Rorug01G0104500

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000089
Physical Location & Seq
Reverse (-)
17468762 .. 17475753
6992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0104500.1

Sequence Viewer

Length: 1848 bp
ATGGAAGCAAAGATCGCAAAGGCATTGGATAGTGGTCGACGAGTTATGCTCGGTGTAAAGAGAAAGCGGGCAACTCGATATGCTGCATATTTTCCTGGAGCTAAGCGTCGAGGCTTACCAAAGAAGCCGATCTTGAGTAAGCTCCGAAAGCGAAGGAAATTGTATGGATGCGGAACCAAACTCATGAGTTTTCAATCTCATGTTAGACGATCTTTACTTTCATCCTATTCAAATTTTACAAGAACTGGTGTGCCAGAGCGTCTGATGTTTTACCAGAATGGTGAATGGAACAATTATCCTCAGGTTCTGGTTGACTTGGTTAGGAAAGATCTTCAGATAAAGAAAGCAGCTATCAAGATTGAGTCAAATGGTGATCATTTACTGCTAGATTTTTTGCATATGTTCCAGTTGAACTTGAGAACAGGTGTACAACACCCTATTGCTTGGATTGACGAAGCTGGTAGTTGCTTCTTTCCAGAAATTTACAGCGACGATGAAGATGAGCCAAATGGCAACTGGCGGCATGAAGATTGCAACGATCAGGATCCCTTAGTTGACGAGTGTTGTGGGTCTCGTGAGATTAAACTGCATCTGGAAATTGAAATAGATGGAATGGATCAACCTGAGTTGAAGGAATGTAGTGGGGAGTCAAATGGTTTAGTAAAGAAAATTCAGATTGATCAAATACCTGCCAGTACTGGTTATGTGATGGAAGTTGAGAACAGTTGCAATGGAGGAGGTGGTCCACAAGTTGATGAAGATGTTGAGGATAATCAGCAGATGAGAAAGAACTTAACTAGAGCAACTGAAACTCTAAATAGAAAGCTGGACTGTGATACTGTTCGTAATATATTTTTTAAAGGAATGAACACTTGTGATGCTGCTGAGCTTGTTGATATATACCGATGCTCAAGTAATCTGATGCAAGCTCGACTGGAACTTTTCGAGAAACAGGTTGAAATTACTAAAACATTTCGCGGAGATGCAAATGTACGATATGCTTGGCTTGCTTCTTCAAAAGGAGAACTTTCGACTATATTAATGTATGGGTTTGGTCATTGTGGACTAGCAGCAATTAAGTCCATTTATGGTACTGGTGTCCATCTCACAGCGGCTAGCTTCTCCAACACCTGTGCAAGTTATTGTGATGTTGATGAAAATGGAGTACGGCACATGTTATTCTGTCGTGTCATAATGGGAAATATGGAGTTACTTCACCCTGAAAGTAAACAGTTTCATCCCTGCAGTCAAGATTATGATAGTGGAGTGGATGATCTTCAGGATCCAAAAAATTACATTGTCTGGAATATGAACATCAATACACACATATATCCAGAATTTGTTGTTAGTTTCAAGCTCTCATCCAATACTGAAGGACATCCAATTGGAAGTGAGAAAAAGCATGGAGTTTCAGGGGTTACGACATACGTCCAGGGACCCAAGGGCTATTTGCAATTACAGTCACCTGCAATTGATAAAGGGAGTAAGATTCATTCAAATTCAGAATGTGGGAGAATGTATGAAAGCGATGGTCAACTGATCTCATTGTCTGGATGTTTCCAGGCTACTACTGGTTCTACCACTCAAAGGACCCCTAAATCACCTTGGATGCCTTTCCCTATGTTATTTGCTGCTATTGCAAGTAAAATTCCTCCCAAGGATATGGAACAAGTTAATGTTCATTATGACTTTTTCAGGGCAAAGAAGATAACCCGTGAGGAATTTGTAGAGAAGCTGAGGTTGACTGTTGGAGATAGTTTATTGAGGTCTACAATAACGGAACTTCAATGCAAGATACCCTTTAAATCTAAGAGTGAATTGGGAGTGCCAAGGACAGCCCGCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

615

Amino Acids

69.45

Weight (kDa)

8.0

Isoelectric Point (pI)

