FvH4_2g07142

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000089
Physical Location & Seq
Reverse (-)
5911269 .. 5913400
2132 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g07142.t1

Sequence Viewer

Length: 1248 bp
ATGACAATAGGGAGGAAAAGAGGTAGAGTAGAAGGGCCTGAATTGGATGCACCAATTGCAGAAGCTGGTAATTTTCAACAAGAAGTTCAACCTGAGGTTCCTGAGGCTACTCCTGATGCTGTCAAAGGGAAAACAAGAGGAAAGACTACCTTACAAGTCATTCCTACTGGAGAATTAAATCGTCAAACGCTTGAGTGGAATGAAAGAGGACAACCTGTGGGAGAATTATCAGTAAGATTTAGCTCAACTGTTAGGGTTATAGTAAGAGAGCAGGTGTCAATCAACATAGATGATTGGCGTAACGTTGAAGATAAGATAAAAAATGAAGCTTGGGGTATTTTGCTGCAAAAGTACAAGCTGGATCTGATTCACAAGACATTCATCTTGCAACAAATGGGAAGACTATGGAGAGCTTACAAATCTGAACTCTCAAGCAGCATTATGAGTGTCTTAGATTCTCAACGCAACAAGACAGAATGCGCAAGGCTTCTCAACTTACTTAGACCTGATGATGTGCCTCAGAAAGAGTGGGATACATTCGTGGCACAACATAGTTCAGAGGCATGGAGGGCTGAGATGGAAGCTAAACTTGCTGAGCAACCTCCTAATGAAGGGCCTGTTCCTGTAAAGTATGATGTGTTGAGTCAAGTTCTTGGTAAGGAGAAAAATGGTCGTGTTAGAGGCCTGGGAGCAGGTGTTACACCTTCAAGGGTAGATGCTCAGCTGCAAAGTAGCTCTTGGAAACAAGATGTTGAGGAGAAACTTAAGGCGTACTCTGAGCGGACAAAGATTCTTGAAGACATAATTTTTGAATTAAGGGGAAATGCTTCTACTACTGGTGGAAGTGGACATGCTGGTTGTAGTATTGGTGGAAGTAAGCGCACAAACAGCCCTGATATAGCACAAGATAGATATGAAAATGGTGAAAAAAGATTGAATCCTAGCCCTATGACAGCAAACTCAAAGTCAGTACAAGAGAGCACTCTGCTTGGTATTAATCAGCTCTACAACATACTCAGCTGGGAGGGCACTGATGAAGTTGTGGCTAAAGGGAGAATCTCTGCAACTGACCCAGCAACCAAAGTGCATGGCTATAAGCTTGGACCTGATTGTTACAGAGTCGAGATTGAGGAGGCTGTCAATCCAAGAGCTGAGTTCTTTCGTTTTCAGCCAGAATTTTCTACCATGGAAGATGCAGTTGGAAGCACCATTGCTTGGCCAATTAAGTACATTGTCCCTCGCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

416

Amino Acids

46.43

Weight (kDa)

