Rorug06G0009300

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000089
Physical Location & Seq
Reverse (-)
1387612 .. 1391195
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0009300.1

Sequence Viewer

Length: 1467 bp
ATGGCAATGTCTTCGTTGTTCCTCATCTCTGTGTTGATATCATTGGGCACTAGTATTGGTATAGTCCAAGCAGGCAACCCAAATTACAGAGATGCCCTTGCAAAGTCCATCCTCTTCTTCCAGGGACAGAGGTCAGGCAAGCTCCCCTCCGGCGCTGCCCAGCAAATTACCTGGAGGTCCAATTCTGGACTTTCCGATGGTCAACTCGCAAAAGTGGACTTAACTGGAGGATACTATGATGGTGGAGACAATGTCAAATTCAACTTCCCAATGGCTTTCACTGCGACAATGCTATCATGGGGATCACTTGAATATAGCAAAAAAATGGAGCCCCAACTAACGAATACCCGGGCCGCAATCCGATGGTCCGCAAACTACCTTCTAAAGTGTGCTCGAGCCACGCCCGACAGGCTCTACGTTGGGATCGGGGACCCTGATGTAGACCACAAGTGTTGGGAAAGGCCCGAAGACATGGACACGGTTCGAACCGTGTACTGGATCTCACCTAGCAATCCTGGTTCGGATGTTGCTGGAGAGACGGCGGCCGCATTGGCTGCTGCTTCTATGGTTTTCCGAAGGGTTGACCTCAAGTATTCAAAATTGTTATTAAGAACAGCCAAGAAAGTATTTCAGTTTGCAATTCAGTACAGAGGTGCCTACAGTGATTCACTTGGTTCTGCTGTTTGCCCATTTTATTGCTCATATTCAGGATACAAGGATGAGCTAGTTTGGGGTGCTGCATGGCTTCTTAGAGCAACAAATGATGACTTTTATTTCAATTTCTTGAAATCCTTGGGAGCTGGTGATTCACCAGATATCTTCAGCTGGGACAACAAATTTGCTGGTGCTTATGTTCTGCTATCAAGGAGGGCAGTGTTGAACAATGACAAGAATTTTGACTCATATAAACAACAAGCTGAGCAATTTATGTGCCGGATTTTGCCCAACTCACCCTCTTCAAGCACACAATATACAAAAGGGCTCATATTCAAGCTGCCTGAAAGTAACCTCCAATATGTCACCTCAATAACATTCTTGCTTACTACCTATTCCAAGTACATGTCTGCCACAAAGCACAGGTTTAACTGTGGCAATCTTGTTGTCACTTCAAGCACTTTAAGAAACATTGCCAAGAGACAGGTGGACTACATATTAGGGGTAAACCCACTGAACATATCCTACATGGTAGGTTATGGACCTCGCTATCCTAAGAGAATTCACCACAGAGGATCTTCATTGCCCTCATTGGCAAGTCATCCAAAAACCATAGGTTGTGAAGCTGGTTTCCAACCATTCTTCTATTCATCAAATCCAAATCCTAACCTCCTAGTTGGAGCTGTTGTTGGAGGTCCAAATCAGAATGATGGGTTTCCAGATGATCGCACCGATTATAGTCATTCAGAGCCTGCAACATACATAAATGGTGCTATAGTCGGACCATTAGCATACTTTGCAAATCTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

488

Amino Acids

53.95

Weight (kDa)

9.12

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 29 - 479 5.3e-152 Glycosyl hydrolase family 9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 653
AccI GTMKAC 1 cut(s) 441
AciI CCGC 4 cut(s) 354, 369, 542, 546
AclWI GGATC 4 cut(s) 310, 431, 506, 1237
AcoI YGGCCR 1 cut(s) 543
AcsI RAATTY 4 cut(s) 257, 836, 892, 1215
AcuI CTGAAG 1 cut(s) 805
AfaI GTAC 3 cut(s) 494, 647, 1058
AfiI CCNNNNNNNGG 1 cut(s) 495
