Rmu_sc0004140.1_g000039

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004140.1
OG0000089
Physical Location & Seq
Forward (+)
153384 .. 157455
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004140.1_g000039.1.cds

Sequence Viewer

Length: 1725 bp
atggtccatctaccaattcatcttgtacaagaagttcttattggcggccccgtataccttcgttggatgttcccatttgaaaggtatgtgggtgtcttaaatcagcatgttaaaaatcgttctaaccccgaaggaagtatagcagaaaattatcttgctggagagattacacgcttttgtagtgggtacattaaacaagctactaatataggtcttcaacagaagcgtaatgatatttttgaagatgaaaccatattagaagggcaaccttttggtcagaaaaagacaaggcctttgacttctagtatgttagaaattgctcatcgttatgtgttggcaaatactacagaacttgattcatggaaagaattgcataaagatgagcttaggcttaatgatagacgtcttgcgaagaatgaacaccttctggaaaaaaaacatcagaacacttttagtgattggttggctaacatagttagatctggtgactgtggtgatatgtcaagtacagtgaggtggattgcatgtaagcctaaaaaagatgttttgtcatgttcaggctataagatcaatggaaatagatttcacactaaggaggctgagaaagtgacacaaaatagtggtgtatctattgaggcagacacaatgtgtcaagcaggtgcaagaggcaccttgcaaaggctggataagacctcaaaaaaaggtggtaagagaggaaaaaagcaacaacaaaggataaatgctgctgctattgctgtgaataggcaagaaagcaatccaccaataagaatatcggatgcagattctaattctcctgatatcatatcgcctactgtgacacctaatactccaaggtgtgaagatgagatggaaccagcaaattctaagaggcctcctaggggcaaggcaaagggagataaagactttaagaaaaaaggtagagttgaagttgaattcaatgctaggggtcaaccttatggggaatatgtagcagggttttcctccttccttggagtcacagcaagagagtttgttccaattacggttaagaattggaaagacctcacagatacttatagagaacaaatctggcaacatatcacgaaacaagtgaaaaagtacaaggaagaagaagaaacagtttctggaccgtcttctataaagaatgatgttgttgcaaaagtacttggtccagatccccgaggacgagtcagagggtatgggttcggtgcgctaacttcaaaagttgatgctcaactacatgtaagtaataaggtcacaatgttagagaatgctcttgctgctcaaacacaagtggtagacaaattgcaagagatggtgagaggcctttgtgctcggctagaccaaggaggaattaacaatgaacacactagtgcacaacaatctgttactgagattggaaatagaaaacgtaaagaaaatccaactgttagaagtactggtagtgatatagcacagagcaaacagaaagatgcaagtgttagaagttcttataatgagacagaaaatggcaggccaattcagcaaagttttaatggaaagaagcaacaagataaccccaaaaaggtccagaagacaggtttggggaaacaagtacagttgttaagttggtttgctaaagaagaagtagttgttgcaagtgctagtattatatcaaaagatccagaagttgaggtgcatcatgtgcctcttggccatgattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

574

Amino Acids

64.28

Weight (kDa)

