Rh7DG191100

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000089
Physical Location & Seq
Forward (+)
17702220 .. 17727962
25743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG191100.1

Sequence Viewer

Length: 1458 bp
ATGGGATGTATATGGAGGGCCTCAAAGTCAAGGTTAGTGAGCCAAATACAGGAGGCCAAAAACAAAGGAGAAAAACTTCTACTCCAACCTAGGAACATTCAAAGTAGAGTAGAGTGGAAAAGGTTCATCCGTGCAAAAACTAGTCCAGCATTAGGGTACTCGGCTGTCAGTGATAAGTATAAGGCAATTAGGCGCAAGCAAATCCCACACACATGTAGCCGAAAAGGAATGGCTCGATTGGCAGAAGATATGAAAAGGAATAGTGCCGACCCTTCTTCTGTATCTAGAGTTAAAGTTTGGATTAGATCACGTACTAGAAAGGATGGTAAACCAGTAAACACTGAAGTTTCTAAAACTATAGAGAGGGTAAATGTAGTTGAAAGTGATTTGCCATCATCCTCAACAACTAATGTGAGAGAAGATGCTCTGTCTAAAGTCTTAGGACACGATAAACCTGGACGACTAAGAGGAATGGGAAGAGGAATGACCATCAGCAAATTGGCATTCTTTCAGACTAAGGACAAGCATGTGGCTAAGATGCAAGAGCAACAAATTAACATGCAAGACAGGATAAATCATTTGGAGAACTTGATTCAACAAAGTGAGAAAGAGGAGAAAACATCTCCAGTGAGCGTCAACACCAACTCATTGAATAAGTGCAAGCTACTAGATTGGAGTGGAACAGAGGACATTGTTGCTGAAGGTCGTTGGGTTTCAAGTGATCCAGAAGAGTCTGTCAATGAAATTCCCTTGGGACCTAATGCAATGAAAGTCTTGGTTGATATCTCAAATAAACCAGATGCTTTTCTTTGGAGGCCTACATCTAATATGTTTTGTTTTCAATATGCTCAAGGTAAAACAAGAGCATGGCCTGCTGACAGAGTTATTTTTCAAATGGATCAGCAGTCTGACGAACAAGACAATTTATCTATGCCTTCGAGTTTGTACAGCAACTCAAGGAACAAGTGCAAATTATTTGATTGGACTGGAAAAGATGAAACTATTGCAGAAGGAAGTTGGCATTCAAGTGATCCAAAAGCGTTAGTAAATGGTATTCCTCTTGGACCTAATGGCATGATAGTTTGGGTAGATATTCCAAAGAATCATGAAGCGTTTTTATGGAGGCCTACAATAGATATGAAATGCATTGAAGATGCCGTGAATTCTGCTATACATGGCCAGCTGACAAAGTGGTTTTCTTTTAGAGCTCCATTCAGAGATGCTAAGAGAGCTATATATGAAGCTGGAGACTACATCACCGCCTTGAGCTTGCTGGATTGCAATACCTTGGTAGACCACATCTGCATCTTTGAGGGAGATGATAAAACCTGGTGCCTTGGCTATTATTTCACCTATAGCAGTTGGTATTGCGTTCTGAATATTTGGATACTATCCGGAGGCAAAGGAAGTGATTGTCATAAGGGTGCAATTACAGGAGACATGGCTTTCCCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

485

Amino Acids

54.94

Weight (kDa)

