Rh3BG373600

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000089
Physical Location & Seq
Reverse (-)
47225956 .. 47229049
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG373600.1

Sequence Viewer

Length: 1092 bp
ATGGTGAGTGATATTACAAGGGCAGGTCGCTGTAAGAGGAAGCATACTAAGGAAACTGGTGGAATATCACAAGACTTTGATGCAAGGGATGTGAATCACATGGCAGGTCTCCAAGAAGTACATACACAAGTTAGTAAAGAAGCTACCCAAGATGGACCAATTCCAAGTAATGATAGTTCTGAACAAGATGCGGTCAAAGAAAATGCATCTGTACAAGATACAGTTGAAGATCCAAGAGGATTGAAAAAGAAAAGAGGTCCAACCAAAATGAAGGAAGTTGCTATAGACCCTGAGAGTCGGATTCAAGTTCAATTTAATAGCTTGGGTGAACCATATGGAGAGGGGTTAGTAAGCTTGTCATCTTTTTTGGGCCCTCTTGTACGAGAGCATGTACTTGTAACACTTGATGATTGGAGGAACCTTGGTGATGACCTTAAAGTACCATTATGGGAAGAAGTTCAGGCAAGATACATCTTGGATGAAGAATGGCAAAAAGATGTCATATTTAAGTCGATGGGTTGCCTTTGGAGGGCCTCAAAATCTAGATTAGTTCGTCAAATACAAGCAGCAAAGAACAAACAAGAAAGACTTCGGCTCAAACTAGACAACATACCAACTTTAGCAATTTGGAAGAAGTTTGTCAAGACAAAAACAAGTCCAACATTTAAGGCTATAAGTGACAAGTACAAGGCATTGAGGCGTAAACAAGTACCACACACATGCAGTCGCAAGGGAATGGTTCGATTAGCAGCTGATATGGAGAAGTTAAGAGAAGTTGAAAGTAATTCACCCTCATCCTCAACAACTAATGTGAGAGAAGATGCTCTTTCCCAAGTATTAGGACAGGATAAACCTGGACGATTAAAAGGAATGGGAAGAGGAGTTACTATAAGCAAATTAGCCTTCTTACAGTCTAGGGACAAGCATGTGCTCCGGCTAGAAGAGCAACACACTGATATGCGAAGTAGAATCAAGCATTTGGAGAGCTTAGTCCATAAATTAATTGGACATCATGAGGGCCCCAGGTCAAGTTTAAATATCTTGACCCGAAACAATAAAGAGGTACAAGCATTCAAGAGGTTAGGGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

363

Amino Acids

41.14

Weight (kDa)

9.73

Isoelectric Point (pI)