9.36

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1515
AarI CACCTGC 1 cut(s) 647
AatII GACGTC 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 647
AccB1I GGYRCC 1 cut(s) 668
AccI GTMKAC 2 cut(s) 54, 1320
AciI CCGC 1 cut(s) 45
AclWI GGATC 2 cut(s) 1190, 1676
AcoI YGGCCR 1 cut(s) 1714
AcsI RAATTY 2 cut(s) 880, 953
AcyI GRCGYC 1 cut(s) 403
AdeI CACNNNGTG 1 cut(s) 648
AfaI GTAC 7 cut(s) 27, 188, 508, 1121, 1185, 1459, 1617
AfiI CCNNNNNNNGG 3 cut(s) 678, 899, 1585
AflIII ACRYGT 1 cut(s) 1261
AgsI TTSAA 7 cut(s) 80, 218, 242, 947, 953, 958, 1242
AhlI ACTAGT 1 cut(s) 1391
AjuI GAANNNNNNNTTGG 4 cut(s) 24, 56, 1586, 1618
AleI CACNNNNGTG 1 cut(s) 1392
AluBI AGCT 2 cut(s) 200, 385
AluI AGCT 2 cut(s) 200, 385
Alw21I GWGCWC 2 cut(s) 1357, 1399
Alw26I GTCTC 1 cut(s) 1514
Alw44I GTGCAC 1 cut(s) 1395
AlwI GGATC 2 cut(s) 1190, 1676
AlwNI CAGNNNCTG 1 cut(s) 1145
Ama87I CYCGRG 1 cut(s) 1200
AoxI GGCC 6 cut(s) 46, 290, 890, 1345, 1535, 1714
ApaLI GTGCAC 1 cut(s) 1395
ApeKI GCWGC 3 cut(s) 743, 746, 1301
ApoI RAATTY 2 cut(s) 880, 953
ArsI GACNNNNNNTTYG 2 cut(s) 277, 309
Asp700I GAANNNNTTC 1 cut(s) 423
AspA2I CCTAGG 1 cut(s) 896
AspLEI GCGC 1 cut(s) 1234
AspS9I GGNCC 5 cut(s) 4, 47, 1148, 1190, 1588
AsuHPI GGTGA 3 cut(s) 497, 506, 1351
AvaI CYCGRG 1 cut(s) 1200
AvaII GGWCC 4 cut(s) 4, 1148, 1190, 1588
AvrII CCTAGG 1 cut(s) 896
BaeGI GKGCMC 1 cut(s) 1399
BalI TGGCCA 1 cut(s) 1716
BanI GGYRCC 1 cut(s) 668
BbsI GAAGAC 3 cut(s) 206, 1146, 1601
Bbv12I GWGCWC 2 cut(s) 1357, 1399
BbvI GCAGC 3 cut(s) 730, 733, 1288
BccI CCATC 3 cut(s) 15, 862, 1330
BcoDI GTCTC 1 cut(s) 1514
BcuI ACTAGT 1 cut(s) 1391
BfaI CTAG 6 cut(s) 303, 897, 963, 1361, 1392, 1665
BfmI CTRYAG 1 cut(s) 345
BfuAI ACCTGC 1 cut(s) 647
BglII AGATCT 1 cut(s) 479
BisI GCNGC 4 cut(s) 46, 744, 747, 1302
BlnI CCTAGG 1 cut(s) 896
BlsI GCNGC 4 cut(s) 47, 745, 748, 1303
BmcAI AGTACT 2 cut(s) 1185, 1459
Bme18I GGWCC 4 cut(s) 4, 1148, 1190, 1588
BmeT110I CYCGRG 1 cut(s) 1200
BmgT120I GGNCC 5 cut(s) 4, 47, 1148, 1190, 1588
BmiI GGNNCC 3 cut(s) 49, 670, 873
BmsI GCATC 4 cut(s) 787, 1240, 1483, 1708
BpiI GAAGAC 3 cut(s) 206, 1146, 1601
BpmI CTGGAG 1 cut(s) 180
Bpu10I CCTNAGC 1 cut(s) 386
BsaHI GRCGYC 1 cut(s) 403
BsaJI CCNNGG 5 cut(s) 851, 896, 1009, 1201, 1366
Bsc4I CCNNNNNNNGG 3 cut(s) 678, 899, 1585
Bse1I ACTGG 1 cut(s) 1465
BseDI CCNNGG 5 cut(s) 851, 896, 1009, 1201, 1366
BseGI GGATG 2 cut(s) 72, 802
BseLI CCNNNNNNNGG 3 cut(s) 678, 899, 1585
BseMII CTCAG 2 cut(s) 591, 1404
BseNI ACTGG 1 cut(s) 1465
