FvH4_1g29233

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000089
Physical Location & Seq
Forward (+)
22047192 .. 22049010
1819 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29233.t1

Sequence Viewer

Length: 942 bp
ATGAAAAATGAAGTCTGGGATCTTTTGATGAACAAATATAAGGCGGATCTTGCTCATAAGACATTCATCCTACAACAAATGGGAAGGTTATGGAGATCATACAAATCTGAACTCTCCACTAGCATTAGTAGAGTTATAGATTCTCGAACCACTAAGACAGAATCTTCACGGCTACTTAGCATGCTTAAACCCTCTGATGTGTCACAGAATGAGTGGGATATGTTTGTGGCAGAACGTCGATTAGCGGAATGGAAAGAAAAGAGCGAGAAAATGAAGATAATCAGGGGTAAACAGCTTCATCCTCACACACTGAGCCGAAAAGGTTATGCAAGATACGAGTATGACTGGAATACGAACAATCCTGGAAAGCGGTTGTACAAGACAAAGTTATTTATCCATGGCCACGAGCAGAAGAAGAAGATCAAAAATGTTCAGATGGCTGCCACAATGGCTGAGCTACAAAAAAAACTTGATGAGCAACCGCCGAATAAAGGGTCTATTCTTATAAAGTTTGATGTATTGAGTCAAGTTCTTGGTAAGGAGAAAAGTGGTCGTGTTAGAGGTATGGGAGCAGGTGTTACACCTTCGAGGGTAGATGCTCAGATACAAAGTGCCTCCTGGAAAAATTCATTGGAGGAAAAACTTGAGGCGAACTGCATGCGAGTGTACAAAGCTTCTCGAGAGGGGCCTGAAAATGGTGAAGTAGGAATTCACTCTAGCCCTCAGATTGAAACTTCTAAGTCAGTACAAGAAAGCACCCTTTGTGTCAATGATCTGTGTGAAGTGCTCGATTGGGAGGGCACAGGTTTAGTTGTGGCTAGAGGAAAGATTTCAGCAGTTGACCCAACTACAAAAGTGCATGGCTACAATCTTGGACATGACTGTTATAGAGTTGTTGTTGAGGAAGCTGTCGTTCTTAGAGCTGAATTCTATCGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

314

Amino Acids

35.77

Weight (kDa)

