Rh2AG234800

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000089
Physical Location & Seq
Reverse (-)
25304183 .. 25311820
7638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG234800.1

Sequence Viewer

Length: 1260 bp
ATGAAGAATGCTCCCGTACCATGCCACCATTTTGTGAATGGATCTAGTTCAGAGTATGAGCAAAGAGGATTACATTTTGTGAAGACGGCTGAAAAGGACTTGGGATATCCTGCAATGATTCTTTGCCCTTGCAAAGATTGCCGTAATGTAAGCCATCAAGATAGTACTATTGTTTTTGAACATTTGGTTATAAAGGGGATGTATTCCAAGTACAAGAAAAGATCACATTGGACAAAACATGGAGATCAGATAGTAAATGTTGAAAGTGTTGATCATGAAACCACCAAGGATAAGGCATATAACTTATATAGAGCTGCCTACTTTATGGATGAAGATTATGTCCAGCCTACAAACTCTATGGATGAAGCTACTGTACAGAGGCAAGATGATCAATTCATGAAGAACCTAGAAGATGCAGAAACTCCTTTATACCCAGGTCGCAGTAAGAGGAAGCATACTAAGGAAACCGATGGAATATCACAAGACTTTGATGCAAGAGATGTGAATCCCATGGCAGGTCTCCAAGAAGTACATACACAAGTTAGTAAAGAAGCTACCCAAGATGGACCAATTCCAAGTAATGATAGTTCTGAACAAGATGCGGTCCAAGAAAATGCATTTGTACAAGATACAGTTGAAGACCCAAGAGGATTGAAAAAGAAAAGAGGTCCAAACAAAATGAAGAAAGTTGCTATGGACCCTGAGAGTCGGATTCAAGTTCAATTTAATAGCTTGGGTGAACCATATGGAGAGGGGTCAGTAAGCTTGTCATCTTTTTTGGGCCCTCTTGTACGAGAACATGTACCTGTAACACTTGATGATTGGAGGAACCTTGGTGATGACCTTAAAGTACCATTATGGGAAGAAGTTCAGGCAAGATACATCTTGGATGAAGAATGGCAAAAAGATGTCATATTTAAGTCGATGGGATGCCTTTGGAGGGCCTCAAAATCTAGATTAGTTCGTCAAATACAAGCAGCAAAGAACAAACAAGAAAGACTTCGGCTCAAACCAGACAACATACCAACTTTAGCAATTTGGAAGAAGTTTGTCAAGACAAAAACAAGTCCAACATTTAAGGCTATAAGTGACAAGTACAAGGCATTGAGGCGTAAACAAGTACCACACACATGCAGTCGCAAGGGAATGGTTCGATTAGCAGTTGATATGAAAAGAGATGGTGCCAACCCATCTTCTGTGTCAAGGGTTAAAGTTTGGATCAAATCTGGCACAAAAAAAGATGGTACACCTGTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

419

Amino Acids

47.87

Weight (kDa)

