RchiOBHm_Chr3g0496631

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000089
Physical Location & Seq
Forward (+)
47852482 .. 47854727
2246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45894

Sequence Viewer

Length: 1416 bp
ATGGTGGTATCACATACAGGCTTCATCATCAATGGAAACCGATTTCAAACTGAGGCCAGTGAGAAGAGCACACAAAATAGTGGTGTTTTTGTTGAAGGAGACACTATGTGTCGGGCAAGTGCAAGGGATAATTTTCAGAAGATGGATAGAGTATCCTACTATGGTGTTATAAGAGATATAGTTCTGCTAGACTACCGCCAATTTAAGGTTCCCCTATTTGATTGTTATTGGGCTAATATAGGGACCGGTGTCAAATTTGAAGATGGTTTTACATTAGTGAACCTCCACAAGGGGCAGCATCAGTTTGATAGAGATCCGTTTATTTTTGCTTCCCAAGCGAAACAGATTTTTTATTCAAGAGAGAGTGACACTTCGAATTGGCATGTTGTACTCAAAGCACCGCCAAGAGGGTTTTTTGAGAATGATAGTGATGAAAGTGCTTACATGCCAGTAGATGTATCACAGCTAGACCTCGACGTTGAGGATGAAGAATGTGAGAGATATGATAATGAGGAAATCAATTCGACCTCAAAACAAGGTGGAAAGAAAGCCAAAAGGCAGGAATCAGCTGCACGAGCAGCTCTTGTGCTTGGGGAAAAAAGGAATGAATCCTTGAGAATATCTAATGGAAATTCAAATTCATCCCCTATAGAAGCTGATATTCCGGAATGTCAAGCTACATCAAACTCAGAAAAGAAAAAAATTCCACCTCGGGGTAAAGCCAAATTGTTGGATATTGCCAAAAAAAAAAGGAAACTTCCTATTGTAGTTGAATTCAATGAAAGAGGCCAGCCCATTGGAGAAAATGCAGGTATATTCTCTTCTTTCATTGGAGCCTCAGCAAGAGAACTAATACCAATGACCGCTGGAACTTGGAAAGATCTATCTAATACTTTCAAAGATCAGATTTGGAAACACGTCACAACAACTTTCGTTGTTGATGAATTCTACAAGAAGCATATTTTTCGAAGGATGACGAAACTTTGGCGAGATAATAGATCTTTAGTGATGAAAGAAGTGGAAGAGCAAGCCAAAGTTGTTGGTTTACAGCGTGCTGCGGCCTTTCTCAAGCCTAATAACATAGAATCCATGGATGAGTGGTTAGCTCTTATTAAACACAGAACTAGTGTGGGATTTAAGGAGAAGTGTCAAAAATTCAAGAGAATGCGGGCAGGAAGAACTTTACTACATAGAACTAGTAGAAAAAGTTTCGCGCGCCTTGAAGAAGAATTGAGGGAACAAAGTGAAAATCCAGATGCGATATCAAGGTCTGATATATGGATACATGCTTATGAAGCAAAGAAGAAGAAGAGTTCAGATGAAGTAGTTGAGGATCCGGAAATAGTGGTCTGTATACTCTTCTTTATGGCTCATCTTTTGGTTTTTTTTTCTTTCCCTAATCAGTTATGTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

471

Amino Acids

54.06

Weight (kDa)

