Rh6BG245600

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000089
Physical Location & Seq
Forward (+)
45630526 .. 45659229
28704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG245600.1

Sequence Viewer

Length: 1218 bp
ATGACTGCAACAGAGAAGAAAAAGAAAGGAGTCTCAGAGCTTTTGAATTTTCCTGAAACCTTTCTCAATTCTCTACAACAGAGCTGCTTGTTGATGCTTCTCAATCATCTGAATGACCAGTATCTCCAACTCTCTTTGGAATTTCTTAGAGGTTCGTTTCGCTTTGTTCGTTTGGAGATTAACCATGCTGGAGCTGGTGGGTTGTGGGCTGAGCTTGTAAGCAACAGAGATGAGAAGTTCTCACAAGAGGAAACATGCTCGGAAGCCACACAAGCATCAAAGGTTTCTCATGTAGGGGATAAGAATATACAAGTTAGTCCAGAACTATGTCAAGATACATTAAAACCATGTGGTGACAGTCCAGAACCTAACATCCAACACCACTCACCTTCCACAAAAGAAGTGGTACAAGAAGATGCACCACCGTCACAAGATTCAGCTGCAGACCCGAGAGGACTTAAGAAAACTAGGGGTCCAACGAAAATGAAAGATATTGATGTGGAGCTCAAATTCATGTTGAATTTACTGATAAAGGCAAGATTTGACTTGGAGGAGGAATGGCAGAAGGCTGTCATATTTAAATCGATGGGATGTATATGGAGGGCCTCAAAGTCAAGGTTAGTGAGCCAAATACAGGAGGCCAAAAACAAAGGAGAAAGACTCCGACTCCAACCTAAGAACATTCAAAGTAGAGCAGAGTGGAAAAGGTTCGTCCGTGCAAAAACTAGTCCAGCATTTAAGAAAAGGAATAGTGCCGACCCTTCTTCTGTATCTAGAGTTAAAGTTTGGATCAGATCACGTACCAGAAAGGATGGTAAACTAGTAAACACTGAAGTTTCTAAAACTATAGAGAGGGTGAATGTAGTTGAAAGTGATTTGCCATCATCCTCAACAACTAATGTGAGAGAAGATGCTCTGTCTAAAGTCTTAGGACACGATAAACCTGGACGACTAAGAGGAATGGGAAGAGGAATGACCATCAACAAATTGGCATTCTTTCAGACTAAGGACAAGCATGTGGCTAAGATGCAAGAGCAACAAATTAACATGCAAGACAGGATAAATCATTTGGAGAACTTGGTCAATAAATTAGTGAAAAATAAGATTCAACAAAGTGAGGAAGAGGAGAAAACATCTCCAATGAGTTCGTACAACAACTCAAGGATCAAGTGCAAATTATTTGATTGGACTAGAAAAGATGAAATAGTTGCAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23 Transposase_24

Protein Analysis

405

Amino Acids

46.22

Weight (kDa)

9.49

Isoelectric Point (pI)