43.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WWE_5 PF23467 79 - 158 2.4e-34 WWE domain
RST PF12174 532 - 596 8.7e-27 RCD1-SRO-TAF4 (RST) plant domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1474
Acc36I ACCTGC 2 cut(s) 697, 1474
AccI GTMKAC 2 cut(s) 37, 1769
AccII CGCG 1 cut(s) 978
AciI CCGC 6 cut(s) 67, 171, 520, 978, 1112, 1840
AclWI GGATC 5 cut(s) 539, 552, 624, 1277, 1290
AcsI RAATTY 7 cut(s) 232, 480, 669, 1337, 1498, 1647, 1721
AcuI CTGAAG 3 cut(s) 317, 1262, 1392
AfaI GTAC 5 cut(s) 429, 697, 993, 1093, 1167
AfiI CCNNNNNNNGG 1 cut(s) 1587
AflIII ACRYGT 1 cut(s) 1173
AjnI CCWGG 3 cut(s) 94, 1431, 1560
Alw26I GTCTC 1 cut(s) 576
AlwI GGATC 5 cut(s) 539, 552, 624, 1277, 1290
AlwNI CAGNNNCTG 1 cut(s) 307
ApeKI GCWGC 5 cut(s) 83, 347, 881, 1070, 1631
ApoI RAATTY 7 cut(s) 232, 480, 669, 1337, 1498, 1647, 1721
AseI ATTAAT 1 cut(s) 1040
AspS9I GGNCC 3 cut(s) 743, 1436, 1590
AsuHPI GGTGA 5 cut(s) 293, 383, 1208, 1455, 1593
AsuNHI GCTAGC 1 cut(s) 1115
AvaII GGWCC 3 cut(s) 743, 1436, 1590
AxyI CCTNAGG 1 cut(s) 300
BaeI ACNNNNGTAYC 2 cut(s) 1083, 1116
BamHI GGATCC 2 cut(s) 544, 1282
BauI CACGAG 1 cut(s) 573
BbvCI CCTCAGC 1 cut(s) 1736
BbvI GCAGC 5 cut(s) 70, 359, 868, 1082, 1618
BccI CCATC 4 cut(s) 602, 703, 1110, 1523
BceAI ACGGC 1 cut(s) 1184
BciT130I CCWGG 3 cut(s) 96, 1433, 1562
BclI TGATCA 2 cut(s) 373, 679
BcoDI GTCTC 1 cut(s) 576
BfaI CTAG 4 cut(s) 386, 798, 1067, 1116
BfmI CTRYAG 1 cut(s) 1243
BfuAI ACCTGC 2 cut(s) 697, 1474
BglII AGATCT 1 cut(s) 328
BisI GCNGC 7 cut(s) 84, 348, 521, 882, 1071, 1113, 1632
BlpI GCTNAGC 2 cut(s) 102, 885
BlsI GCNGC 7 cut(s) 85, 349, 522, 883, 1072, 1114, 1633
BmcAI AGTACT 1 cut(s) 697
Bme1390I CCNGG 3 cut(s) 96, 1433, 1562
Bme18I GGWCC 3 cut(s) 743, 1436, 1590
BmgT120I GGNCC 3 cut(s) 743, 1436, 1590
BmiI GGNNCC 6 cut(s) 175, 546, 1284, 1437, 1438, 1592
BmrFI CCNGG 3 cut(s) 96, 1433, 1562
BmsI GCATC 7 cut(s) 158, 598, 868, 896, 912, 973, 1599
BmtI GCTAGC 1 cut(s) 1119
BoxI GACNNNNGTC 1 cut(s) 1427
BplI GAGNNNNNCTC 2 cut(s) 33, 65
BpmI CTGGAG 1 cut(s) 117
Bpu10I CCTNAGC 1 cut(s) 1736
Bpu1102I GCTNAGC 2 cut(s) 102, 885
BpuEI CTTGAG 3 cut(s) 154, 436, 895
BsaBI GATNNNNATC 1 cut(s) 543
BsaI GGTCTC 1 cut(s) 576
BsaJI CCNNGG 5 cut(s) 1432, 1440, 1604, 1656, 1829
Bsc4I CCNNNNNNNGG 1 cut(s) 1587
Bse1I ACTGG 8 cut(s) 250, 406, 521, 693, 703, 939, 1099, 1576
Bse21I CCTNAGG 1 cut(s) 300
Bse3DI GCAATG 1 cut(s) 736
Bse8I GATNNNNATC 1 cut(s) 543
BseBI CCWGG 3 cut(s) 96, 1433, 1562
