Rh7AG348200

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000089
Physical Location & Seq
Forward (+)
44213112 .. 44220435
7324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG348200.1

Sequence Viewer

Length: 1887 bp
ATGGTGAGTGATATTACAAAGGCAGGTCGCAGTAAGAGGAAGCATACTAAGGAAACCGGTGGAATATCACAAGACTTTGATGCAAGGGATGTGAATCACATGGCAGGTCTCCAAGAAGTACATACACAAGTTAGTAAAGAAGCTACCCAAGATGGACCAATTCCAAGTAATGATAGTTCTGAACAAGCTGCGGTCCAAGAAAATGCATCTGTACAAGATACAGTTGAAGATCCAAGAGGATTGAAAAAGAAAAGAGGTCCAACCAAAATGAAGAAAGTTGCTATGGACCCTGAGAGTCGGATTCAAGTTCAATTTAATAGCTTGGGCGAACCATATGGAGAGGGGTCAGTAAGCTTGTCATCTTTTTTGGGCCCTCTTGTACGAGAGCATGTACCTGTAACACTTGATGATTGGAGGAACCTTGGTGATGACCTTAAAGTACCATTAAGGGAAGAAGTTCAGGCAAGATACATCTTGGATGAAGAATGGCAAAAAGATGTCATATTTAAGTCGATGGGATGCCTTTGGAGGGCCTCAAAATCTAGATTAGTTCGTCAAATACAAGCAGCAAAGAACAAACAAGAAAGACTTCTGCTCAAACCAGACAACATACCAACTTTAGCAATTTGGAAGAAGTTTGTCAAGACAAAAACAAGTCCAACATTTAAGGCTATAAGTGACAAGTACAAGGCATTGAGGCGTAAACAAGTACCACACACATGCAGTCGCAAGGGAATGGTTCGATTAGCAGCTGATATGAAAAGAGATAGTGCCAACCCATCTTCAGTGTCAAGGGTTAAAGTTTGGATCAAATCTCGCACAAAAAAAGATGGTACACCTGTGAATACAGCAGTTGGTGAAACTATTGAGAAGTTAAGAGAAGTTGAAAGTAATTCACCCTCATCCTCAACAACTAATGTGAGAGAAGATGCTTTTTCCCAAGTATTAGGACAAGATAAACCTGGACGATTAAGAGGAATGGGAAGAGGAGTTACTATAAGCAAATTAGCCTTCTTACAGTCTAGGGACAAGCATGTGCTCCAGCTAGAAGAGCAACACACTGATATGCGAAGTAGAATCAAGCATTTGGAGAGCTTAGTCCATAAATTAATTGGACATCATGAGACAATGCAAAATGAGGAAGATAAAAATGAGCAAAATGGGTCTCAAGTTGACAAGACTTCTCCAGTGAGTATGAGCCCCAAATCTCTAGACAAGTGCAAGCTTTTAGATTGGTGTGGAATGGATGAGATTGTAGCCGAAGGACGTTGGTGTTCCAGTGATCCGAATGAGCTTGTCAATCATACTCCTCTTGGACCTAATGCAATGAAAGTGAGGGTAGATATTCCAAACAAACCAGAAGCTTTTCTTTGGAGGCCTACACCTAATATGAGTTGTATGGAACAAGCTCAAGGTAAGACAATAGCGTGGCCAGCTGATAAAGTGGTCTTGCAAATCAGTCAGCAATCTGAGAATGAAGATAATATATCTATGCCTTCGAGTAAAAACATGAATTCTATCAAGTGCAAGTTGTTCAATTGGAGTGGAAAAGAGGAAATAGTTGCTGAAGGTCGCTGGTTCTCTAATGATCCAAAGATGCTTGTTAATGATATTCCTCTCGGACCTAATGCCATGATAGTTTGGGTTGATATCCCAACATGTCCTGAAGCATTTTTATGGAGACCTACGCCTAACATGACATATATTGAAGATGCTATTGGCACTAAAGTAGCATGGCCTCCTAACAAAGTTGTTTTGGAAAATAGTCCAAACATTGAGGAAGTTGGAAACCTATCATCTCCTTCGTTGGATTATCTACAAAGAATTTCTCTAAAGATGCTCACTATGGAGACCAAGTCTCAGAACACAATGGCCAATTCTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

628

Amino Acids

70.59

Weight (kDa)