53.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 193 - 325 1.7e-10 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 797, 1172
AcsI RAATTY 4 cut(s) 46, 140, 509, 520
AcuI CTGAAG 1 cut(s) 852
AfaI GTAC 3 cut(s) 408, 802, 1151
AfiI CCNNNNNNNGG 1 cut(s) 634
AflII CTTAAG 1 cut(s) 458
AgsI TTSAA 5 cut(s) 46, 520, 686, 869, 1109
AhlI ACTAGT 2 cut(s) 725, 820
AjnI CCWGG 1 cut(s) 943
AloI GAACNNNNNNTCC 2 cut(s) 357, 389
AluBI AGCT 6 cut(s) 40, 84, 194, 214, 440, 505
AluI AGCT 6 cut(s) 40, 84, 194, 214, 440, 505
Alw21I GWGCWC 1 cut(s) 507
Alw26I GTCTC 1 cut(s) 37
AlwI GGATC 2 cut(s) 797, 1172
Ama87I CYCGRG 1 cut(s) 448
AoxI GGCC 2 cut(s) 603, 639
ApeKI GCWGC 2 cut(s) 84, 440
ApoI RAATTY 4 cut(s) 46, 140, 509, 520
Asp700I GAANNNNTTC 2 cut(s) 60, 707
AspS9I GGNCC 2 cut(s) 473, 603
AsuHPI GGTGA 3 cut(s) 365, 378, 868
AvaI CYCGRG 1 cut(s) 448
AvaII GGWCC 1 cut(s) 473
BanII GRGCYC 1 cut(s) 507
Bbv12I GWGCWC 1 cut(s) 507
BbvI GCAGC 2 cut(s) 71, 427
BccI CCATC 4 cut(s) 580, 806, 889, 986
BciT130I CCWGG 1 cut(s) 945
BcoDI GTCTC 1 cut(s) 37
BcuI ACTAGT 2 cut(s) 725, 820
BfaI CTAG 5 cut(s) 468, 726, 774, 821, 1191
BfmI CTRYAG 2 cut(s) 441, 846
BfrI CTTAAG 1 cut(s) 458
BisI GCNGC 2 cut(s) 85, 441
BlpI GCTNAGC 1 cut(s) 210
BlsI GCNGC 2 cut(s) 86, 442
Bme1390I CCNGG 1 cut(s) 945
Bme18I GGWCC 1 cut(s) 473
BmeT110I CYCGRG 1 cut(s) 448
BmgT120I GGNCC 2 cut(s) 473, 603
BmiI GGNNCC 1 cut(s) 474
BmrFI CCNGG 1 cut(s) 945
BmsI GCATC 5 cut(s) 84, 284, 406, 901, 1017
BplI GAGNNNNNCTC 4 cut(s) 224, 256, 645, 677
BpmI CTGGAG 1 cut(s) 210
Bpu1102I GCTNAGC 1 cut(s) 210
BpuEI CTTGAG 1 cut(s) 1144
Bsa29I ATCGAT 1 cut(s) 584
BsaAI YACGTR 1 cut(s) 800
BsaXI ACNNNNNCTCC 2 cut(s) 651, 681
Bsc4I CCNNNNNNNGG 1 cut(s) 634
Bse1I ACTGG 1 cut(s) 118
BseBI CCWGG 1 cut(s) 945
BseCI ATCGAT 1 cut(s) 584
BseGI GGATG 4 cut(s) 372, 596, 817, 884
BseLI CCNNNNNNNGG 1 cut(s) 634
BseMII CTCAG 2 cut(s) 48, 201
BseNI ACTGG 1 cut(s) 118
BseRI GAGGAG 2 cut(s) 566, 1139
BseXI GCAGC 2 cut(s) 71, 427
BshFI GGCC 2 cut(s) 605, 641
BshVI ATCGAT 1 cut(s) 584
BsiHKAI GWGCWC 1 cut(s) 507
BsiHKCI CYCGRG 1 cut(s) 448
BslI CCNNNNNNNGG 1 cut(s) 634
BsmAI GTCTC 1 cut(s) 37
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 2 cut(s) 605, 641
BsoBI CYCGRG 1 cut(s) 448
Bsp1286I GDGCHC 1 cut(s) 507
Bsp143I GATC 3 cut(s) 789, 794, 1164
Bsp1720I GCTNAGC 1 cut(s) 210
BspANI GGCC 2 cut(s) 605, 641
BspCNI CTCAG 2 cut(s) 47, 202
BspDI ATCGAT 1 cut(s) 584
BspLI GGNNCC 1 cut(s) 474
BspMAI CTGCAG 1 cut(s) 445
BspPI GGATC 2 cut(s) 797, 1172
BspTI CTTAAG 1 cut(s) 458
BsrI ACTGG 1 cut(s) 118
BssMI GATC 3 cut(s) 789, 794, 1164
Bst2UI CCWGG 1 cut(s) 945
Bst4CI ACNGT 2 cut(s) 359, 426
Bst6I CTCTTC 2 cut(s) 961, 1116
