RLG00000007743

Transposase-associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000089
Physical Location & Seq
Reverse (-)
20577054 .. 20580974
3921 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007743

Sequence Viewer

Length: 1059 bp
ATGGAGTGTGAATATTCCAAGTTGAAAATGCAAGTGCTGGAAGAGATAGCTAATGAACAGGTTCAGCAGCTCATAAAGGAAGAAGCTGCATTGAAAAGTGATCAAGAGAAGAAAAAGAAAAAAGGTCAGCAAGGGAGCAATGTTGAAACACCAGCTACACCGCCAATTGAAGAAGCGGGTGAGATAGTTGTCAATGATGAACCAGCCGGTGAAGCTGCACTGAAAAGTGATCAAGAGAAGAAAAAGAAAAAAGGTCAGATAGAGAGCAATATTGAAACACCACAAACTGAACCGGTGATTGAAAGTTCACAAACAACTGAATCAACTAGTGAAACGCGCATGCTAGTTGAACCAAGTAATACAATTTATGAAGTTGATAAAACTTCAAATGAATTCTGGTACAAGGTCGTTGAAGGGGGGCGTATAATGCTGGATGAGGCAAGTATGGGGGATCCAGAAAGGATCCGCTGTCCTTGTAATAATTGTATAAGTTTCAAACGCCACAACTTTAATGTAGTATATGACCATCTGATCTGCTATGGGATAGATCCTCTTTATAGTAGGTGGACATGGCATGGGGATGAGCCAACATTGCCAGATGATAATGATAATATAGATTCAATGGAAGTGTGGCTGGATTTTGTAAAATCCAGAACCACAGAAGCATTTAGGAGTTTCGCATGTCTTGAAGAAGAGCTAAAGCACCAAAGTGAGACACCGGATGCAATATCAAGGTCTGATATTTGCCTTCGTGCCTATGAAGTGAAGAAAAAAGCAGGCAAAGAAGTTGAGGATCCGGAAATAGTGAAACTAGTACGAAAGTACAAGGAAGAAGAAGAAGTAACACAGCCATGTTCAATAAAAGCTGATGTTGTTGCAAAGGCACTTGGTCCTGACCCGCGAGGACGAGTTAGAGGGCTTGGGTTTGGTGCACTCCCTTCAAAAGTGGATGGTCAGACACACGTTGCTAATAAGGTTGCTTCTGTAGAAAATGATCCAGGTGGTGGAAGTGATGTTGAAACATCAGGACCTGTACATCCTCAAACCTTGAGGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transpos_assoc

Protein Analysis

353

Amino Acids

39.41

Weight (kDa)

4.89

Isoelectric Point (pI)

