Rh2CG355400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000089
Physical Location & Seq
Reverse (-)
48126160 .. 48130607
4448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG355400.1

Sequence Viewer

Length: 1548 bp
ATGCTTCCCGATGCGAGATTAGGGTCTTGTAGTTTGGATTGCATTGGATCTGCATATCTAATCTCAGAGGGAAGTTCAAATTCTCCTGAAGCACCTGCTAGTATAGGAACTCAAGATGCAACAAATTCAGAAATTTCAAACAGAAAACCTAGAGGTAAGGCAAAGGCATTGGACAAAGGAAAAGTAATAGAACCTGTTGAAGTCGAATTCAATGAAAGAAGTCAGCCTTACGGGAAACATGCAGCTAGATTTGCTACTTTCCTTGGTGTCACAGCAAGAGAACTAGTGCCATTAACAATTCCCTCCTGGACTGGGAAGGCACTCTCAGATGAATTCAAAACTGAAATCTGGAAACACATCACTACTTATTACATTGTGGACGAGTGTCACAAGAAAGTAATTTTTCAAAGAATGTCTAAGCTTTGGCGAGATCATAGAAGCTTGACATTAAAAGAAGTAATGAAGCAAGCTGAATTGGTAGGCCTACAAACAGCTGCTGCCATGTGCAAACCTGATAATATACATTCTATGGATGAGTGGTTAAGGTTTATCAAATCCAGGATGACTCCAGCGTTTATGGAAAAGTGTGAAAAGTTTAGACGGATGAGAGAACGAAAAACTTTACTTCATAGGACAAGTAGAAAAAGCTTTGCCTGCATTGAGGATGAATTGAAGCAAAAGTGTGACAAACCTGATTCAATAACAAGGTGTGATGTGTGGCTTCATGCTTATGAAGCAAAGAAGAAGGATTCAAGTGAAGATGTTGAAGATCCAGAAGTAGTGAAACAAGTCAAACAAAACATGGCAGAACAAGTGACTTCACAAACTCATTCTGTCAACGATGATGCTGTTTCCAAAGTTTTAGGACCTGATCGACGAGGGCGAGTACGTGGATATGGATTTGGAGCACTTCCTTCGAAGGTAGATGGTCAAACATTTGTGGGTAACAAAGTTACTATGTTGGAGAATGCACTATCTGCTACTTCACGAGAGCTGCAAGGGTTGAAGATGATGGTAAAATATCTTTTAGCTCGATCAGACGAAGGAGAGAAGAAGAATGAAACCAGCAGTAGTGCTCAGCATTCTGCCACTGAGAGTGCAGAAAGTAAAAAAATAAATGCAACTGTTAGAAGTTCTAATAATGATAGAGCAGAGAGCAAGAAAAGAAAACTTAAAGATGGTAGAGTTGGAGGTTCTGAACAAGAAACAAGCAAACAGAGTAAGCAAAAGACACATGCAAGTATTCTGTCAACAGCAAAAGAACAGGAAGGTGGAAGTCAAGTAATGTTTGTTCCTTCAATGAAAAAATTGAACTTGTTAAGTTGGTTGGATAAAGATGAAAAGATTGTTGCAACTGCTGACCTTCACTCAGAGGATCCAAACGAGAAAGTACATAGTGTTCCTCTTGGTCCTGGCTGTTGGAAAGTTTGGGTGCGCGAAGTCTCTCATGACATAGCTTTGTTTCGGCCAACCCAAGAGTTCTGTACGCTTGCTGCAGCTAAGGGAAGCACAGTGGCTTGGCCCATAAACTTCATCAAGTTACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

515

Amino Acids

57.71

Weight (kDa)

9.14

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 178 - 302 2.2e-17 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 438 - 514 1.3e-07 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 103
Acc36I ACCTGC 1 cut(s) 103
AccII CGCG 1 cut(s) 1437
AclWI GGATC 4 cut(s) 55, 764, 1370, 1383
AcoI YGGCCR 1 cut(s) 1466
AcsI RAATTY 5 cut(s) 79, 124, 132, 206, 332
AcuI CTGAAG 1 cut(s) 108
