Rroxscaffold_2G00109830

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000089
Physical Location & Seq
Forward (+)
34047168 .. 34050828
3661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00109830.1

Sequence Viewer

Length: 1533 bp
ATGCGAGGGTCTTGTAGTTTGGATTGCATTGGATCTGCATATCTAATCTCAGAGGGAAGTTCAAATTCTCCTGAAGCACCTGCTAGTATAGGAACTCAAGATGCGACAAATTCAGAAATTTCAAACAGAAAACCTAGAGGTAAGGCAAAGGCATTGGACAAAGGAAAAGTAATAGAACCTGTTGAAGTCGAATTCAATGAAAGAAGTCAGCCTTACGGGAAACATGCAGCTAGATTTGCTACTTTCCTTGGTGTCACAGCAAGAGAACTAGTGCCATTAACAATTCCCTCCTGGACTGGGAAAGCACTCTCAGATGAATTCAAAACTGAAATCTGGAAACACATCACTACTTATTACATTGTGGACGAGTGTCACAAGAAAGTAATTTTTCAAAGAATGTCTAAGCTTTGGCGAGATCATAGAAGCTTGACATTAAAAGAAGTAATGAAGCAAGCTGAATTGGTAGGGCTACAAACAGCTGTTGCCATGTGCAAACCTGATAATATACATTCTATGGATGAGTGGTTAAGGTTTATCAAATCCAGGATGACTCCAGCGTTTATGGAAAAGTGTGAAAAGTTTAGACGGATGAGAGAACGAAAAACTTTACTTCATAGGACAAGTAGAAAAAGCTTTGCCTGCATTGAGGATGAATTGAAGCAAAAGAGTGACAAACCTGATTCAATAACAAGGTGTGATGTGTGGCTTCATGCTTATGAAGCAAAGAAGAAGGATTCAAGTGAAGATGTTGAAGATCCAGAAGTAGTGAAACAAGTCAAACAAAACATGGCAGAACAAGTGACTTCGCAAACTCGTTCTGTCAACGATGATGCTGTTTCTAAAGTTTTAGGACCTGATCGACGAGGGCGAGTACGTGGATATGGATTTGGAGCACTTCCTTCGAAGGTAGATGGTCAAACATTTGTGGGTAACAAAGTTACTATGTTGGAGAATGCACTATCTGCTACTTCACGAGAGCTGCAAGGGTTGAAGATGATGGTAAAATATCTTTTAGCTCGATCAGACGAAGGAGAGAAGAAGAATGAAACCAGCAGTAGTGCTCAGCATTCTGCCACTGAGAGTGCAGAAAGTAAAAAAATAAATGCAACTGTTAGAAGTTCTAATAATGATAGAGCAGAGAGCAAGAAAAGAAAACTTAAAGATGGTAGAGTTGGAGGTTCTGAACAAGAAACAAGCAAACAGAGCAAGCAAAAGACACATGCAAGTATTCAGTCAACAGCAAAAGAAAAGGAAGGTGGAAGTCAAGTAATGTTTGTTCCTTCAATGAAAAAATTGAACTTGTTAAGTTGGTTGGATAAAGATGAAAAGATTGTTGCAACTGCTGACCTTCACTCAGAGGATCCAAACGAGAAAGTACATAGTGTTCCTCTTGGTCCTGGCTGTTGGAAAGTTTGGGTGCGCGAAGTCTCTCATGACATAGCTTTGTTTCGGCCAACCCAAGAGTTCTGTACGCTTGCTGCAGCTAAGGGAAGCACAGTGGCTTGGCCCATAAACTTCATCAAGTTACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

510

Amino Acids

57.25

Weight (kDa)