BseSI GKGCMC 1 cut(s) 1399
BseXI GCAGC 3 cut(s) 730, 733, 1288
BshFI GGCC 6 cut(s) 48, 292, 892, 1347, 1537, 1716
BshNI GGYRCC 1 cut(s) 668
BsiHKAI GWGCWC 2 cut(s) 1357, 1399
BsiHKCI CYCGRG 1 cut(s) 1200
BslI CCNNNNNNNGG 3 cut(s) 678, 899, 1585
BsmAI GTCTC 1 cut(s) 1514
BsmI GAATGC 1 cut(s) 1297
BsnI GGCC 6 cut(s) 48, 292, 892, 1347, 1537, 1716
BsoBI CYCGRG 1 cut(s) 1200
Bsp1286I GDGCHC 2 cut(s) 1357, 1399
Bsp1407I TGTACA 1 cut(s) 25
Bsp143I GATC 4 cut(s) 479, 567, 1195, 1681
BspACI CCGC 1 cut(s) 45
BspANI GGCC 6 cut(s) 48, 292, 892, 1347, 1537, 1716
BspCNI CTCAG 2 cut(s) 592, 1405
BspLI GGNNCC 3 cut(s) 49, 670, 873
BspMI ACCTGC 1 cut(s) 647
BspPI GGATC 2 cut(s) 1190, 1676
BspT107I GGYRCC 1 cut(s) 668
BsrGI TGTACA 1 cut(s) 25
BsrI ACTGG 1 cut(s) 1465
BssECI CCNNGG 5 cut(s) 851, 896, 1009, 1201, 1366
BssMI GATC 4 cut(s) 479, 567, 1195, 1681
BssNAI GTATAC 1 cut(s) 55
BssNI GRCGYC 1 cut(s) 403
BssT1I CCWWGG 4 cut(s) 851, 896, 1009, 1366
Bst1107I GTATAC 1 cut(s) 55
Bst4CI ACNGT 8 cut(s) 491, 511, 835, 1045, 1141, 1152, 1450, 1620
BstACI GRCGYC 1 cut(s) 403
BstAPI GCANNNNNTGC 1 cut(s) 1705
BstAUI TGTACA 1 cut(s) 25
BstC8I GCNNGC 1 cut(s) 1535
BstDEI CTNAG 5 cut(s) 386, 591, 600, 885, 1413
BstENI CCTNNNNNAGG 1 cut(s) 676
BstF5I GGATG 2 cut(s) 72, 802
BstHHI GCGC 1 cut(s) 1234
BstKTI GATC 4 cut(s) 482, 570, 1198, 1684
BstMAI GTCTC 1 cut(s) 1514
BstMBI GATC 4 cut(s) 479, 567, 1195, 1681
BstMWI GCNNNNNNNGC 4 cut(s) 752, 1301, 1543, 1705
BstNSI RCATGY 3 cut(s) 110, 528, 1265
BstSFI CTRYAG 1 cut(s) 345
BstSLI GKGCMC 1 cut(s) 1399
BstV1I GCAGC 3 cut(s) 730, 733, 1288
BstV2I GAAGAC 3 cut(s) 206, 1146, 1601
BstX2I RGATCY 3 cut(s) 479, 1195, 1681
BstYI RGATCY 3 cut(s) 479, 1195, 1681
BstZ17I GTATAC 1 cut(s) 55
BsuRI GGCC 6 cut(s) 48, 292, 892, 1347, 1537, 1716
BtsCI GGATG 2 cut(s) 72, 802
BtsIMutI CAGTG 1 cut(s) 516
BveI ACCTGC 1 cut(s) 647
Cac8I GCNNGC 1 cut(s) 1535
CaiI CAGNNNCTG 1 cut(s) 1145
CfoI GCGC 1 cut(s) 1234
Cfr13I GGNCC 5 cut(s) 4, 47, 1148, 1190, 1588
Csp6I GTAC 7 cut(s) 26, 187, 507, 1120, 1184, 1458, 1616
CviAII CATG 7 cut(s) 107, 360, 525, 552, 1262, 1703, 1718
CviQI GTAC 7 cut(s) 26, 187, 507, 1120, 1184, 1458, 1616
DdeI CTNAG 5 cut(s) 386, 591, 600, 885, 1413
DpnI GATC 4 cut(s) 481, 569, 1197, 1683
DpnII GATC 4 cut(s) 479, 567, 1195, 1681
DraIII CACNNNGTG 1 cut(s) 648
EaeI YGGCCR 1 cut(s) 1714
Eco130I CCWWGG 4 cut(s) 851, 896, 1009, 1366
Eco147I AGGCCT 3 cut(s) 292, 892, 1347
Eco32I GATATC 1 cut(s) 820
Eco47I GGWCC 4 cut(s) 4, 1148, 1190, 1588