9.44

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 71 - 195 2.7e-14 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 506
AarI CACCTGC 1 cut(s) 563
Acc36I ACCTGC 1 cut(s) 563
AciI CCGC 4 cut(s) 44, 245, 370, 482
AclWI GGATC 2 cut(s) 27, 54
AcoI YGGCCR 1 cut(s) 400
AcsI RAATTY 3 cut(s) 625, 708, 926
AfaI GTAC 3 cut(s) 377, 668, 747
AfiI CCNNNNNNNGG 2 cut(s) 491, 695
AgsI TTSAA 1 cut(s) 731
AjnI CCWGG 2 cut(s) 361, 617
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AluBI AGCT 5 cut(s) 295, 457, 674, 908, 923
AluI AGCT 5 cut(s) 295, 457, 674, 908, 923
Alw21I GWGCWC 1 cut(s) 789
AlwI GGATC 2 cut(s) 27, 54
Ama87I CYCGRG 1 cut(s) 678
AoxI GGCC 2 cut(s) 400, 686
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 3 cut(s) 625, 708, 926
ArsI GACNNNNNNTTYG 2 cut(s) 479, 511
Asp700I GAANNNNTTC 1 cut(s) 829
AspS9I GGNCC 1 cut(s) 686
AsuHPI GGTGA 1 cut(s) 710
AvaI CYCGRG 1 cut(s) 678
BaeGI GKGCMC 1 cut(s) 803
BalI TGGCCA 1 cut(s) 402
BauI CACGAG 1 cut(s) 404
Bbv12I GWGCWC 1 cut(s) 789
BbvI GCAGC 1 cut(s) 427
BccI CCATC 1 cut(s) 430
BceAI ACGGC 1 cut(s) 185
BcgI CGANNNNNNTGC 2 cut(s) 640, 674
BciT130I CCWGG 2 cut(s) 363, 619
BfaI CTAG 3 cut(s) 120, 717, 819
BfuAI ACCTGC 1 cut(s) 563
BglI GCCNNNNNGGC 1 cut(s) 449
BisI GCNGC 1 cut(s) 441
BlpI GCTNAGC 1 cut(s) 453
BlsI GCNGC 1 cut(s) 442
Bme1390I CCNGG 2 cut(s) 363, 619
BmeT110I CYCGRG 1 cut(s) 678
BmgT120I GGNCC 1 cut(s) 686
BmiI GGNNCC 1 cut(s) 687
BmrFI CCNGG 2 cut(s) 363, 619
BmsI GCATC 1 cut(s) 586
Bpu1102I GCTNAGC 1 cut(s) 453
BpuEI CTTGAG 1 cut(s) 665
BsaJI CCNNGG 1 cut(s) 397
BsaXI ACNNNNNCTCC 2 cut(s) 561, 591
Bsc4I CCNNNNNNNGG 2 cut(s) 491, 695
Bse1I ACTGG 1 cut(s) 350
BseBI CCWGG 2 cut(s) 363, 619
BseDI CCNNGG 1 cut(s) 397
BseGI GGATG 2 cut(s) 66, 298
BseLI CCNNNNNNNGG 2 cut(s) 491, 695
BseMII CTCAG 4 cut(s) 302, 444, 614, 737
BseNI ACTGG 1 cut(s) 350
BseSI GKGCMC 1 cut(s) 803
BseXI GCAGC 1 cut(s) 427
BshFI GGCC 2 cut(s) 402, 688
BsiHKAI GWGCWC 1 cut(s) 789
BsiHKCI CYCGRG 1 cut(s) 678
BslFI GGGAC 1 cut(s) 921
BslI CCNNNNNNNGG 2 cut(s) 491, 695
BsmFI GGGAC 1 cut(s) 921
BsnI GGCC 2 cut(s) 402, 688
BsoBI CYCGRG 1 cut(s) 678
Bsp1286I GDGCHC 2 cut(s) 789, 803
Bsp1407I TGTACA 2 cut(s) 375, 666
Bsp143I GATC 5 cut(s) 19, 46, 95, 420, 772
Bsp1720I GCTNAGC 1 cut(s) 453
Bsp19I CCATGG 1 cut(s) 397
BspACI CCGC 4 cut(s) 44, 245, 370, 482
BspANI GGCC 2 cut(s) 402, 688
BspCNI CTCAG 4 cut(s) 303, 445, 613, 736
BspLI GGNNCC 1 cut(s) 687
BspMI ACCTGC 1 cut(s) 563
BspPI GGATC 2 cut(s) 27, 54
BsrGI TGTACA 2 cut(s) 375, 666
BsrI ACTGG 1 cut(s) 350
BssECI CCNNGG 1 cut(s) 397