6.24

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8039 PF26133 340 - 412 7.8e-09 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 262, 683
Acc16I TGCGCA 1 cut(s) 481
Acc36I ACCTGC 2 cut(s) 262, 683
AccB7I CCANNNNNTGG 1 cut(s) 1215
AccBSI CCGCTC 1 cut(s) 781
AciI CCGC 1 cut(s) 781
AclI AACGTT 1 cut(s) 303
AclWI GGATC 1 cut(s) 369
AcoI YGGCCR 1 cut(s) 1217
AcsI RAATTY 1 cut(s) 1175
AfaI GTAC 4 cut(s) 353, 773, 972, 1229
AfiI CCNNNNNNNGG 2 cut(s) 611, 1215
AflII CTTAAG 1 cut(s) 764
AgsI TTSAA 7 cut(s) 77, 89, 308, 708, 797, 812, 937
AjnI CCWGG 1 cut(s) 684
AjuI GAANNNNNNNTTGG 2 cut(s) 1182, 1214
Alw21I GWGCWC 1 cut(s) 983
AlwI GGATC 1 cut(s) 369
AlwNI CAGNNNCTG 1 cut(s) 65
AoxI GGCC 4 cut(s) 35, 614, 682, 1217
ApeKI GCWGC 3 cut(s) 343, 435, 724
ApoI RAATTY 1 cut(s) 1175
ArsI GACNNNNNNTTYG 4 cut(s) 791, 823, 950, 982
AseI ATTAAT 1 cut(s) 996
Asp700I GAANNNNTTC 1 cut(s) 826
AspLEI GCGC 2 cut(s) 482, 882
AspS9I GGNCC 3 cut(s) 35, 614, 1103
AsuHPI GGTGA 1 cut(s) 935
AvaII GGWCC 1 cut(s) 1103
AxyI CCTNAGG 2 cut(s) 93, 102
BaeGI GKGCMC 1 cut(s) 1031
BaeI ACNNNNGTAYC 2 cut(s) 525, 558
BalI TGGCCA 1 cut(s) 1219
BbsI GAAGAC 2 cut(s) 406, 804
Bbv12I GWGCWC 1 cut(s) 983
BbvI GCAGC 3 cut(s) 330, 447, 711
BccI CCATC 1 cut(s) 571
BciT130I CCWGG 1 cut(s) 686
BciVI GTATCC 1 cut(s) 526
BfaI CTAG 1 cut(s) 942
BfrI CTTAAG 1 cut(s) 764
BfuAI ACCTGC 2 cut(s) 262, 683
BfuI GTATCC 1 cut(s) 526
BisI GCNGC 3 cut(s) 344, 436, 725
BlpI GCTNAGC 2 cut(s) 594, 720
BlsI GCNGC 3 cut(s) 345, 437, 726
Bme1390I CCNGG 1 cut(s) 686
Bme18I GGWCC 1 cut(s) 1103
BmgT120I GGNCC 3 cut(s) 35, 614, 1103
BmiI GGNNCC 1 cut(s) 99
BmrFI CCNGG 1 cut(s) 686
BmsI GCATC 4 cut(s) 37, 106, 706, 1183
BpiI GAAGAC 2 cut(s) 406, 804
BpmI CTGGAG 1 cut(s) 189
Bpu1102I GCTNAGC 2 cut(s) 594, 720
BpuEI CTTGAG 2 cut(s) 212, 415
BsaJI CCNNGG 2 cut(s) 685, 1185
BsaXI ACNNNNNCTCC 2 cut(s) 681, 711
Bsc4I CCNNNNNNNGG 2 cut(s) 611, 1215
Bse1I ACTGG 2 cut(s) 172, 841
Bse21I CCTNAGG 2 cut(s) 93, 102
Bse3DI GCAATG 1 cut(s) 1209
BseBI CCWGG 1 cut(s) 686
BseDI CCNNGG 2 cut(s) 685, 1185
BseGI GGATG 1 cut(s) 52
BseLI CCNNNNNNNGG 2 cut(s) 611, 1215
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 9 cut(s) 84, 93, 533, 564, 585, 734, 768, 1030, 1143