8.97

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 209 - 332 7e-23 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1885
Acc36I ACCTGC 2 cut(s) 14, 95
AciI CCGC 1 cut(s) 191
AclWI GGATC 4 cut(s) 224, 815, 1277, 1583
AcoI YGGCCR 2 cut(s) 1430, 1872
AcsI RAATTY 2 cut(s) 1513, 1824
AcuI CTGAAG 3 cut(s) 768, 1587, 1686
AfaI GTAC 8 cut(s) 120, 213, 381, 393, 441, 686, 711, 835
AfiI CCNNNNNNNGG 1 cut(s) 529
AflIII ACRYGT 1 cut(s) 1658
AgeI ACCGGT 1 cut(s) 56
AgsI TTSAA 7 cut(s) 227, 244, 305, 311, 887, 1537, 1709
AjnI CCWGG 1 cut(s) 961
AjuI GAANNNNNNNTTGG 2 cut(s) 1701, 1733
Alw21I GWGCWC 1 cut(s) 1041
Alw26I GTCTC 6 cut(s) 113, 1118, 1170, 1675, 1844, 1863
AlwI GGATC 4 cut(s) 224, 815, 1277, 1583
AoxI GGCC 6 cut(s) 370, 531, 1376, 1430, 1736, 1872
ApaI GGGCCC 1 cut(s) 374
ApeKI GCWGC 3 cut(s) 188, 566, 749
ApoI RAATTY 2 cut(s) 1513, 1824
AseI ATTAAT 1 cut(s) 1109
AsiGI ACCGGT 1 cut(s) 56
Asp700I GAANNNNTTC 3 cut(s) 456, 588, 1365
AspS9I GGNCC 9 cut(s) 155, 193, 257, 286, 370, 371, 531, 1316, 1622
AsuHPI GGTGA 4 cut(s) 16, 437, 869, 888
AvaII GGWCC 6 cut(s) 155, 193, 257, 286, 1316, 1622
BaeGI GKGCMC 1 cut(s) 374
BaeI ACNNNNGTAYC 2 cut(s) 825, 858
BalI TGGCCA 2 cut(s) 1432, 1874
BanII GRGCYC 2 cut(s) 374, 1202
BarI GAAGNNNNNNTAC 2 cut(s) 976, 1008
Bbv12I GWGCWC 1 cut(s) 1041
BbvI GCAGC 3 cut(s) 175, 578, 761
BccI CCATC 4 cut(s) 146, 508, 787, 824
BciT130I CCWGG 1 cut(s) 963
BcoDI GTCTC 6 cut(s) 113, 1118, 1170, 1675, 1844, 1863
BfaI CTAG 4 cut(s) 543, 1023, 1046, 1211
BfuAI ACCTGC 2 cut(s) 14, 95
BisI GCNGC 3 cut(s) 189, 567, 750
BlsI GCNGC 3 cut(s) 190, 568, 751
Bme1390I CCNGG 1 cut(s) 963
Bme18I GGWCC 6 cut(s) 155, 193, 257, 286, 1316, 1622
BmgT120I GGNCC 9 cut(s) 155, 193, 257, 286, 370, 371, 531, 1316, 1622
BmiI GGNNCC 3 cut(s) 288, 372, 419
BmrFI CCNGG 1 cut(s) 963
BmsI GCATC 7 cut(s) 70, 215, 509, 919, 1587, 1702, 1827
BpmI CTGGAG 2 cut(s) 1025, 1170
BpuEI CTTGAG 2 cut(s) 1152, 1395
BsaBI GATNNNNATC 1 cut(s) 93
BsaI GGTCTC 4 cut(s) 113, 1170, 1675, 1844
BsaJI CCNNGG 1 cut(s) 421
BsaWI WCCGGW 1 cut(s) 56
BsaXI ACNNNNNCTCC 2 cut(s) 1841, 1871
Bsc4I CCNNNNNNNGG 1 cut(s) 529
Bse118I RCCGGY 1 cut(s) 56
Bse1I ACTGG 2 cut(s) 1187, 1278
Bse3DI GCAATG 1 cut(s) 1332
Bse8I GATNNNNATC 1 cut(s) 93
BseBI CCWGG 1 cut(s) 963
BseDI CCNNGG 1 cut(s) 421
BseGI GGATG 5 cut(s) 94, 484, 524, 902, 1252
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 529
BseMI GCAATG 1 cut(s) 1332
BseMII CTCAG 3 cut(s) 282, 1461, 1874
BseNI ACTGG 2 cut(s) 1187, 1278
BseRI GAGGAG 2 cut(s) 1002, 1299
