Rmu_sc0001824.1_g000038

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001824.1
OG0000089
Physical Location & Seq
Forward (+)
150439 .. 153424
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001824.1_g000038.1.cds

Sequence Viewer

Length: 1332 bp
atgaaagaagtgatgcagcaagctaaatcggtaggcttaccacgtgctgctgccctcctcaaacctgataatatagattcaatggaagtgtggctggattttataaaatctagaacgacagaaacatttaggaagcaacaaagtgagacaccggttgcaatatcaaggtccgatatttggcttcgtgcctatgaagtgaagaaaaaagcaggtgaagaagttgaggatccggaactagtgaaactagttcgaaagtacaaggaagaagaagaagtaacacaaccatgttcaataaaagctgatgttgttgcaaaggcacttggtcctaacctgcgaggacgagttagagggcttgggtttggtgcactcccttcaaaagtggatggtcagacacacgttgctaataagatcactatgctagagaacgctcttgctgttcaaacacaacaggtggaccgattgacagagttagtgcaaggtctcgttgctcggctagacaaaggagagaacgtcaatagaaaacgaaaacagaatttgaattgttatagtgatatagcacaaagcaagcagaaagatgcaagtgttataagttctaacagggagaggggcagtagggagcaaattaaagaaaatacctacggaaatgagccacatttgggaaacggtagacaaaaaaagagccaaaagatagatgcagtggaaaaagtgtacttgctaagttggtttgctaaagaagaagaagtcgttgctactggtggcattttgtcaaaagatctagaagctttggtgcatcatgtgcctctaggccatgattgttggaaaatttcagtgcacgaagtttttcatgatatagctttgtatcgatcgataagtgagttcaattggcttgaggcatctagaggaagtgtaatcgcatggcctgtcaaatatatcaaggttgcttctgtagaaaatgatctaggtggtagaagtgatgttgaaacatcaggacctgtacatcctcaaaccttgtgtgatgccccggaaatttgtaattattttccgaggaaattctggaatctaattatggttacgagacgaaaaatcagatttccctttttggaaaccttttctctctcttctctcccgagcccggttcgccccctcaccttcgccggcgtcattcttcatcctccggccaccttttgcttctattccaaagggaatcctgctctcctcagtcccctctacacgtccgtggtggtgattagtagtgggaagcactgtagacggcgctacaaggccaagaagtttggcggcggcgatgctttgaacccagatcggaacttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

443

Amino Acids

49.78

Weight (kDa)

9.32

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 104, 587
AarI CACCTGC 1 cut(s) 200
Acc36I ACCTGC 2 cut(s) 200, 339
AccI GTMKAC 2 cut(s) 667, 1267
AccIII TCCGGA 1 cut(s) 229
AciI CCGC 2 cut(s) 1296, 1299
AclWI GGATC 2 cut(s) 221, 234
AcoI YGGCCR 1 cut(s) 1176
AcsI RAATTY 4 cut(s) 532, 822, 1026, 1049
AcvI CACGTG 1 cut(s) 44
AcyI GRCGYC 1 cut(s) 1158
AfaI GTAC 3 cut(s) 257, 710, 996
AfiI CCNNNNNNNGG 3 cut(s) 177, 656, 1132
AflIII ACRYGT 2 cut(s) 394, 1230
AgeI ACCGGT 1 cut(s) 151