9.06

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 55 - 162 4.3e-18 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1332
AccI GTMKAC 1 cut(s) 1293
AccIII TCCGGA 1 cut(s) 1394
AciI CCGC 1 cut(s) 1260
AclWI GGATC 3 cut(s) 716, 906, 1025
AcoI YGGCCR 1 cut(s) 1177
AcsI RAATTY 2 cut(s) 744, 1162
AcuI CTGAAG 2 cut(s) 363, 720
AfaI GTAC 3 cut(s) 158, 313, 947
AfiI CCNNNNNNNGG 2 cut(s) 49, 152
AflIII ACRYGT 1 cut(s) 212
AgsI TTSAA 9 cut(s) 101, 380, 596, 652, 717, 842, 893, 1026, 1151
AhlI ACTAGT 1 cut(s) 140
AjnI CCWGG 2 cut(s) 454, 1328
AluBI AGCT 6 cut(s) 664, 1183, 1208, 1232, 1244, 1269
AluI AGCT 6 cut(s) 664, 1183, 1208, 1232, 1244, 1269
Alw21I GWGCWC 1 cut(s) 1210
Alw26I GTCTC 2 cut(s) 1242, 1431
AlwI GGATC 3 cut(s) 716, 906, 1025
Aor13HI TCCGGA 1 cut(s) 1394
AoxI GGCC 6 cut(s) 18, 54, 815, 869, 1124, 1177
ApoI RAATTY 2 cut(s) 744, 1162
Asp700I GAANNNNTTC 2 cut(s) 75, 122
AspA2I CCTAGG 1 cut(s) 89
AspLEI GCGC 1 cut(s) 195
AspS9I GGNCC 3 cut(s) 18, 755, 1064
AsuHPI GGTGA 2 cut(s) 1249, 1342
AvaII GGWCC 2 cut(s) 755, 1064
AvrII CCTAGG 1 cut(s) 89
BalI TGGCCA 1 cut(s) 1179
BanI GGYRCC 1 cut(s) 1332
BanII GRGCYC 1 cut(s) 1210
Bbv12I GWGCWC 1 cut(s) 1210
BccI CCATC 3 cut(s) 317, 400, 497
BceAI ACGGC 1 cut(s) 1142
BciT130I CCWGG 2 cut(s) 456, 1330
BciVI GTATCC 1 cut(s) 1380
BcoDI GTCTC 2 cut(s) 1242, 1431
BcuI ACTAGT 1 cut(s) 140
BfaI CTAG 5 cut(s) 90, 141, 285, 315, 668
BfmI CTRYAG 2 cut(s) 357, 1354
BfuI GTATCC 1 cut(s) 1380
BlnI CCTAGG 1 cut(s) 89
Bme1390I CCNGG 2 cut(s) 456, 1330
Bme18I GGWCC 2 cut(s) 755, 1064
BmgT120I GGNCC 3 cut(s) 18, 755, 1064
BmiI GGNNCC 2 cut(s) 756, 1334
BmrFI CCNGG 2 cut(s) 456, 1330
BmsI GCATC 6 cut(s) 412, 528, 790, 1144, 1210, 1314
BpmI CTGGAG 2 cut(s) 609, 1266
BpuEI CTTGAG 3 cut(s) 834, 940, 1285
BsaAI YACGTR 1 cut(s) 311
BsaJI CCNNGG 4 cut(s) 89, 750, 1287, 1336
BsaWI WCCGGW 1 cut(s) 1394
BsaXI ACNNNNNCTCC 2 cut(s) 66, 96
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 152
Bse1I ACTGG 3 cut(s) 332, 626, 991
Bse3DI GCAATG 1 cut(s) 771
BseAI TCCGGA 1 cut(s) 1394
BseBI CCWGG 2 cut(s) 456, 1330
BseDI CCNNGG 4 cut(s) 89, 750, 1287, 1336
BseGI GGATG 4 cut(s) 11, 126, 328, 395
BseLI CCNNNNNNNGG 2 cut(s) 49, 152
BseMI GCAATG 1 cut(s) 771
BseNI ACTGG 3 cut(s) 332, 626, 991
BseRI GAGGAG 1 cut(s) 626
BshFI GGCC 6 cut(s) 20, 56, 817, 871, 1126, 1179
BshNI GGYRCC 1 cut(s) 1332
BsiHKAI GWGCWC 1 cut(s) 1210
BsiSI CCGG 1 cut(s) 1395