BseSI GKGCMC 1 cut(s) 374
BseXI GCAGC 3 cut(s) 175, 578, 761
BshFI GGCC 6 cut(s) 372, 533, 1378, 1432, 1738, 1874
BshTI ACCGGT 1 cut(s) 56
BsiHKAI GWGCWC 1 cut(s) 1041
BsiSI CCGG 1 cut(s) 57
BslFI GGGAC 1 cut(s) 1040
BslI CCNNNNNNNGG 1 cut(s) 529
BsmAI GTCTC 6 cut(s) 113, 1118, 1170, 1675, 1844, 1863
BsmFI GGGAC 1 cut(s) 1040
BsnI GGCC 6 cut(s) 372, 533, 1378, 1432, 1738, 1874
Bso31I GGTCTC 4 cut(s) 113, 1170, 1675, 1844
Bsp120I GGGCCC 1 cut(s) 370
Bsp1286I GDGCHC 3 cut(s) 374, 1041, 1202
Bsp1407I TGTACA 1 cut(s) 211
Bsp143I GATC 4 cut(s) 229, 807, 1282, 1588
BspACI CCGC 1 cut(s) 191
BspANI GGCC 6 cut(s) 372, 533, 1378, 1432, 1738, 1874
BspCNI CTCAG 3 cut(s) 283, 1462, 1873
BspHI TCATGA 1 cut(s) 1120
BspLI GGNNCC 3 cut(s) 288, 372, 419
BspMI ACCTGC 2 cut(s) 14, 95
BspPI GGATC 4 cut(s) 224, 815, 1277, 1583
BspQI GCTCTTC 1 cut(s) 1044
BspTNI GGTCTC 4 cut(s) 113, 1170, 1675, 1844
BsrDI GCAATG 1 cut(s) 1332
BsrFI RCCGGY 1 cut(s) 56
BsrGI TGTACA 1 cut(s) 211
BsrI ACTGG 2 cut(s) 1187, 1278
BssAI RCCGGY 1 cut(s) 56
BssECI CCNNGG 1 cut(s) 421
BssMI GATC 4 cut(s) 229, 807, 1282, 1588
BssT1I CCWWGG 1 cut(s) 421
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 2 cut(s) 223, 1020
Bst6I CTCTTC 2 cut(s) 979, 1044
BstAUI TGTACA 1 cut(s) 211
BstC8I GCNNGC 2 cut(s) 1223, 1434
BstDEI CTNAG 5 cut(s) 48, 291, 1096, 1470, 1860
BstF5I GGATG 5 cut(s) 94, 484, 524, 902, 1252
BstKTI GATC 4 cut(s) 232, 810, 1285, 1591
BstMAI GTCTC 6 cut(s) 113, 1118, 1170, 1675, 1844, 1863
BstMBI GATC 4 cut(s) 229, 807, 1282, 1588
BstMWI GCNNNNNNNGC 2 cut(s) 1051, 1433
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 4 cut(s) 392, 723, 1037, 1662
BstSCI CCNGG 1 cut(s) 961
BstSLI GKGCMC 1 cut(s) 374
BstV1I GCAGC 3 cut(s) 175, 578, 761
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BsuRI GGCC 6 cut(s) 372, 533, 1378, 1432, 1738, 1874
BtsCI GGATG 5 cut(s) 94, 484, 524, 902, 1252
BtsIMutI CAGTG 4 cut(s) 792, 1059, 1194, 1285
BveI ACCTGC 2 cut(s) 14, 95
Cac8I GCNNGC 2 cut(s) 1223, 1434
CciI TCATGA 1 cut(s) 1120
Cfr10I RCCGGY 1 cut(s) 56
Cfr13I GGNCC 9 cut(s) 155, 193, 257, 286, 370, 371, 531, 1316, 1622
Csp6I GTAC 8 cut(s) 119, 212, 380, 392, 440, 685, 710, 834
CspAI ACCGGT 1 cut(s) 56
CspCI CAANNNNNGTGG 2 cut(s) 1525, 1560
CviQI GTAC 8 cut(s) 119, 212, 380, 392, 440, 685, 710, 834
DdeI CTNAG 5 cut(s) 48, 291, 1096, 1470, 1860
DpnI GATC 4 cut(s) 231, 809, 1284, 1590
DpnII GATC 4 cut(s) 229, 807, 1282, 1588
EaeI YGGCCR 2 cut(s) 1430, 1872
Eam1104I CTCTTC 2 cut(s) 979, 1044
EarI CTCTTC 2 cut(s) 979, 1044