AflIII ACRYGT 1 cut(s) 1059
AgsI TTSAA 9 cut(s) 262, 311, 597, 778, 787, 880, 960, 991, 1110
AhlI ACTAGT 1 cut(s) 50
AjnI CCWGG 3 cut(s) 120, 170, 514
AluBI AGCT 8 cut(s) 142, 724, 800, 825, 917, 994, 1280, 1337
AluI AGCT 8 cut(s) 142, 724, 800, 825, 917, 994, 1280, 1337
Alw21I GWGCWC 1 cut(s) 394
Alw26I GTCTC 3 cut(s) 240, 530, 1129
AlwI GGATC 4 cut(s) 310, 431, 506, 1237
AlwNI CAGNNNCTG 1 cut(s) 1406
Ama87I CYCGRG 2 cut(s) 348, 393
AoxI GGCC 3 cut(s) 351, 461, 543
ApeKI GCWGC 5 cut(s) 155, 554, 557, 737, 994
ApoI RAATTY 4 cut(s) 257, 836, 892, 1215
ArsI GACNNNNNNTTYG 4 cut(s) 821, 853, 878, 910
AspLEI GCGC 1 cut(s) 155
AspS9I GGNCC 8 cut(s) 177, 351, 366, 430, 462, 1196, 1349, 1436
AsuC2I CCSGG 2 cut(s) 349, 350
AsuHPI GGTGA 6 cut(s) 495, 801, 815, 942, 1012, 1211
AsuII TTCGAA 1 cut(s) 484
AvaI CYCGRG 2 cut(s) 348, 393
AvaII GGWCC 6 cut(s) 177, 366, 430, 1196, 1349, 1436
BaeGI GKGCMC 1 cut(s) 50
BanI GGYRCC 1 cut(s) 653
BanII GRGCYC 2 cut(s) 333, 984
BbsI GAAGAC 2 cut(s) 3, 474
Bbv12I GWGCWC 1 cut(s) 394
BbvI GCAGC 5 cut(s) 142, 541, 544, 724, 981
BccI CCATC 5 cut(s) 116, 191, 233, 357, 1358
BceAI ACGGC 1 cut(s) 555
BcgI CGANNNNNNTGC 1 cut(s) 28
BciT130I CCWGG 3 cut(s) 122, 172, 516
BciVI GTATCC 2 cut(s) 224, 704
BcnI CCSGG 2 cut(s) 349, 350
BcoDI GTCTC 3 cut(s) 240, 530, 1129
BcuI ACTAGT 1 cut(s) 50
BfaI CTAG 4 cut(s) 51, 507, 725, 1328
BfmI CTRYAG 2 cut(s) 658, 1428
BfoI RGCGCY 1 cut(s) 156
BfuI GTATCC 2 cut(s) 224, 704
BglI GCCNNNNNGGC 2 cut(s) 409, 551
BisI GCNGC 8 cut(s) 156, 354, 543, 546, 555, 558, 738, 995
BlpI GCTNAGC 1 cut(s) 918
BlsI GCNGC 8 cut(s) 157, 355, 544, 547, 556, 559, 739, 996
Bme1390I CCNGG 5 cut(s) 122, 172, 349, 350, 516
Bme18I GGWCC 6 cut(s) 177, 366, 430, 1196, 1349, 1436
BmeT110I CYCGRG 2 cut(s) 348, 393
BmgT120I GGNCC 8 cut(s) 177, 351, 366, 430, 462, 1196, 1349, 1436
BmiI GGNNCC 4 cut(s) 330, 431, 432, 655
BmrFI CCNGG 5 cut(s) 122, 172, 349, 350, 516
BmsI GCATC 1 cut(s) 82
BoxI GACNNNNGTC 1 cut(s) 130
BpiI GAAGAC 2 cut(s) 3, 474
BpmI CTGGAG 3 cut(s) 193, 246, 552
Bpu1102I GCTNAGC 1 cut(s) 918
Bpu14I TTCGAA 1 cut(s) 484
BpuEI CTTGAG 1 cut(s) 572
BpuMI CCSGG 2 cut(s) 349, 350
BsaJI CCNNGG 3 cut(s) 121, 348, 792
BsaXI ACNNNNNCTCC 4 cut(s) 237, 267, 1326, 1356