BslFI GGGAC 1 cut(s) 768
BslI CCNNNNNNNGG 2 cut(s) 49, 152
BsmAI GTCTC 2 cut(s) 1242, 1431
BsmFI GGGAC 1 cut(s) 768
BsmI GAATGC 2 cut(s) 503, 1021
BsnI GGCC 6 cut(s) 20, 56, 817, 871, 1126, 1179
Bsp1286I GDGCHC 1 cut(s) 1210
Bsp13I TCCGGA 1 cut(s) 1394
Bsp1407I TGTACA 1 cut(s) 945
Bsp143I GATC 4 cut(s) 305, 721, 898, 1030
BspACI CCGC 1 cut(s) 1260
BspANI GGCC 6 cut(s) 20, 56, 817, 871, 1126, 1179
BspEI TCCGGA 1 cut(s) 1394
BspHI TCATGA 1 cut(s) 1105
BspLI GGNNCC 2 cut(s) 756, 1334
BspPI GGATC 3 cut(s) 716, 906, 1025
BspT107I GGYRCC 1 cut(s) 1332
BsrDI GCAATG 1 cut(s) 771
BsrGI TGTACA 1 cut(s) 945
BsrI ACTGG 3 cut(s) 332, 626, 991
BssECI CCNNGG 4 cut(s) 89, 750, 1287, 1336
BssMI GATC 4 cut(s) 305, 721, 898, 1030
BssT1I CCWWGG 4 cut(s) 89, 750, 1287, 1336
Bst2UI CCWGG 2 cut(s) 456, 1330
Bst6I CTCTTC 2 cut(s) 472, 723
BstAPI GCANNNNNTGC 1 cut(s) 872
BstAUI TGTACA 1 cut(s) 945
BstBAI YACGTR 1 cut(s) 311
BstC8I GCNNGC 5 cut(s) 197, 662, 873, 1181, 1271
BstDEI CTNAG 5 cut(s) 439, 464, 516, 534, 1224
BstF5I GGATG 4 cut(s) 11, 126, 328, 395
BstHHI GCGC 1 cut(s) 195
BstKTI GATC 4 cut(s) 308, 724, 901, 1033
BstMAI GTCTC 2 cut(s) 1242, 1431
BstMBI GATC 4 cut(s) 305, 721, 898, 1030
BstMWI GCNNNNNNNGC 3 cut(s) 239, 872, 1229
BstNI CCWGG 2 cut(s) 456, 1330
BstNSI RCATGY 3 cut(s) 216, 530, 562
BstSCI CCNGG 2 cut(s) 454, 1328
BstSFI CTRYAG 2 cut(s) 357, 1354
BsuI GTATCC 1 cut(s) 1380
BsuRI GGCC 6 cut(s) 20, 56, 817, 871, 1126, 1179
BtsCI GGATG 4 cut(s) 11, 126, 328, 395
BtsIMutI CAGTG 3 cut(s) 175, 339, 633
Cac8I GCNNGC 5 cut(s) 197, 662, 873, 1181, 1271
CciI TCATGA 1 cut(s) 1105
CfoI GCGC 1 cut(s) 195
Cfr13I GGNCC 3 cut(s) 18, 755, 1064
CseI GACGC 1 cut(s) 622
CsiI ACCWGGT 1 cut(s) 1328
Csp6I GTAC 3 cut(s) 157, 312, 946
CviAII CATG 8 cut(s) 213, 527, 559, 867, 1075, 1106, 1175, 1441
CviQI GTAC 3 cut(s) 157, 312, 946
DdeI CTNAG 5 cut(s) 439, 464, 516, 534, 1224
DpnI GATC 4 cut(s) 307, 723, 900, 1032
DpnII GATC 4 cut(s) 305, 721, 898, 1030
EaeI YGGCCR 1 cut(s) 1177
Eam1104I CTCTTC 2 cut(s) 472, 723
EarI CTCTTC 2 cut(s) 472, 723
Ecl136II GAGCTC 1 cut(s) 1208
Eco130I CCWWGG 4 cut(s) 89, 750, 1287, 1336
Eco147I AGGCCT 2 cut(s) 817, 1126
Eco24I GRGCYC 1 cut(s) 1210
Eco32I GATATC 1 cut(s) 784
Eco47I GGWCC 2 cut(s) 755, 1064
Eco53kI GAGCTC 1 cut(s) 1208
Eco57I CTGAAG 2 cut(s) 363, 720
EcoICRI GAGCTC 1 cut(s) 1208
EcoO109I RGGNCCY 2 cut(s) 18, 755
EcoRI GAATTC 1 cut(s) 1162
EcoRII CCWGG 2 cut(s) 454, 1328
