Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001572.1

Orthogroup ID

OG0000089

Physical Location & Seq

Genomic Coordinates Forward (+)

154947 .. 158324

Gene Structure 3378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001572.1_g000045.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 933 bp

atgatagtttgggtagatattccaaagaatcatgaagcctttttatggaggcctacaattgatatgacatgcattgaagatgctgtgaattctgctatagcatggcctgctaacaaagttgttttggaaaagatatcagaaagtcaagatggtgaaaatgcatcctctccttcgagtgtcaactccaaatcaaagaaaaggtggaagttgttggatgttagtggatcgggagaaatagttgctaaaggacgctggtcctcaagtgatccagatcaggttgttcattttgttcccttggggcctaatgctatgagagtttgggtagatacaccgaaagtcccaactgcatccctttggaggccatcatctaagctggttagggtttcggctttctgtgcaattttcaactgctccaccataagttctgttgatgccatggctgctcatctcgcgtcctctcttgcaatcgctgaggggaccatggaggaagcagagggccaatgtgtgctctttaccttctcagacccggcgaactggatcaggacttggaatggggcgccatggggtttcaacagagcctttatggcactggcagagtataatgaagtgactttccaagagattgacaagcccggcaagaagatgggtaagtatcatattcgggttgaaattctgttatctcaatctctgtcatttcagcgggggtattgggtagaagacacagtggaatttctatgcaagttccgctatgataaactatttggtcgttgtggggtttgtggttttattaccgaggtcgggttgccatgttcagggcctgctttggatgaagatgatgcgacggtggagcacacggtgttaggtgaactagcagcgatgcaggtgggggcgggtctacagctaactcaggcttcgaataagcgatatttttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004527 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0016888 GO:0016893 GO:0017108 GO:0022402 GO:0022414 GO:0033554 GO:0034641 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048256 GO:0048285 GO:0050896 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0070192 GO:0070336 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

HIRAN VRR_NUC

Protein Analysis

310

Amino Acids

34.27

Weight (kDa)

5.49

Isoelectric Point (pI)