Bsc4I CCNNNNNNNGG 1 cut(s) 495
Bse1I ACTGG 2 cut(s) 229, 500
Bse3DI GCAATG 3 cut(s) 12, 1125, 1235
BseBI CCWGG 3 cut(s) 122, 172, 516
BseDI CCNNGG 3 cut(s) 121, 348, 792
BseGI GGATG 4 cut(s) 108, 529, 724, 1255
BseLI CCNNNNNNNGG 1 cut(s) 495
BseMI GCAATG 3 cut(s) 12, 1125, 1235
BseMII CTCAG 1 cut(s) 909
BseNI ACTGG 2 cut(s) 229, 500
BseSI GKGCMC 1 cut(s) 50
BseX3I CGGCCG 1 cut(s) 543
BseXI GCAGC 5 cut(s) 142, 541, 544, 724, 981
BseYI CCCAGC 2 cut(s) 159, 825
Bsh1285I CGRYCG 1 cut(s) 546
BshFI GGCC 3 cut(s) 353, 463, 545
BshNI GGYRCC 1 cut(s) 653
BsiEI CGRYCG 1 cut(s) 546
BsiHKAI GWGCWC 1 cut(s) 394
BsiHKCI CYCGRG 2 cut(s) 348, 393
BsiSI CCGG 3 cut(s) 150, 349, 934
BslFI GGGAC 3 cut(s) 138, 443, 842
BslI CCNNNNNNNGG 1 cut(s) 495
BsmAI GTCTC 3 cut(s) 240, 530, 1129
BsmBI CGTCTC 1 cut(s) 530
BsmFI GGGAC 3 cut(s) 138, 443, 842
BsnI GGCC 3 cut(s) 353, 463, 545
BsoBI CYCGRG 2 cut(s) 348, 393
Bsp119I TTCGAA 1 cut(s) 484
Bsp1286I GDGCHC 4 cut(s) 50, 333, 394, 984
Bsp143I GATC 5 cut(s) 302, 423, 498, 1229, 1378
Bsp1720I GCTNAGC 1 cut(s) 918
BspACI CCGC 4 cut(s) 354, 369, 542, 546
BspANI GGCC 3 cut(s) 353, 463, 545
BspCNI CTCAG 1 cut(s) 910
BspLI GGNNCC 4 cut(s) 330, 431, 432, 655
BspPI GGATC 4 cut(s) 310, 431, 506, 1237
BspT104I TTCGAA 1 cut(s) 484
BspT107I GGYRCC 1 cut(s) 653
BsrDI GCAATG 3 cut(s) 12, 1125, 1235
BsrI ACTGG 2 cut(s) 229, 500
BssECI CCNNGG 3 cut(s) 121, 348, 792
BssMI GATC 5 cut(s) 302, 423, 498, 1229, 1378
BssT1I CCWWGG 1 cut(s) 792
Bst2UI CCWGG 3 cut(s) 122, 172, 516
Bst4CI ACNGT 4 cut(s) 481, 490, 662, 1088
Bst6I CTCTTC 2 cut(s) 119, 961
BstAPI GCANNNNNTGC 2 cut(s) 554, 1451
BstBI TTCGAA 1 cut(s) 484
BstC8I GCNNGC 3 cut(s) 73, 140, 1407
BstDEI CTNAG 3 cut(s) 749, 918, 1209
BstF5I GGATG 4 cut(s) 108, 529, 724, 1255
BstH2I RGCGCY 1 cut(s) 156
BstHHI GCGC 1 cut(s) 155
BstKTI GATC 5 cut(s) 305, 426, 501, 1232, 1381
BstMAI GTCTC 3 cut(s) 240, 530, 1129
BstMBI GATC 5 cut(s) 302, 423, 498, 1229, 1378
BstMCI CGRYCG 1 cut(s) 546
BstMWI GCNNNNNNNGC 5 cut(s) 281, 409, 551, 554, 1451
BstNI CCWGG 3 cut(s) 122, 172, 516
BstNSI RCATGY 1 cut(s) 1063
BstPAI GACNNNNGTC 1 cut(s) 130
BstSCI CCNGG 5 cut(s) 120, 170, 347, 348, 514
BstSFI CTRYAG 2 cut(s) 658, 1428
BstSLI GKGCMC 1 cut(s) 50