EcoRV GATATC 1 cut(s) 784
EcoT14I CCWWGG 4 cut(s) 89, 750, 1287, 1336
EcoT22I ATGCAT 1 cut(s) 1148
EcoT38I GRGCYC 1 cut(s) 1210
ErhI CCWWGG 4 cut(s) 89, 750, 1287, 1336
FaeI CATG 8 cut(s) 216, 530, 562, 870, 1078, 1109, 1178, 1444
FaqI GGGAC 1 cut(s) 768
FatI CATG 8 cut(s) 212, 526, 558, 866, 1074, 1105, 1174, 1440
FblI GTMKAC 1 cut(s) 1293
FokI GGATG 4 cut(s) 18, 113, 335, 382
FriOI GRGCYC 1 cut(s) 1210
FspBI CTAG 5 cut(s) 90, 141, 285, 315, 668
GlaI GCGC 1 cut(s) 194
GsuI CTGGAG 2 cut(s) 609, 1266
HaeIII GGCC 6 cut(s) 20, 56, 817, 871, 1126, 1179
HapII CCGG 1 cut(s) 1395
HgaI GACGC 1 cut(s) 622
HhaI GCGC 1 cut(s) 195
Hin1II CATG 8 cut(s) 216, 530, 562, 870, 1078, 1109, 1178, 1444
Hin6I GCGC 1 cut(s) 193
HinP1I GCGC 1 cut(s) 193
HincII GTYRAC 1 cut(s) 637
HindII GTYRAC 1 cut(s) 637
HinfI GANTC 3 cut(s) 592, 731, 1102
HpaII CCGG 1 cut(s) 1395
HphI GGTGA 2 cut(s) 1249, 1342
Hpy166II GTNNAC 4 cut(s) 329, 337, 637, 1294
Hpy188I TCNGA 4 cut(s) 513, 910, 1217, 1377
Hpy188III TCNNGA 4 cut(s) 285, 725, 1106, 1395
Hpy8I GTNNAC 4 cut(s) 329, 337, 637, 1294
HpyAV CCTTC 4 cut(s) 282, 695, 945, 1004
HpyCH4IV ACGT 1 cut(s) 310
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 872, 1229
HpyF3I CTNAG 5 cut(s) 439, 464, 516, 534, 1224
HpySE526I ACGT 1 cut(s) 310
Hsp92II CATG 8 cut(s) 216, 530, 562, 870, 1078, 1109, 1178, 1444
HspAI GCGC 1 cut(s) 193
Kpn2I TCCGGA 1 cut(s) 1394
Kzo9I GATC 4 cut(s) 305, 721, 898, 1030
LmnI GCTCC 1 cut(s) 1213
LweI GCATC 6 cut(s) 412, 528, 790, 1144, 1210, 1314
MabI ACCWGGT 1 cut(s) 1328
MaeI CTAG 5 cut(s) 90, 141, 285, 315, 668
MaeII ACGT 1 cut(s) 310
MalI GATC 4 cut(s) 307, 723, 900, 1032
MboI GATC 4 cut(s) 305, 721, 898, 1030
MboII GAAGA 6 cut(s) 257, 267, 431, 489, 740, 1163
MhlI GDGCHC 1 cut(s) 1210
MlsI TGGCCA 1 cut(s) 1179
MluCI AATT 8 cut(s) 186, 497, 552, 744, 922, 971, 1162, 1428
MluNI TGGCCA 1 cut(s) 1179
MlyI GAGTC 1 cut(s) 740
MmeI TCCRAC 1 cut(s) 109
Mox20I TGGCCA 1 cut(s) 1179
Mph1103I ATGCAT 1 cut(s) 1148
MroI TCCGGA 1 cut(s) 1394
MroXI GAANNNNTTC 2 cut(s) 75, 122
MscI TGGCCA 1 cut(s) 1179
MseI TTAA 2 cut(s) 291, 555
MslI CAYNNNNRTG 3 cut(s) 211, 1026, 1422
Msp20I TGGCCA 1 cut(s) 1179
MspA1I CMGCKG 1 cut(s) 1183
MspI CCGG 1 cut(s) 1395
MspR9I CCNGG 2 cut(s) 456, 1330
Mva1269I GAATGC 2 cut(s) 503, 1021
MvaI CCWGG 2 cut(s) 456, 1330
MwoI GCNNNNNNNGC 3 cut(s) 239, 872, 1229
NdeII GATC 4 cut(s) 305, 721, 898, 1030