AfaI GTAC 3 cut(s) 888, 1392, 1486
AfiI CCNNNNNNNGG 1 cut(s) 312
AhlI ACTAGT 1 cut(s) 283
AjnI CCWGG 3 cut(s) 305, 557, 1411
Alw21I GWGCWC 2 cut(s) 910, 1078
Alw26I GTCTC 1 cut(s) 1447
AlwI GGATC 4 cut(s) 55, 764, 1370, 1383
AlwNI CAGNNNCTG 1 cut(s) 497
AoxI GGCC 3 cut(s) 481, 1466, 1520
ApeKI GCWGC 6 cut(s) 242, 494, 497, 994, 1493, 1496
ApoI RAATTY 5 cut(s) 79, 124, 132, 206, 332
AspLEI GCGC 1 cut(s) 1437
AspS9I GGNCC 3 cut(s) 866, 1409, 1521
AsuII TTCGAA 1 cut(s) 917
AvaII GGWCC 2 cut(s) 866, 1409
BamHI GGATCC 1 cut(s) 1375
BauI CACGAG 1 cut(s) 987
Bbv12I GWGCWC 2 cut(s) 910, 1078
BbvI GCAGC 6 cut(s) 254, 481, 484, 981, 1480, 1508
BccI CCATC 3 cut(s) 920, 1006, 1172
BcgI CGANNNNNNTGC 2 cut(s) 897, 931
BciT130I CCWGG 3 cut(s) 307, 559, 1413
BcoDI GTCTC 1 cut(s) 1447
BcuI ACTAGT 1 cut(s) 283
BfaI CTAG 4 cut(s) 99, 150, 246, 284
BfmI CTRYAG 1 cut(s) 1494
BfuAI ACCTGC 1 cut(s) 103
BisI GCNGC 6 cut(s) 243, 495, 498, 995, 1494, 1497
BlpI GCTNAGC 1 cut(s) 1077
BlsI GCNGC 6 cut(s) 244, 496, 499, 996, 1495, 1498
Bme1390I CCNGG 3 cut(s) 307, 559, 1413
Bme18I GGWCC 2 cut(s) 866, 1409
BmgT120I GGNCC 3 cut(s) 866, 1409, 1521
BmiI GGNNCC 1 cut(s) 1377
BmrFI CCNGG 3 cut(s) 307, 559, 1413
BmrI ACTGGG 1 cut(s) 321
BmsI GCATC 2 cut(s) 106, 835
BmuI ACTGGG 1 cut(s) 321
BoxI GACNNNNGTC 1 cut(s) 384
BpmI CTGGAG 1 cut(s) 552
Bpu10I CCTNAGC 1 cut(s) 1500
Bpu1102I GCTNAGC 1 cut(s) 1077
Bpu14I TTCGAA 1 cut(s) 917
BpuEI CTTGAG 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 890
BsaJI CCNNGG 1 cut(s) 262
Bsc4I CCNNNNNNNGG 1 cut(s) 312
Bse1I ACTGG 1 cut(s) 316
BseBI CCWGG 3 cut(s) 307, 559, 1413
BseDI CCNNGG 1 cut(s) 262
BseGI GGATG 4 cut(s) 538, 567, 609, 670
BseLI CCNNNNNNNGG 1 cut(s) 312
BseMII CTCAG 5 cut(s) 78, 339, 1083, 1091, 1383
BseNI ACTGG 1 cut(s) 316
BseXI GCAGC 6 cut(s) 254, 481, 484, 981, 1480, 1508
BsgI GTGCAG 1 cut(s) 1119
Bsh1236I CGCG 1 cut(s) 1437
BshFI GGCC 3 cut(s) 483, 1468, 1522
BsiHKAI GWGCWC 2 cut(s) 910, 1078
BslI CCNNNNNNNGG 1 cut(s) 312
BsmAI GTCTC 1 cut(s) 1447
BsmI GAATGC 2 cut(s) 973, 1081
BsnI GGCC 3 cut(s) 483, 1468, 1522
Bsp119I TTCGAA 1 cut(s) 917
Bsp1286I GDGCHC 2 cut(s) 910, 1078
Bsp143I GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
Bsp1720I GCTNAGC 1 cut(s) 1077
BspANI GGCC 3 cut(s) 483, 1468, 1522