BseNI ACTGG 2 cut(s) 172, 841
BseRI GAGGAG 2 cut(s) 770, 1145
BseSI GKGCMC 1 cut(s) 1031
BseXI GCAGC 3 cut(s) 330, 447, 711
BseYI CCCAGC 2 cut(s) 1020, 1072
BshFI GGCC 4 cut(s) 37, 616, 684, 1219
BsiHKAI GWGCWC 1 cut(s) 983
BslFI GGGAC 1 cut(s) 1220
BslI CCNNNNNNNGG 2 cut(s) 611, 1215
BsmFI GGGAC 1 cut(s) 1220
BsmI GAATGC 1 cut(s) 482
BsnI GGCC 4 cut(s) 37, 616, 684, 1219
Bsp1286I GDGCHC 2 cut(s) 983, 1031
Bsp143I GATC 1 cut(s) 361
Bsp1720I GCTNAGC 2 cut(s) 594, 720
Bsp19I CCATGG 1 cut(s) 1185
BspACI CCGC 1 cut(s) 781
BspANI GGCC 4 cut(s) 37, 616, 684, 1219
BspCNI CTCAG 9 cut(s) 85, 94, 532, 565, 586, 733, 769, 1029, 1144
BspLI GGNNCC 1 cut(s) 99
BspMI ACCTGC 2 cut(s) 262, 683
BspPI GGATC 1 cut(s) 369
BspTI CTTAAG 1 cut(s) 764
BsrBI CCGCTC 1 cut(s) 781
BsrDI GCAATG 1 cut(s) 1209
BsrI ACTGG 2 cut(s) 172, 841
BssECI CCNNGG 2 cut(s) 685, 1185
BssMI GATC 1 cut(s) 361
BssT1I CCWWGG 1 cut(s) 1185
Bst2UI CCWGG 1 cut(s) 686
Bst4CI ACNGT 1 cut(s) 250
BstAFI CTTAAG 1 cut(s) 764
BstAPI GCANNNNNTGC 1 cut(s) 56
BstDSI CCRYGG 1 cut(s) 1185
BstENI CCTNNNNNAGG 1 cut(s) 609
BstF5I GGATG 1 cut(s) 52
BstHHI GCGC 2 cut(s) 482, 882
BstKTI GATC 1 cut(s) 364
BstMBI GATC 1 cut(s) 361
BstMWI GCNNNNNNNGC 5 cut(s) 56, 569, 590, 888, 1026
BstNI CCWGG 1 cut(s) 686
BstNSI RCATGY 1 cut(s) 854
BstSCI CCNGG 1 cut(s) 684
BstSLI GKGCMC 1 cut(s) 1031
BstV1I GCAGC 3 cut(s) 330, 447, 711
BstV2I GAAGAC 2 cut(s) 406, 804
BstX2I RGATCY 1 cut(s) 361
BstYI RGATCY 1 cut(s) 361
Bsu36I CCTNAGG 2 cut(s) 93, 102
BsuI GTATCC 1 cut(s) 526
BsuRI GGCC 4 cut(s) 37, 616, 684, 1219
BtgI CCRYGG 1 cut(s) 1185
BtsCI GGATG 1 cut(s) 52
BtsIMutI CAGTG 1 cut(s) 1029
BveI ACCTGC 2 cut(s) 262, 683
CaiI CAGNNNCTG 1 cut(s) 65
CfoI GCGC 2 cut(s) 482, 882
Cfr13I GGNCC 3 cut(s) 35, 614, 1103
Csp6I GTAC 4 cut(s) 352, 772, 971, 1228
CviAII CATG 4 cut(s) 564, 851, 1088, 1186
CviQI GTAC 4 cut(s) 352, 772, 971, 1228
DpnI GATC 1 cut(s) 363
DpnII GATC 1 cut(s) 361
EaeI YGGCCR 1 cut(s) 1217
Eco130I CCWWGG 1 cut(s) 1185
Eco147I AGGCCT 1 cut(s) 684
Eco47I GGWCC 1 cut(s) 1103
Eco81I CCTNAGG 2 cut(s) 93, 102
EcoNI CCTNNNNNAGG 1 cut(s) 609
EcoO109I RGGNCCY 2 cut(s) 35, 614