9.29

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 173 - 297 1.1e-17 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 433 - 509 1.3e-07 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 88
Acc36I ACCTGC 1 cut(s) 88
AccII CGCG 1 cut(s) 1422
AclWI GGATC 4 cut(s) 40, 749, 1355, 1368
AcoI YGGCCR 1 cut(s) 1451
AcsI RAATTY 5 cut(s) 64, 109, 117, 191, 317
AcuI CTGAAG 1 cut(s) 93
AfaI GTAC 3 cut(s) 873, 1377, 1471
AfiI CCNNNNNNNGG 1 cut(s) 297
AhlI ACTAGT 1 cut(s) 268
AjnI CCWGG 3 cut(s) 290, 542, 1396
Alw21I GWGCWC 2 cut(s) 895, 1063
Alw26I GTCTC 1 cut(s) 1432
AlwI GGATC 4 cut(s) 40, 749, 1355, 1368
AoxI GGCC 2 cut(s) 1451, 1505
ApeKI GCWGC 4 cut(s) 227, 979, 1478, 1481
ApoI RAATTY 5 cut(s) 64, 109, 117, 191, 317
AspLEI GCGC 1 cut(s) 1422
AspS9I GGNCC 3 cut(s) 851, 1394, 1506
AsuII TTCGAA 1 cut(s) 902
AvaII GGWCC 2 cut(s) 851, 1394
BamHI GGATCC 1 cut(s) 1360
BauI CACGAG 1 cut(s) 972
Bbv12I GWGCWC 2 cut(s) 895, 1063
BbvI GCAGC 4 cut(s) 239, 966, 1465, 1493
BccI CCATC 3 cut(s) 905, 991, 1157
BcgI CGANNNNNNTGC 2 cut(s) 882, 916
BciT130I CCWGG 3 cut(s) 292, 544, 1398
BcoDI GTCTC 1 cut(s) 1432
BcuI ACTAGT 1 cut(s) 268
BfaI CTAG 4 cut(s) 84, 135, 231, 269
BfmI CTRYAG 1 cut(s) 1479
BfuAI ACCTGC 1 cut(s) 88
BisI GCNGC 4 cut(s) 228, 980, 1479, 1482
BlpI GCTNAGC 1 cut(s) 1062
BlsI GCNGC 4 cut(s) 229, 981, 1480, 1483
Bme1390I CCNGG 3 cut(s) 292, 544, 1398
Bme18I GGWCC 2 cut(s) 851, 1394
BmgT120I GGNCC 3 cut(s) 851, 1394, 1506
BmiI GGNNCC 1 cut(s) 1362
BmrFI CCNGG 3 cut(s) 292, 544, 1398
BmrI ACTGGG 1 cut(s) 306
BmsI GCATC 2 cut(s) 91, 820
BmuI ACTGGG 1 cut(s) 306
BoxI GACNNNNGTC 1 cut(s) 369
BpmI CTGGAG 1 cut(s) 537
Bpu10I CCTNAGC 1 cut(s) 1485
Bpu1102I GCTNAGC 1 cut(s) 1062
Bpu14I TTCGAA 1 cut(s) 902
BpuEI CTTGAG 1 cut(s) 81
BsaAI YACGTR 1 cut(s) 875
BsaJI CCNNGG 1 cut(s) 247
Bsc4I CCNNNNNNNGG 1 cut(s) 297
Bse1I ACTGG 1 cut(s) 301
BseBI CCWGG 3 cut(s) 292, 544, 1398
BseDI CCNNGG 1 cut(s) 247
BseGI GGATG 4 cut(s) 523, 552, 594, 655
BseLI CCNNNNNNNGG 1 cut(s) 297
BseMII CTCAG 5 cut(s) 63, 324, 1068, 1076, 1368
BseNI ACTGG 1 cut(s) 301
BseXI GCAGC 4 cut(s) 239, 966, 1465, 1493
BsgI GTGCAG 1 cut(s) 1104
Bsh1236I CGCG 1 cut(s) 1422
BshFI GGCC 2 cut(s) 1453, 1507
BsiHKAI GWGCWC 2 cut(s) 895, 1063
BslI CCNNNNNNNGG 1 cut(s) 297
