Rh4DG196200

Transposase family tnp2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000089
Physical Location & Seq
Forward (+)
38322889 .. 38328935
6047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG196200.1

Sequence Viewer

Length: 1287 bp
ATGTTTGATCATAGAGCTGATCCCGAGAACGAGAAAGGGGCATGGAATTTTGTGAAAACGGTCACAAGGAACCTGGGAAACCCTGAAATGATCTTATGTCCTTGCATAGATTGTCGCAATGTAGATCATCAGCATGACAGTATTGTTGTTGAATATTTGGTTACAAGGGGAATGGAGGCCAAGTACAAACAAAGAAAAGATTGGTATGAGCATGGGGAGCAGATAATTAATGGTCATAAAAATGAGGAAGTGGTCAATGATGAGATATATGAGTTATTTAGAACTGCCCAATTTTTGGATCAAGACTACATCAAGCCTACTGAGTTTGTTAATGAAGATTGTGTTGAGCCCACTGAAGACATACATGATGATGATTTCATAGAAAAACTAGAAGATGCAGAAACTCCTTTGTACCCGAATTGTTCAAAGTACAACAAGTTATCAGCCATTGTAGCTTTATATCGACTTAAAACTCAGAGTGAGTGGTCTGATAAGAGCAAGCAAATCCCACACACATGTAGTAGAAAAGGAATGGCTCGATTGGCAGAAGATATGAAAAGGAATAGTGCTGACCCTTCTTCTGTCTCTAGAGTTAAAGTTTGGATCAAATCACGTACCAGAAAGGATGGTAAACCAGTAAACACTGAAGTTTCTGAAACTATAGAGAGGGTGAATGAAGTTGAAAGTGAATTGCGATCATCCTTAACAACTAATGTGAGAGAAGATGCTCTGTCTAAAGTCGTAGGACACGATAAACCTAGACGACTAAGAGGAATGGGAAGAGGAATGCCCATCTGCAAATTAGCATTCTTTCAGACTAAAGACAAGCATGTGGCTAAGATGCAAGAGCAACAAATTACCATGCAAGACAGGATAAATCATTTGGAGAACTTGGTCAATAAATTAGTGAAAAATAAGAGCGTCAACACCAACTCATTGAATAAGTGCAAGCTACTAGATTGGAGCGGAACAGAGGACATTGTTGCTGAAGGTCGTTGGGTTTCAAGTGATCCAGAAGAGTCTTTCAATGAAATTCCCTTGGGACCTAATGCAATGAAAGTCTTGGTTGATATCTCAAATAAACCAGATGCTTTTCTTTGGAGGCCTACATCTAATATGTTTTGTTTTCAACATGCTCAAGGTAAAACAATAACATGGCCTGCTGATAGAGTTATTTTTCAAATGGATCAGCAGTTTGAGGAACAAAAGACAATTTATCTATGCCTTCGAGTTCGTACAGCAACTCAAGGAACAAGTGCAAATTATTGTTTGGACTGGAAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_21

Protein Analysis

428

Amino Acids

49.64

Weight (kDa)

6.18

Isoelectric Point (pI)