BseDI CCNNGG 5 cut(s) 1432, 1440, 1604, 1656, 1829
BseGI GGATG 8 cut(s) 173, 221, 1237, 1276, 1361, 1378, 1559, 1614
BseJI GATNNNNATC 1 cut(s) 543
BseLI CCNNNNNNNGG 1 cut(s) 1587
BseMI GCAATG 1 cut(s) 736
BseMII CTCAG 4 cut(s) 314, 615, 876, 1727
BseNI ACTGG 8 cut(s) 250, 406, 521, 693, 703, 939, 1099, 1576
BseRI GAGGAG 1 cut(s) 750
BseXI GCAGC 5 cut(s) 70, 359, 868, 1082, 1618
Bsh1236I CGCG 1 cut(s) 978
BslFI GGGAC 1 cut(s) 1449
BslI CCNNNNNNNGG 1 cut(s) 1587
BsmAI GTCTC 1 cut(s) 576
BsmFI GGGAC 1 cut(s) 1449
Bso31I GGTCTC 1 cut(s) 576
Bsp1407I TGTACA 1 cut(s) 427
Bsp1720I GCTNAGC 2 cut(s) 102, 885
BspACI CCGC 6 cut(s) 67, 171, 520, 978, 1112, 1840
BspCNI CTCAG 4 cut(s) 313, 616, 877, 1728
BspFNI CGCG 1 cut(s) 978
BspHI TCATGA 1 cut(s) 183
BspLI GGNNCC 6 cut(s) 175, 546, 1284, 1437, 1438, 1592
BspMAI CTGCAG 1 cut(s) 1247
BspMI ACCTGC 2 cut(s) 697, 1474
BspOI GCTAGC 1 cut(s) 1119
BspPI GGATC 5 cut(s) 539, 552, 624, 1277, 1290
BspTNI GGTCTC 1 cut(s) 576
BsrDI GCAATG 1 cut(s) 736
BsrGI TGTACA 1 cut(s) 427
BsrI ACTGG 8 cut(s) 250, 406, 521, 693, 703, 939, 1099, 1576
BssECI CCNNGG 5 cut(s) 1432, 1440, 1604, 1656, 1829
BssSI CACGAG 1 cut(s) 573
BssT1I CCWWGG 4 cut(s) 1440, 1604, 1656, 1829
Bst2BI CACGAG 1 cut(s) 573
Bst2UI CCWGG 3 cut(s) 96, 1433, 1562
Bst4CI ACNGT 6 cut(s) 725, 833, 841, 1233, 1461, 1747
BstAUI TGTACA 1 cut(s) 427
BstC8I GCNNGC 5 cut(s) 69, 927, 1008, 1117, 1840
BstDEI CTNAG 7 cut(s) 102, 300, 550, 624, 885, 1736, 1809
BstF5I GGATG 8 cut(s) 173, 221, 1237, 1276, 1361, 1378, 1559, 1614
BstFNI CGCG 1 cut(s) 978
BstMAI GTCTC 1 cut(s) 576
BstMWI GCNNNNNNNGC 4 cut(s) 14, 148, 1007, 1637
BstNI CCWGG 3 cut(s) 96, 1433, 1562
BstNSI RCATGY 1 cut(s) 1177
BstPAI GACNNNNGTC 1 cut(s) 1427
BstSCI CCNGG 3 cut(s) 94, 1431, 1560
BstSFI CTRYAG 1 cut(s) 1243
BstUI CGCG 1 cut(s) 978
BstV1I GCAGC 5 cut(s) 70, 359, 868, 1082, 1618
BstX2I RGATCY 3 cut(s) 328, 544, 1282
BstXI CCANNNNNNTGG 1 cut(s) 1663
BstYI RGATCY 3 cut(s) 328, 544, 1282
Bsu36I CCTNAGG 1 cut(s) 300
BtgZI GCGATG 1 cut(s) 1542
BtsCI GGATG 8 cut(s) 173, 221, 1237, 1276, 1361, 1378, 1559, 1614
BtsIMutI CAGTG 1 cut(s) 1843
BveI ACCTGC 2 cut(s) 697, 1474
Cac8I GCNNGC 5 cut(s) 69, 927, 1008, 1117, 1840
CaiI CAGNNNCTG 1 cut(s) 307
CciI TCATGA 1 cut(s) 183
Cfr13I GGNCC 3 cut(s) 743, 1436, 1590
CseI GACGC 2 cut(s) 95, 248
Csp6I GTAC 5 cut(s) 428, 696, 992, 1092, 1166
CviAII CATG 5 cut(s) 184, 200, 524, 1174, 1403
CviQI GTAC 5 cut(s) 428, 696, 992, 1092, 1166