Eco88I CYCGRG 1 cut(s) 1200
EcoNI CCTNNNNNAGG 1 cut(s) 676
EcoRI GAATTC 1 cut(s) 953
EcoRV GATATC 1 cut(s) 820
EcoT14I CCWWGG 4 cut(s) 851, 896, 1009, 1366
ErhI CCWWGG 4 cut(s) 851, 896, 1009, 1366
FaeI CATG 7 cut(s) 110, 363, 528, 555, 1265, 1706, 1721
FalI AAGNNNNNCTT 4 cut(s) 21, 53, 369, 401
FatI CATG 7 cut(s) 106, 359, 524, 551, 1261, 1702, 1717
FblI GTMKAC 2 cut(s) 54, 1320
Fnu4HI GCNGC 4 cut(s) 46, 744, 747, 1302
FokI GGATG 2 cut(s) 79, 809
Fsp4HI GCNGC 4 cut(s) 46, 744, 747, 1302
FspBI CTAG 6 cut(s) 303, 897, 963, 1361, 1392, 1665
GlaI GCGC 1 cut(s) 1233
GluI GCNGC 4 cut(s) 46, 744, 747, 1302
GsuI CTGGAG 1 cut(s) 180
HaeIII GGCC 6 cut(s) 48, 292, 892, 1347, 1537, 1716
HhaI GCGC 1 cut(s) 1234
Hin1I GRCGYC 1 cut(s) 403
Hin1II CATG 7 cut(s) 110, 363, 528, 555, 1265, 1706, 1721
Hin6I GCGC 1 cut(s) 1232
HinP1I GCGC 1 cut(s) 1232
HincII GTYRAC 1 cut(s) 971
HindII GTYRAC 1 cut(s) 971
HinfI GANTC 4 cut(s) 356, 803, 1014, 1209
HphI GGTGA 3 cut(s) 497, 506, 1351
Hpy166II GTNNAC 4 cut(s) 55, 971, 1321, 1397
Hpy188I TCNGA 4 cut(s) 279, 444, 796, 1214
Hpy188III TCNNGA 7 cut(s) 428, 815, 1102, 1146, 1193, 1591, 1685
Hpy8I GTNNAC 4 cut(s) 55, 971, 1321, 1397
HpyAV CCTTC 5 cut(s) 68, 125, 254, 434, 1015
HpyCH4III ACNGT 8 cut(s) 491, 511, 835, 1045, 1141, 1152, 1450, 1620
HpyCH4IV ACGT 2 cut(s) 403, 1432
HpyF10VI GCNNNNNNNGC 4 cut(s) 752, 1301, 1543, 1705
HpyF3I CTNAG 5 cut(s) 386, 591, 600, 885, 1413
HpySE526I ACGT 2 cut(s) 403, 1432
Hsp92I GRCGYC 1 cut(s) 403
Hsp92II CATG 7 cut(s) 110, 363, 528, 555, 1265, 1706, 1721
HspAI GCGC 1 cut(s) 1232
Kzo9I GATC 4 cut(s) 479, 567, 1195, 1681
Lsp1109I GCAGC 3 cut(s) 730, 733, 1288
LweI GCATC 4 cut(s) 787, 1240, 1483, 1708
MaeI CTAG 6 cut(s) 303, 897, 963, 1361, 1392, 1665
MaeII ACGT 2 cut(s) 403, 1432
MaeIII GTNAC 6 cut(s) 485, 607, 835, 1015, 1276, 1408
MalI GATC 4 cut(s) 481, 569, 1197, 1683
MboI GATC 4 cut(s) 479, 567, 1195, 1681
MflI RGATCY 3 cut(s) 479, 1195, 1681
MhlI GDGCHC 2 cut(s) 1357, 1399
MlsI TGGCCA 1 cut(s) 1716
MluNI TGGCCA 1 cut(s) 1716
MlyI GAGTC 2 cut(s) 1023, 1218
MmeI TCCRAC 2 cut(s) 44, 1469
Mox20I TGGCCA 1 cut(s) 1716
MroXI GAANNNNTTC 1 cut(s) 423
MscI TGGCCA 1 cut(s) 1716
MseI TTAA 9 cut(s) 98, 111, 192, 393, 927, 1047, 1377, 1554, 1625
MslI CAYNNNNRTG 3 cut(s) 327, 378, 1392
Msp20I TGGCCA 1 cut(s) 1716
Mva1269I GAATGC 1 cut(s) 1297
MwoI GCNNNNNNNGC 4 cut(s) 752, 1301, 1543, 1705
NdeII GATC 4 cut(s) 479, 567, 1195, 1681
NlaIII CATG 7 cut(s) 110, 363, 528, 555, 1265, 1706, 1721