34.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42700
fragaria_vesca	FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica	MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis	pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis	RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata	RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora	Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii	Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa	Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha	Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana	Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	871
Acc36I	ACCTGC	1 cut(s)	871
AccB1I	GGYRCC	1 cut(s)	556
AccI	GTMKAC	1 cut(s)	895
AccII	CGCG	1 cut(s)	452
AciI	CCGC	3 cut(s)	700, 745, 890
AclWI	GGATC	3 cut(s)	232, 260, 545
AcsI	RAATTY	3 cut(s)	88, 669, 728
AcyI	GRCGYC	1 cut(s)	557
AdeI	CACNNNGTG	1 cut(s)	856
AfiI	CCNNNNNNNGG	4 cut(s)	45, 357, 798, 812
AgsI	TTSAA	4 cut(s)	77, 406, 571, 668
AluBI	AGCT	2 cut(s)	373, 901
AluI	AGCT	2 cut(s)	373, 901
Alw21I	GWGCWC	2 cut(s)	510, 852
AlwI	GGATC	3 cut(s)	232, 260, 545
AlwNI	CAGNNNCTG	1 cut(s)	818
AoxI	GGCC	6 cut(s)	50, 104, 299, 359, 496, 815
ApeKI	GCWGC	2 cut(s)	440, 872
ApoI	RAATTY	3 cut(s)	88, 669, 728
AspLEI	GCGC	1 cut(s)	559
AspS9I	GGNCC	5 cut(s)	255, 299, 477, 496, 815
AsuC2I	CCSGG	2 cut(s)	527, 633
AsuHPI	GGTGA	2 cut(s)	164, 875
AsuII	TTCGAA	1 cut(s)	914
AvaII	GGWCC	2 cut(s)	255, 477
BanI	GGYRCC	1 cut(s)	556
BbsI	GAAGAC	1 cut(s)	723
Bbv12I	GWGCWC	2 cut(s)	510, 852
BbvCI	CCTCAGC	1 cut(s)	471
BbvI	GCAGC	2 cut(s)	427, 884
BccI	CCATC	3 cut(s)	143, 370, 637
BcnI	CCSGG	2 cut(s)	527, 633
BfaI	CTAG	1 cut(s)	869
BfmI	CTRYAG	2 cut(s)	96, 896
BfoI	RGCGCY	1 cut(s)	560
BfuAI	ACCTGC	1 cut(s)	871
BglI	GCCNNNNNGGC	1 cut(s)	584
BisI	GCNGC	2 cut(s)	441, 873
BlsI	GCNGC	2 cut(s)	442, 874
Bme1390I	CCNGG	2 cut(s)	527, 633
Bme18I	GGWCC	2 cut(s)	255, 477
BmgT120I	GGNCC	5 cut(s)	255, 299, 477, 496, 815
BmiI	GGNNCC	3 cut(s)	300, 478, 558
BmrFI	CCNGG	2 cut(s)	527, 633
BmsI	GCATC	6 cut(s)	70, 170, 356, 421, 826, 867
BoxI	GACNNNNGTC	1 cut(s)	253
BpiI	GAAGAC	1 cut(s)	723
Bpu10I	CCTNAGC	1 cut(s)	471
Bpu14I	TTCGAA	1 cut(s)	914
BpuEI	CTTGAG	1 cut(s)	244
BpuMI	CCSGG	2 cut(s)	527, 633
BsaBI	GATNNNNATC	1 cut(s)	270
BsaHI	GRCGYC	1 cut(s)	557
BsaJI	CCNNGG	5 cut(s)	294, 435, 480, 560, 792
BsaXI	ACNNNNNCTCC	2 cut(s)	222, 252