35.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 4 - 73 1.6e-11 Transposase-associated domain
Transposase_24 PF03004 164 - 262 1.4e-16 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 295
AccBSI CCGCTC 1 cut(s) 966
AciI CCGC 1 cut(s) 966
AclWI GGATC 5 cut(s) 14, 306, 611, 1004, 1194
AcsI RAATTY 2 cut(s) 46, 1032
AcuI CTGAAG 3 cut(s) 375, 666, 1008
AfaI GTAC 5 cut(s) 185, 413, 431, 616, 1237
AfiI CCNNNNNNNGG 1 cut(s) 295
AflIII ACRYGT 1 cut(s) 515
AgsI TTSAA 8 cut(s) 152, 426, 683, 940, 1005, 1027, 1130, 1181
AjnI CCWGG 1 cut(s) 72
AluBI AGCT 3 cut(s) 17, 455, 952
AluI AGCT 3 cut(s) 17, 455, 952
Alw26I GTCTC 1 cut(s) 589
AlwI GGATC 5 cut(s) 14, 306, 611, 1004, 1194
Ama87I CYCGRG 1 cut(s) 23
AoxI GGCC 3 cut(s) 177, 1103, 1157
ApoI RAATTY 2 cut(s) 46, 1032
AseI ATTAAT 1 cut(s) 228
AspS9I GGNCC 1 cut(s) 1043
AsuHPI GGTGA 1 cut(s) 682
AvaI CYCGRG 1 cut(s) 23
AvaII GGWCC 1 cut(s) 1043
BanII GRGCYC 1 cut(s) 351
BbsI GAAGAC 1 cut(s) 363
BccI CCATC 2 cut(s) 620, 800
BciT130I CCWGG 1 cut(s) 74
BclI TGATCA 1 cut(s) 7
BcoDI GTCTC 1 cut(s) 589
BfaI CTAG 4 cut(s) 389, 588, 759, 956
BfmI CTRYAG 1 cut(s) 660
Bme1390I CCNGG 1 cut(s) 74
Bme18I GGWCC 1 cut(s) 1043
BmeT110I CYCGRG 1 cut(s) 23
BmgT120I GGNCC 1 cut(s) 1043
BmiI GGNNCC 2 cut(s) 71, 1044
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 4 cut(s) 385, 715, 831, 1078
BpiI GAAGAC 1 cut(s) 363
BpuEI CTTGAG 2 cut(s) 1122, 1230
BsaAI YACGTR 1 cut(s) 614
BsaJI CCNNGG 2 cut(s) 73, 1038
BsaXI ACNNNNNCTCC 2 cut(s) 167, 197
Bsc4I CCNNNNNNNGG 1 cut(s) 295
Bse1I ACTGG 2 cut(s) 635, 1280
Bse3DI GCAATG 2 cut(s) 124, 1059
BseBI CCWGG 1 cut(s) 74
BseDI CCNNGG 2 cut(s) 73, 1038
BseGI GGATG 2 cut(s) 631, 698
BseLI CCNNNNNNNGG 1 cut(s) 295
BseMI GCAATG 2 cut(s) 124, 1059
BseMII CTCAG 2 cut(s) 312, 488
BseNI ACTGG 2 cut(s) 635, 1280
BshFI GGCC 3 cut(s) 179, 1105, 1159
BsiHKCI CYCGRG 1 cut(s) 23
BslFI GGGAC 1 cut(s) 1056
BslI CCNNNNNNNGG 1 cut(s) 295
BsmAI GTCTC 1 cut(s) 589
BsmFI GGGAC 1 cut(s) 1056
BsmI GAATGC 2 cut(s) 792, 806
BsnI GGCC 3 cut(s) 179, 1105, 1159
BsoBI CYCGRG 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 351
Bsp143I GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
BspACI CCGC 1 cut(s) 966
BspANI GGCC 3 cut(s) 179, 1105, 1159
BspCNI CTCAG 2 cut(s) 313, 487
BspLI GGNNCC 2 cut(s) 71, 1044
BspPI GGATC 5 cut(s) 14, 306, 611, 1004, 1194
BsrBI CCGCTC 1 cut(s) 966
BsrDI GCAATG 2 cut(s) 124, 1059
BsrI ACTGG 2 cut(s) 635, 1280
BssECI CCNNGG 2 cut(s) 73, 1038
BssMI GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
BssT1I CCWWGG 1 cut(s) 1038
Bst2UI CCWGG 1 cut(s) 74
Bst4CI ACNGT 2 cut(s) 61, 140
Bst6I CTCTTC 2 cut(s) 775, 1011