DdeI CTNAG 7 cut(s) 102, 300, 550, 624, 885, 1736, 1809
DraI TTTAAA 2 cut(s) 859, 1804
Eco130I CCWWGG 4 cut(s) 1440, 1604, 1656, 1829
Eco31I GGTCTC 1 cut(s) 576
Eco47I GGWCC 3 cut(s) 743, 1436, 1590
Eco57I CTGAAG 3 cut(s) 317, 1262, 1392
Eco81I CCTNAGG 1 cut(s) 300
EcoO109I RGGNCCY 2 cut(s) 1436, 1590
EcoRII CCWGG 3 cut(s) 94, 1431, 1560
EcoT14I CCWWGG 4 cut(s) 1440, 1604, 1656, 1829
ErhI CCWWGG 4 cut(s) 1440, 1604, 1656, 1829
FaeI CATG 5 cut(s) 187, 203, 527, 1177, 1406
FalI AAGNNNNNCTT 6 cut(s) 116, 148, 1011, 1043, 1784, 1816
FaqI GGGAC 1 cut(s) 1449
FatI CATG 5 cut(s) 183, 199, 523, 1173, 1402
FauI CCCGC 1 cut(s) 60
FauNDI CATATG 1 cut(s) 399
FbaI TGATCA 2 cut(s) 373, 679
FblI GTMKAC 2 cut(s) 37, 1769
Fnu4HI GCNGC 7 cut(s) 84, 348, 521, 882, 1071, 1113, 1632
FokI GGATG 8 cut(s) 180, 208, 1224, 1283, 1348, 1365, 1566, 1621
Fsp4HI GCNGC 7 cut(s) 84, 348, 521, 882, 1071, 1113, 1632
FspBI CTAG 4 cut(s) 386, 798, 1067, 1116
GluI GCNGC 7 cut(s) 84, 348, 521, 882, 1071, 1113, 1632
GsuI CTGGAG 1 cut(s) 117
HgaI GACGC 2 cut(s) 95, 248
Hin1II CATG 5 cut(s) 187, 203, 527, 1177, 1406
HincII GTYRAC 5 cut(s) 38, 313, 556, 1535, 1743
HindII GTYRAC 5 cut(s) 38, 313, 556, 1535, 1743
HinfI GANTC 3 cut(s) 362, 647, 1489
HphI GGTGA 5 cut(s) 293, 383, 1208, 1455, 1593
Hpy188I TCNGA 6 cut(s) 146, 264, 336, 675, 921, 1504
Hpy99I CGWCG 3 cut(s) 42, 111, 494
HpyAV CCTTC 3 cut(s) 147, 625, 1367
HpyCH4III ACNGT 6 cut(s) 725, 833, 841, 1233, 1461, 1747
HpyCH4IV ACGT 1 cut(s) 1428
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 148, 1007, 1637
HpyF3I CTNAG 7 cut(s) 102, 300, 550, 624, 885, 1736, 1809
HpySE526I ACGT 1 cut(s) 1428
Hsp92II CATG 5 cut(s) 187, 203, 527, 1177, 1406
KflI GGGWCCC 1 cut(s) 1436
Ksp22I TGATCA 2 cut(s) 373, 679
LmnI GCTCC 2 cut(s) 98, 147
Lsp1109I GCAGC 5 cut(s) 70, 359, 868, 1082, 1618
LweI GCATC 7 cut(s) 158, 598, 868, 896, 912, 973, 1599
MaeI CTAG 4 cut(s) 386, 798, 1067, 1116
MaeII ACGT 1 cut(s) 1428
MaeIII GTNAC 3 cut(s) 1209, 1417, 1461
MboII GAAGA 7 cut(s) 323, 509, 539, 770, 1005, 1268, 1717
MfeI CAATTG 2 cut(s) 1383, 1470
MflI RGATCY 3 cut(s) 328, 544, 1282
MlyI GAGTC 2 cut(s) 371, 656
MmeI TCCRAC 2 cut(s) 1149, 1729
MnlI CCTC 9 cut(s) 104, 309, 728, 731, 760, 1662, 1711, 1731, 1758
MseI TTAA 7 cut(s) 582, 794, 858, 1040, 1077, 1674, 1803
MspA1I CMGCKG 1 cut(s) 1112
MspR9I CCNGG 3 cut(s) 96, 1433, 1562
MunI CAATTG 2 cut(s) 1383, 1470
MvaI CCWGG 3 cut(s) 96, 1433, 1562
MvnI CGCG 1 cut(s) 978