BstAFI CTTAAG 1 cut(s) 458
BstBAI YACGTR 1 cut(s) 800
BstDEI CTNAG 8 cut(s) 34, 146, 210, 675, 928, 953, 1005, 1023
BstF5I GGATG 4 cut(s) 372, 596, 817, 884
BstKTI GATC 3 cut(s) 792, 797, 1167
BstMAI GTCTC 1 cut(s) 37
BstMBI GATC 3 cut(s) 789, 794, 1164
BstMWI GCNNNNNNNGC 1 cut(s) 272
BstNI CCWGG 1 cut(s) 945
BstNSI RCATGY 3 cut(s) 258, 1019, 1051
BstSCI CCNGG 1 cut(s) 943
BstSFI CTRYAG 2 cut(s) 441, 846
BstV1I GCAGC 2 cut(s) 71, 427
Bsu15I ATCGAT 1 cut(s) 584
BsuRI GGCC 2 cut(s) 605, 641
BsuTUI ATCGAT 1 cut(s) 584
BtsCI GGATG 4 cut(s) 372, 596, 817, 884
BtsIMutI CAGTG 1 cut(s) 828
Cfr13I GGNCC 2 cut(s) 473, 603
ClaI ATCGAT 1 cut(s) 584
Csp6I GTAC 3 cut(s) 407, 801, 1150
CspCI CAANNNNNGTGG 2 cut(s) 384, 419
CviAII CATG 7 cut(s) 185, 255, 290, 348, 514, 1016, 1048
CviQI GTAC 3 cut(s) 407, 801, 1150
DdeI CTNAG 8 cut(s) 34, 146, 210, 675, 928, 953, 1005, 1023
DpnI GATC 3 cut(s) 791, 796, 1166
DpnII GATC 3 cut(s) 789, 794, 1164
DraI TTTAAA 1 cut(s) 580
Eam1104I CTCTTC 2 cut(s) 961, 1116
EarI CTCTTC 2 cut(s) 961, 1116
Ecl136II GAGCTC 1 cut(s) 505
Eco24I GRGCYC 1 cut(s) 507
Eco47I GGWCC 1 cut(s) 473
Eco53kI GAGCTC 1 cut(s) 505
Eco57I CTGAAG 1 cut(s) 852
Eco88I CYCGRG 1 cut(s) 448
EcoICRI GAGCTC 1 cut(s) 505
EcoO109I RGGNCCY 1 cut(s) 603
EcoRII CCWGG 1 cut(s) 943
EcoT38I GRGCYC 1 cut(s) 507
FaeI CATG 7 cut(s) 188, 258, 293, 351, 517, 1019, 1051
FatI CATG 7 cut(s) 184, 254, 289, 347, 513, 1015, 1047
Fnu4HI GCNGC 2 cut(s) 85, 441
FokI GGATG 4 cut(s) 359, 603, 824, 871
FriOI GRGCYC 1 cut(s) 507
Fsp4HI GCNGC 2 cut(s) 85, 441
FspBI CTAG 5 cut(s) 468, 726, 774, 821, 1191
GluI GCNGC 2 cut(s) 85, 441
GsuI CTGGAG 1 cut(s) 210
HaeIII GGCC 2 cut(s) 605, 641
Hin1II CATG 7 cut(s) 188, 258, 293, 351, 517, 1019, 1051
HinfI GANTC 5 cut(s) 30, 434, 660, 666, 1105
HphI GGTGA 3 cut(s) 365, 378, 868
Hpy166II GTNNAC 2 cut(s) 818, 826
Hpy188I TCNGA 6 cut(s) 37, 111, 262, 665, 794, 1002
Hpy188III TCNNGA 5 cut(s) 53, 320, 332, 362, 774
Hpy8I GTNNAC 2 cut(s) 818, 826
HpyAV CCTTC 3 cut(s) 399, 559, 771
HpyCH4III ACNGT 2 cut(s) 359, 426
HpyCH4IV ACGT 1 cut(s) 799
HpyCH4V TGCA 8 cut(s) 8, 419, 443, 719, 1030, 1051, 1173, 1211
HpyF10VI GCNNNNNNNGC 1 cut(s) 272
HpyF3I CTNAG 8 cut(s) 34, 146, 210, 675, 928, 953, 1005, 1023
HpySE526I ACGT 1 cut(s) 799
Hsp92II CATG 7 cut(s) 188, 258, 293, 351, 517, 1019, 1051
Kzo9I GATC 3 cut(s) 789, 794, 1164
LmnI GCTCC 2 cut(s) 191, 502
Lsp1109I GCAGC 2 cut(s) 71, 427
LweI GCATC 5 cut(s) 84, 284, 406, 901, 1017
MaeI CTAG 5 cut(s) 468, 726, 774, 821, 1191
MaeII ACGT 1 cut(s) 799
MaeIII GTNAC 2 cut(s) 353, 426
MalI GATC 3 cut(s) 791, 796, 1166
MboI GATC 3 cut(s) 789, 794, 1164
MboII GAAGA 6 cut(s) 28, 425, 756, 920, 978, 1133