NlaIV GGNNCC 3 cut(s) 49, 670, 873
NmeAIII GCCGAG 1 cut(s) 1336
NmuCI GTSAC 5 cut(s) 485, 607, 835, 1015, 1276
NspI RCATGY 3 cut(s) 110, 528, 1265
OliI CACNNNNGTG 1 cut(s) 1392
PaqCI CACCTGC 1 cut(s) 647
PceI AGGCCT 3 cut(s) 292, 892, 1347
PciI ACATGT 1 cut(s) 1261
PctI GAATGC 1 cut(s) 1297
PdmI GAANNNNTTC 1 cut(s) 423
PfeI GAWTC 2 cut(s) 356, 803
PkrI GCNGC 4 cut(s) 47, 745, 748, 1303
PleI GAGTC 2 cut(s) 1022, 1217
PpsI GAGTC 2 cut(s) 1022, 1217
PscI ACATGT 1 cut(s) 1261
PsiI TTATAA 1 cut(s) 1515
PspN4I GGNNCC 3 cut(s) 49, 670, 873
PspPI GGNCC 5 cut(s) 4, 47, 1148, 1190, 1588
PsrI GAACNNNNNNTAC 2 cut(s) 18, 50
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 3 cut(s) 479, 1195, 1681
RsaI GTAC 7 cut(s) 27, 188, 508, 1121, 1185, 1459, 1617
RsaNI GTAC 7 cut(s) 26, 187, 507, 1120, 1184, 1458, 1616
RseI CAYNNNNRTG 3 cut(s) 327, 378, 1392
SaqAI TTAA 9 cut(s) 98, 111, 192, 393, 927, 1047, 1377, 1554, 1625
SatI GCNGC 4 cut(s) 46, 744, 747, 1302
Sau3AI GATC 4 cut(s) 479, 567, 1195, 1681
Sau96I GGNCC 5 cut(s) 4, 47, 1148, 1190, 1588
ScaI AGTACT 2 cut(s) 1185, 1459
SchI GAGTC 2 cut(s) 1023, 1218
SduI GDGCHC 2 cut(s) 1357, 1399
SfaNI GCATC 4 cut(s) 787, 1240, 1483, 1708
SfcI CTRYAG 1 cut(s) 345
SinI GGWCC 4 cut(s) 4, 1148, 1190, 1588
SmiMI CAYNNNNRTG 3 cut(s) 327, 378, 1392
SpeI ACTAGT 1 cut(s) 1391
SseBI AGGCCT 3 cut(s) 292, 892, 1347
SsiI CCGC 1 cut(s) 45
SspMI CTAG 6 cut(s) 303, 897, 963, 1361, 1392, 1665
StuI AGGCCT 3 cut(s) 292, 892, 1347
StyI CCWWGG 4 cut(s) 851, 896, 1009, 1366
TaaI ACNGT 8 cut(s) 491, 511, 835, 1045, 1141, 1152, 1450, 1620
TaiI ACGT 2 cut(s) 406, 1435
TatI WGTACW 6 cut(s) 25, 506, 1119, 1183, 1457, 1615
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 2 cut(s) 356, 803
Tru1I TTAA 9 cut(s) 98, 111, 192, 393, 927, 1047, 1377, 1554, 1625
Tru9I TTAA 9 cut(s) 98, 111, 192, 393, 927, 1047, 1377, 1554, 1625
TscAI CASTG 1 cut(s) 516
TseFI GTSAC 5 cut(s) 485, 607, 835, 1015, 1276
TseI GCWGC 3 cut(s) 743, 746, 1301
Tsp45I GTSAC 5 cut(s) 485, 607, 835, 1015, 1276
TspDTI ATGAA 5 cut(s) 8, 261, 348, 432, 1398
TspRI CASTG 1 cut(s) 516
VneI GTGCAC 1 cut(s) 1395
VpaK11BI GGWCC 4 cut(s) 4, 1148, 1190, 1588
XagI CCTNNNNNAGG 1 cut(s) 676
XapI RAATTY 2 cut(s) 880, 953
XceI RCATGY 3 cut(s) 110, 528, 1265
XmaJI CCTAGG 1 cut(s) 896
XmiI GTMKAC 2 cut(s) 54, 1320
XmnI GAANNNNTTC 1 cut(s) 423
XspI CTAG 6 cut(s) 303, 897, 963, 1361, 1392, 1665
ZraI GACGTC 1 cut(s) 404
ZrmI AGTACT 2 cut(s) 1185, 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.