MwoI GCNNNNNNNGC 4 cut(s) 14, 148, 1007, 1637
NdeI CATATG 1 cut(s) 399
NheI GCTAGC 1 cut(s) 1115
NlaIII CATG 5 cut(s) 187, 203, 527, 1177, 1406
NlaIV GGNNCC 6 cut(s) 175, 546, 1284, 1437, 1438, 1592
NmuCI GTSAC 1 cut(s) 1461
NspI RCATGY 1 cut(s) 1177
PagI TCATGA 1 cut(s) 183
PaqCI CACCTGC 1 cut(s) 1474
PciI ACATGT 1 cut(s) 1173
PfeI GAWTC 1 cut(s) 1489
PfoI TCCNGGA 1 cut(s) 94
PkrI GCNGC 7 cut(s) 85, 349, 522, 883, 1072, 1114, 1633
PleI GAGTC 2 cut(s) 370, 655
PpsI GAGTC 2 cut(s) 370, 655
PpuMI RGGWCCY 2 cut(s) 1436, 1590
PscI ACATGT 1 cut(s) 1173
PshAI GACNNNNGTC 1 cut(s) 1427
PshBI ATTAAT 1 cut(s) 1040
Psp5II RGGWCCY 2 cut(s) 1436, 1590
Psp6I CCWGG 3 cut(s) 94, 1431, 1560
PspGI CCWGG 3 cut(s) 94, 1431, 1560
PspN4I GGNNCC 6 cut(s) 175, 546, 1284, 1437, 1438, 1592
PspPI GGNCC 3 cut(s) 743, 1436, 1590
PspPPI RGGWCCY 2 cut(s) 1436, 1590
PstI CTGCAG 1 cut(s) 1247
PstNI CAGNNNCTG 1 cut(s) 307
PsuI RGATCY 3 cut(s) 328, 544, 1282
RsaI GTAC 5 cut(s) 429, 697, 993, 1093, 1167
RsaNI GTAC 5 cut(s) 428, 696, 992, 1092, 1166
SalI GTCGAC 1 cut(s) 36
SaqAI TTAA 7 cut(s) 582, 794, 858, 1040, 1077, 1674, 1803
SatI GCNGC 7 cut(s) 84, 348, 521, 882, 1071, 1113, 1632
Sau96I GGNCC 3 cut(s) 743, 1436, 1590
ScaI AGTACT 1 cut(s) 697
SchI GAGTC 2 cut(s) 371, 656
ScrFI CCNGG 3 cut(s) 96, 1433, 1562
SfaNI GCATC 7 cut(s) 158, 598, 868, 896, 912, 973, 1599
SfcI CTRYAG 1 cut(s) 1243
SinI GGWCC 3 cut(s) 743, 1436, 1590
SmlI CTYRAG 3 cut(s) 133, 415, 910
SmoI CTYRAG 3 cut(s) 133, 415, 910
SsiI CCGC 6 cut(s) 67, 171, 520, 978, 1112, 1840
SspMI CTAG 4 cut(s) 386, 798, 1067, 1116
StyD4I CCNGG 3 cut(s) 94, 1431, 1560
StyI CCWWGG 4 cut(s) 1440, 1604, 1656, 1829
TaaI ACNGT 6 cut(s) 725, 833, 841, 1233, 1461, 1747
TaiI ACGT 1 cut(s) 1431
TaqI TCGA 6 cut(s) 37, 76, 109, 931, 945, 1031
TatI WGTACW 2 cut(s) 427, 695
TauI GCSGC 2 cut(s) 523, 1115
TfiI GAWTC 1 cut(s) 1489
Tru1I TTAA 7 cut(s) 582, 794, 858, 1040, 1077, 1674, 1803
Tru9I TTAA 7 cut(s) 582, 794, 858, 1040, 1077, 1674, 1803
TseFI GTSAC 1 cut(s) 1461
TseI GCWGC 5 cut(s) 83, 347, 881, 1070, 1631
Tsp45I GTSAC 1 cut(s) 1461
TspGWI ACGGA 1 cut(s) 1793
VpaK11BI GGWCC 3 cut(s) 743, 1436, 1590
VspI ATTAAT 1 cut(s) 1040
XapI RAATTY 7 cut(s) 232, 480, 669, 1337, 1498, 1647, 1721
XceI RCATGY 1 cut(s) 1177
XcmI CCANNNNNNNNNTGG 2 cut(s) 513, 1568
XmiI GTMKAC 2 cut(s) 37, 1769
XspI CTAG 4 cut(s) 386, 798, 1067, 1116
ZrmI AGTACT 1 cut(s) 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.