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 357, 798, 812
Bse1I	ACTGG	2 cut(s)	539, 594
Bse8I	GATNNNNATC	1 cut(s)	270
BseDI	CCNNGG	5 cut(s)	294, 435, 480, 560, 792
BseGI	GGATG	4 cut(s)	161, 220, 347, 832
BseJI	GATNNNNATC	1 cut(s)	270
BseLI	CCNNNNNNNGG	4 cut(s)	45, 357, 798, 812
BseMII	CTCAG	3 cut(s)	462, 534, 920
BseNI	ACTGG	2 cut(s)	539, 594
BseXI	GCAGC	2 cut(s)	427, 884
Bsh1236I	CGCG	1 cut(s)	452
BshFI	GGCC	6 cut(s)	52, 106, 301, 361, 498, 817
BshNI	GGYRCC	1 cut(s)	556
BsiHKAI	GWGCWC	2 cut(s)	510, 852
BsiSI	CCGG	2 cut(s)	527, 633
BslFI	GGGAC	2 cut(s)	323, 490
BslI	CCNNNNNNNGG	4 cut(s)	45, 357, 798, 812
BsmFI	GGGAC	2 cut(s)	323, 490
BsnI	GGCC	6 cut(s)	52, 106, 301, 361, 498, 817
Bsp119I	TTCGAA	1 cut(s)	914
Bsp1286I	GDGCHC	2 cut(s)	510, 852
Bsp143I	GATC	4 cut(s)	224, 265, 271, 537
Bsp19I	CCATGG	3 cut(s)	435, 480, 560
BspACI	CCGC	3 cut(s)	700, 745, 890
BspANI	GGCC	6 cut(s)	52, 106, 301, 361, 498, 817
BspCNI	CTCAG	3 cut(s)	463, 533, 919
BspFNI	CGCG	1 cut(s)	452
BspHI	TCATGA	1 cut(s)	31
BspLI	GGNNCC	3 cut(s)	300, 478, 558
BspMI	ACCTGC	1 cut(s)	871
BspPI	GGATC	3 cut(s)	232, 260, 545
BspT104I	TTCGAA	1 cut(s)	914
BspT107I	GGYRCC	1 cut(s)	556
BsrI	ACTGG	2 cut(s)	539, 594
BssECI	CCNNGG	5 cut(s)	294, 435, 480, 560, 792
BssMI	GATC	4 cut(s)	224, 265, 271, 537
BssNI	GRCGYC	1 cut(s)	557
BssT1I	CCWWGG	4 cut(s)	294, 435, 480, 560
Bst4CI	ACNGT	3 cut(s)	724, 844, 856
BstACI	GRCGYC	1 cut(s)	557
BstAPI	GCANNNNNTGC	1 cut(s)	107
BstBI	TTCGAA	1 cut(s)	914
BstC8I	GCNNGC	2 cut(s)	108, 819
BstDEI	CTNAG	4 cut(s)	369, 471, 520, 906
BstDSI	CCRYGG	3 cut(s)	435, 480, 560
BstF5I	GGATG	4 cut(s)	161, 220, 347, 832
BstFNI	CGCG	1 cut(s)	452
BstH2I	RGCGCY	1 cut(s)	560
BstHHI	GCGC	1 cut(s)	559
BstKTI	GATC	4 cut(s)	227, 268, 274, 540
BstMBI	GATC	4 cut(s)	224, 265, 271, 537
BstMWI	GCNNNNNNNGC	6 cut(s)	107, 395, 440, 449, 584, 744
BstNSI	RCATGY	1 cut(s)	72
BstPAI	GACNNNNGTC	1 cut(s)	253
BstSCI	CCNGG	2 cut(s)	525, 631
BstSFI	CTRYAG	2 cut(s)	96, 896
BstUI	CGCG	1 cut(s)	452
BstV1I	GCAGC	2 cut(s)	427, 884
BstV2I	GAAGAC	1 cut(s)	723
BsuRI	GGCC	6 cut(s)	52, 106, 301, 361, 498, 817
BtgI	CCRYGG	3 cut(s)	435, 480, 560
BtgZI	GCGATG	1 cut(s)	890
BtsCI	GGATG	4 cut(s)	161, 220, 347, 832
BtsIMutI	CAGTG	2 cut(s)	587, 729
BveI	ACCTGC	1 cut(s)	871
Cac8I	GCNNGC	2 cut(s)	108, 819
CaiI	CAGNNNCTG	1 cut(s)	818
CciI	TCATGA	1 cut(s)	31