BstBAI YACGTR 1 cut(s) 614
BstC8I GCNNGC 3 cut(s) 500, 950, 1161
BstDEI CTNAG 4 cut(s) 321, 474, 767, 837
BstF5I GGATG 2 cut(s) 631, 698
BstKTI GATC 9 cut(s) 10, 22, 93, 127, 301, 606, 698, 1012, 1189
BstMAI GTCTC 1 cut(s) 589
BstMBI GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
BstMWI GCNNNNNNNGC 3 cut(s) 217, 452, 542
BstNI CCWGG 1 cut(s) 74
BstNSI RCATGY 3 cut(s) 519, 833, 1136
BstSCI CCNGG 1 cut(s) 72
BstSFI CTRYAG 1 cut(s) 660
BstV2I GAAGAC 1 cut(s) 363
BsuRI GGCC 3 cut(s) 179, 1105, 1159
BtsCI GGATG 2 cut(s) 631, 698
BtsIMutI CAGTG 2 cut(s) 351, 642
Cac8I GCNNGC 3 cut(s) 500, 950, 1161
Cfr13I GGNCC 1 cut(s) 1043
CseI GACGC 1 cut(s) 910
Csp6I GTAC 5 cut(s) 184, 412, 430, 615, 1236
CviAII CATG 9 cut(s) 42, 134, 212, 365, 516, 830, 862, 1133, 1155
CviQI GTAC 5 cut(s) 184, 412, 430, 615, 1236
DdeI CTNAG 4 cut(s) 321, 474, 767, 837
DpnI GATC 9 cut(s) 9, 21, 92, 126, 300, 605, 697, 1011, 1188
DpnII GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
Eam1104I CTCTTC 2 cut(s) 775, 1011
EarI CTCTTC 2 cut(s) 775, 1011
Eco130I CCWWGG 1 cut(s) 1038
Eco147I AGGCCT 1 cut(s) 1105
Eco24I GRGCYC 1 cut(s) 351
Eco32I GATATC 1 cut(s) 1072
Eco47I GGWCC 1 cut(s) 1043
Eco57I CTGAAG 3 cut(s) 375, 666, 1008
Eco88I CYCGRG 1 cut(s) 23
EcoO109I RGGNCCY 1 cut(s) 1043
EcoRII CCWGG 1 cut(s) 72
EcoRV GATATC 1 cut(s) 1072
EcoT14I CCWWGG 1 cut(s) 1038
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 1038
FaeI CATG 9 cut(s) 45, 137, 215, 368, 519, 833, 865, 1136, 1158
FaqI GGGAC 1 cut(s) 1056
FatI CATG 9 cut(s) 41, 133, 211, 364, 515, 829, 861, 1132, 1154
FbaI TGATCA 1 cut(s) 7
FokI GGATG 2 cut(s) 638, 685
FriOI GRGCYC 1 cut(s) 351
FspBI CTAG 4 cut(s) 389, 588, 759, 956
HaeIII GGCC 3 cut(s) 179, 1105, 1159
HgaI GACGC 1 cut(s) 910
Hin1II CATG 9 cut(s) 45, 137, 215, 368, 519, 833, 865, 1136, 1158
HincII GTYRAC 1 cut(s) 925
HindII GTYRAC 1 cut(s) 925
HinfI GANTC 1 cut(s) 1019
HphI GGTGA 1 cut(s) 682
Hpy166II GTNNAC 3 cut(s) 632, 640, 925
Hpy188I TCNGA 4 cut(s) 477, 490, 655, 816
Hpy188III TCNNGA 4 cut(s) 23, 302, 588, 1013
Hpy8I GTNNAC 3 cut(s) 632, 640, 925
HpyAV CCTTC 3 cut(s) 585, 983, 1235
HpyCH4III ACNGT 2 cut(s) 61, 140
HpyCH4IV ACGT 1 cut(s) 613
HpyCH4V TGCA 8 cut(s) 105, 398, 798, 844, 865, 948, 1052, 1259
HpyF10VI GCNNNNNNNGC 3 cut(s) 217, 452, 542
HpyF3I CTNAG 4 cut(s) 321, 474, 767, 837
HpySE526I ACGT 1 cut(s) 613
Hsp92II CATG 9 cut(s) 45, 137, 215, 368, 519, 833, 865, 1136, 1158
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
LmnI GCTCC 2 cut(s) 217, 963
LweI GCATC 4 cut(s) 385, 715, 831, 1078
MaeI CTAG 4 cut(s) 389, 588, 759, 956
MaeII ACGT 1 cut(s) 613
MaeIII GTNAC 2 cut(s) 61, 160