8.62

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4216 PF13952 63 - 130 6e-13 Domain of unknown function (DUF4216)
Transposase_24 PF03004 365 - 443 3.4e-08 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 170
Acc36I ACCTGC 1 cut(s) 800
AccI GTMKAC 1 cut(s) 1354
AccII CGCG 2 cut(s) 1214, 1216
AccIII TCCGGA 2 cut(s) 664, 1336
AciI CCGC 5 cut(s) 196, 401, 864, 1058, 1168
AclWI GGATC 3 cut(s) 308, 1328, 1341
AcsI RAATTY 7 cut(s) 254, 631, 637, 702, 773, 944, 1154
AdeI CACNNNGTG 1 cut(s) 108
AfaI GTAC 1 cut(s) 390
AfiI CCNNNNNNNGG 4 cut(s) 205, 289, 407, 713
AflIII ACRYGT 1 cut(s) 916
AgeI ACCGGT 1 cut(s) 245
AhlI ACTAGT 2 cut(s) 1124, 1196
AjiI CACGTC 1 cut(s) 919
AjuI GAANNNNNNNTTGG 2 cut(s) 192, 224
AluBI AGCT 6 cut(s) 466, 569, 581, 656, 677, 1106
AluI AGCT 6 cut(s) 466, 569, 581, 656, 677, 1106
Alw21I GWGCWC 1 cut(s) 71
Alw26I GTCTC 1 cut(s) 93
AlwI GGATC 3 cut(s) 308, 1328, 1341
Ama87I CYCGRG 1 cut(s) 711
Aor13HI TCCGGA 2 cut(s) 664, 1336
AoxI GGCC 3 cut(s) 54, 787, 1059
ApeKI GCWGC 4 cut(s) 295, 569, 578, 1055
ApoI RAATTY 7 cut(s) 254, 631, 637, 702, 773, 944, 1154
AsiGI ACCGGT 1 cut(s) 245
AspLEI GCGC 2 cut(s) 1216, 1218
AspS9I GGNCC 1 cut(s) 243
AsuII TTCGAA 2 cut(s) 374, 967
AvaI CYCGRG 1 cut(s) 711
AvaII GGWCC 1 cut(s) 243
BamHI GGATCC 1 cut(s) 1333
BarI GAAGNNNNNNTAC 2 cut(s) 805, 837
BauI CACGAG 1 cut(s) 573
Bbv12I GWGCWC 1 cut(s) 71
BbvCI CCTCAGC 1 cut(s) 838
BbvI GCAGC 4 cut(s) 307, 556, 590, 1042
BccI CCATC 2 cut(s) 136, 257
BcgI CGANNNNNNTGC 2 cut(s) 947, 981
BciVI GTATCC 2 cut(s) 163, 1275
BcoDI GTCTC 1 cut(s) 93
BcuI ACTAGT 2 cut(s) 1124, 1196
BfaI CTAG 4 cut(s) 188, 467, 1125, 1197
BfmI CTRYAG 1 cut(s) 648
BfuAI ACCTGC 1 cut(s) 800
BfuI GTATCC 2 cut(s) 163, 1275
BglII AGATCT 2 cut(s) 880, 998
BisI GCNGC 5 cut(s) 296, 570, 579, 1056, 1059
BlsI GCNGC 5 cut(s) 297, 571, 580, 1057, 1060
Bme18I GGWCC 1 cut(s) 243
BmeT110I CYCGRG 1 cut(s) 711
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 1 cut(s) 243
BmiI GGNNCC 4 cut(s) 210, 244, 835, 1335
BmsI GCATC 2 cut(s) 307, 1246
BoxI GACNNNNGTC 1 cut(s) 248
Bpu10I CCTNAGC 1 cut(s) 838
Bpu14I TTCGAA 2 cut(s) 374, 967
BpuEI CTTGAG 2 cut(s) 634, 1052
BsaBI GATNNNNATC 1 cut(s) 312
BsaJI CCNNGG 2 cut(s) 710, 1089
BsaWI WCCGGW 3 cut(s) 245, 664, 1336
Bsc4I CCNNNNNNNGG 4 cut(s) 205, 289, 407, 713
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 2 cut(s) 57, 449
Bse8I GATNNNNATC 1 cut(s) 312
BseAI TCCGGA 2 cut(s) 664, 1336