CfoI	GCGC	1 cut(s)	559
Cfr13I	GGNCC	5 cut(s)	255, 299, 477, 496, 815
CseI	GACGC	2 cut(s)	258, 441
CviAII	CATG	7 cut(s)	32, 69, 102, 436, 481, 561, 807
DdeI	CTNAG	4 cut(s)	369, 471, 520, 906
DinI	GGCGCC	1 cut(s)	558
DpnI	GATC	4 cut(s)	226, 267, 273, 539
DpnII	GATC	4 cut(s)	224, 265, 271, 537
DraIII	CACNNNGTG	1 cut(s)	856
Eco130I	CCWWGG	4 cut(s)	294, 435, 480, 560
Eco147I	AGGCCT	1 cut(s)	52
Eco32I	GATATC	1 cut(s)	135
Eco47I	GGWCC	2 cut(s)	255, 477
EcoO109I	RGGNCCY	2 cut(s)	299, 815
EcoRI	GAATTC	1 cut(s)	88
EcoRV	GATATC	1 cut(s)	135
EcoT14I	CCWWGG	4 cut(s)	294, 435, 480, 560
EcoT22I	ATGCAT	2 cut(s)	74, 163
EgeI	GGCGCC	1 cut(s)	558
EheI	GGCGCC	1 cut(s)	558
ErhI	CCWWGG	4 cut(s)	294, 435, 480, 560
FaeI	CATG	7 cut(s)	35, 72, 105, 439, 484, 564, 810
FaqI	GGGAC	2 cut(s)	323, 490
FatI	CATG	7 cut(s)	31, 68, 101, 435, 480, 560, 806
FauI	CCCGC	2 cut(s)	693, 883
FblI	GTMKAC	1 cut(s)	895
Fnu4HI	GCNGC	2 cut(s)	441, 873
FokI	GGATG	4 cut(s)	148, 227, 334, 839
Fsp4HI	GCNGC	2 cut(s)	441, 873
FspBI	CTAG	1 cut(s)	869
GlaI	GCGC	1 cut(s)	558
GluI	GCNGC	2 cut(s)	441, 873
HaeII	RGCGCY	1 cut(s)	560
HaeIII	GGCC	6 cut(s)	52, 106, 301, 361, 498, 817
HapII	CCGG	2 cut(s)	527, 633
HgaI	GACGC	2 cut(s)	258, 441
HhaI	GCGC	1 cut(s)	559
Hin1I	GRCGYC	1 cut(s)	557
Hin1II	CATG	7 cut(s)	35, 72, 105, 439, 484, 564, 810
Hin6I	GCGC	1 cut(s)	557
HinP1I	GCGC	1 cut(s)	557
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HinfI	GANTC	1 cut(s)	28
HpaII	CCGG	2 cut(s)	527, 633
HphI	GGTGA	2 cut(s)	164, 875
Hpy166II	GTNNAC	3 cut(s)	181, 866, 896
Hpy188I	TCNGA	2 cut(s)	139, 523
Hpy188III	TCNNGA	5 cut(s)	32, 146, 228, 269, 541
Hpy8I	GTNNAC	3 cut(s)	181, 866, 896
Hpy99I	CGWCG	1 cut(s)	844
HpyAV	CCTTC	2 cut(s)	180, 526
HpyCH4III	ACNGT	3 cut(s)	724, 844, 856
HpyCH4V	TGCA	7 cut(s)	72, 161, 347, 398, 464, 738, 880
HpyF10VI	GCNNNNNNNGC	6 cut(s)	107, 395, 440, 449, 584, 744
HpyF3I	CTNAG	4 cut(s)	369, 471, 520, 906
Hsp92I	GRCGYC	1 cut(s)	557
Hsp92II	CATG	7 cut(s)	35, 72, 105, 439, 484, 564, 810
HspAI	GCGC	1 cut(s)	557
KasI	GGCGCC	1 cut(s)	556
Kzo9I	GATC	4 cut(s)	224, 265, 271, 537
LmnI	GCTCC	2 cut(s)	416, 847
Lsp1109I	GCAGC	2 cut(s)	427, 884
LweI	GCATC	6 cut(s)	70, 170, 356, 421, 826, 867
MaeI	CTAG	1 cut(s)	869
MaeIII	GTNAC	1 cut(s)	607
MalI	GATC	4 cut(s)	226, 267, 273, 539
MboI	GATC	4 cut(s)	224, 265, 271, 537
MboII	GAAGA	4 cut(s)	89, 652, 728, 842