AgsI TTSAA 8 cut(s) 81, 291, 375, 440, 538, 880, 980, 1312
AhlI ACTAGT 2 cut(s) 235, 244
AjiI CACGTC 1 cut(s) 1233
AleI CACNNNNGTG 1 cut(s) 1235
AluBI AGCT 4 cut(s) 23, 299, 782, 854
AluI AGCT 4 cut(s) 23, 299, 782, 854
Alw21I GWGCWC 2 cut(s) 367, 834
Alw26I GTCTC 3 cut(s) 140, 485, 1069
Alw44I GTGCAC 2 cut(s) 363, 830
AlwI GGATC 2 cut(s) 221, 234
AlwNI CAGNNNCTG 1 cut(s) 992
Ama87I CYCGRG 1 cut(s) 1126
Aor13HI TCCGGA 1 cut(s) 229
AoxI GGCC 4 cut(s) 805, 917, 1176, 1281
ApaLI GTGCAC 2 cut(s) 363, 830
ApeKI GCWGC 3 cut(s) 16, 47, 50
ApoI RAATTY 4 cut(s) 532, 822, 1026, 1049
AsiGI ACCGGT 1 cut(s) 151
Asp700I GAANNNNTTC 1 cut(s) 840
AspLEI GCGC 1 cut(s) 1275
AspS9I GGNCC 4 cut(s) 168, 323, 454, 989
AsuC2I CCSGG 2 cut(s) 1022, 1133
AsuHPI GGTGA 3 cut(s) 224, 1138, 1255
AsuII TTCGAA 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 1126
AvaII GGWCC 4 cut(s) 168, 323, 454, 989
BaeGI GKGCMC 2 cut(s) 367, 834
BamHI GGATCC 1 cut(s) 226
BanII GRGCYC 1 cut(s) 1133
BbrPI CACGTG 1 cut(s) 44
Bbv12I GWGCWC 2 cut(s) 367, 834
BbvI GCAGC 3 cut(s) 28, 34, 37
BccI CCATC 1 cut(s) 377
BceAI ACGGC 1 cut(s) 1286
BcnI CCSGG 2 cut(s) 1022, 1133
BcoDI GTCTC 3 cut(s) 140, 485, 1069
BcuI ACTAGT 2 cut(s) 235, 244
BfaI CTAG 9 cut(s) 111, 236, 245, 419, 494, 776, 803, 897, 959
BfmI CTRYAG 2 cut(s) 945, 1264
BfoI RGCGCY 1 cut(s) 1276
BfuAI ACCTGC 2 cut(s) 200, 339
BglII AGATCT 1 cut(s) 772
BisI GCNGC 5 cut(s) 17, 48, 51, 1297, 1300
BlsI GCNGC 5 cut(s) 18, 49, 52, 1298, 1301
Bme1390I CCNGG 2 cut(s) 1022, 1133
Bme18I GGWCC 4 cut(s) 168, 323, 454, 989
BmeT110I CYCGRG 1 cut(s) 1126
BmgBI CACGTC 1 cut(s) 1233
BmgT120I GGNCC 4 cut(s) 168, 323, 454, 989
BmiI GGNNCC 1 cut(s) 228
BmrFI CCNGG 2 cut(s) 1022, 1133
BmsI GCATC 7 cut(s) 3, 565, 682, 799, 902, 1006, 1294
Bpu14I TTCGAA 1 cut(s) 250
BpuEI CTTGAG 1 cut(s) 908
BpuMI CCSGG 2 cut(s) 1022, 1133
Bsa29I ATCGAT 2 cut(s) 862, 866
BsaAI YACGTR 1 cut(s) 44
BsaHI GRCGYC 1 cut(s) 1158
BsaI GGTCTC 1 cut(s) 485
BsaJI CCNNGG 3 cut(s) 1020, 1043, 1236
BsaWI WCCGGW 2 cut(s) 151, 229
BsaXI ACNNNNNCTCC 2 cut(s) 495, 525
Bsc4I CCNNNNNNNGG 3 cut(s) 177, 656, 1132
Bse118I RCCGGY 2 cut(s) 151, 1154
Bse1I ACTGG 1 cut(s) 757