MalI GATC 9 cut(s) 9, 21, 92, 126, 300, 605, 697, 1011, 1188
MbiI CCGCTC 1 cut(s) 966
MboI GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
MboII GAAGA 8 cut(s) 347, 368, 404, 560, 570, 734, 792, 1028
MhlI GDGCHC 1 cut(s) 351
MlyI GAGTC 1 cut(s) 1028
MnlI CCTC 8 cut(s) 169, 238, 660, 764, 776, 967, 1095, 1192
MseI TTAA 5 cut(s) 228, 330, 468, 594, 704
MslI CAYNNNNRTG 4 cut(s) 132, 240, 369, 514
MspR9I CCNGG 1 cut(s) 74
Mva1269I GAATGC 2 cut(s) 792, 806
MvaI CCWGG 1 cut(s) 74
MwoI GCNNNNNNNGC 3 cut(s) 217, 452, 542
NdeII GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
NlaIII CATG 9 cut(s) 45, 137, 215, 368, 519, 833, 865, 1136, 1158
NlaIV GGNNCC 2 cut(s) 71, 1044
NmuCI GTSAC 1 cut(s) 61
NspI RCATGY 3 cut(s) 519, 833, 1136
PceI AGGCCT 1 cut(s) 1105
PciI ACATGT 1 cut(s) 515
PcsI WCGNNNNNNNCGW 1 cut(s) 747
PctI GAATGC 2 cut(s) 792, 806
PflMI CCANNNNNTGG 1 cut(s) 295
PleI GAGTC 1 cut(s) 1027
PpsI GAGTC 1 cut(s) 1027
Ppu21I YACGTR 1 cut(s) 614
PpuMI RGGWCCY 1 cut(s) 1043
PscI ACATGT 1 cut(s) 515
PshBI ATTAAT 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 1043
Psp6I CCWGG 1 cut(s) 72
PspGI CCWGG 1 cut(s) 72
PspN4I GGNNCC 2 cut(s) 71, 1044
PspPI GGNCC 1 cut(s) 1043
PspPPI RGGWCCY 1 cut(s) 1043
RsaI GTAC 5 cut(s) 185, 413, 431, 616, 1237
RsaNI GTAC 5 cut(s) 184, 412, 430, 615, 1236
RseI CAYNNNNRTG 4 cut(s) 132, 240, 369, 514
SaqAI TTAA 5 cut(s) 228, 330, 468, 594, 704
Sau3AI GATC 9 cut(s) 7, 19, 90, 124, 298, 603, 695, 1009, 1186
Sau96I GGNCC 1 cut(s) 1043
SchI GAGTC 1 cut(s) 1028
ScrFI CCNGG 1 cut(s) 74
SduI GDGCHC 1 cut(s) 351
SetI ASST 9 cut(s) 19, 75, 457, 616, 760, 954, 994, 1048, 1144
SfaNI GCATC 4 cut(s) 385, 715, 831, 1078
SfcI CTRYAG 1 cut(s) 660
SinI GGWCC 1 cut(s) 1043
SmiMI CAYNNNNRTG 4 cut(s) 132, 240, 369, 514
SmlI CTYRAG 2 cut(s) 1137, 1245
SmoI CTYRAG 2 cut(s) 1137, 1245
SseBI AGGCCT 1 cut(s) 1105
SsiI CCGC 1 cut(s) 966
SspI AATATT 1 cut(s) 155
SspMI CTAG 4 cut(s) 389, 588, 759, 956
StuI AGGCCT 1 cut(s) 1105
StyD4I CCNGG 1 cut(s) 72
StyI CCWWGG 1 cut(s) 1038
TaaI ACNGT 2 cut(s) 61, 140
TaiI ACGT 1 cut(s) 616
TaqI TCGA 3 cut(s) 463, 538, 1228
TatI WGTACW 2 cut(s) 183, 429
Tru1I TTAA 5 cut(s) 228, 330, 468, 594, 704
Tru9I TTAA 5 cut(s) 228, 330, 468, 594, 704
TscAI CASTG 2 cut(s) 358, 649
TseFI GTSAC 1 cut(s) 61
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 6 cut(s) 348, 367, 569, 690, 1044, 1070
TspRI CASTG 2 cut(s) 358, 649
Van91I CCANNNNNTGG 1 cut(s) 295
VpaK11BI GGWCC 1 cut(s) 1043
VspI ATTAAT 1 cut(s) 228
XapI RAATTY 2 cut(s) 46, 1032
XbaI TCTAGA 1 cut(s) 587
XceI RCATGY 3 cut(s) 519, 833, 1136
XspI CTAG 4 cut(s) 389, 588, 759, 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.