BsmAI GTCTC 1 cut(s) 1432
BsmI GAATGC 2 cut(s) 958, 1066
BsnI GGCC 2 cut(s) 1453, 1507
Bsp119I TTCGAA 1 cut(s) 902
Bsp1286I GDGCHC 2 cut(s) 895, 1063
Bsp143I GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
Bsp1720I GCTNAGC 1 cut(s) 1062
BspANI GGCC 2 cut(s) 1453, 1507
BspCNI CTCAG 5 cut(s) 62, 323, 1069, 1075, 1367
BspFNI CGCG 1 cut(s) 1422
BspHI TCATGA 1 cut(s) 1432
BspLI GGNNCC 1 cut(s) 1362
BspMAI CTGCAG 1 cut(s) 1483
BspMI ACCTGC 1 cut(s) 88
BspPI GGATC 4 cut(s) 40, 749, 1355, 1368
BspT104I TTCGAA 1 cut(s) 902
BsrI ACTGG 1 cut(s) 301
BssECI CCNNGG 1 cut(s) 247
BssMI GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
BssSI CACGAG 1 cut(s) 972
BssT1I CCWWGG 1 cut(s) 247
Bst2BI CACGAG 1 cut(s) 972
Bst2UI CCWGG 3 cut(s) 292, 544, 1398
Bst4CI ACNGT 2 cut(s) 1111, 1498
BstAPI GCANNNNNTGC 1 cut(s) 962
BstBAI YACGTR 1 cut(s) 875
BstBI TTCGAA 1 cut(s) 902
BstC8I GCNNGC 4 cut(s) 453, 640, 1208, 1476
BstDEI CTNAG 7 cut(s) 49, 310, 402, 1062, 1077, 1354, 1485
BstF5I GGATG 4 cut(s) 523, 552, 594, 655
BstFNI CGCG 1 cut(s) 1422
BstHHI GCGC 1 cut(s) 1422
BstKTI GATC 6 cut(s) 35, 418, 757, 859, 1022, 1363
BstMAI GTCTC 1 cut(s) 1432
BstMBI GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
BstMWI GCNNNNNNNGC 5 cut(s) 236, 639, 719, 962, 1203
BstNI CCWGG 3 cut(s) 292, 544, 1398
BstNSI RCATGY 2 cut(s) 227, 1223
BstPAI GACNNNNGTC 1 cut(s) 369
BstSCI CCNGG 3 cut(s) 290, 542, 1396
BstSFI CTRYAG 1 cut(s) 1479
BstUI CGCG 1 cut(s) 1422
BstV1I GCAGC 4 cut(s) 239, 966, 1465, 1493
BstX2I RGATCY 3 cut(s) 32, 754, 1360
BstYI RGATCY 3 cut(s) 32, 754, 1360
BsuRI GGCC 2 cut(s) 1453, 1507
BtsCI GGATG 4 cut(s) 523, 552, 594, 655
BtsIMutI CAGTG 2 cut(s) 1074, 1503
BveI ACCTGC 1 cut(s) 88
Cac8I GCNNGC 4 cut(s) 453, 640, 1208, 1476
CciI TCATGA 1 cut(s) 1432
CfoI GCGC 1 cut(s) 1422
Cfr13I GGNCC 3 cut(s) 851, 1394, 1506
Csp6I GTAC 3 cut(s) 872, 1376, 1470
CviAII CATG 6 cut(s) 224, 487, 710, 787, 1220, 1433
CviQI GTAC 3 cut(s) 872, 1376, 1470
DdeI CTNAG 7 cut(s) 49, 310, 402, 1062, 1077, 1354, 1485
DpnI GATC 6 cut(s) 34, 417, 756, 858, 1021, 1362
DpnII GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
EaeI YGGCCR 1 cut(s) 1451
Eco130I CCWWGG 1 cut(s) 247
Eco47I GGWCC 2 cut(s) 851, 1394
Eco57I CTGAAG 1 cut(s) 93
EcoO109I RGGNCCY 1 cut(s) 851