MhlI GDGCHC 1 cut(s) 507
MluCI AATT 9 cut(s) 46, 67, 140, 509, 520, 986, 1041, 1088, 1175
MlyI GAGTC 3 cut(s) 39, 654, 660
MmeI TCCRAC 5 cut(s) 151, 400, 500, 688, 694
MroXI GAANNNNTTC 2 cut(s) 60, 707
MseI TTAA 7 cut(s) 180, 341, 459, 579, 738, 780, 1044
MslI CAYNNNNRTG 1 cut(s) 111
MspA1I CMGCKG 1 cut(s) 440
MspCI CTTAAG 1 cut(s) 458
MspR9I CCNGG 1 cut(s) 945
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 1 cut(s) 945
MwoI GCNNNNNNNGC 1 cut(s) 272
NdeII GATC 3 cut(s) 789, 794, 1164
NlaIII CATG 7 cut(s) 188, 258, 293, 351, 517, 1019, 1051
NlaIV GGNNCC 1 cut(s) 474
NmuCI GTSAC 2 cut(s) 353, 426
NspI RCATGY 3 cut(s) 258, 1019, 1051
PcsI WCGNNNNNNNCGW 1 cut(s) 166
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 2 cut(s) 60, 707
PfeI GAWTC 2 cut(s) 434, 1105
PkrI GCNGC 2 cut(s) 86, 442
PleI GAGTC 3 cut(s) 38, 654, 660
PpsI GAGTC 3 cut(s) 38, 654, 660
Ppu21I YACGTR 1 cut(s) 800
Psp124BI GAGCTC 1 cut(s) 507
Psp6I CCWGG 1 cut(s) 943
PspGI CCWGG 1 cut(s) 943
PspN4I GGNNCC 1 cut(s) 474
PspPI GGNCC 2 cut(s) 473, 603
PstI CTGCAG 1 cut(s) 445
PvuII CAGCTG 1 cut(s) 440
RsaI GTAC 3 cut(s) 408, 802, 1151
RsaNI GTAC 3 cut(s) 407, 801, 1150
RseI CAYNNNNRTG 1 cut(s) 111
SacI GAGCTC 1 cut(s) 507
SaqAI TTAA 7 cut(s) 180, 341, 459, 579, 738, 780, 1044
SatI GCNGC 2 cut(s) 85, 441
Sau3AI GATC 3 cut(s) 789, 794, 1164
Sau96I GGNCC 2 cut(s) 473, 603
SchI GAGTC 3 cut(s) 39, 654, 660
ScrFI CCNGG 1 cut(s) 945
SduI GDGCHC 1 cut(s) 507
SfaNI GCATC 5 cut(s) 84, 284, 406, 901, 1017
SfcI CTRYAG 2 cut(s) 441, 846
SinI GGWCC 1 cut(s) 473
SmiI ATTTAAAT 1 cut(s) 580
SmiMI CAYNNNNRTG 1 cut(s) 111
SmlI CTYRAG 2 cut(s) 458, 1159
SmoI CTYRAG 2 cut(s) 458, 1159
SpeI ACTAGT 2 cut(s) 725, 820
Sse9I AATT 9 cut(s) 46, 67, 140, 509, 520, 986, 1041, 1088, 1175
SspMI CTAG 5 cut(s) 468, 726, 774, 821, 1191
SstI GAGCTC 1 cut(s) 507
StyD4I CCNGG 1 cut(s) 943
SwaI ATTTAAAT 1 cut(s) 580
TaaI ACNGT 2 cut(s) 359, 426
TaiI ACGT 1 cut(s) 802
TaqI TCGA 1 cut(s) 584
TasI AATT 9 cut(s) 46, 67, 140, 509, 520, 986, 1041, 1088, 1175
TfiI GAWTC 2 cut(s) 434, 1105
Tru1I TTAA 7 cut(s) 180, 341, 459, 579, 738, 780, 1044
Tru9I TTAA 7 cut(s) 180, 341, 459, 579, 738, 780, 1044
TscAI CASTG 1 cut(s) 835
TseFI GTSAC 2 cut(s) 353, 426
TseI GCWGC 2 cut(s) 84, 440
Tsp45I GTSAC 2 cut(s) 353, 426
TspDTI ATGAA 3 cut(s) 500, 502, 1215
TspGWI ACGGA 1 cut(s) 704
TspRI CASTG 1 cut(s) 835
Vha464I CTTAAG 1 cut(s) 458
VpaK11BI GGWCC 1 cut(s) 473
XapI RAATTY 4 cut(s) 46, 140, 509, 520
XbaI TCTAGA 1 cut(s) 773
XceI RCATGY 3 cut(s) 258, 1019, 1051
XcmI CCANNNNNNNNNTGG 3 cut(s) 191, 400, 985
XmnI GAANNNNTTC 2 cut(s) 60, 707
XspI CTAG 5 cut(s) 468, 726, 774, 821, 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.