BseDI CCNNGG 2 cut(s) 710, 1089
BseGI GGATG 4 cut(s) 490, 641, 978, 1099
BseJI GATNNNNATC 1 cut(s) 312
BseLI CCNNNNNNNGG 4 cut(s) 205, 289, 407, 713
BseMII CTCAG 3 cut(s) 42, 702, 852
BseNI ACTGG 2 cut(s) 57, 449
BsePI GCGCGC 1 cut(s) 1214
BseXI GCAGC 4 cut(s) 307, 556, 590, 1042
BsgI GTGCAG 1 cut(s) 555
Bsh1236I CGCG 2 cut(s) 1214, 1216
BshFI GGCC 3 cut(s) 56, 789, 1061
BshTI ACCGGT 1 cut(s) 245
BsiHKAI GWGCWC 1 cut(s) 71
BsiHKCI CYCGRG 1 cut(s) 711
BsiSI CCGG 3 cut(s) 246, 665, 1337
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 4 cut(s) 205, 289, 407, 713
BsmAI GTCTC 1 cut(s) 93
BsmFI GGGAC 1 cut(s) 256
BsmI GAATGC 1 cut(s) 1170
BsnI GGCC 3 cut(s) 56, 789, 1061
BsoBI CYCGRG 1 cut(s) 711
Bsp119I TTCGAA 2 cut(s) 374, 967
Bsp1286I GDGCHC 1 cut(s) 71
Bsp13I TCCGGA 2 cut(s) 664, 1336
Bsp143I GATC 5 cut(s) 313, 880, 901, 998, 1333
Bsp19I CCATGG 1 cut(s) 1089
BspACI CCGC 5 cut(s) 196, 401, 864, 1058, 1168
BspANI GGCC 3 cut(s) 56, 789, 1061
BspCNI CTCAG 3 cut(s) 43, 701, 851
BspEI TCCGGA 2 cut(s) 664, 1336
BspFNI CGCG 2 cut(s) 1214, 1216
BspLI GGNNCC 4 cut(s) 210, 244, 835, 1335
BspMI ACCTGC 1 cut(s) 800
BspPI GGATC 3 cut(s) 308, 1328, 1341
BspQI GCTCTTC 2 cut(s) 59, 1017
BspT104I TTCGAA 2 cut(s) 374, 967
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 2 cut(s) 57, 449
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 2 cut(s) 710, 1089
BssHII GCGCGC 1 cut(s) 1214
BssMI GATC 5 cut(s) 313, 880, 901, 998, 1333
BssNAI GTATAC 1 cut(s) 1355
BssSI CACGAG 1 cut(s) 573
BssT1I CCWWGG 1 cut(s) 1089
Bst1107I GTATAC 1 cut(s) 1355
Bst2BI CACGAG 1 cut(s) 573
Bst6I CTCTTC 5 cut(s) 59, 826, 1017, 1304, 1364
BstBI TTCGAA 2 cut(s) 374, 967
BstC8I GCNNGC 5 cut(s) 791, 1029, 1053, 1170, 1216
BstDEI CTNAG 3 cut(s) 51, 688, 838
BstDSI CCRYGG 1 cut(s) 1089
BstENI CCTNNNNNAGG 1 cut(s) 287
BstF5I GGATG 4 cut(s) 490, 641, 978, 1099
BstFNI CGCG 2 cut(s) 1214, 1216
BstHHI GCGC 2 cut(s) 1216, 1218
BstKTI GATC 5 cut(s) 316, 883, 904, 1001, 1336
BstMAI GTCTC 1 cut(s) 93
BstMBI GATC 5 cut(s) 313, 880, 901, 998, 1333
BstMWI GCNNNNNNNGC 4 cut(s) 335, 575, 578, 1295
BstNSI RCATGY 3 cut(s) 386, 448, 1289
BstPAI GACNNNNGTC 1 cut(s) 248
BstSFI CTRYAG 1 cut(s) 648
BstUI CGCG 2 cut(s) 1214, 1216
BstV1I GCAGC 4 cut(s) 307, 556, 590, 1042
BstX2I RGATCY 4 cut(s) 313, 880, 998, 1333
BstXI CCANNNNNNTGG 2 cut(s) 730, 797
BstYI RGATCY 4 cut(s) 313, 880, 998, 1333
BstZ17I GTATAC 1 cut(s) 1355
BsuI GTATCC 2 cut(s) 163, 1275