BssMI GATC 5 cut(s) 19, 46, 95, 420, 772
BssSI CACGAG 1 cut(s) 404
BssT1I CCWWGG 1 cut(s) 397
Bst2BI CACGAG 1 cut(s) 404
Bst2UI CCWGG 2 cut(s) 363, 619
Bst4CI ACNGT 1 cut(s) 884
BstAUI TGTACA 2 cut(s) 375, 666
BstC8I GCNNGC 2 cut(s) 182, 659
BstDEI CTNAG 8 cut(s) 153, 176, 311, 453, 600, 723, 738, 917
BstDSI CCRYGG 1 cut(s) 397
BstF5I GGATG 2 cut(s) 66, 298
BstKTI GATC 5 cut(s) 22, 49, 98, 423, 775
BstMBI GATC 5 cut(s) 19, 46, 95, 420, 772
BstMWI GCNNNNNNNGC 2 cut(s) 50, 449
BstNI CCWGG 2 cut(s) 363, 619
BstNSI RCATGY 2 cut(s) 184, 661
BstSCI CCNGG 2 cut(s) 361, 617
BstSLI GKGCMC 1 cut(s) 803
BstV1I GCAGC 1 cut(s) 427
BstX2I RGATCY 2 cut(s) 19, 46
BstYI RGATCY 2 cut(s) 19, 46
BsuRI GGCC 2 cut(s) 402, 688
BtgI CCRYGG 1 cut(s) 397
BtsCI GGATG 2 cut(s) 66, 298
BtsIMutI CAGTG 1 cut(s) 308
BveI ACCTGC 1 cut(s) 563
Cac8I GCNNGC 2 cut(s) 182, 659
Cfr13I GGNCC 1 cut(s) 686
Csp6I GTAC 3 cut(s) 376, 667, 746
CviAII CATG 5 cut(s) 181, 398, 658, 860, 878
CviQI GTAC 3 cut(s) 376, 667, 746
DdeI CTNAG 8 cut(s) 153, 176, 311, 453, 600, 723, 738, 917
DpnI GATC 5 cut(s) 21, 48, 97, 422, 774
DpnII GATC 5 cut(s) 19, 46, 95, 420, 772
EaeI YGGCCR 1 cut(s) 400
EciI GGCGGA 1 cut(s) 59
Eco130I CCWWGG 1 cut(s) 397
Eco88I CYCGRG 1 cut(s) 678
EcoO109I RGGNCCY 1 cut(s) 686
EcoRI GAATTC 2 cut(s) 708, 926
EcoRII CCWGG 2 cut(s) 361, 617
EcoT14I CCWWGG 1 cut(s) 397
ErhI CCWWGG 1 cut(s) 397
FaeI CATG 5 cut(s) 184, 401, 661, 863, 881
FaqI GGGAC 1 cut(s) 921
FatI CATG 5 cut(s) 180, 397, 657, 859, 877
Fnu4HI GCNGC 1 cut(s) 441
FokI GGATG 2 cut(s) 53, 285
Fsp4HI GCNGC 1 cut(s) 441
FspBI CTAG 3 cut(s) 120, 717, 819
GluI GCNGC 1 cut(s) 441
HaeIII GGCC 2 cut(s) 402, 688
Hin1II CATG 5 cut(s) 184, 401, 661, 863, 881
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HindIII AAGCTT 1 cut(s) 672
HinfI GANTC 3 cut(s) 140, 161, 523
HphI GGTGA 1 cut(s) 710
Hpy166II GTNNAC 3 cut(s) 290, 667, 841
Hpy188I TCNGA 5 cut(s) 109, 196, 435, 603, 726
Hpy188III TCNNGA 3 cut(s) 144, 678, 680
Hpy8I GTNNAC 3 cut(s) 290, 667, 841
Hpy99I CGWCG 1 cut(s) 240
HpyAV CCTTC 2 cut(s) 78, 594
HpyCH4III ACNGT 1 cut(s) 884
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 3 cut(s) 329, 657, 859
HpyF10VI GCNNNNNNNGC 2 cut(s) 50, 449
HpyF3I CTNAG 8 cut(s) 153, 176, 311, 453, 600, 723, 738, 917
HpySE526I ACGT 1 cut(s) 235
Hsp92II CATG 5 cut(s) 184, 401, 661, 863, 881
Kzo9I GATC 5 cut(s) 19, 46, 95, 420, 772
LmnI GCTCC 1 cut(s) 569
LpnPI CCDG 9 cut(s) 268, 331, 348, 375, 558, 604, 631, 702, 789
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 1 cut(s) 586