44.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 209 - 257 9.2e-06 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 14, 95
AciI CCGC 1 cut(s) 191
AclWI GGATC 1 cut(s) 224
AfaI GTAC 8 cut(s) 120, 213, 381, 393, 441, 686, 711, 1065
AfiI CCNNNNNNNGG 1 cut(s) 529
AgsI TTSAA 6 cut(s) 227, 244, 305, 311, 779, 1075
AjnI CCWGG 2 cut(s) 853, 1022
AluBI AGCT 5 cut(s) 143, 321, 354, 752, 987
AluI AGCT 5 cut(s) 143, 321, 354, 752, 987
Alw21I GWGCWC 1 cut(s) 933
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 1 cut(s) 224
AoxI GGCC 3 cut(s) 370, 531, 1018
ApaI GGGCCC 2 cut(s) 374, 1022
ApeKI GCWGC 2 cut(s) 566, 749
AseI ATTAAT 1 cut(s) 1001
Asp700I GAANNNNTTC 2 cut(s) 456, 588
AspS9I GGNCC 7 cut(s) 155, 257, 370, 371, 531, 1018, 1019
AsuHPI GGTGA 4 cut(s) 16, 338, 437, 780
AvaII GGWCC 2 cut(s) 155, 257
BaeGI GKGCMC 2 cut(s) 374, 1022
BanII GRGCYC 2 cut(s) 374, 1022
BarI GAAGNNNNNNTAC 2 cut(s) 868, 900
Bbv12I GWGCWC 1 cut(s) 933
BbvI GCAGC 2 cut(s) 578, 761
BccI CCATC 2 cut(s) 146, 508
BciT130I CCWGG 2 cut(s) 855, 1024
BcoDI GTCTC 1 cut(s) 113
BfaI CTAG 4 cut(s) 543, 602, 915, 938
BfmI CTRYAG 1 cut(s) 282
BfuAI ACCTGC 2 cut(s) 14, 95
BisI GCNGC 2 cut(s) 567, 750
BlsI GCNGC 2 cut(s) 568, 751
Bme1390I CCNGG 2 cut(s) 855, 1024
Bme18I GGWCC 2 cut(s) 155, 257
BmgT120I GGNCC 7 cut(s) 155, 257, 370, 371, 531, 1018, 1019
BmiI GGNNCC 4 cut(s) 372, 419, 1020, 1021
BmrFI CCNGG 2 cut(s) 855, 1024
BmsI GCATC 4 cut(s) 70, 178, 215, 811
BsaBI GATNNNNATC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 113
BsaJI CCNNGG 2 cut(s) 421, 1022
Bsc4I CCNNNNNNNGG 1 cut(s) 529
Bse1I ACTGG 1 cut(s) 61
Bse8I GATNNNNATC 1 cut(s) 93
BseBI CCWGG 2 cut(s) 855, 1024
BseDI CCNNGG 2 cut(s) 421, 1022
BseGI GGATG 3 cut(s) 94, 484, 794
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 529
BseMII CTCAG 1 cut(s) 282
BseNI ACTGG 1 cut(s) 61
BseRI GAGGAG 1 cut(s) 894
BseSI GKGCMC 2 cut(s) 374, 1022
BseXI GCAGC 2 cut(s) 578, 761
BshFI GGCC 3 cut(s) 372, 533, 1020
BsiHKAI GWGCWC 1 cut(s) 933
BsiSI CCGG 1 cut(s) 934
BslFI GGGAC 1 cut(s) 932
BslI CCNNNNNNNGG 1 cut(s) 529
BsmAI GTCTC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 932
BsmI GAATGC 1 cut(s) 1070
BsnI GGCC 3 cut(s) 372, 533, 1020
Bso31I GGTCTC 1 cut(s) 113
Bsp120I GGGCCC 2 cut(s) 370, 1018
Bsp1286I GDGCHC 3 cut(s) 374, 933, 1022
Bsp1407I TGTACA 1 cut(s) 211
Bsp143I GATC 1 cut(s) 229
BspACI CCGC 1 cut(s) 191
BspANI GGCC 3 cut(s) 372, 533, 1020
BspCNI CTCAG 1 cut(s) 283
BspHI TCATGA 1 cut(s) 1012
BspLI GGNNCC 4 cut(s) 372, 419, 1020, 1021
BspMI ACCTGC 2 cut(s) 14, 95
BspPI GGATC 1 cut(s) 224
BspQI GCTCTTC 1 cut(s) 936
BspTNI GGTCTC 1 cut(s) 113
BsrGI TGTACA 1 cut(s) 211
BsrI ACTGG 1 cut(s) 61
BssECI CCNNGG 2 cut(s) 421, 1022
BssMI GATC 1 cut(s) 229
BssT1I CCWWGG 1 cut(s) 421