Eco130I CCWWGG 1 cut(s) 421
Eco147I AGGCCT 1 cut(s) 1378
Eco24I GRGCYC 2 cut(s) 374, 1202
Eco31I GGTCTC 4 cut(s) 113, 1170, 1675, 1844
Eco32I GATATC 1 cut(s) 1651
Eco47I GGWCC 6 cut(s) 155, 193, 257, 286, 1316, 1622
Eco57I CTGAAG 3 cut(s) 768, 1587, 1686
EcoO109I RGGNCCY 2 cut(s) 371, 531
EcoRI GAATTC 1 cut(s) 1513
EcoRII CCWGG 1 cut(s) 961
EcoRV GATATC 1 cut(s) 1651
EcoT14I CCWWGG 1 cut(s) 421
EcoT22I ATGCAT 1 cut(s) 208
EcoT38I GRGCYC 2 cut(s) 374, 1202
ErhI CCWWGG 1 cut(s) 421
FalI AAGNNNNNCTT 4 cut(s) 573, 605, 1353, 1385
FaqI GGGAC 1 cut(s) 1040
FauNDI CATATG 1 cut(s) 334
Fnu4HI GCNGC 3 cut(s) 189, 567, 750
FokI GGATG 5 cut(s) 101, 491, 531, 889, 1259
FriOI GRGCYC 2 cut(s) 374, 1202
Fsp4HI GCNGC 3 cut(s) 189, 567, 750
FspBI CTAG 4 cut(s) 543, 1023, 1046, 1211
GluI GCNGC 3 cut(s) 189, 567, 750
GsuI CTGGAG 2 cut(s) 1025, 1170
HaeIII GGCC 6 cut(s) 372, 533, 1378, 1432, 1738, 1874
HapII CCGG 1 cut(s) 57
HincII GTYRAC 1 cut(s) 1174
HindII GTYRAC 1 cut(s) 1174
HindIII AAGCTT 3 cut(s) 352, 1223, 1362
HinfI GANTC 4 cut(s) 94, 295, 301, 1077
HpaII CCGG 1 cut(s) 57
HphI GGTGA 4 cut(s) 16, 437, 869, 888
Hpy166II GTNNAC 3 cut(s) 704, 836, 1174
Hpy188I TCNGA 6 cut(s) 181, 300, 1287, 1471, 1622, 1863
Hpy188III TCNNGA 5 cut(s) 543, 643, 1121, 1211, 1664
Hpy8I GTNNAC 3 cut(s) 704, 836, 1174
HpyAV CCTTC 5 cut(s) 1021, 1256, 1506, 1562, 1812
HpyCH4III ACNGT 2 cut(s) 223, 1020
HpyCH4IV ACGT 1 cut(s) 1267
HpyCH4V TGCA 8 cut(s) 83, 206, 723, 1132, 1221, 1325, 1453, 1527
HpyF10VI GCNNNNNNNGC 2 cut(s) 1051, 1433
HpyF3I CTNAG 5 cut(s) 48, 291, 1096, 1470, 1860
HpySE526I ACGT 1 cut(s) 1267
Kzo9I GATC 4 cut(s) 229, 807, 1282, 1588
LguI GCTCTTC 1 cut(s) 1044
LmnI GCTCC 1 cut(s) 1044
Lsp1109I GCAGC 3 cut(s) 175, 578, 761
LweI GCATC 7 cut(s) 70, 215, 509, 919, 1587, 1702, 1827
MaeI CTAG 4 cut(s) 543, 1023, 1046, 1211
MaeII ACGT 1 cut(s) 1267
MaeIII GTNAC 3 cut(s) 397, 677, 991
MalI GATC 4 cut(s) 231, 809, 1284, 1590
MboI GATC 4 cut(s) 229, 807, 1282, 1588
MfeI CAATTG 1 cut(s) 1537
MflI RGATCY 1 cut(s) 229
MhlI GDGCHC 3 cut(s) 374, 1041, 1202
MlsI TGGCCA 2 cut(s) 1432, 1874
MluNI TGGCCA 2 cut(s) 1432, 1874
MlyI GAGTC 1 cut(s) 304
MmeI TCCRAC 5 cut(s) 278, 284, 683, 1765, 1788
Mox20I TGGCCA 2 cut(s) 1432, 1874
Mph1103I ATGCAT 1 cut(s) 208
MroXI GAANNNNTTC 3 cut(s) 456, 588, 1365
MscI TGGCCA 2 cut(s) 1432, 1874
MslI CAYNNNNRTG 3 cut(s) 718, 1064, 1675
Msp20I TGGCCA 2 cut(s) 1432, 1874
MspA1I CMGCKG 2 cut(s) 752, 1436
MspI CCGG 1 cut(s) 57
MspR9I CCNGG 1 cut(s) 963
MunI CAATTG 1 cut(s) 1537