EcoRII CCWGG 1 cut(s) 684
EcoT14I CCWWGG 1 cut(s) 1185
ErhI CCWWGG 1 cut(s) 1185
FaeI CATG 4 cut(s) 567, 854, 1091, 1189
FalI AAGNNNNNCTT 6 cut(s) 134, 166, 573, 605, 721, 753
FaqI GGGAC 1 cut(s) 1220
FatI CATG 4 cut(s) 563, 850, 1087, 1185
Fnu4HI GCNGC 3 cut(s) 344, 436, 725
FokI GGATG 1 cut(s) 59
Fsp4HI GCNGC 3 cut(s) 344, 436, 725
FspBI CTAG 1 cut(s) 942
FspI TGCGCA 1 cut(s) 481
GlaI GCGC 2 cut(s) 481, 881
GluI GCNGC 3 cut(s) 344, 436, 725
GsaI CCCAGC 2 cut(s) 1024, 1076
GsuI CTGGAG 1 cut(s) 189
HaeIII GGCC 4 cut(s) 37, 616, 684, 1219
HhaI GCGC 2 cut(s) 482, 882
Hin1II CATG 4 cut(s) 567, 854, 1091, 1189
Hin6I GCGC 2 cut(s) 480, 880
HinP1I GCGC 2 cut(s) 480, 880
HindIII AAGCTT 2 cut(s) 327, 1097
HinfI GANTC 7 cut(s) 367, 455, 643, 790, 937, 1056, 1119
HphI GGTGA 1 cut(s) 935
Hpy166II GTNNAC 1 cut(s) 848
Hpy188I TCNGA 5 cut(s) 366, 424, 522, 559, 778
Hpy188III TCNNGA 4 cut(s) 101, 113, 794, 1123
Hpy8I GTNNAC 1 cut(s) 848
HpyAV CCTTC 3 cut(s) 26, 605, 714
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4IV ACGT 1 cut(s) 303
HpyCH4V TGCA 8 cut(s) 50, 59, 346, 388, 727, 1064, 1087, 1196
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 569, 590, 888, 1026
HpySE526I ACGT 1 cut(s) 303
Hsp92II CATG 4 cut(s) 567, 854, 1091, 1189
HspAI GCGC 2 cut(s) 480, 880
Kzo9I GATC 1 cut(s) 361
LmnI GCTCC 1 cut(s) 689
Lsp1109I GCAGC 3 cut(s) 330, 447, 711
LweI GCATC 4 cut(s) 37, 106, 706, 1183
MaeI CTAG 1 cut(s) 942
MaeII ACGT 1 cut(s) 303
MaeIII GTNAC 3 cut(s) 299, 697, 1112
MalI GATC 1 cut(s) 363
MbiI CCGCTC 1 cut(s) 781
MboI GATC 1 cut(s) 361
MboII GAAGA 4 cut(s) 320, 411, 809, 1202
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 1 cut(s) 361
MhlI GDGCHC 2 cut(s) 983, 1031
MlsI TGGCCA 1 cut(s) 1219
MluCI AATT 9 cut(s) 41, 54, 70, 173, 224, 804, 812, 1175, 1221
MluNI TGGCCA 1 cut(s) 1219
MlyI GAGTC 2 cut(s) 652, 1128
MmeI TCCRAC 1 cut(s) 1180
Mox20I TGGCCA 1 cut(s) 1219
MroXI GAANNNNTTC 1 cut(s) 826
MscI TGGCCA 1 cut(s) 1219
MseI TTAA 5 cut(s) 176, 765, 815, 996, 1224
Msp20I TGGCCA 1 cut(s) 1219
MspA1I CMGCKG 2 cut(s) 724, 1020
MspCI CTTAAG 1 cut(s) 764
MspR9I CCNGG 1 cut(s) 686
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 1 cut(s) 482