MfeI	CAATTG	1 cut(s)	57
MhlI	GDGCHC	2 cut(s)	510, 852
MluCI	AATT	5 cut(s)	57, 88, 399, 669, 728
Mly113I	GGCGCC	1 cut(s)	557
MmeI	TCCRAC	1 cut(s)	192
MnlI	CCTC	9 cut(s)	42, 175, 268, 351, 466, 466, 478, 487, 787
Mph1103I	ATGCAT	2 cut(s)	74, 163
MseI	TTAA	1 cut(s)	931
MspA1I	CMGCKG	1 cut(s)	700
MspI	CCGG	2 cut(s)	527, 633
MspR9I	CCNGG	2 cut(s)	527, 633
MunI	CAATTG	1 cut(s)	57
MvnI	CGCG	1 cut(s)	452
MwoI	GCNNNNNNNGC	6 cut(s)	107, 395, 440, 449, 584, 744
NarI	GGCGCC	1 cut(s)	557
NciI	CCSGG	2 cut(s)	527, 633
NcoI	CCATGG	3 cut(s)	435, 480, 560
NdeII	GATC	4 cut(s)	224, 265, 271, 537
NlaIII	CATG	7 cut(s)	35, 72, 105, 439, 484, 564, 810
NlaIV	GGNNCC	3 cut(s)	300, 478, 558
NmuCI	GTSAC	1 cut(s)	607
NsiI	ATGCAT	2 cut(s)	74, 163
NspI	RCATGY	1 cut(s)	72
NspV	TTCGAA	1 cut(s)	914
PagI	TCATGA	1 cut(s)	31
PaqCI	CACCTGC	1 cut(s)	871
PceI	AGGCCT	1 cut(s)	52
PfeI	GAWTC	1 cut(s)	28
PkrI	GCNGC	2 cut(s)	442, 874
PluTI	GGCGCC	1 cut(s)	560
PshAI	GACNNNNGTC	1 cut(s)	253
PspN4I	GGNNCC	3 cut(s)	300, 478, 558
PspPI	GGNCC	5 cut(s)	255, 299, 477, 496, 815
PstNI	CAGNNNCTG	1 cut(s)	818
SaqAI	TTAA	1 cut(s)	931
SatI	GCNGC	2 cut(s)	441, 873
Sau3AI	GATC	4 cut(s)	224, 265, 271, 537
Sau96I	GGNCC	5 cut(s)	255, 299, 477, 496, 815
ScrFI	CCNGG	2 cut(s)	527, 633
SduI	GDGCHC	2 cut(s)	510, 852
SetI	ASST	8 cut(s)	203, 279, 375, 518, 798, 865, 885, 903
SfaNI	GCATC	6 cut(s)	70, 170, 356, 421, 826, 867
SfcI	CTRYAG	2 cut(s)	96, 896
SfoI	GGCGCC	1 cut(s)	558
SfuI	TTCGAA	1 cut(s)	914
SinI	GGWCC	2 cut(s)	255, 477
SmlI	CTYRAG	1 cut(s)	259
SmoI	CTYRAG	1 cut(s)	259
Sse9I	AATT	5 cut(s)	57, 88, 399, 669, 728
SseBI	AGGCCT	1 cut(s)	52
SsiI	CCGC	3 cut(s)	700, 745, 890
SspDI	GGCGCC	1 cut(s)	556
SspMI	CTAG	1 cut(s)	869
StuI	AGGCCT	1 cut(s)	52
StyD4I	CCNGG	2 cut(s)	525, 631
StyI	CCWWGG	4 cut(s)	294, 435, 480, 560
TaaI	ACNGT	3 cut(s)	724, 844, 856
TaqI	TCGA	2 cut(s)	173, 914
TasI	AATT	5 cut(s)	57, 88, 399, 669, 728
TfiI	GAWTC	1 cut(s)	28
Tru1I	TTAA	1 cut(s)	931
Tru9I	TTAA	1 cut(s)	931
TscAI	CASTG	2 cut(s)	594, 729
TseFI	GTSAC	1 cut(s)	607
TseI	GCWGC	2 cut(s)	440, 872
Tsp45I	GTSAC	1 cut(s)	607
TspDTI	ATGAA	4 cut(s)	48, 272, 618, 843
TspRI	CASTG	2 cut(s)	594, 729
VpaK11BI	GGWCC	2 cut(s)	255, 477
XapI	RAATTY	3 cut(s)	88, 669, 728
XceI	RCATGY	1 cut(s)	72
XmiI	GTMKAC	1 cut(s)	895
XspI	CTAG	1 cut(s)	869
Zsp2I	ATGCAT	2 cut(s)	74, 163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.