BseAI TCCGGA 1 cut(s) 229
BseCI ATCGAT 2 cut(s) 862, 866
BseDI CCNNGG 3 cut(s) 1020, 1043, 1236
BseGI GGATG 3 cut(s) 388, 997, 1168
BseLI CCNNNNNNNGG 3 cut(s) 177, 656, 1132
BseMII CTCAG 1 cut(s) 1231
BseNI ACTGG 1 cut(s) 757
BseRI GAGGAG 2 cut(s) 47, 1205
BseSI GKGCMC 2 cut(s) 367, 834
BseXI GCAGC 3 cut(s) 28, 34, 37
Bsh1285I CGRYCG 1 cut(s) 866
BshFI GGCC 4 cut(s) 807, 919, 1178, 1283
BshTI ACCGGT 1 cut(s) 151
BshVI ATCGAT 2 cut(s) 862, 866
BsiEI CGRYCG 1 cut(s) 866
BsiHKAI GWGCWC 2 cut(s) 367, 834
BsiHKCI CYCGRG 1 cut(s) 1126
BsiSI CCGG 6 cut(s) 152, 230, 1022, 1133, 1155, 1175
BslFI GGGAC 1 cut(s) 1206
BslI CCNNNNNNNGG 3 cut(s) 177, 656, 1132
BsmAI GTCTC 3 cut(s) 140, 485, 1069
BsmBI CGTCTC 1 cut(s) 1069
BsmFI GGGAC 1 cut(s) 1206
BsnI GGCC 4 cut(s) 807, 919, 1178, 1283
Bso31I GGTCTC 1 cut(s) 485
BsoBI CYCGRG 1 cut(s) 1126
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 3 cut(s) 367, 834, 1133
Bsp13I TCCGGA 1 cut(s) 229
Bsp1407I TGTACA 1 cut(s) 994
Bsp143I GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
BspACI CCGC 2 cut(s) 1296, 1299
BspANI GGCC 4 cut(s) 807, 919, 1178, 1283
BspCNI CTCAG 1 cut(s) 1230
BspDI ATCGAT 2 cut(s) 862, 866
BspEI TCCGGA 1 cut(s) 229
BspHI TCATGA 1 cut(s) 844
BspLI GGNNCC 1 cut(s) 228
BspMI ACCTGC 2 cut(s) 200, 339
BspPI GGATC 2 cut(s) 221, 234
BspT104I TTCGAA 1 cut(s) 250
BspTNI GGTCTC 1 cut(s) 485
BsrFI RCCGGY 2 cut(s) 151, 1154
BsrGI TGTACA 1 cut(s) 994
BsrI ACTGG 1 cut(s) 757
BssAI RCCGGY 2 cut(s) 151, 1154
BssECI CCNNGG 3 cut(s) 1020, 1043, 1236
BssMI GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
BssNI GRCGYC 1 cut(s) 1158
Bst4CI ACNGT 2 cut(s) 665, 1265
Bst6I CTCTTC 1 cut(s) 1123
BstACI GRCGYC 1 cut(s) 1158
BstAPI GCANNNNNTGC 1 cut(s) 796
BstAUI TGTACA 1 cut(s) 994
BstBAI YACGTR 1 cut(s) 44
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 3 cut(s) 21, 566, 1156
BstDEI CTNAG 2 cut(s) 716, 1217
BstDSI CCRYGG 1 cut(s) 1236
BstF5I GGATG 3 cut(s) 388, 997, 1168
BstH2I RGCGCY 1 cut(s) 1276
BstHHI GCGC 1 cut(s) 1275
BstKTI GATC 6 cut(s) 229, 411, 775, 866, 958, 1321
BstMAI GTCTC 3 cut(s) 140, 485, 1069
BstMBI GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
BstMCI CGRYCG 1 cut(s) 866