BstV1I GCAGC 5 cut(s) 142, 541, 544, 724, 981
BstV2I GAAGAC 2 cut(s) 3, 474
BstX2I RGATCY 2 cut(s) 498, 1229
BstYI RGATCY 2 cut(s) 498, 1229
BstZI CGGCCG 1 cut(s) 543
BsuI GTATCC 2 cut(s) 224, 704
BsuRI GGCC 3 cut(s) 353, 463, 545
BtsCI GGATG 4 cut(s) 108, 529, 724, 1255
BtsI GCAGTG 2 cut(s) 279, 879
BtsIMutI CAGTG 4 cut(s) 279, 667, 879, 1166
Cac8I GCNNGC 3 cut(s) 73, 140, 1407
CaiI CAGNNNCTG 1 cut(s) 1406
CciNI GCGGCCGC 1 cut(s) 543
CfoI GCGC 1 cut(s) 155
Cfr13I GGNCC 8 cut(s) 177, 351, 366, 430, 462, 1196, 1349, 1436
Cfr9I CCCGGG 1 cut(s) 348
Csp6I GTAC 3 cut(s) 493, 646, 1057
CspCI CAANNNNNGTGG 2 cut(s) 434, 469
CviAII CATG 5 cut(s) 297, 472, 741, 1060, 1183
CviQI GTAC 3 cut(s) 493, 646, 1057
DdeI CTNAG 3 cut(s) 749, 918, 1209
DpnI GATC 5 cut(s) 304, 425, 500, 1231, 1380
DpnII GATC 5 cut(s) 302, 423, 498, 1229, 1378
EaeI YGGCCR 1 cut(s) 543
EagI CGGCCG 1 cut(s) 543
Eam1104I CTCTTC 2 cut(s) 119, 961
EarI CTCTTC 2 cut(s) 119, 961
EclXI CGGCCG 1 cut(s) 543
Eco130I CCWWGG 1 cut(s) 792
Eco24I GRGCYC 2 cut(s) 333, 984
Eco32I GATATC 2 cut(s) 39, 817
Eco47I GGWCC 6 cut(s) 177, 366, 430, 1196, 1349, 1436
Eco52I CGGCCG 1 cut(s) 543
Eco57I CTGAAG 1 cut(s) 805
Eco88I CYCGRG 2 cut(s) 348, 393
EcoO109I RGGNCCY 1 cut(s) 430
EcoRI GAATTC 1 cut(s) 1215
EcoRII CCWGG 3 cut(s) 120, 170, 514
EcoRV GATATC 2 cut(s) 39, 817
EcoT14I CCWWGG 1 cut(s) 792
EcoT38I GRGCYC 2 cut(s) 333, 984
ErhI CCWWGG 1 cut(s) 792
Esp3I CGTCTC 1 cut(s) 530
FaeI CATG 5 cut(s) 300, 475, 744, 1063, 1186
FaqI GGGAC 3 cut(s) 138, 443, 842
FatI CATG 5 cut(s) 296, 471, 740, 1059, 1182
FblI GTMKAC 1 cut(s) 441
Fnu4HI GCNGC 8 cut(s) 156, 354, 543, 546, 555, 558, 738, 995
FokI GGATG 4 cut(s) 95, 536, 731, 1242
FriOI GRGCYC 2 cut(s) 333, 984
Fsp4HI GCNGC 8 cut(s) 156, 354, 543, 546, 555, 558, 738, 995
FspBI CTAG 4 cut(s) 51, 507, 725, 1328
GlaI GCGC 1 cut(s) 154
GluI GCNGC 8 cut(s) 156, 354, 543, 546, 555, 558, 738, 995
GsaI CCCAGC 2 cut(s) 163, 829
GsuI CTGGAG 3 cut(s) 193, 246, 552
HaeII RGCGCY 1 cut(s) 156
HaeIII GGCC 3 cut(s) 353, 463, 545
HapII CCGG 3 cut(s) 150, 349, 934
HhaI GCGC 1 cut(s) 155
Hin1II CATG 5 cut(s) 300, 475, 744, 1063, 1186
Hin6I GCGC 1 cut(s) 153
HinP1I GCGC 1 cut(s) 153
HincII GTYRAC 2 cut(s) 203, 583
