNNNATC	3 cut(s)	222, 228, 400
BseLI	CCNNNNNNNGG	5 cut(s)	49, 190, 485, 542, 731
BseNI	ACTGG	1 cut(s)	207
BseRI	GAGGAG	1 cut(s)	73
BseXI	GCAGC	4 cut(s)	98, 634, 637, 767
BsgI	GTGCAG	1 cut(s)	599
Bsh1236I	CGCG	1 cut(s)	222
Bsh1285I	CGRYCG	1 cut(s)	277
BshFI	GGCC	3 cut(s)	302, 433, 611
BsiEI	CGRYCG	1 cut(s)	277
BsiHKAI	GWGCWC	3 cut(s)	206, 506, 596
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	7 cut(s)	18, 44, 215, 543, 608, 725, 788
BslFI	GGGAC	2 cut(s)	502, 525
BslI	CCNNNNNNNGG	5 cut(s)	49, 190, 485, 542, 731
BsmAI	GTCTC	4 cut(s)	27, 430, 480, 519
BsmBI	CGTCTC	3 cut(s)	27, 480, 519
BsmFI	GGGAC	2 cut(s)	502, 525
BsmI	GAATGC	1 cut(s)	386
BsnI	GGCC	3 cut(s)	302, 433, 611
Bso31I	GGTCTC	1 cut(s)	430
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	4 cut(s)	206, 245, 506, 596
Bsp13I	TCCGGA	1 cut(s)	214
Bsp143I	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
Bsp68I	TCGCGA	1 cut(s)	222
BspACI	CCGC	8 cut(s)	90, 96, 109, 150, 176, 246, 441, 468
BspANI	GGCC	3 cut(s)	302, 433, 611
BspEI	TCCGGA	1 cut(s)	214
BspFNI	CGCG	1 cut(s)	222
BspLI	GGNNCC	2 cut(s)	490, 529
BspPI	GGATC	5 cut(s)	9, 218, 224, 225, 276
BspQI	GCTCTTC	1 cut(s)	494
BspTNI	GGTCTC	1 cut(s)	430
BsrI	ACTGG	1 cut(s)	207
BssECI	CCNNGG	1 cut(s)	271
BssMI	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
BssNI	GRCGYC	3 cut(s)	36, 327, 512
Bst2UI	CCWGG	2 cut(s)	191, 386
Bst4CI	ACNGT	3 cut(s)	185, 275, 392
Bst6I	CTCTTC	4 cut(s)	83, 91, 192, 494
BstACI	GRCGYC	3 cut(s)	36, 327, 512
BstC8I	GCNNGC	3 cut(s)	40, 100, 795
BstDSI	CCRYGG	1 cut(s)	271
BstF5I	GGATG	1 cut(s)	742
BstFNI	CGCG	1 cut(s)	222
BstHHI	GCGC	3 cut(s)	181, 780, 785
BstKTI	GATC	8 cut(s)	17, 162, 220, 226, 232, 284, 398, 404
BstMAI	GTCTC	4 cut(s)	27, 430, 480, 519
BstMBI	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
BstMCI	CGRYCG	1 cut(s)	277
BstMWI	GCNNNNNNNGC	2 cut(s)	108, 430
BstNI	CCWGG	2 cut(s)	191, 386
BstSCI	CCNGG	5 cut(s)	17, 42, 189, 384, 541
BstUI	CGCG	1 cut(s)	222
BstV1I	GCAGC	4 cut(s)	98, 634, 637, 767
BstV2I	GAAGAC	1 cut(s)	242
BstX2I	RGATCY	4 cut(s)	14, 159, 229, 401
BstYI	RGATCY	4 cut(s)	14, 159, 229, 401
BsuRI	GGCC	3 cut(s)	302, 433, 611
BtgI	CCRYGG	1 cut(s)	271
BtsCI	GGATG	1 cut(s)	742
BtsIMutI	CAGTG	1 cut(s)	214
BtuMI	TCGCGA	1 cut(s)	222
Cac8I	GCNNGC	3 cut(s)	40, 100, 795
CfoI	GCGC	3 cut(s)	181, 780, 785
Cfr13I	GGNCC	3 cut(s)	212, 388, 489
CseI	GACGC	3 cut(s)	44, 335, 501
CsiI	ACCWGGT	1 cut(s)	189
DpnI	GATC	8 cut(s)	16, 161, 219, 225, 231, 283, 397, 403
DpnII	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
DrdI	GACNNNNNNGTC	2 cut(s)	685, 751