NlaIII CATG 8 cut(s) 216, 530, 562, 870, 1078, 1109, 1178, 1444
NlaIV GGNNCC 2 cut(s) 756, 1334
NmeAIII GCCGAG 1 cut(s) 140
NsiI ATGCAT 1 cut(s) 1148
NspI RCATGY 3 cut(s) 216, 530, 562
PagI TCATGA 1 cut(s) 1105
PceI AGGCCT 2 cut(s) 817, 1126
PciI ACATGT 1 cut(s) 212
PctI GAATGC 2 cut(s) 503, 1021
PdmI GAANNNNTTC 2 cut(s) 75, 122
PfeI GAWTC 2 cut(s) 592, 1102
PleI GAGTC 1 cut(s) 739
PpsI GAGTC 1 cut(s) 739
Ppu21I YACGTR 1 cut(s) 311
PpuMI RGGWCCY 1 cut(s) 755
PscI ACATGT 1 cut(s) 212
Psp124BI GAGCTC 1 cut(s) 1210
Psp5II RGGWCCY 1 cut(s) 755
Psp6I CCWGG 2 cut(s) 454, 1328
PspGI CCWGG 2 cut(s) 454, 1328
PspN4I GGNNCC 2 cut(s) 756, 1334
PspPI GGNCC 3 cut(s) 18, 755, 1064
PspPPI RGGWCCY 1 cut(s) 755
PvuII CAGCTG 1 cut(s) 1183
RsaI GTAC 3 cut(s) 158, 313, 947
RsaNI GTAC 3 cut(s) 157, 312, 946
RseI CAYNNNNRTG 3 cut(s) 211, 1026, 1422
SacI GAGCTC 1 cut(s) 1210
SaqAI TTAA 2 cut(s) 291, 555
Sau3AI GATC 4 cut(s) 305, 721, 898, 1030
Sau96I GGNCC 3 cut(s) 18, 755, 1064
SchI GAGTC 1 cut(s) 740
ScrFI CCNGG 2 cut(s) 456, 1330
SduI GDGCHC 1 cut(s) 1210
SexAI ACCWGGT 1 cut(s) 1328
SfaNI GCATC 6 cut(s) 412, 528, 790, 1144, 1210, 1314
SfcI CTRYAG 2 cut(s) 357, 1354
SinI GGWCC 2 cut(s) 755, 1064
SmiMI CAYNNNNRTG 3 cut(s) 211, 1026, 1422
SmlI CTYRAG 3 cut(s) 849, 955, 1264
SmoI CTYRAG 3 cut(s) 849, 955, 1264
SpeI ACTAGT 1 cut(s) 140
Sse9I AATT 8 cut(s) 186, 497, 552, 744, 922, 971, 1162, 1428
SseBI AGGCCT 2 cut(s) 817, 1126
SsiI CCGC 1 cut(s) 1260
SspI AATATT 1 cut(s) 1381
SspMI CTAG 5 cut(s) 90, 141, 285, 315, 668
SstI GAGCTC 1 cut(s) 1210
StuI AGGCCT 2 cut(s) 817, 1126
StyD4I CCNGG 2 cut(s) 454, 1328
StyI CCWWGG 4 cut(s) 89, 750, 1287, 1336
TaiI ACGT 1 cut(s) 313
TaqI TCGA 2 cut(s) 235, 938
TasI AATT 8 cut(s) 186, 497, 552, 744, 922, 971, 1162, 1428
TatI WGTACW 1 cut(s) 945
TfiI GAWTC 2 cut(s) 592, 1102
Tru1I TTAA 2 cut(s) 291, 555
Tru9I TTAA 2 cut(s) 291, 555
TscAI CASTG 3 cut(s) 175, 346, 633
TspDTI ATGAA 8 cut(s) 115, 266, 756, 782, 1011, 1122, 1154, 1254
TspGWI ACGGA 1 cut(s) 119
TspRI CASTG 3 cut(s) 175, 346, 633
VpaK11BI GGWCC 2 cut(s) 755, 1064
XapI RAATTY 2 cut(s) 744, 1162
XbaI TCTAGA 1 cut(s) 284
XceI RCATGY 3 cut(s) 216, 530, 562
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XmaJI CCTAGG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 1293
XmnI GAANNNNTTC 2 cut(s) 75, 122
XspI CTAG 5 cut(s) 90, 141, 285, 315, 668
Zsp2I ATGCAT 1 cut(s) 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.