BstMWI GCNNNNNNNGC 2 cut(s) 796, 1137
BstSCI CCNGG 2 cut(s) 1020, 1131
BstSFI CTRYAG 2 cut(s) 945, 1264
BstSLI GKGCMC 2 cut(s) 367, 834
BstV1I GCAGC 3 cut(s) 28, 34, 37
BstX2I RGATCY 2 cut(s) 226, 772
BstYI RGATCY 2 cut(s) 226, 772
Bsu15I ATCGAT 2 cut(s) 862, 866
BsuRI GGCC 4 cut(s) 807, 919, 1178, 1283
BsuTUI ATCGAT 2 cut(s) 862, 866
BtgI CCRYGG 1 cut(s) 1236
BtgZI GCGATG 1 cut(s) 1317
BtrI CACGTC 1 cut(s) 1233
BtsCI GGATG 3 cut(s) 388, 997, 1168
BtsI GCAGTG 1 cut(s) 702
BtsIMutI CAGTG 3 cut(s) 702, 834, 1261
BveI ACCTGC 2 cut(s) 200, 339
Cac8I GCNNGC 3 cut(s) 21, 566, 1156
CaiI CAGNNNCTG 1 cut(s) 992
CciI TCATGA 1 cut(s) 844
CfoI GCGC 1 cut(s) 1275
Cfr10I RCCGGY 2 cut(s) 151, 1154
Cfr13I GGNCC 4 cut(s) 168, 323, 454, 989
ClaI ATCGAT 2 cut(s) 862, 866
CseI GACGC 1 cut(s) 1147
Csp6I GTAC 3 cut(s) 256, 709, 995
CspAI ACCGGT 1 cut(s) 151
CviAII CATG 5 cut(s) 285, 794, 809, 845, 915
CviQI GTAC 3 cut(s) 256, 709, 995
DdeI CTNAG 2 cut(s) 716, 1217
DpnI GATC 6 cut(s) 228, 410, 774, 865, 957, 1320
DpnII GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
EaeI YGGCCR 1 cut(s) 1176
Eam1104I CTCTTC 1 cut(s) 1123
EarI CTCTTC 1 cut(s) 1123
Eco24I GRGCYC 1 cut(s) 1133
Eco31I GGTCTC 1 cut(s) 485
Eco47I GGWCC 4 cut(s) 168, 323, 454, 989
Eco72I CACGTG 1 cut(s) 44
Eco88I CYCGRG 1 cut(s) 1126
EcoO109I RGGNCCY 1 cut(s) 989
EcoT38I GRGCYC 1 cut(s) 1133
Esp3I CGTCTC 1 cut(s) 1069
FaeI CATG 5 cut(s) 288, 797, 812, 848, 918
FaqI GGGAC 1 cut(s) 1206
FatI CATG 5 cut(s) 284, 793, 808, 844, 914
FblI GTMKAC 2 cut(s) 667, 1267
Fnu4HI GCNGC 5 cut(s) 17, 48, 51, 1297, 1300
FokI GGATG 3 cut(s) 395, 984, 1155
FriOI GRGCYC 1 cut(s) 1133
Fsp4HI GCNGC 5 cut(s) 17, 48, 51, 1297, 1300
FspBI CTAG 9 cut(s) 111, 236, 245, 419, 494, 776, 803, 897, 959
GlaI GCGC 1 cut(s) 1274
GluI GCNGC 5 cut(s) 17, 48, 51, 1297, 1300
HaeII RGCGCY 1 cut(s) 1276
HaeIII GGCC 4 cut(s) 807, 919, 1178, 1283
HapII CCGG 6 cut(s) 152, 230, 1022, 1133, 1155, 1175
HgaI GACGC 1 cut(s) 1147
HhaI GCGC 1 cut(s) 1275
Hin1I GRCGYC 1 cut(s) 1158
Hin1II CATG 5 cut(s) 288, 797, 812, 848, 918
Hin6I GCGC 1 cut(s) 1273
HinP1I GCGC 1 cut(s) 1273
HindIII AAGCTT 1 cut(s) 780
HinfI GANTC 3 cut(s) 77, 1057, 1204