DseDI	GACNNNNNNGTC	2 cut(s)	685, 751
EaeI	YGGCCR	1 cut(s)	609
Eam1104I	CTCTTC	4 cut(s)	83, 91, 192, 494
EarI	CTCTTC	4 cut(s)	83, 91, 192, 494
EciI	GGCGGA	1 cut(s)	85
Ecl136II	GAGCTC	3 cut(s)	204, 504, 594
Eco24I	GRGCYC	4 cut(s)	206, 245, 506, 596
Eco31I	GGTCTC	1 cut(s)	430
Eco47I	GGWCC	3 cut(s)	212, 388, 489
Eco53kI	GAGCTC	3 cut(s)	204, 504, 594
Eco57I	CTGAAG	1 cut(s)	426
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	3 cut(s)	204, 504, 594
EcoO109I	RGGNCCY	1 cut(s)	489
EcoRII	CCWGG	2 cut(s)	189, 384
EcoT38I	GRGCYC	4 cut(s)	206, 245, 506, 596
Esp3I	CGTCTC	3 cut(s)	27, 480, 519
FaiI	YATR	3 cut(s)	564, 656, 768
FaqI	GGGAC	2 cut(s)	502, 525
FauI	CCCGC	2 cut(s)	253, 448
Fnu4HI	GCNGC	5 cut(s)	112, 177, 648, 651, 781
FokI	GGATG	1 cut(s)	749
FriOI	GRGCYC	4 cut(s)	206, 245, 506, 596
Fsp4HI	GCNGC	5 cut(s)	112, 177, 648, 651, 781
FspBI	CTAG	3 cut(s)	399, 425, 567
GlaI	GCGC	3 cut(s)	180, 779, 784
GluI	GCNGC	5 cut(s)	112, 177, 648, 651, 781
GsuI	CTGGAG	1 cut(s)	190
HaeIII	GGCC	3 cut(s)	302, 433, 611
HapII	CCGG	7 cut(s)	18, 44, 215, 543, 608, 725, 788
HgaI	GACGC	3 cut(s)	44, 335, 501
HhaI	GCGC	3 cut(s)	181, 780, 785
Hin1I	GRCGYC	3 cut(s)	36, 327, 512
Hin6I	GCGC	3 cut(s)	179, 778, 783
HinP1I	GCGC	3 cut(s)	179, 778, 783
HincII	GTYRAC	1 cut(s)	106
HindII	GTYRAC	1 cut(s)	106
HinfI	GANTC	5 cut(s)	27, 47, 68, 143, 344
HpaII	CCGG	7 cut(s)	18, 44, 215, 543, 608, 725, 788
HphI	GGTGA	4 cut(s)	112, 179, 250, 457
Hpy166II	GTNNAC	1 cut(s)	106
Hpy188III	TCNNGA	6 cut(s)	215, 221, 227, 341, 399, 525
Hpy8I	GTNNAC	1 cut(s)	106
Hpy99I	CGWCG	4 cut(s)	282, 329, 396, 691
HpyAV	CCTTC	3 cut(s)	127, 541, 577
HpyCH4III	ACNGT	3 cut(s)	185, 275, 392
HpyCH4IV	ACGT	1 cut(s)	680
HpyCH4V	TGCA	2 cut(s)	580, 704
HpyF10VI	GCNNNNNNNGC	2 cut(s)	108, 430
HpySE526I	ACGT	1 cut(s)	680
Hsp92I	GRCGYC	3 cut(s)	36, 327, 512
HspAI	GCGC	3 cut(s)	179, 778, 783
Kpn2I	TCCGGA	1 cut(s)	214
Kzo9I	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
LguI	GCTCTTC	1 cut(s)	494
LmnI	GCTCC	6 cut(s)	7, 119, 209, 591, 598, 790
Lsp1109I	GCAGC	4 cut(s)	98, 634, 637, 767
LweI	GCATC	1 cut(s)	691
MabI	ACCWGGT	1 cut(s)	189
MaeI	CTAG	3 cut(s)	399, 425, 567
MaeII	ACGT	1 cut(s)	680
MaeIII	GTNAC	3 cut(s)	185, 463, 742
MalI	GATC	8 cut(s)	16, 161, 219, 225, 231, 283, 397, 403
MboI	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
MboII	GAAGA	7 cut(s)	70, 78, 209, 247, 511, 646, 710
MflI	RGATCY	4 cut(s)	14, 159, 229, 401
MhlI	GDGCHC	4 cut(s)	206, 245, 506, 596
MluCI	AATT	3 cut(s)	619, 763, 773
MlyI	GAGTC	3 cut(s)	41, 77, 137
MmeI	TCCRAC	1 cut(s)	569