51.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transpos_assoc PF13963 148 - 193 4.8e-11 Transposase-associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1004
AccII CGCG 2 cut(s) 337, 901
AccIII TCCGGA 1 cut(s) 796
AciI CCGC 4 cut(s) 161, 176, 466, 899
AclWI GGATC 8 cut(s) 446, 457, 459, 470, 542, 788, 801, 989
AcsI RAATTY 1 cut(s) 392
AfaI GTAC 4 cut(s) 401, 816, 824, 1035
AfiI CCNNNNNNNGG 1 cut(s) 1004
AflIII ACRYGT 1 cut(s) 961
AgeI ACCGGT 1 cut(s) 292
AhlI ACTAGT 2 cut(s) 326, 811
AjnI CCWGG 1 cut(s) 997
AleI CACNNNNGTG 1 cut(s) 708
AluBI AGCT 7 cut(s) 50, 70, 86, 155, 215, 697, 866
AluI AGCT 7 cut(s) 50, 70, 86, 155, 215, 697, 866
Alw21I GWGCWC 1 cut(s) 934
Alw26I GTCTC 1 cut(s) 707
Alw44I GTGCAC 1 cut(s) 930
AlwI GGATC 8 cut(s) 446, 457, 459, 470, 542, 788, 801, 989
AlwNI CAGNNNCTG 1 cut(s) 1031
Aor13HI TCCGGA 1 cut(s) 796
ApaLI GTGCAC 1 cut(s) 930
ApeKI GCWGC 3 cut(s) 67, 86, 215
ApoI RAATTY 1 cut(s) 392
AsiGI ACCGGT 1 cut(s) 292
Asp700I GAANNNNTTC 1 cut(s) 60
AspLEI GCGC 1 cut(s) 339
AspS9I GGNCC 2 cut(s) 890, 1028
AsuHPI GGTGA 3 cut(s) 191, 221, 307
AvaII GGWCC 2 cut(s) 890, 1028
BaeGI GKGCMC 1 cut(s) 934
BamHI GGATCC 3 cut(s) 451, 462, 793
Bbv12I GWGCWC 1 cut(s) 934
BbvI GCAGC 3 cut(s) 73, 79, 202
BccI CCATC 2 cut(s) 534, 944
BciT130I CCWGG 1 cut(s) 999
BclI TGATCA 2 cut(s) 100, 229
BcoDI GTCTC 1 cut(s) 707
BcuI ACTAGT 2 cut(s) 326, 811
BfaI CTAG 3 cut(s) 327, 344, 812
BfmI CTRYAG 1 cut(s) 984
BisI GCNGC 3 cut(s) 68, 87, 216
BlsI GCNGC 3 cut(s) 69, 88, 217
Bme1390I CCNGG 1 cut(s) 999
Bme18I GGWCC 2 cut(s) 890, 1028
BmgT120I GGNCC 2 cut(s) 890, 1028
BmiI GGNNCC 3 cut(s) 453, 464, 795
BmrFI CCNGG 1 cut(s) 999
BmsI GCATC 1 cut(s) 712
BsaWI WCCGGW 3 cut(s) 292, 718, 796
Bsc4I CCNNNNNNNGG 1 cut(s) 1004
Bse118I RCCGGY 2 cut(s) 206, 292
Bse3DI GCAATG 2 cut(s) 145, 590
BseAI TCCGGA 1 cut(s) 796
BseBI CCWGG 1 cut(s) 999
BseGI GGATG 5 cut(s) 439, 586, 727, 955, 1036
BseLI CCNNNNNNNGG 1 cut(s) 1004
BseMI GCAATG 2 cut(s) 145, 590
BseSI GKGCMC 1 cut(s) 934
BseXI GCAGC 3 cut(s) 73, 79, 202
BsgI GTGCAG 1 cut(s) 201
Bsh1236I CGCG 2 cut(s) 337, 901
BshTI ACCGGT 1 cut(s) 292
BsiHKAI GWGCWC 1 cut(s) 934
BsiSI CCGG 4 cut(s) 207, 293, 719, 797
BslI CCNNNNNNNGG 1 cut(s) 1004
BsmAI GTCTC 1 cut(s) 707
Bsp1286I GDGCHC 1 cut(s) 934
Bsp13I TCCGGA 1 cut(s) 796
Bsp1407I TGTACA 1 cut(s) 1033
Bsp143I GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
BspACI CCGC 4 cut(s) 161, 176, 466, 899
BspEI TCCGGA 1 cut(s) 796
BspFNI CGCG 2 cut(s) 337, 901
BspLI GGNNCC 3 cut(s) 453, 464, 795
BspPI GGATC 8 cut(s) 446, 457, 459, 470, 542, 788, 801, 989
BspQI GCTCTTC 1 cut(s) 687
BsrDI GCAATG 2 cut(s) 145, 590
BsrFI RCCGGY 2 cut(s) 206, 292
BsrGI TGTACA 1 cut(s) 1033