MaeI CTAG 3 cut(s) 120, 717, 819
MaeII ACGT 1 cut(s) 235
MaeIII GTNAC 2 cut(s) 201, 577
MalI GATC 5 cut(s) 21, 48, 97, 422, 774
MboI GATC 5 cut(s) 19, 46, 95, 420, 772
MboII GAAGA 5 cut(s) 156, 286, 424, 427, 430
MflI RGATCY 2 cut(s) 19, 46
MhlI GDGCHC 2 cut(s) 789, 803
MlsI TGGCCA 1 cut(s) 402
MluCI AATT 3 cut(s) 625, 708, 926
MluNI TGGCCA 1 cut(s) 402
MlyI GAGTC 1 cut(s) 532
Mox20I TGGCCA 1 cut(s) 402
MroXI GAANNNNTTC 1 cut(s) 829
MscI TGGCCA 1 cut(s) 402
MseI TTAA 1 cut(s) 186
MslI CAYNNNNRTG 1 cut(s) 662
Msp20I TGGCCA 1 cut(s) 402
MspR9I CCNGG 2 cut(s) 363, 619
MvaI CCWGG 2 cut(s) 363, 619
MwoI GCNNNNNNNGC 2 cut(s) 50, 449
NcoI CCATGG 1 cut(s) 397
NdeII GATC 5 cut(s) 19, 46, 95, 420, 772
NlaIII CATG 5 cut(s) 184, 401, 661, 863, 881
NlaIV GGNNCC 1 cut(s) 687
NmuCI GTSAC 1 cut(s) 201
NspI RCATGY 2 cut(s) 184, 661
PaeI GCATGC 2 cut(s) 184, 661
PaeR7I CTCGAG 1 cut(s) 678
PaqCI CACCTGC 1 cut(s) 563
PdmI GAANNNNTTC 1 cut(s) 829
PfeI GAWTC 2 cut(s) 140, 161
PfoI TCCNGGA 2 cut(s) 361, 617
PkrI GCNGC 1 cut(s) 442
PleI GAGTC 1 cut(s) 531
PpsI GAGTC 1 cut(s) 531
PsiI TTATAA 1 cut(s) 506
Psp6I CCWGG 2 cut(s) 361, 617
PspGI CCWGG 2 cut(s) 361, 617
PspN4I GGNNCC 1 cut(s) 687
PspPI GGNCC 1 cut(s) 686
PsuI RGATCY 2 cut(s) 19, 46
RsaI GTAC 3 cut(s) 377, 668, 747
RsaNI GTAC 3 cut(s) 376, 667, 746
RseI CAYNNNNRTG 1 cut(s) 662
SaqAI TTAA 1 cut(s) 186
SatI GCNGC 1 cut(s) 441
Sau3AI GATC 5 cut(s) 19, 46, 95, 420, 772
Sau96I GGNCC 1 cut(s) 686
SchI GAGTC 1 cut(s) 532
ScrFI CCNGG 2 cut(s) 363, 619
SduI GDGCHC 2 cut(s) 789, 803
SfaNI GCATC 1 cut(s) 586
Sfr274I CTCGAG 1 cut(s) 678
SlaI CTCGAG 1 cut(s) 678
SmiMI CAYNNNNRTG 1 cut(s) 662
SmlI CTYRAG 2 cut(s) 644, 678
SmoI CTYRAG 2 cut(s) 644, 678
SphI GCATGC 2 cut(s) 184, 661
Sse9I AATT 3 cut(s) 625, 708, 926
SsiI CCGC 4 cut(s) 44, 245, 370, 482
SspMI CTAG 3 cut(s) 120, 717, 819
StyD4I CCNGG 2 cut(s) 361, 617
StyI CCWWGG 1 cut(s) 397
TaaI ACNGT 1 cut(s) 884
TaiI ACGT 1 cut(s) 238
TaqI TCGA 5 cut(s) 145, 238, 587, 679, 789
TasI AATT 3 cut(s) 625, 708, 926
TatI WGTACW 3 cut(s) 375, 666, 745
TfiI GAWTC 2 cut(s) 140, 161
Tru1I TTAA 1 cut(s) 186
Tru9I TTAA 1 cut(s) 186
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 1 cut(s) 201
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 1 cut(s) 201
TspDTI ATGAA 7 cut(s) 17, 24, 44, 55, 287, 287, 618
TspRI CASTG 1 cut(s) 315
XapI RAATTY 3 cut(s) 625, 708, 926
XceI RCATGY 2 cut(s) 184, 661
XhoI CTCGAG 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 829
XspI CTAG 3 cut(s) 120, 717, 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.