MnlI	CCTC	8 cut(s)	86, 94, 133, 163, 481, 669, 702, 741
MroI	TCCGGA	1 cut(s)	214
MseI	TTAA	3 cut(s)	23, 374, 494
MspA1I	CMGCKG	1 cut(s)	111
MspI	CCGG	7 cut(s)	18, 44, 215, 543, 608, 725, 788
MspR9I	CCNGG	5 cut(s)	19, 44, 191, 386, 543
MteI	GCGCNGCGC	1 cut(s)	781
Mva1269I	GAATGC	1 cut(s)	386
MvaI	CCWGG	2 cut(s)	191, 386
MvnI	CGCG	1 cut(s)	222
MwoI	GCNNNNNNNGC	2 cut(s)	108, 430
NciI	CCSGG	3 cut(s)	19, 44, 543
NdeII	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
NlaIV	GGNNCC	2 cut(s)	490, 529
NmeAIII	GCCGAG	2 cut(s)	152, 459
NmuCI	GTSAC	3 cut(s)	185, 463, 742
NruI	TCGCGA	1 cut(s)	222
PaeR7I	CTCGAG	1 cut(s)	65
PciSI	GCTCTTC	1 cut(s)	494
PcsI	WCGNNNNNNNCGW	2 cut(s)	686, 752
PctI	GAATGC	1 cut(s)	386
PfeI	GAWTC	2 cut(s)	27, 344
PfoI	TCCNGGA	1 cut(s)	541
PkrI	GCNGC	5 cut(s)	113, 178, 649, 652, 782
PleI	GAGTC	3 cut(s)	41, 76, 137
PpsI	GAGTC	3 cut(s)	41, 76, 137
PpuMI	RGGWCCY	1 cut(s)	489
Psp124BI	GAGCTC	3 cut(s)	206, 506, 596
Psp5II	RGGWCCY	1 cut(s)	489
Psp6I	CCWGG	2 cut(s)	189, 384
PspGI	CCWGG	2 cut(s)	189, 384
PspN4I	GGNNCC	2 cut(s)	490, 529
PspPI	GGNCC	3 cut(s)	212, 388, 489
PspPPI	RGGWCCY	1 cut(s)	489
PspXI	VCTCGAGB	1 cut(s)	65
PsuI	RGATCY	4 cut(s)	14, 159, 229, 401
RruI	TCGCGA	1 cut(s)	222
SacI	GAGCTC	3 cut(s)	206, 506, 596
SapI	GCTCTTC	1 cut(s)	494
SaqAI	TTAA	3 cut(s)	23, 374, 494
SatI	GCNGC	5 cut(s)	112, 177, 648, 651, 781
Sau3AI	GATC	8 cut(s)	14, 159, 217, 223, 229, 281, 395, 401
Sau96I	GGNCC	3 cut(s)	212, 388, 489
SchI	GAGTC	3 cut(s)	41, 77, 137
ScrFI	CCNGG	5 cut(s)	19, 44, 191, 386, 543
SduI	GDGCHC	4 cut(s)	206, 245, 506, 596
SexAI	ACCWGGT	1 cut(s)	189
SfaNI	GCATC	1 cut(s)	691
Sfr274I	CTCGAG	1 cut(s)	65
SinI	GGWCC	3 cut(s)	212, 388, 489
SlaI	CTCGAG	1 cut(s)	65
SmlI	CTYRAG	1 cut(s)	65
SmoI	CTYRAG	1 cut(s)	65
SpeI	ACTAGT	1 cut(s)	566
Sse9I	AATT	3 cut(s)	619, 763, 773
SsiI	CCGC	8 cut(s)	90, 96, 109, 150, 176, 246, 441, 468
SspMI	CTAG	3 cut(s)	399, 425, 567
SstI	GAGCTC	3 cut(s)	206, 506, 596
StyD4I	CCNGG	5 cut(s)	17, 42, 189, 384, 541
TaaI	ACNGT	3 cut(s)	185, 275, 392
TaiI	ACGT	1 cut(s)	683
TaqI	TCGA	6 cut(s)	66, 280, 394, 689, 755, 771
TasI	AATT	3 cut(s)	619, 763, 773
TauI	GCSGC	1 cut(s)	179
TfiI	GAWTC	2 cut(s)	27, 344
Tru1I	TTAA	3 cut(s)	23, 374, 494
Tru9I	TTAA	3 cut(s)	23, 374, 494
TscAI	CASTG	1 cut(s)	214
TseFI	GTSAC	3 cut(s)	185, 463, 742
TseI	GCWGC	4 cut(s)	111, 647, 650, 780
Tsp45I	GTSAC	3 cut(s)	185, 463, 742
TspRI	CASTG	1 cut(s)	214
VpaK11BI	GGWCC	3 cut(s)	212, 388, 489
XbaI	TCTAGA	1 cut(s)	398
XhoI	CTCGAG	1 cut(s)	65
XspI	CTAG	3 cut(s)	399, 425, 567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.