MvaI CCWGG 1 cut(s) 686
MwoI GCNNNNNNNGC 5 cut(s) 56, 569, 590, 888, 1026
NcoI CCATGG 1 cut(s) 1185
NdeII GATC 1 cut(s) 361
NlaIII CATG 4 cut(s) 567, 854, 1091, 1189
NlaIV GGNNCC 1 cut(s) 99
NsbI TGCGCA 1 cut(s) 481
NspI RCATGY 1 cut(s) 854
PaqCI CACCTGC 2 cut(s) 262, 683
PceI AGGCCT 1 cut(s) 684
PctI GAATGC 1 cut(s) 482
PdmI GAANNNNTTC 1 cut(s) 826
PfeI GAWTC 5 cut(s) 367, 455, 790, 937, 1056
PflMI CCANNNNNTGG 1 cut(s) 1215
PkrI GCNGC 3 cut(s) 345, 437, 726
PleI GAGTC 2 cut(s) 651, 1127
PpsI GAGTC 2 cut(s) 651, 1127
PshBI ATTAAT 1 cut(s) 996
Psp1406I AACGTT 1 cut(s) 303
Psp6I CCWGG 1 cut(s) 684
PspFI CCCAGC 2 cut(s) 1020, 1072
PspGI CCWGG 1 cut(s) 684
PspN4I GGNNCC 1 cut(s) 99
PspPI GGNCC 3 cut(s) 35, 614, 1103
PstNI CAGNNNCTG 1 cut(s) 65
PsuI RGATCY 1 cut(s) 361
PvuII CAGCTG 2 cut(s) 724, 1020
RsaI GTAC 4 cut(s) 353, 773, 972, 1229
RsaNI GTAC 4 cut(s) 352, 772, 971, 1228
SaqAI TTAA 5 cut(s) 176, 765, 815, 996, 1224
SatI GCNGC 3 cut(s) 344, 436, 725
Sau3AI GATC 1 cut(s) 361
Sau96I GGNCC 3 cut(s) 35, 614, 1103
SchI GAGTC 2 cut(s) 652, 1128
ScrFI CCNGG 1 cut(s) 686
SduI GDGCHC 2 cut(s) 983, 1031
SfaNI GCATC 4 cut(s) 37, 106, 706, 1183
SinI GGWCC 1 cut(s) 1103
SmlI CTYRAG 3 cut(s) 191, 430, 764
SmoI CTYRAG 3 cut(s) 191, 430, 764
Sse9I AATT 9 cut(s) 41, 54, 70, 173, 224, 804, 812, 1175, 1221
SseBI AGGCCT 1 cut(s) 684
SsiI CCGC 1 cut(s) 781
SspMI CTAG 1 cut(s) 942
StuI AGGCCT 1 cut(s) 684
StyD4I CCNGG 1 cut(s) 684
StyI CCWWGG 1 cut(s) 1185
TaaI ACNGT 1 cut(s) 250
TaiI ACGT 1 cut(s) 306
TaqI TCGA 1 cut(s) 1122
TasI AATT 9 cut(s) 41, 54, 70, 173, 224, 804, 812, 1175, 1221
TatI WGTACW 3 cut(s) 351, 970, 1227
TfiI GAWTC 5 cut(s) 367, 455, 790, 937, 1056
Tru1I TTAA 5 cut(s) 176, 765, 815, 996, 1224
Tru9I TTAA 5 cut(s) 176, 765, 815, 996, 1224
TscAI CASTG 1 cut(s) 1036
TseI GCWGC 3 cut(s) 343, 435, 724
TspDTI ATGAA 6 cut(s) 216, 339, 370, 624, 930, 1050
TspRI CASTG 1 cut(s) 1036
Van91I CCANNNNNTGG 1 cut(s) 1215
Vha464I CTTAAG 1 cut(s) 764
VpaK11BI GGWCC 1 cut(s) 1103
VspI ATTAAT 1 cut(s) 996
XagI CCTNNNNNAGG 1 cut(s) 609
XapI RAATTY 1 cut(s) 1175
XceI RCATGY 1 cut(s) 854
XmnI GAANNNNTTC 1 cut(s) 826
XspI CTAG 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.