EcoRI GAATTC 2 cut(s) 191, 317
EcoRII CCWGG 3 cut(s) 290, 542, 1396
EcoT14I CCWWGG 1 cut(s) 247
ErhI CCWWGG 1 cut(s) 247
FaeI CATG 6 cut(s) 227, 490, 713, 790, 1223, 1436
FalI AAGNNNNNCTT 2 cut(s) 196, 228
FatI CATG 6 cut(s) 223, 486, 709, 786, 1219, 1432
Fnu4HI GCNGC 4 cut(s) 228, 980, 1479, 1482
FokI GGATG 4 cut(s) 530, 559, 601, 662
Fsp4HI GCNGC 4 cut(s) 228, 980, 1479, 1482
FspBI CTAG 4 cut(s) 84, 135, 231, 269
GlaI GCGC 1 cut(s) 1421
GluI GCNGC 4 cut(s) 228, 980, 1479, 1482
GsuI CTGGAG 1 cut(s) 537
HaeIII GGCC 2 cut(s) 1453, 1507
HhaI GCGC 1 cut(s) 1422
Hin1II CATG 6 cut(s) 227, 490, 713, 790, 1223, 1436
Hin6I GCGC 1 cut(s) 1420
HinP1I GCGC 1 cut(s) 1420
HincII GTYRAC 2 cut(s) 823, 1236
HindII GTYRAC 2 cut(s) 823, 1236
HindIII AAGCTT 3 cut(s) 404, 424, 631
HinfI GANTC 3 cut(s) 550, 680, 734
Hpy166II GTNNAC 3 cut(s) 364, 823, 1236
Hpy188I TCNGA 6 cut(s) 52, 115, 313, 1024, 1183, 1357
Hpy188III TCNNGA 6 cut(s) 71, 98, 334, 758, 972, 1433
Hpy8I GTNNAC 3 cut(s) 364, 823, 1236
Hpy99I CGWCG 1 cut(s) 864
HpyAV CCTTC 7 cut(s) 724, 898, 909, 1022, 1247, 1290, 1358
HpyCH4III ACNGT 2 cut(s) 1111, 1498
HpyCH4IV ACGT 1 cut(s) 874
HpyF10VI GCNNNNNNNGC 5 cut(s) 236, 639, 719, 962, 1203
HpyF3I CTNAG 7 cut(s) 49, 310, 402, 1062, 1077, 1354, 1485
HpySE526I ACGT 1 cut(s) 874
Hsp92II CATG 6 cut(s) 227, 490, 713, 790, 1223, 1436
HspAI GCGC 1 cut(s) 1420
Kzo9I GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
LmnI GCTCC 1 cut(s) 890
Lsp1109I GCAGC 4 cut(s) 239, 966, 1465, 1493
LweI GCATC 2 cut(s) 91, 820
MaeI CTAG 4 cut(s) 84, 135, 231, 269
MaeII ACGT 1 cut(s) 874
MaeIII GTNAC 7 cut(s) 253, 371, 668, 799, 929, 937, 1524
MalI GATC 6 cut(s) 34, 417, 756, 858, 1021, 1362
MboI GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
MboII GAAGA 6 cut(s) 739, 755, 764, 1003, 1048, 1051
MflI RGATCY 3 cut(s) 32, 754, 1360
MhlI GDGCHC 2 cut(s) 895, 1063
MlyI GAGTC 1 cut(s) 544
MmeI TCCRAC 4 cut(s) 927, 1153, 1293, 1385
MnlI CCTC 8 cut(s) 46, 131, 298, 640, 857, 1169, 1351, 1398
MseI TTAA 6 cut(s) 278, 434, 527, 1158, 1304, 1531
MslI CAYNNNNRTG 1 cut(s) 714
MspA1I CMGCKG 1 cut(s) 479
MspR9I CCNGG 3 cut(s) 292, 544, 1398
Mva1269I GAATGC 2 cut(s) 958, 1066
MvaI CCWGG 3 cut(s) 292, 544, 1398
MvnI CGCG 1 cut(s) 1422
MwoI GCNNNNNNNGC 5 cut(s) 236, 639, 719, 962, 1203