HpaII CCGG 6 cut(s) 152, 230, 1022, 1133, 1155, 1175
HphI GGTGA 3 cut(s) 224, 1138, 1255
Hpy166II GTNNAC 6 cut(s) 365, 454, 668, 709, 832, 1268
Hpy188I TCNGA 5 cut(s) 172, 390, 1044, 1088, 1323
Hpy188III TCNNGA 8 cut(s) 111, 230, 776, 845, 897, 987, 1054, 1126
Hpy8I GTNNAC 6 cut(s) 365, 454, 668, 709, 832, 1268
HpyAV CCTTC 2 cut(s) 381, 1159
HpyCH4III ACNGT 2 cut(s) 665, 1265
HpyCH4IV ACGT 4 cut(s) 43, 396, 510, 1232
HpyCH4V TGCA 9 cut(s) 16, 158, 311, 365, 475, 578, 695, 790, 832
HpyF10VI GCNNNNNNNGC 2 cut(s) 796, 1137
HpyF3I CTNAG 2 cut(s) 716, 1217
HpySE526I ACGT 4 cut(s) 43, 396, 510, 1232
Hsp92I GRCGYC 1 cut(s) 1158
Hsp92II CATG 5 cut(s) 288, 797, 812, 848, 918
HspAI GCGC 1 cut(s) 1273
Kpn2I TCCGGA 1 cut(s) 229
KroI GCCGGC 1 cut(s) 1154
KroNI GCCGGC 1 cut(s) 1156
Kzo9I GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
LmnI GCTCC 1 cut(s) 616
Lsp1109I GCAGC 3 cut(s) 28, 34, 37
LweI GCATC 7 cut(s) 3, 565, 682, 799, 902, 1006, 1294
MaeI CTAG 9 cut(s) 111, 236, 245, 419, 494, 776, 803, 897, 959
MaeII ACGT 4 cut(s) 43, 396, 510, 1232
MaeIII GTNAC 2 cut(s) 274, 1069
MalI GATC 6 cut(s) 228, 410, 774, 865, 957, 1320
MboI GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
MboII GAAGA 9 cut(s) 211, 227, 275, 278, 281, 746, 749, 1110, 1157
MfeI CAATTG 1 cut(s) 880
MflI RGATCY 2 cut(s) 226, 772
MhlI GDGCHC 3 cut(s) 367, 834, 1133
MluCI AATT 9 cut(s) 532, 538, 621, 822, 880, 1026, 1033, 1049, 1062
MmeI TCCRAC 1 cut(s) 797
MreI CGCCGGCG 1 cut(s) 1154
MroI TCCGGA 1 cut(s) 229
MroNI GCCGGC 1 cut(s) 1154
MroXI GAANNNNTTC 1 cut(s) 840
MseI TTAA 1 cut(s) 624
MslI CAYNNNNRTG 2 cut(s) 283, 1235
MspI CCGG 6 cut(s) 152, 230, 1022, 1133, 1155, 1175
MspR9I CCNGG 2 cut(s) 1022, 1133
MunI CAATTG 1 cut(s) 880
MwoI GCNNNNNNNGC 2 cut(s) 796, 1137
NaeI GCCGGC 1 cut(s) 1156
NciI CCSGG 2 cut(s) 1022, 1133
NdeII GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
NgoMIV GCCGGC 1 cut(s) 1154
NlaIII CATG 5 cut(s) 288, 797, 812, 848, 918
NlaIV GGNNCC 1 cut(s) 228
NmeAIII GCCGAG 1 cut(s) 469
NspV TTCGAA 1 cut(s) 250
OliI CACNNNNGTG 1 cut(s) 1235
PagI TCATGA 1 cut(s) 844
PaqCI CACCTGC 1 cut(s) 200
PdiI GCCGGC 1 cut(s) 1156
PdmI GAANNNNTTC 1 cut(s) 840