9.12

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 13 - 81 1.7e-13 Transposase-associated domain
Transposase_24 PF03004 346 - 419 4e-10 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 191
Acc36I ACCTGC 1 cut(s) 506
AccB1I GGYRCC 1 cut(s) 1181
AciI CCGC 1 cut(s) 602
AclWI GGATC 2 cut(s) 49, 1226
AfiI CCNNNNNNNGG 2 cut(s) 515, 940
AflIII ACRYGT 1 cut(s) 799
AgsI TTSAA 6 cut(s) 179, 263, 638, 655, 716, 722
AjnI CCWGG 1 cut(s) 433
AluBI AGCT 5 cut(s) 314, 368, 554, 732, 765
AluI AGCT 5 cut(s) 314, 368, 554, 732, 765
Alw26I GTCTC 1 cut(s) 524
AlwI GGATC 2 cut(s) 49, 1226
AoxI GGCC 2 cut(s) 781, 942
ApaI GGGCCC 1 cut(s) 785
ApeKI GCWGC 2 cut(s) 314, 977
Asp700I GAANNNNTTC 2 cut(s) 867, 999
AspS9I GGNCC 7 cut(s) 566, 604, 668, 697, 781, 782, 942
AsuHPI GGTGA 2 cut(s) 749, 848
AvaII GGWCC 4 cut(s) 566, 604, 668, 697
BaeGI GKGCMC 1 cut(s) 785
BaeI ACNNNNGTAYC 1 cut(s) 1236
BanI GGYRCC 1 cut(s) 1181
BanII GRGCYC 1 cut(s) 785
BarI GAAGNNNNNNTAC 2 cut(s) 357, 389
BbsI GAAGAC 2 cut(s) 89, 645
BbvI GCAGC 2 cut(s) 301, 989
BccI CCATC 7 cut(s) 162, 464, 557, 919, 1172, 1198, 1235
BceAI ACGGC 2 cut(s) 102, 126
BciT130I CCWGG 1 cut(s) 435
BclI TGATCA 2 cut(s) 271, 388
BcoDI GTCTC 1 cut(s) 524
BfaI CTAG 3 cut(s) 45, 407, 954
BfuAI ACCTGC 1 cut(s) 506
BisI GCNGC 2 cut(s) 315, 978
BlsI GCNGC 2 cut(s) 316, 979
BmcAI AGTACT 1 cut(s) 166
Bme1390I CCNGG 1 cut(s) 435
Bme18I GGWCC 4 cut(s) 566, 604, 668, 697
BmgT120I GGNCC 7 cut(s) 566, 604, 668, 697, 781, 782, 942
BmiI GGNNCC 4 cut(s) 699, 783, 830, 1183
BmrFI CCNGG 1 cut(s) 435
BmsI GCATC 4 cut(s) 403, 481, 589, 920
BpiI GAAGAC 2 cut(s) 89, 645
BsaBI GATNNNNATC 1 cut(s) 504
BsaI GGTCTC 1 cut(s) 524
BsaJI CCNNGG 4 cut(s) 285, 433, 510, 832
Bsc4I CCNNNNNNNGG 2 cut(s) 515, 940
Bse3DI GCAATG 1 cut(s) 120
Bse8I GATNNNNATC 1 cut(s) 504
BseBI CCWGG 1 cut(s) 435
BseDI CCNNGG 4 cut(s) 285, 433, 510, 832
BseGI GGATG 5 cut(s) 204, 334, 367, 895, 935
BseJI GATNNNNATC 1 cut(s) 504
BseLI CCNNNNNNNGG 2 cut(s) 515, 940
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 1 cut(s) 693
BseSI GKGCMC 1 cut(s) 785
BseXI GCAGC 2 cut(s) 301, 989
BshFI GGCC 2 cut(s) 783, 944
BshNI GGYRCC 1 cut(s) 1181
BslI CCNNNNNNNGG 2 cut(s) 515, 940
BsmAI GTCTC 1 cut(s) 524
BsmI GAATGC 1 cut(s) 13
BsnI GGCC 2 cut(s) 783, 944
Bso31I GGTCTC 1 cut(s) 524
Bsp120I GGGCCC 1 cut(s) 781
Bsp1286I GDGCHC 1 cut(s) 785
Bsp1407I TGTACA 2 cut(s) 373, 622
Bsp143I GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
Bsp19I CCATGG 1 cut(s) 510
BspACI CCGC 1 cut(s) 602
BspANI GGCC 2 cut(s) 783, 944
BspCNI CTCAG 1 cut(s) 694
BspHI TCATGA 2 cut(s) 274, 396
BspLI GGNNCC 4 cut(s) 699, 783, 830, 1183
BspMI ACCTGC 1 cut(s) 506
BspPI GGATC 2 cut(s) 49, 1226
BspT107I GGYRCC 1 cut(s) 1181