BspCNI CTCAG 5 cut(s) 77, 338, 1084, 1090, 1382
BspFNI CGCG 1 cut(s) 1437
BspHI TCATGA 1 cut(s) 1447
BspLI GGNNCC 1 cut(s) 1377
BspMAI CTGCAG 1 cut(s) 1498
BspMI ACCTGC 1 cut(s) 103
BspPI GGATC 4 cut(s) 55, 764, 1370, 1383
BspT104I TTCGAA 1 cut(s) 917
BsrI ACTGG 1 cut(s) 316
BssECI CCNNGG 1 cut(s) 262
BssMI GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
BssSI CACGAG 1 cut(s) 987
BssT1I CCWWGG 1 cut(s) 262
Bst2BI CACGAG 1 cut(s) 987
Bst2UI CCWGG 3 cut(s) 307, 559, 1413
Bst4CI ACNGT 2 cut(s) 1126, 1513
BstAPI GCANNNNNTGC 1 cut(s) 977
BstBAI YACGTR 1 cut(s) 890
BstBI TTCGAA 1 cut(s) 917
BstC8I GCNNGC 3 cut(s) 468, 655, 1491
BstDEI CTNAG 7 cut(s) 64, 325, 417, 1077, 1092, 1369, 1500
BstF5I GGATG 4 cut(s) 538, 567, 609, 670
BstFNI CGCG 1 cut(s) 1437
BstHHI GCGC 1 cut(s) 1437
BstKTI GATC 6 cut(s) 50, 433, 772, 874, 1037, 1378
BstMAI GTCTC 1 cut(s) 1447
BstMBI GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
BstMWI GCNNNNNNNGC 4 cut(s) 251, 654, 734, 977
BstNI CCWGG 3 cut(s) 307, 559, 1413
BstNSI RCATGY 2 cut(s) 242, 1238
BstPAI GACNNNNGTC 1 cut(s) 384
BstSCI CCNGG 3 cut(s) 305, 557, 1411
BstSFI CTRYAG 1 cut(s) 1494
BstUI CGCG 1 cut(s) 1437
BstV1I GCAGC 6 cut(s) 254, 481, 484, 981, 1480, 1508
BstX2I RGATCY 3 cut(s) 47, 769, 1375
BstYI RGATCY 3 cut(s) 47, 769, 1375
BsuRI GGCC 3 cut(s) 483, 1468, 1522
BtsCI GGATG 4 cut(s) 538, 567, 609, 670
BtsIMutI CAGTG 2 cut(s) 1089, 1518
BveI ACCTGC 1 cut(s) 103
Cac8I GCNNGC 3 cut(s) 468, 655, 1491
CaiI CAGNNNCTG 1 cut(s) 497
CciI TCATGA 1 cut(s) 1447
CfoI GCGC 1 cut(s) 1437
Cfr13I GGNCC 3 cut(s) 866, 1409, 1521
Csp6I GTAC 3 cut(s) 887, 1391, 1485
CviAII CATG 6 cut(s) 239, 502, 725, 802, 1235, 1448
CviQI GTAC 3 cut(s) 887, 1391, 1485
DdeI CTNAG 7 cut(s) 64, 325, 417, 1077, 1092, 1369, 1500
DpnI GATC 6 cut(s) 49, 432, 771, 873, 1036, 1377
DpnII GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
EaeI YGGCCR 1 cut(s) 1466
Eco130I CCWWGG 1 cut(s) 262
Eco147I AGGCCT 1 cut(s) 483
Eco47I GGWCC 2 cut(s) 866, 1409
Eco57I CTGAAG 1 cut(s) 108
EcoO109I RGGNCCY 1 cut(s) 866
EcoRI GAATTC 2 cut(s) 206, 332
EcoRII CCWGG 3 cut(s) 305, 557, 1411
EcoT14I CCWWGG 1 cut(s) 262
ErhI CCWWGG 1 cut(s) 262
FaeI CATG 6 cut(s) 242, 505, 728, 805, 1238, 1451
FalI AAGNNNNNCTT 2 cut(s) 211, 243