PfeI GAWTC 3 cut(s) 77, 1057, 1204
PinAI ACCGGT 1 cut(s) 151
PkrI GCNGC 5 cut(s) 18, 49, 52, 1298, 1301
Ple19I CGATCG 1 cut(s) 866
PmaCI CACGTG 1 cut(s) 44
PmlI CACGTG 1 cut(s) 44
Ppu21I YACGTR 1 cut(s) 44
PpuMI RGGWCCY 1 cut(s) 989
PsiI TTATAA 2 cut(s) 104, 587
Psp5II RGGWCCY 1 cut(s) 989
PspCI CACGTG 1 cut(s) 44
PspN4I GGNNCC 1 cut(s) 228
PspPI GGNCC 4 cut(s) 168, 323, 454, 989
PspPPI RGGWCCY 1 cut(s) 989
PstNI CAGNNNCTG 1 cut(s) 992
PsuI RGATCY 2 cut(s) 226, 772
PvuI CGATCG 1 cut(s) 866
RsaI GTAC 3 cut(s) 257, 710, 996
RsaNI GTAC 3 cut(s) 256, 709, 995
RseI CAYNNNNRTG 2 cut(s) 283, 1235
SaqAI TTAA 1 cut(s) 624
SatI GCNGC 5 cut(s) 17, 48, 51, 1297, 1300
Sau3AI GATC 6 cut(s) 226, 408, 772, 863, 955, 1318
Sau96I GGNCC 4 cut(s) 168, 323, 454, 989
ScrFI CCNGG 2 cut(s) 1022, 1133
SduI GDGCHC 3 cut(s) 367, 834, 1133
SfaNI GCATC 7 cut(s) 3, 565, 682, 799, 902, 1006, 1294
SfcI CTRYAG 2 cut(s) 945, 1264
SfuI TTCGAA 1 cut(s) 250
SgrAI CRCCGGYG 1 cut(s) 1154
SinI GGWCC 4 cut(s) 168, 323, 454, 989
SmiMI CAYNNNNRTG 2 cut(s) 283, 1235
SmlI CTYRAG 1 cut(s) 887
SmoI CTYRAG 1 cut(s) 887
SpeI ACTAGT 2 cut(s) 235, 244
Sse9I AATT 9 cut(s) 532, 538, 621, 822, 880, 1026, 1033, 1049, 1062
SsiI CCGC 2 cut(s) 1296, 1299
SspMI CTAG 9 cut(s) 111, 236, 245, 419, 494, 776, 803, 897, 959
StyD4I CCNGG 2 cut(s) 1020, 1131
TaaI ACNGT 2 cut(s) 665, 1265
TaiI ACGT 4 cut(s) 46, 399, 513, 1235
TaqI TCGA 3 cut(s) 250, 862, 866
TaqII GACCGA 1 cut(s) 471
TasI AATT 9 cut(s) 532, 538, 621, 822, 880, 1026, 1033, 1049, 1062
TatI WGTACW 3 cut(s) 255, 708, 994
TauI GCSGC 2 cut(s) 1299, 1302
TfiI GAWTC 3 cut(s) 77, 1057, 1204
Tru1I TTAA 1 cut(s) 624
Tru9I TTAA 1 cut(s) 624
TscAI CASTG 3 cut(s) 702, 834, 1268
TseI GCWGC 3 cut(s) 16, 47, 50
TspDTI ATGAA 4 cut(s) 17, 207, 833, 1157
TspGWI ACGGA 2 cut(s) 654, 1225
TspRI CASTG 3 cut(s) 702, 834, 1268
VneI GTGCAC 2 cut(s) 363, 830
VpaK11BI GGWCC 4 cut(s) 168, 323, 454, 989
XapI RAATTY 4 cut(s) 532, 822, 1026, 1049
XbaI TCTAGA 3 cut(s) 110, 775, 896
XmiI GTMKAC 2 cut(s) 667, 1267
XmnI GAANNNNTTC 1 cut(s) 840
XspI CTAG 9 cut(s) 111, 236, 245, 419, 494, 776, 803, 897, 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.