Bst2UI CCWGG 2 cut(s) 855, 1024
Bst4CI ACNGT 2 cut(s) 223, 912
Bst6I CTCTTC 2 cut(s) 871, 936
BstAUI TGTACA 1 cut(s) 211
BstDEI CTNAG 3 cut(s) 48, 291, 988
BstF5I GGATG 3 cut(s) 94, 484, 794
BstKTI GATC 1 cut(s) 232
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 1 cut(s) 229
BstMWI GCNNNNNNNGC 1 cut(s) 943
BstNI CCWGG 2 cut(s) 855, 1024
BstNSI RCATGY 3 cut(s) 392, 723, 929
BstSCI CCNGG 2 cut(s) 853, 1022
BstSFI CTRYAG 1 cut(s) 282
BstSLI GKGCMC 2 cut(s) 374, 1022
BstV1I GCAGC 2 cut(s) 578, 761
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BsuRI GGCC 3 cut(s) 372, 533, 1020
BtsCI GGATG 3 cut(s) 94, 484, 794
BtsIMutI CAGTG 1 cut(s) 951
BveI ACCTGC 2 cut(s) 14, 95
CciI TCATGA 1 cut(s) 1012
Cfr13I GGNCC 7 cut(s) 155, 257, 370, 371, 531, 1018, 1019
Csp6I GTAC 8 cut(s) 119, 212, 380, 392, 440, 685, 710, 1064
CviAII CATG 5 cut(s) 100, 389, 720, 926, 1013
CviQI GTAC 8 cut(s) 119, 212, 380, 392, 440, 685, 710, 1064
DdeI CTNAG 3 cut(s) 48, 291, 988
DpnI GATC 1 cut(s) 231
DpnII GATC 1 cut(s) 229
DraI TTTAAA 1 cut(s) 1035
Eam1104I CTCTTC 2 cut(s) 871, 936
EarI CTCTTC 2 cut(s) 871, 936
Eco130I CCWWGG 1 cut(s) 421
Eco24I GRGCYC 2 cut(s) 374, 1022
Eco31I GGTCTC 1 cut(s) 113
Eco47I GGWCC 2 cut(s) 155, 257
EcoO109I RGGNCCY 4 cut(s) 371, 531, 1018, 1019
EcoRII CCWGG 2 cut(s) 853, 1022
EcoT14I CCWWGG 1 cut(s) 421
EcoT22I ATGCAT 1 cut(s) 208
EcoT38I GRGCYC 2 cut(s) 374, 1022
ErhI CCWWGG 1 cut(s) 421
FaeI CATG 5 cut(s) 103, 392, 723, 929, 1016
FalI AAGNNNNNCTT 4 cut(s) 573, 605, 810, 842
FaqI GGGAC 1 cut(s) 932
FatI CATG 5 cut(s) 99, 388, 719, 925, 1012
FauNDI CATATG 1 cut(s) 334
Fnu4HI GCNGC 2 cut(s) 567, 750
FokI GGATG 3 cut(s) 101, 491, 781
FriOI GRGCYC 2 cut(s) 374, 1022
Fsp4HI GCNGC 2 cut(s) 567, 750
FspBI CTAG 4 cut(s) 543, 602, 915, 938
GluI GCNGC 2 cut(s) 567, 750
HaeIII GGCC 3 cut(s) 372, 533, 1020
HapII CCGG 1 cut(s) 934
Hin1II CATG 5 cut(s) 103, 392, 723, 929, 1016
HindIII AAGCTT 1 cut(s) 352
HinfI GANTC 4 cut(s) 94, 295, 301, 969
HpaII CCGG 1 cut(s) 934
HphI GGTGA 4 cut(s) 16, 338, 437, 780
Hpy166II GTNNAC 2 cut(s) 329, 704
Hpy188I TCNGA 2 cut(s) 181, 300
Hpy188III TCNNGA 5 cut(s) 543, 643, 1013, 1042, 1075
Hpy8I GTNNAC 2 cut(s) 329, 704
HpyAV CCTTC 2 cut(s) 265, 913
HpyCH4III ACNGT 2 cut(s) 223, 912
HpyCH4V TGCA 3 cut(s) 83, 206, 723
HpyF10VI GCNNNNNNNGC 1 cut(s) 943
HpyF3I CTNAG 3 cut(s) 48, 291, 988
Hsp92II CATG 5 cut(s) 103, 392, 723, 929, 1016
Kzo9I GATC 1 cut(s) 229
LguI GCTCTTC 1 cut(s) 936
LmnI GCTCC 1 cut(s) 936
Lsp1109I GCAGC 2 cut(s) 578, 761
LweI GCATC 4 cut(s) 70, 178, 215, 811
MaeI CTAG 4 cut(s) 543, 602, 915, 938
MaeIII GTNAC 3 cut(s) 397, 677, 883
MalI GATC 1 cut(s) 231
MboI GATC 1 cut(s) 229
MboII GAAGA 7 cut(s) 239, 464, 494, 643, 830, 888, 953
MflI RGATCY 1 cut(s) 229