FatI CATG 6 cut(s) 238, 501, 724, 801, 1234, 1447
Fnu4HI GCNGC 6 cut(s) 243, 495, 498, 995, 1494, 1497
FokI GGATG 4 cut(s) 545, 574, 616, 677
Fsp4HI GCNGC 6 cut(s) 243, 495, 498, 995, 1494, 1497
FspBI CTAG 4 cut(s) 99, 150, 246, 284
GlaI GCGC 1 cut(s) 1436
GluI GCNGC 6 cut(s) 243, 495, 498, 995, 1494, 1497
GsuI CTGGAG 1 cut(s) 552
HaeIII GGCC 3 cut(s) 483, 1468, 1522
HhaI GCGC 1 cut(s) 1437
Hin1II CATG 6 cut(s) 242, 505, 728, 805, 1238, 1451
Hin6I GCGC 1 cut(s) 1435
HinP1I GCGC 1 cut(s) 1435
HincII GTYRAC 2 cut(s) 838, 1251
HindII GTYRAC 2 cut(s) 838, 1251
HindIII AAGCTT 3 cut(s) 419, 439, 646
HinfI GANTC 3 cut(s) 565, 695, 749
Hpy166II GTNNAC 3 cut(s) 379, 838, 1251
Hpy188I TCNGA 6 cut(s) 67, 130, 328, 1039, 1198, 1372
Hpy188III TCNNGA 7 cut(s) 8, 86, 113, 349, 773, 987, 1448
Hpy8I GTNNAC 3 cut(s) 379, 838, 1251
Hpy99I CGWCG 1 cut(s) 879
HpyAV CCTTC 8 cut(s) 310, 739, 913, 924, 1037, 1262, 1305, 1373
HpyCH4III ACNGT 2 cut(s) 1126, 1513
HpyCH4IV ACGT 1 cut(s) 889
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 654, 734, 977
HpyF3I CTNAG 7 cut(s) 64, 325, 417, 1077, 1092, 1369, 1500
HpySE526I ACGT 1 cut(s) 889
Hsp92II CATG 6 cut(s) 242, 505, 728, 805, 1238, 1451
HspAI GCGC 1 cut(s) 1435
Kzo9I GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
LmnI GCTCC 1 cut(s) 905
Lsp1109I GCAGC 6 cut(s) 254, 481, 484, 981, 1480, 1508
LweI GCATC 2 cut(s) 106, 835
MaeI CTAG 4 cut(s) 99, 150, 246, 284
MaeII ACGT 1 cut(s) 889
MaeIII GTNAC 7 cut(s) 268, 386, 683, 814, 944, 952, 1539
MalI GATC 6 cut(s) 49, 432, 771, 873, 1036, 1377
MboI GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
MboII GAAGA 6 cut(s) 754, 770, 779, 1018, 1063, 1066
MflI RGATCY 3 cut(s) 47, 769, 1375
MhlI GDGCHC 2 cut(s) 910, 1078
MlyI GAGTC 1 cut(s) 559
MmeI TCCRAC 4 cut(s) 942, 1168, 1308, 1400
MnlI CCTC 8 cut(s) 61, 146, 313, 655, 872, 1184, 1366, 1413
MseI TTAA 6 cut(s) 293, 449, 542, 1173, 1319, 1546
MslI CAYNNNNRTG 1 cut(s) 729
MspA1I CMGCKG 1 cut(s) 494
MspR9I CCNGG 3 cut(s) 307, 559, 1413
Mva1269I GAATGC 2 cut(s) 973, 1081
MvaI CCWGG 3 cut(s) 307, 559, 1413
MvnI CGCG 1 cut(s) 1437
MwoI GCNNNNNNNGC 4 cut(s) 251, 654, 734, 977
NdeII GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
NlaIII CATG 6 cut(s) 242, 505, 728, 805, 1238, 1451
NlaIV GGNNCC 1 cut(s) 1377