BspTNI GGTCTC 1 cut(s) 524
BsrDI GCAATG 1 cut(s) 120
BsrGI TGTACA 2 cut(s) 373, 622
BssECI CCNNGG 4 cut(s) 285, 433, 510, 832
BssMI GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
BssT1I CCWWGG 3 cut(s) 285, 510, 832
Bst2UI CCWGG 1 cut(s) 435
Bst4CI ACNGT 2 cut(s) 373, 634
BstAPI GCANNNNNTGC 1 cut(s) 138
BstAUI TGTACA 2 cut(s) 373, 622
BstDEI CTNAG 2 cut(s) 459, 702
BstDSI CCRYGG 1 cut(s) 510
BstF5I GGATG 5 cut(s) 204, 334, 367, 895, 935
BstKTI GATC 6 cut(s) 44, 224, 247, 274, 391, 1221
BstMAI GTCTC 1 cut(s) 524
BstMBI GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
BstMWI GCNNNNNNNGC 1 cut(s) 138
BstNI CCWGG 1 cut(s) 435
BstNSI RCATGY 2 cut(s) 803, 1134
BstSCI CCNGG 1 cut(s) 433
BstSLI GKGCMC 1 cut(s) 785
BstV1I GCAGC 2 cut(s) 301, 989
BstV2I GAAGAC 2 cut(s) 89, 645
BstX2I RGATCY 1 cut(s) 41
BstYI RGATCY 1 cut(s) 41
BsuRI GGCC 2 cut(s) 783, 944
BtgI CCRYGG 1 cut(s) 510
BtsCI GGATG 5 cut(s) 204, 334, 367, 895, 935
BveI ACCTGC 1 cut(s) 506
CciI TCATGA 2 cut(s) 274, 396
Cfr13I GGNCC 7 cut(s) 566, 604, 668, 697, 781, 782, 942
CviAII CATG 7 cut(s) 21, 239, 275, 397, 511, 800, 1131
DdeI CTNAG 2 cut(s) 459, 702
DpnI GATC 6 cut(s) 43, 223, 246, 273, 390, 1220
DpnII GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
Eco130I CCWWGG 3 cut(s) 285, 510, 832
Eco24I GRGCYC 1 cut(s) 785
Eco31I GGTCTC 1 cut(s) 524
Eco32I GATATC 1 cut(s) 107
Eco47I GGWCC 4 cut(s) 566, 604, 668, 697
EcoO109I RGGNCCY 2 cut(s) 782, 942
EcoRII CCWGG 1 cut(s) 433
EcoRV GATATC 1 cut(s) 107
EcoT14I CCWWGG 3 cut(s) 285, 510, 832
EcoT22I ATGCAT 1 cut(s) 619
EcoT38I GRGCYC 1 cut(s) 785
ErhI CCWWGG 3 cut(s) 285, 510, 832
FaeI CATG 7 cut(s) 24, 242, 278, 400, 514, 803, 1134
FalI AAGNNNNNCTT 2 cut(s) 984, 1016
FatI CATG 7 cut(s) 20, 238, 274, 396, 510, 799, 1130
FauNDI CATATG 1 cut(s) 745
FbaI TGATCA 2 cut(s) 271, 388
Fnu4HI GCNGC 2 cut(s) 315, 978
FokI GGATG 5 cut(s) 211, 341, 374, 902, 942
FriOI GRGCYC 1 cut(s) 785
Fsp4HI GCNGC 2 cut(s) 315, 978
FspBI CTAG 3 cut(s) 45, 407, 954
GluI GCNGC 2 cut(s) 315, 978
HaeIII GGCC 2 cut(s) 783, 944
Hin1II CATG 7 cut(s) 24, 242, 278, 400, 514, 803, 1134
HindIII AAGCTT 1 cut(s) 763
HinfI GANTC 4 cut(s) 118, 505, 706, 712
HphI GGTGA 2 cut(s) 749, 848
Hpy166II GTNNAC 3 cut(s) 740, 1115, 1247
Hpy188I TCNGA 4 cut(s) 52, 249, 592, 711
Hpy188III TCNNGA 5 cut(s) 158, 275, 397, 954, 1054
Hpy8I GTNNAC 3 cut(s) 740, 1115, 1247
HpyCH4III ACNGT 2 cut(s) 373, 634
HpyCH4V TGCA 6 cut(s) 113, 132, 416, 494, 617, 1134
HpyF10VI GCNNNNNNNGC 1 cut(s) 138
HpyF3I CTNAG 2 cut(s) 459, 702
Hsp92II CATG 7 cut(s) 24, 242, 278, 400, 514, 803, 1134
Ksp22I TGATCA 2 cut(s) 271, 388
Kzo9I GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
LmnI GCTCC 1 cut(s) 16
Lsp1109I GCAGC 2 cut(s) 301, 989