BsuRI GGCC 3 cut(s) 56, 789, 1061
BtgI CCRYGG 1 cut(s) 1089
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 4 cut(s) 490, 641, 978, 1099
BtsIMutI CAGTG 1 cut(s) 64
BveI ACCTGC 1 cut(s) 800
Cac8I GCNNGC 5 cut(s) 791, 1029, 1053, 1170, 1216
CfoI GCGC 2 cut(s) 1216, 1218
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 1 cut(s) 243
Csp6I GTAC 1 cut(s) 389
CspAI ACCGGT 1 cut(s) 245
CviAII CATG 4 cut(s) 383, 445, 1090, 1286
CviQI GTAC 1 cut(s) 389
DdeI CTNAG 3 cut(s) 51, 688, 838
DpnI GATC 5 cut(s) 315, 882, 903, 1000, 1335
DpnII GATC 5 cut(s) 313, 880, 901, 998, 1333
DraIII CACNNNGTG 1 cut(s) 108
Eam1104I CTCTTC 5 cut(s) 59, 826, 1017, 1304, 1364
EarI CTCTTC 5 cut(s) 59, 826, 1017, 1304, 1364
Eco130I CCWWGG 1 cut(s) 1089
Eco32I GATATC 1 cut(s) 1263
Eco47I GGWCC 1 cut(s) 243
Eco88I CYCGRG 1 cut(s) 711
EcoNI CCTNNNNNAGG 1 cut(s) 287
EcoRI GAATTC 2 cut(s) 773, 944
EcoRV GATATC 1 cut(s) 1263
EcoT14I CCWWGG 1 cut(s) 1089
ErhI CCWWGG 1 cut(s) 1089
FaeI CATG 4 cut(s) 386, 448, 1093, 1289
FaqI GGGAC 1 cut(s) 256
FatI CATG 4 cut(s) 382, 444, 1089, 1285
FauI CCCGC 1 cut(s) 1161
FblI GTMKAC 1 cut(s) 1354
Fnu4HI GCNGC 5 cut(s) 296, 570, 579, 1056, 1059
FokI GGATG 4 cut(s) 497, 628, 985, 1106
Fsp4HI GCNGC 5 cut(s) 296, 570, 579, 1056, 1059
FspBI CTAG 4 cut(s) 188, 467, 1125, 1197
GlaI GCGC 2 cut(s) 1215, 1217
GluI GCNGC 5 cut(s) 296, 570, 579, 1056, 1059
HaeIII GGCC 3 cut(s) 56, 789, 1061
HapII CCGG 3 cut(s) 246, 665, 1337
HhaI GCGC 2 cut(s) 1216, 1218
Hin1II CATG 4 cut(s) 386, 448, 1093, 1289
Hin6I GCGC 2 cut(s) 1214, 1216
HinP1I GCGC 2 cut(s) 1214, 1216
HinfI GANTC 3 cut(s) 563, 608, 1085
HpaII CCGG 3 cut(s) 246, 665, 1337
Hpy166II GTNNAC 3 cut(s) 280, 1046, 1355
Hpy188I TCNGA 5 cut(s) 138, 691, 906, 1273, 1318
Hpy188III TCNNGA 5 cut(s) 357, 665, 1159, 1253, 1337
Hpy8I GTNNAC 3 cut(s) 280, 1046, 1355
Hpy99I CGWCG 1 cut(s) 479
HpyAV CCTTC 2 cut(s) 89, 963
HpyCH4IV ACGT 2 cut(s) 477, 918
HpyCH4V TGCA 3 cut(s) 122, 572, 809
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 575, 578, 1295
HpyF3I CTNAG 3 cut(s) 51, 688, 838
HpySE526I ACGT 2 cut(s) 477, 918
Hsp92II CATG 4 cut(s) 386, 448, 1093, 1289
HspAI GCGC 2 cut(s) 1214, 1216
Kpn2I TCCGGA 2 cut(s) 664, 1336
Kzo9I GATC 5 cut(s) 313, 880, 901, 998, 1333
LguI GCTCTTC 2 cut(s) 59, 1017
LmnI GCTCC 1 cut(s) 833
Lsp1109I GCAGC 4 cut(s) 307, 556, 590, 1042
LweI GCATC 2 cut(s) 307, 1246
MaeI CTAG 4 cut(s) 188, 467, 1125, 1197
MaeII ACGT 2 cut(s) 477, 918