MhlI GDGCHC 3 cut(s) 374, 933, 1022
MluCI AATT 7 cut(s) 159, 311, 624, 784, 896, 998, 1002
MlyI GAGTC 1 cut(s) 304
MmeI TCCRAC 3 cut(s) 278, 284, 683
Mph1103I ATGCAT 1 cut(s) 208
MroXI GAANNNNTTC 2 cut(s) 456, 588
MseI TTAA 9 cut(s) 315, 435, 507, 666, 767, 863, 1001, 1034, 1090
MslI CAYNNNNRTG 2 cut(s) 718, 956
MspA1I CMGCKG 1 cut(s) 752
MspI CCGG 1 cut(s) 934
MspR9I CCNGG 2 cut(s) 855, 1024
Mva1269I GAATGC 1 cut(s) 1070
MvaI CCWGG 2 cut(s) 855, 1024
MwoI GCNNNNNNNGC 1 cut(s) 943
NdeI CATATG 1 cut(s) 334
NdeII GATC 1 cut(s) 229
NlaIII CATG 5 cut(s) 103, 392, 723, 929, 1016
NlaIV GGNNCC 4 cut(s) 372, 419, 1020, 1021
NmuCI GTSAC 1 cut(s) 677
NsiI ATGCAT 1 cut(s) 208
NspI RCATGY 3 cut(s) 392, 723, 929
PagI TCATGA 1 cut(s) 1012
PciSI GCTCTTC 1 cut(s) 936
PctI GAATGC 1 cut(s) 1070
PdmI GAANNNNTTC 2 cut(s) 456, 588
PfeI GAWTC 3 cut(s) 94, 301, 969
PkrI GCNGC 2 cut(s) 568, 751
PleI GAGTC 1 cut(s) 303
PpsI GAGTC 1 cut(s) 303
PshBI ATTAAT 1 cut(s) 1001
Psp6I CCWGG 2 cut(s) 853, 1022
PspGI CCWGG 2 cut(s) 853, 1022
PspN4I GGNNCC 4 cut(s) 372, 419, 1020, 1021
PspOMI GGGCCC 2 cut(s) 370, 1018
PspPI GGNCC 7 cut(s) 155, 257, 370, 371, 531, 1018, 1019
PsrI GAACNNNNNNTAC 2 cut(s) 160, 192
PsuI RGATCY 1 cut(s) 229
PvuII CAGCTG 1 cut(s) 752
RsaI GTAC 8 cut(s) 120, 213, 381, 393, 441, 686, 711, 1065
RsaNI GTAC 8 cut(s) 119, 212, 380, 392, 440, 685, 710, 1064
RseI CAYNNNNRTG 2 cut(s) 718, 956
SapI GCTCTTC 1 cut(s) 936
SaqAI TTAA 9 cut(s) 315, 435, 507, 666, 767, 863, 1001, 1034, 1090
SatI GCNGC 2 cut(s) 567, 750
Sau3AI GATC 1 cut(s) 229
Sau96I GGNCC 7 cut(s) 155, 257, 370, 371, 531, 1018, 1019
SchI GAGTC 1 cut(s) 304
ScrFI CCNGG 2 cut(s) 855, 1024
SduI GDGCHC 3 cut(s) 374, 933, 1022
SfaNI GCATC 4 cut(s) 70, 178, 215, 811
SfcI CTRYAG 1 cut(s) 282
SinI GGWCC 2 cut(s) 155, 257
SmiMI CAYNNNNRTG 2 cut(s) 718, 956
Sse9I AATT 7 cut(s) 159, 311, 624, 784, 896, 998, 1002
SsiI CCGC 1 cut(s) 191
SspMI CTAG 4 cut(s) 543, 602, 915, 938
StyD4I CCNGG 2 cut(s) 853, 1022
StyI CCWWGG 1 cut(s) 421
TaaI ACNGT 2 cut(s) 223, 912
TaqI TCGA 2 cut(s) 512, 742
TasI AATT 7 cut(s) 159, 311, 624, 784, 896, 998, 1002
TatI WGTACW 4 cut(s) 118, 211, 391, 684
TfiI GAWTC 3 cut(s) 94, 301, 969
Tru1I TTAA 9 cut(s) 315, 435, 507, 666, 767, 863, 1001, 1034, 1090
Tru9I TTAA 9 cut(s) 315, 435, 507, 666, 767, 863, 1001, 1034, 1090
TscAI CASTG 1 cut(s) 958
TseFI GTSAC 1 cut(s) 677
TseI GCWGC 2 cut(s) 566, 749
Tsp45I GTSAC 1 cut(s) 677
TspDTI ATGAA 2 cut(s) 284, 495
TspRI CASTG 1 cut(s) 958
VpaK11BI GGWCC 2 cut(s) 155, 257
VspI ATTAAT 1 cut(s) 1001
XbaI TCTAGA 1 cut(s) 542
XceI RCATGY 3 cut(s) 392, 723, 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1001
XmnI GAANNNNTTC 2 cut(s) 456, 588
XspI CTAG 4 cut(s) 543, 602, 915, 938
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.