LweI GCATC 4 cut(s) 403, 481, 589, 920
MaeI CTAG 3 cut(s) 45, 407, 954
MaeIII GTNAC 2 cut(s) 808, 1088
MalI GATC 6 cut(s) 43, 223, 246, 273, 390, 1220
MboI GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
MflI RGATCY 1 cut(s) 41
MhlI GDGCHC 1 cut(s) 785
MluCI AATT 4 cut(s) 392, 570, 722, 1035
MlyI GAGTC 1 cut(s) 715
MmeI TCCRAC 2 cut(s) 689, 1094
Mph1103I ATGCAT 1 cut(s) 619
MroXI GAANNNNTTC 2 cut(s) 867, 999
MseI TTAA 5 cut(s) 726, 846, 918, 1077, 1209
MslI CAYNNNNRTG 1 cut(s) 1129
MspR9I CCNGG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 13
MvaI CCWGG 1 cut(s) 435
MwoI GCNNNNNNNGC 1 cut(s) 138
NcoI CCATGG 1 cut(s) 510
NdeI CATATG 1 cut(s) 745
NdeII GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
NlaIII CATG 7 cut(s) 24, 242, 278, 400, 514, 803, 1134
NlaIV GGNNCC 4 cut(s) 699, 783, 830, 1183
NmuCI GTSAC 1 cut(s) 1088
NsiI ATGCAT 1 cut(s) 619
NspI RCATGY 2 cut(s) 803, 1134
PagI TCATGA 2 cut(s) 274, 396
PciI ACATGT 1 cut(s) 799
PctI GAATGC 1 cut(s) 13
PdmI GAANNNNTTC 2 cut(s) 867, 999
PfeI GAWTC 3 cut(s) 118, 505, 712
PkrI GCNGC 2 cut(s) 316, 979
PleI GAGTC 1 cut(s) 714
PpsI GAGTC 1 cut(s) 714
PscI ACATGT 1 cut(s) 799
PsiI TTATAA 1 cut(s) 191
Psp6I CCWGG 1 cut(s) 433
PspGI CCWGG 1 cut(s) 433
PspN4I GGNNCC 4 cut(s) 699, 783, 830, 1183
PspOMI GGGCCC 1 cut(s) 781
PspPI GGNCC 7 cut(s) 566, 604, 668, 697, 781, 782, 942
PsrI GAACNNNNNNTAC 2 cut(s) 571, 603
PsuI RGATCY 1 cut(s) 41
RseI CAYNNNNRTG 1 cut(s) 1129
SaqAI TTAA 5 cut(s) 726, 846, 918, 1077, 1209
SatI GCNGC 2 cut(s) 315, 978
Sau3AI GATC 6 cut(s) 41, 221, 244, 271, 388, 1218
Sau96I GGNCC 7 cut(s) 566, 604, 668, 697, 781, 782, 942
ScaI AGTACT 1 cut(s) 166
SchI GAGTC 1 cut(s) 715
ScrFI CCNGG 1 cut(s) 435
SduI GDGCHC 1 cut(s) 785
SfaNI GCATC 4 cut(s) 403, 481, 589, 920
SinI GGWCC 4 cut(s) 566, 604, 668, 697
SmiMI CAYNNNNRTG 1 cut(s) 1129
Sse9I AATT 4 cut(s) 392, 570, 722, 1035
SsiI CCGC 1 cut(s) 602
SspMI CTAG 3 cut(s) 45, 407, 954
StyD4I CCNGG 1 cut(s) 433
StyI CCWWGG 3 cut(s) 285, 510, 832
TaaI ACNGT 2 cut(s) 373, 634
TaqI TCGA 2 cut(s) 923, 1153
TasI AATT 4 cut(s) 392, 570, 722, 1035
TatI WGTACW 6 cut(s) 164, 210, 373, 529, 622, 1095
TfiI GAWTC 3 cut(s) 118, 505, 712
Tru1I TTAA 5 cut(s) 726, 846, 918, 1077, 1209
Tru9I TTAA 5 cut(s) 726, 846, 918, 1077, 1209
TseFI GTSAC 1 cut(s) 1088
TseI GCWGC 2 cut(s) 314, 977
Tsp45I GTSAC 1 cut(s) 1088
TspDTI ATGAA 9 cut(s) 17, 291, 345, 378, 385, 413, 695, 906, 1184
VpaK11BI GGWCC 4 cut(s) 566, 604, 668, 697
XbaI TCTAGA 1 cut(s) 953
XceI RCATGY 2 cut(s) 803, 1134
XcmI CCANNNNNNNNNTGG 1 cut(s) 35
XmnI GAANNNNTTC 2 cut(s) 867, 999
XspI CTAG 3 cut(s) 45, 407, 954
ZrmI AGTACT 1 cut(s) 166
Zsp2I ATGCAT 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.