NdeII GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
NlaIII CATG 6 cut(s) 227, 490, 713, 790, 1223, 1436
NlaIV GGNNCC 1 cut(s) 1362
NmuCI GTSAC 4 cut(s) 253, 371, 668, 799
NspI RCATGY 2 cut(s) 227, 1223
NspV TTCGAA 1 cut(s) 902
PagI TCATGA 1 cut(s) 1432
PaqCI CACCTGC 1 cut(s) 88
PcsI WCGNNNNNNNCGW 1 cut(s) 865
PctI GAATGC 2 cut(s) 958, 1066
PfeI GAWTC 2 cut(s) 680, 734
PfoI TCCNGGA 2 cut(s) 290, 542
PkrI GCNGC 4 cut(s) 229, 981, 1480, 1483
PleI GAGTC 1 cut(s) 544
PpsI GAGTC 1 cut(s) 544
Ppu21I YACGTR 1 cut(s) 875
PpuMI RGGWCCY 1 cut(s) 851
PshAI GACNNNNGTC 1 cut(s) 369
Psp5II RGGWCCY 1 cut(s) 851
Psp6I CCWGG 3 cut(s) 290, 542, 1396
PspGI CCWGG 3 cut(s) 290, 542, 1396
PspN4I GGNNCC 1 cut(s) 1362
PspPI GGNCC 3 cut(s) 851, 1394, 1506
PspPPI RGGWCCY 1 cut(s) 851
PsrI GAACNNNNNNTAC 4 cut(s) 1260, 1292, 1368, 1400
PstI CTGCAG 1 cut(s) 1483
PsuI RGATCY 3 cut(s) 32, 754, 1360
PvuII CAGCTG 1 cut(s) 479
RsaI GTAC 3 cut(s) 873, 1377, 1471
RsaNI GTAC 3 cut(s) 872, 1376, 1470
RseI CAYNNNNRTG 1 cut(s) 714
SaqAI TTAA 6 cut(s) 278, 434, 527, 1158, 1304, 1531
SatI GCNGC 4 cut(s) 228, 980, 1479, 1482
Sau3AI GATC 6 cut(s) 32, 415, 754, 856, 1019, 1360
Sau96I GGNCC 3 cut(s) 851, 1394, 1506
SchI GAGTC 1 cut(s) 544
ScrFI CCNGG 3 cut(s) 292, 544, 1398
SduI GDGCHC 2 cut(s) 895, 1063
SfaNI GCATC 2 cut(s) 91, 820
SfcI CTRYAG 1 cut(s) 1479
SfuI TTCGAA 1 cut(s) 902
SinI GGWCC 2 cut(s) 851, 1394
SmiMI CAYNNNNRTG 1 cut(s) 714
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SpeI ACTAGT 1 cut(s) 268
SspMI CTAG 4 cut(s) 84, 135, 231, 269
StyD4I CCNGG 3 cut(s) 290, 542, 1396
StyI CCWWGG 1 cut(s) 247
TaaI ACNGT 2 cut(s) 1111, 1498
TaiI ACGT 1 cut(s) 877
TaqI TCGA 4 cut(s) 189, 859, 902, 1018
TatI WGTACW 1 cut(s) 1375
TfiI GAWTC 2 cut(s) 680, 734
Tru1I TTAA 6 cut(s) 278, 434, 527, 1158, 1304, 1531
Tru9I TTAA 6 cut(s) 278, 434, 527, 1158, 1304, 1531
TscAI CASTG 2 cut(s) 1081, 1503
TseFI GTSAC 4 cut(s) 253, 371, 668, 799
TseI GCWGC 4 cut(s) 227, 979, 1478, 1481
Tsp45I GTSAC 4 cut(s) 253, 371, 668, 799
TspGWI ACGGA 1 cut(s) 601
TspRI CASTG 2 cut(s) 1081, 1503
VpaK11BI GGWCC 2 cut(s) 851, 1394
XapI RAATTY 5 cut(s) 64, 109, 117, 191, 317
XceI RCATGY 2 cut(s) 227, 1223
XspI CTAG 4 cut(s) 84, 135, 231, 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.