MvaI CCWGG 1 cut(s) 963
MwoI GCNNNNNNNGC 2 cut(s) 1051, 1433
NdeI CATATG 1 cut(s) 334
NdeII GATC 4 cut(s) 229, 807, 1282, 1588
NlaIV GGNNCC 3 cut(s) 288, 372, 419
NmuCI GTSAC 1 cut(s) 677
NsiI ATGCAT 1 cut(s) 208
NspI RCATGY 4 cut(s) 392, 723, 1037, 1662
PagI TCATGA 1 cut(s) 1120
PceI AGGCCT 1 cut(s) 1378
PciI ACATGT 1 cut(s) 1658
PciSI GCTCTTC 1 cut(s) 1044
PdmI GAANNNNTTC 3 cut(s) 456, 588, 1365
PfeI GAWTC 3 cut(s) 94, 301, 1077
PflFI GACNNNGTC 1 cut(s) 1855
PinAI ACCGGT 1 cut(s) 56
PkrI GCNGC 3 cut(s) 190, 568, 751
PleI GAGTC 1 cut(s) 303
PpsI GAGTC 1 cut(s) 303
PscI ACATGT 1 cut(s) 1658
PshBI ATTAAT 1 cut(s) 1109
PsiI TTATAA 1 cut(s) 1885
Psp6I CCWGG 1 cut(s) 961
PspGI CCWGG 1 cut(s) 961
PspN4I GGNNCC 3 cut(s) 288, 372, 419
PspOMI GGGCCC 1 cut(s) 370
PspPI GGNCC 9 cut(s) 155, 193, 257, 286, 370, 371, 531, 1316, 1622
PsrI GAACNNNNNNTAC 2 cut(s) 160, 192
PsuI RGATCY 1 cut(s) 229
PsyI GACNNNGTC 1 cut(s) 1855
PvuII CAGCTG 2 cut(s) 752, 1436
RsaI GTAC 8 cut(s) 120, 213, 381, 393, 441, 686, 711, 835
RsaNI GTAC 8 cut(s) 119, 212, 380, 392, 440, 685, 710, 834
RseI CAYNNNNRTG 3 cut(s) 718, 1064, 1675
SapI GCTCTTC 1 cut(s) 1044
SatI GCNGC 3 cut(s) 189, 567, 750
Sau3AI GATC 4 cut(s) 229, 807, 1282, 1588
Sau96I GGNCC 9 cut(s) 155, 193, 257, 286, 370, 371, 531, 1316, 1622
SchI GAGTC 1 cut(s) 304
ScrFI CCNGG 1 cut(s) 963
SduI GDGCHC 3 cut(s) 374, 1041, 1202
SfaNI GCATC 7 cut(s) 70, 215, 509, 919, 1587, 1702, 1827
SinI GGWCC 6 cut(s) 155, 193, 257, 286, 1316, 1622
SmiMI CAYNNNNRTG 3 cut(s) 718, 1064, 1675
SmlI CTYRAG 2 cut(s) 1167, 1410
SmoI CTYRAG 2 cut(s) 1167, 1410
SseBI AGGCCT 1 cut(s) 1378
SsiI CCGC 1 cut(s) 191
SspMI CTAG 4 cut(s) 543, 1023, 1046, 1211
StuI AGGCCT 1 cut(s) 1378
StyD4I CCNGG 1 cut(s) 961
StyI CCWWGG 1 cut(s) 421
TaaI ACNGT 2 cut(s) 223, 1020
TaiI ACGT 1 cut(s) 1270
TaqI TCGA 3 cut(s) 512, 742, 1499
TatI WGTACW 3 cut(s) 118, 211, 684
TfiI GAWTC 3 cut(s) 94, 301, 1077
TscAI CASTG 4 cut(s) 792, 1066, 1194, 1285
TseFI GTSAC 1 cut(s) 677
TseI GCWGC 3 cut(s) 188, 566, 749
Tsp45I GTSAC 1 cut(s) 677
TspDTI ATGAA 6 cut(s) 284, 495, 773, 1343, 1491, 1526
TspRI CASTG 4 cut(s) 792, 1066, 1194, 1285
Tth111I GACNNNGTC 1 cut(s) 1855
VpaK11BI GGWCC 6 cut(s) 155, 193, 257, 286, 1316, 1622
VspI ATTAAT 1 cut(s) 1109
XapI RAATTY 2 cut(s) 1513, 1824
XbaI TCTAGA 2 cut(s) 542, 1210
XceI RCATGY 4 cut(s) 392, 723, 1037, 1662
XcmI CCANNNNNNNNNTGG 1 cut(s) 1109
XmnI GAANNNNTTC 3 cut(s) 456, 588, 1365
XspI CTAG 4 cut(s) 543, 1023, 1046, 1211
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.