BssAI RCCGGY 2 cut(s) 206, 292
BssMI GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
Bst2UI CCWGG 1 cut(s) 999
Bst6I CTCTTC 2 cut(s) 36, 687
BstAUI TGTACA 1 cut(s) 1033
BstC8I GCNNGC 2 cut(s) 341, 778
BstF5I GGATG 5 cut(s) 439, 586, 727, 955, 1036
BstFNI CGCG 2 cut(s) 337, 901
BstHHI GCGC 1 cut(s) 339
BstKTI GATC 8 cut(s) 103, 232, 454, 465, 534, 550, 796, 997
BstMAI GTCTC 1 cut(s) 707
BstMBI GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
BstMWI GCNNNNNNNGC 3 cut(s) 212, 427, 592
BstNI CCWGG 1 cut(s) 999
BstNSI RCATGY 2 cut(s) 343, 684
BstSCI CCNGG 1 cut(s) 997
BstSFI CTRYAG 1 cut(s) 984
BstSLI GKGCMC 1 cut(s) 934
BstUI CGCG 2 cut(s) 337, 901
BstV1I GCAGC 3 cut(s) 73, 79, 202
BstX2I RGATCY 4 cut(s) 451, 462, 547, 793
BstYI RGATCY 4 cut(s) 451, 462, 547, 793
BtsCI GGATG 5 cut(s) 439, 586, 727, 955, 1036
BtsIMutI CAGTG 1 cut(s) 218
Cac8I GCNNGC 2 cut(s) 341, 778
CaiI CAGNNNCTG 1 cut(s) 1031
CfoI GCGC 1 cut(s) 339
Cfr10I RCCGGY 2 cut(s) 206, 292
Cfr13I GGNCC 2 cut(s) 890, 1028
Csp6I GTAC 4 cut(s) 400, 815, 823, 1034
CspAI ACCGGT 1 cut(s) 292
CviAII CATG 5 cut(s) 340, 570, 575, 681, 852
CviQI GTAC 4 cut(s) 400, 815, 823, 1034
DpnI GATC 8 cut(s) 102, 231, 453, 464, 533, 549, 795, 996
DpnII GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
Eam1104I CTCTTC 2 cut(s) 36, 687
EarI CTCTTC 2 cut(s) 36, 687
Eco47I GGWCC 2 cut(s) 890, 1028
EcoO109I RGGNCCY 1 cut(s) 1028
EcoRI GAATTC 1 cut(s) 392
EcoRII CCWGG 1 cut(s) 997
FaeI CATG 5 cut(s) 343, 573, 578, 684, 855
FatI CATG 5 cut(s) 339, 569, 574, 680, 851
FauI CCCGC 2 cut(s) 169, 906
FbaI TGATCA 2 cut(s) 100, 229
Fnu4HI GCNGC 3 cut(s) 68, 87, 216
FokI GGATG 5 cut(s) 446, 593, 734, 962, 1023
Fsp4HI GCNGC 3 cut(s) 68, 87, 216
FspBI CTAG 3 cut(s) 327, 344, 812
GlaI GCGC 1 cut(s) 338
GluI GCNGC 3 cut(s) 68, 87, 216
HapII CCGG 4 cut(s) 207, 293, 719, 797
HhaI GCGC 1 cut(s) 339
Hin1II CATG 5 cut(s) 343, 573, 578, 684, 855
Hin6I GCGC 1 cut(s) 337
HinP1I GCGC 1 cut(s) 337
HinfI GANTC 2 cut(s) 320, 617
HpaII CCGG 4 cut(s) 207, 293, 719, 797
HphI GGTGA 3 cut(s) 191, 221, 307
Hpy166II GTNNAC 3 cut(s) 308, 567, 932
Hpy188I TCNGA 4 cut(s) 258, 531, 739, 957
Hpy188III TCNNGA 8 cut(s) 104, 233, 455, 651, 686, 797, 893, 1026
Hpy8I GTNNAC 3 cut(s) 308, 567, 932
HpyAV CCTTC 3 cut(s) 407, 758, 948
HpyCH4IV ACGT 1 cut(s) 963
HpyCH4V TGCA 6 cut(s) 31, 89, 218, 725, 878, 932
HpyF10VI GCNNNNNNNGC 3 cut(s) 212, 427, 592
HpySE526I ACGT 1 cut(s) 963
Hsp92II CATG 5 cut(s) 343, 573, 578, 684, 855
HspAI GCGC 1 cut(s) 337
Kpn2I TCCGGA 1 cut(s) 796
Ksp22I TGATCA 2 cut(s) 100, 229
Kzo9I GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
LguI GCTCTTC 1 cut(s) 687
LmnI GCTCC 1 cut(s) 135
Lsp1109I GCAGC 3 cut(s) 73, 79, 202