HindII GTYRAC 2 cut(s) 203, 583
HinfI GANTC 3 cut(s) 665, 806, 899
HpaII CCGG 3 cut(s) 150, 349, 934
HphI GGTGA 6 cut(s) 495, 801, 815, 942, 1012, 1211
Hpy166II GTNNAC 7 cut(s) 203, 217, 442, 493, 583, 1144, 1162
Hpy188I TCNGA 7 cut(s) 196, 362, 523, 575, 1359, 1402, 1436
Hpy188III TCNNGA 4 cut(s) 186, 708, 784, 1373
Hpy8I GTNNAC 7 cut(s) 203, 217, 442, 493, 583, 1144, 1162
HpyAV CCTTC 2 cut(s) 389, 570
HpyCH4III ACNGT 4 cut(s) 481, 490, 662, 1088
HpyCH4IV ACGT 1 cut(s) 417
HpyCH4V TGCA 5 cut(s) 101, 638, 740, 1409, 1454
HpyF10VI GCNNNNNNNGC 5 cut(s) 281, 409, 551, 554, 1451
HpyF3I CTNAG 3 cut(s) 749, 918, 1209
HpySE526I ACGT 1 cut(s) 417
Hsp92II CATG 5 cut(s) 300, 475, 744, 1063, 1186
HspAI GCGC 1 cut(s) 153
KflI GGGWCCC 1 cut(s) 430
Kzo9I GATC 5 cut(s) 302, 423, 498, 1229, 1378
LmnI GCTCC 4 cut(s) 147, 328, 797, 1334
Lsp1109I GCAGC 5 cut(s) 142, 541, 544, 724, 981
LweI GCATC 1 cut(s) 82
MaeI CTAG 4 cut(s) 51, 507, 725, 1328
MaeII ACGT 1 cut(s) 417
MaeIII GTNAC 3 cut(s) 1004, 1018, 1102
MalI GATC 5 cut(s) 304, 425, 500, 1231, 1380
MboI GATC 5 cut(s) 302, 423, 498, 1229, 1378
MboII GAAGA 8 cut(s) 3, 106, 109, 479, 811, 948, 1224, 1288
MfeI CAATTG 1 cut(s) 1462
MflI RGATCY 2 cut(s) 498, 1229
MhlI GDGCHC 4 cut(s) 50, 333, 394, 984
MlyI GAGTC 1 cut(s) 893
MmeI TCCRAC 4 cut(s) 1312, 1312, 1324, 1414
MseI TTAA 4 cut(s) 221, 608, 1083, 1118
MslI CAYNNNNRTG 1 cut(s) 29
MspA1I CMGCKG 1 cut(s) 825
MspI CCGG 3 cut(s) 150, 349, 934
MspR9I CCNGG 5 cut(s) 122, 172, 349, 350, 516
MunI CAATTG 1 cut(s) 1462
MvaI CCWGG 3 cut(s) 122, 172, 516
MwoI GCNNNNNNNGC 5 cut(s) 281, 409, 551, 554, 1451
NciI CCSGG 2 cut(s) 349, 350
NdeII GATC 5 cut(s) 302, 423, 498, 1229, 1378
NlaIII CATG 5 cut(s) 300, 475, 744, 1063, 1186
NlaIV GGNNCC 4 cut(s) 330, 431, 432, 655
NmuCI GTSAC 2 cut(s) 1018, 1102
NotI GCGGCCGC 1 cut(s) 543
NspI RCATGY 1 cut(s) 1063
NspV TTCGAA 1 cut(s) 484
PaeR7I CTCGAG 1 cut(s) 393
PciI ACATGT 1 cut(s) 1059
PfeI GAWTC 2 cut(s) 665, 806
PflFI GACNNNGTC 1 cut(s) 251
PkrI GCNGC 8 cut(s) 157, 355, 544, 547, 556, 559, 739, 996
PleI GAGTC 1 cut(s) 893
PpsI GAGTC 1 cut(s) 893
PpuMI RGGWCCY 1 cut(s) 430
PscI ACATGT 1 cut(s) 1059
PshAI GACNNNNGTC 1 cut(s) 130
Psp5II RGGWCCY 1 cut(s) 430