NmuCI GTSAC 4 cut(s) 268, 386, 683, 814
NspI RCATGY 2 cut(s) 242, 1238
NspV TTCGAA 1 cut(s) 917
PagI TCATGA 1 cut(s) 1447
PaqCI CACCTGC 1 cut(s) 103
PceI AGGCCT 1 cut(s) 483
PcsI WCGNNNNNNNCGW 1 cut(s) 880
PctI GAATGC 2 cut(s) 973, 1081
PfeI GAWTC 2 cut(s) 695, 749
PfoI TCCNGGA 2 cut(s) 305, 557
PkrI GCNGC 6 cut(s) 244, 496, 499, 996, 1495, 1498
PleI GAGTC 1 cut(s) 559
PpsI GAGTC 1 cut(s) 559
Ppu21I YACGTR 1 cut(s) 890
PpuMI RGGWCCY 1 cut(s) 866
PshAI GACNNNNGTC 1 cut(s) 384
Psp5II RGGWCCY 1 cut(s) 866
Psp6I CCWGG 3 cut(s) 305, 557, 1411
PspGI CCWGG 3 cut(s) 305, 557, 1411
PspN4I GGNNCC 1 cut(s) 1377
PspPI GGNCC 3 cut(s) 866, 1409, 1521
PspPPI RGGWCCY 1 cut(s) 866
PsrI GAACNNNNNNTAC 4 cut(s) 1275, 1307, 1383, 1415
PstI CTGCAG 1 cut(s) 1498
PstNI CAGNNNCTG 1 cut(s) 497
PsuI RGATCY 3 cut(s) 47, 769, 1375
PvuII CAGCTG 1 cut(s) 494
RsaI GTAC 3 cut(s) 888, 1392, 1486
RsaNI GTAC 3 cut(s) 887, 1391, 1485
RseI CAYNNNNRTG 1 cut(s) 729
SaqAI TTAA 6 cut(s) 293, 449, 542, 1173, 1319, 1546
SatI GCNGC 6 cut(s) 243, 495, 498, 995, 1494, 1497
Sau3AI GATC 6 cut(s) 47, 430, 769, 871, 1034, 1375
Sau96I GGNCC 3 cut(s) 866, 1409, 1521
SchI GAGTC 1 cut(s) 559
ScrFI CCNGG 3 cut(s) 307, 559, 1413
SduI GDGCHC 2 cut(s) 910, 1078
SfaNI GCATC 2 cut(s) 106, 835
SfcI CTRYAG 1 cut(s) 1494
SfuI TTCGAA 1 cut(s) 917
SinI GGWCC 2 cut(s) 866, 1409
SmiMI CAYNNNNRTG 1 cut(s) 729
SmlI CTYRAG 1 cut(s) 111
SmoI CTYRAG 1 cut(s) 111
SpeI ACTAGT 1 cut(s) 283
SseBI AGGCCT 1 cut(s) 483
SspMI CTAG 4 cut(s) 99, 150, 246, 284
StuI AGGCCT 1 cut(s) 483
StyD4I CCNGG 3 cut(s) 305, 557, 1411
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 2 cut(s) 1126, 1513
TaiI ACGT 1 cut(s) 892
TaqI TCGA 4 cut(s) 204, 874, 917, 1033
TatI WGTACW 1 cut(s) 1390
TfiI GAWTC 2 cut(s) 695, 749
Tru1I TTAA 6 cut(s) 293, 449, 542, 1173, 1319, 1546
Tru9I TTAA 6 cut(s) 293, 449, 542, 1173, 1319, 1546
TscAI CASTG 2 cut(s) 1096, 1518
TseFI GTSAC 4 cut(s) 268, 386, 683, 814
TseI GCWGC 6 cut(s) 242, 494, 497, 994, 1493, 1496
Tsp45I GTSAC 4 cut(s) 268, 386, 683, 814
TspGWI ACGGA 1 cut(s) 616
TspRI CASTG 2 cut(s) 1096, 1518
VpaK11BI GGWCC 2 cut(s) 866, 1409
XapI RAATTY 5 cut(s) 79, 124, 132, 206, 332
XceI RCATGY 2 cut(s) 242, 1238
XspI CTAG 4 cut(s) 99, 150, 246, 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.