LweI GCATC 1 cut(s) 712
MaeI CTAG 3 cut(s) 327, 344, 812
MaeII ACGT 1 cut(s) 963
MaeIII GTNAC 1 cut(s) 841
MalI GATC 8 cut(s) 102, 231, 453, 464, 533, 549, 795, 996
MboI GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
MfeI CAATTG 1 cut(s) 165
MflI RGATCY 4 cut(s) 451, 462, 547, 793
MhlI GDGCHC 1 cut(s) 934
MluCI AATT 4 cut(s) 165, 363, 392, 481
MnlI CCTC 7 cut(s) 430, 561, 784, 896, 908, 1044, 1050
MroI TCCGGA 1 cut(s) 796
MroXI GAANNNNTTC 1 cut(s) 60
MseI TTAA 1 cut(s) 510
MslI CAYNNNNRTG 3 cut(s) 579, 708, 850
MspA1I CMGCKG 1 cut(s) 468
MspI CCGG 4 cut(s) 207, 293, 719, 797
MspR9I CCNGG 1 cut(s) 999
MunI CAATTG 1 cut(s) 165
MvaI CCWGG 1 cut(s) 999
MvnI CGCG 2 cut(s) 337, 901
MwoI GCNNNNNNNGC 3 cut(s) 212, 427, 592
NdeII GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
NlaIII CATG 5 cut(s) 343, 573, 578, 684, 855
NlaIV GGNNCC 3 cut(s) 453, 464, 795
NspI RCATGY 2 cut(s) 343, 684
OliI CACNNNNGTG 1 cut(s) 708
PaeI GCATGC 1 cut(s) 343
PciSI GCTCTTC 1 cut(s) 687
PdmI GAANNNNTTC 1 cut(s) 60
PfeI GAWTC 2 cut(s) 320, 617
PflMI CCANNNNNTGG 1 cut(s) 1004
PinAI ACCGGT 1 cut(s) 292
PkrI GCNGC 3 cut(s) 69, 88, 217
PpuMI RGGWCCY 1 cut(s) 1028
Psp5II RGGWCCY 1 cut(s) 1028
Psp6I CCWGG 1 cut(s) 997
PspGI CCWGG 1 cut(s) 997
PspN4I GGNNCC 3 cut(s) 453, 464, 795
PspPI GGNCC 2 cut(s) 890, 1028
PspPPI RGGWCCY 1 cut(s) 1028
PstNI CAGNNNCTG 1 cut(s) 1031
PsuI RGATCY 4 cut(s) 451, 462, 547, 793
RsaI GTAC 4 cut(s) 401, 816, 824, 1035
RsaNI GTAC 4 cut(s) 400, 815, 823, 1034
RseI CAYNNNNRTG 3 cut(s) 579, 708, 850
SapI GCTCTTC 1 cut(s) 687
SaqAI TTAA 1 cut(s) 510
SatI GCNGC 3 cut(s) 68, 87, 216
Sau3AI GATC 8 cut(s) 100, 229, 451, 462, 531, 547, 793, 994
Sau96I GGNCC 2 cut(s) 890, 1028
ScrFI CCNGG 1 cut(s) 999
SduI GDGCHC 1 cut(s) 934
SfaNI GCATC 1 cut(s) 712
SfcI CTRYAG 1 cut(s) 984
SinI GGWCC 2 cut(s) 890, 1028
SmiMI CAYNNNNRTG 3 cut(s) 579, 708, 850
SmlI CTYRAG 1 cut(s) 1048
SmoI CTYRAG 1 cut(s) 1048
SpeI ACTAGT 2 cut(s) 326, 811
SphI GCATGC 1 cut(s) 343
Sse9I AATT 4 cut(s) 165, 363, 392, 481
SsiI CCGC 4 cut(s) 161, 176, 466, 899
SspI AATATT 2 cut(s) 14, 271
SspMI CTAG 3 cut(s) 327, 344, 812
StyD4I CCNGG 1 cut(s) 997
TaiI ACGT 1 cut(s) 966
TasI AATT 4 cut(s) 165, 363, 392, 481
TatI WGTACW 2 cut(s) 822, 1033
TfiI GAWTC 2 cut(s) 320, 617
Tru1I TTAA 1 cut(s) 510
Tru9I TTAA 1 cut(s) 510
TscAI CASTG 1 cut(s) 225
TseI GCWGC 3 cut(s) 67, 86, 215
TspDTI ATGAA 5 cut(s) 69, 213, 384, 405, 774
TspRI CASTG 1 cut(s) 225
Van91I CCANNNNNTGG 1 cut(s) 1004
VneI GTGCAC 1 cut(s) 930
VpaK11BI GGWCC 2 cut(s) 890, 1028
XapI RAATTY 1 cut(s) 392
XceI RCATGY 2 cut(s) 343, 684
XmnI GAANNNNTTC 1 cut(s) 60
XspI CTAG 3 cut(s) 327, 344, 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.