Psp6I CCWGG 3 cut(s) 120, 170, 514
PspFI CCCAGC 2 cut(s) 159, 825
PspGI CCWGG 3 cut(s) 120, 170, 514
PspN4I GGNNCC 4 cut(s) 330, 431, 432, 655
PspPI GGNCC 8 cut(s) 177, 351, 366, 430, 462, 1196, 1349, 1436
PspPPI RGGWCCY 1 cut(s) 430
PspXI VCTCGAGB 1 cut(s) 393
PsrI GAACNNNNNNTAC 2 cut(s) 1163, 1195
PstNI CAGNNNCTG 1 cut(s) 1406
PsuI RGATCY 2 cut(s) 498, 1229
PsyI GACNNNGTC 1 cut(s) 251
PvuII CAGCTG 1 cut(s) 825
RsaI GTAC 3 cut(s) 494, 647, 1058
RsaNI GTAC 3 cut(s) 493, 646, 1057
RseI CAYNNNNRTG 1 cut(s) 29
SaqAI TTAA 4 cut(s) 221, 608, 1083, 1118
SatI GCNGC 8 cut(s) 156, 354, 543, 546, 555, 558, 738, 995
Sau3AI GATC 5 cut(s) 302, 423, 498, 1229, 1378
Sau96I GGNCC 8 cut(s) 177, 351, 366, 430, 462, 1196, 1349, 1436
SchI GAGTC 1 cut(s) 893
ScrFI CCNGG 5 cut(s) 122, 172, 349, 350, 516
SduI GDGCHC 4 cut(s) 50, 333, 394, 984
SfaNI GCATC 1 cut(s) 82
SfcI CTRYAG 2 cut(s) 658, 1428
Sfr274I CTCGAG 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 484
SinI GGWCC 6 cut(s) 177, 366, 430, 1196, 1349, 1436
SlaI CTCGAG 1 cut(s) 393
SmaI CCCGGG 1 cut(s) 350
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 2 cut(s) 393, 587
SmoI CTYRAG 2 cut(s) 393, 587
SpeI ACTAGT 1 cut(s) 50
SsiI CCGC 4 cut(s) 354, 369, 542, 546
SspMI CTAG 4 cut(s) 51, 507, 725, 1328
StyD4I CCNGG 5 cut(s) 120, 170, 347, 348, 514
StyI CCWWGG 1 cut(s) 792
TaaI ACNGT 4 cut(s) 481, 490, 662, 1088
TaiI ACGT 1 cut(s) 420
TaqI TCGA 2 cut(s) 394, 484
TatI WGTACW 3 cut(s) 492, 645, 1056
TauI GCSGC 3 cut(s) 356, 545, 548
TfiI GAWTC 2 cut(s) 665, 806
Tru1I TTAA 4 cut(s) 221, 608, 1083, 1118
Tru9I TTAA 4 cut(s) 221, 608, 1083, 1118
TscAI CASTG 4 cut(s) 286, 667, 879, 1173
TseFI GTSAC 2 cut(s) 1018, 1102
TseI GCWGC 5 cut(s) 155, 554, 557, 737, 994
Tsp45I GTSAC 2 cut(s) 1018, 1102
TspDTI ATGAA 2 cut(s) 1224, 1293
TspMI CCCGGG 1 cut(s) 348
TspRI CASTG 4 cut(s) 286, 667, 879, 1173
Tth111I GACNNNGTC 1 cut(s) 251
VpaK11BI GGWCC 6 cut(s) 177, 366, 430, 1196, 1349, 1436
XapI RAATTY 4 cut(s) 257, 836, 892, 1215
XceI RCATGY 1 cut(s) 1063
XcmI CCANNNNNNNNNTGG 1 cut(s) 1138
XhoI CTCGAG 1 cut(s) 393
XmaI CCCGGG 1 cut(s) 348
XmiI GTMKAC 1 cut(s) 441
XspI CTAG 4 cut(s) 51, 507, 725, 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.