MaeIII GTNAC 2 cut(s) 365, 919
MalI GATC 5 cut(s) 315, 882, 903, 1000, 1335
MboI GATC 5 cut(s) 313, 880, 901, 998, 1333
MflI RGATCY 4 cut(s) 313, 880, 998, 1333
MhlI GDGCHC 1 cut(s) 71
MmeI TCCRAC 1 cut(s) 711
MroI TCCGGA 2 cut(s) 664, 1336
MseI TTAA 3 cut(s) 204, 1113, 1137
MslI CAYNNNNRTG 1 cut(s) 1290
MspA1I CMGCKG 2 cut(s) 569, 866
MspI CCGG 3 cut(s) 246, 665, 1337
Mva1269I GAATGC 1 cut(s) 1170
MvnI CGCG 2 cut(s) 1214, 1216
MwoI GCNNNNNNNGC 4 cut(s) 335, 575, 578, 1295
NcoI CCATGG 1 cut(s) 1089
NdeII GATC 5 cut(s) 313, 880, 901, 998, 1333
NlaIII CATG 4 cut(s) 386, 448, 1093, 1289
NlaIV GGNNCC 4 cut(s) 210, 244, 835, 1335
NmuCI GTSAC 2 cut(s) 365, 919
NspI RCATGY 3 cut(s) 386, 448, 1289
NspV TTCGAA 2 cut(s) 374, 967
PauI GCGCGC 1 cut(s) 1214
PciSI GCTCTTC 2 cut(s) 59, 1017
PctI GAATGC 1 cut(s) 1170
PfeI GAWTC 3 cut(s) 563, 608, 1085
PinAI ACCGGT 1 cut(s) 245
PkrI GCNGC 5 cut(s) 297, 571, 580, 1057, 1060
PshAI GACNNNNGTC 1 cut(s) 248
PsiI TTATAA 1 cut(s) 170
PspN4I GGNNCC 4 cut(s) 210, 244, 835, 1335
PspPI GGNCC 1 cut(s) 243
PsuI RGATCY 4 cut(s) 313, 880, 998, 1333
PteI GCGCGC 1 cut(s) 1214
PvuII CAGCTG 1 cut(s) 569
RsaI GTAC 1 cut(s) 390
RsaNI GTAC 1 cut(s) 389
RseI CAYNNNNRTG 1 cut(s) 1290
SapI GCTCTTC 2 cut(s) 59, 1017
SaqAI TTAA 3 cut(s) 204, 1113, 1137
SatI GCNGC 5 cut(s) 296, 570, 579, 1056, 1059
Sau3AI GATC 5 cut(s) 313, 880, 901, 998, 1333
Sau96I GGNCC 1 cut(s) 243
SduI GDGCHC 1 cut(s) 71
SfaNI GCATC 2 cut(s) 307, 1246
SfcI CTRYAG 1 cut(s) 648
SfuI TTCGAA 2 cut(s) 374, 967
SinI GGWCC 1 cut(s) 243
SmiMI CAYNNNNRTG 1 cut(s) 1290
SmlI CTYRAG 2 cut(s) 613, 1067
SmoI CTYRAG 2 cut(s) 613, 1067
SpeI ACTAGT 2 cut(s) 1124, 1196
SsiI CCGC 5 cut(s) 196, 401, 864, 1058, 1168
SspMI CTAG 4 cut(s) 188, 467, 1125, 1197
StyI CCWWGG 1 cut(s) 1089
TaiI ACGT 2 cut(s) 480, 921
TaqI TCGA 4 cut(s) 374, 474, 524, 967
TatI WGTACW 1 cut(s) 388
TauI GCSGC 1 cut(s) 1061
TfiI GAWTC 3 cut(s) 563, 608, 1085
Tru1I TTAA 3 cut(s) 204, 1113, 1137
Tru9I TTAA 3 cut(s) 204, 1113, 1137
TscAI CASTG 1 cut(s) 64
TseFI GTSAC 2 cut(s) 365, 919
TseI GCWGC 4 cut(s) 295, 569, 578, 1055
Tsp45I GTSAC 2 cut(s) 365, 919
TspGWI ACGGA 1 cut(s) 306
TspRI CASTG 1 cut(s) 64
VpaK11BI GGWCC 1 cut(s) 243
XagI CCTNNNNNAGG 1 cut(s) 287
XapI RAATTY 7 cut(s) 254, 631, 637, 702, 773, 944, 1154
XceI RCATGY 3 cut(s) 386, 448, 1289
XmiI GTMKAC 1 cut(s) 1354
XspI CTAG 4 cut(s) 188, 467, 1125, 1197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.