Rh5AG490200

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000089
Physical Location & Seq
Forward (+)
83545424 .. 83547386
1963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG490200.1

Sequence Viewer

Length: 1233 bp
ATGATTGGAGGAACCTTGGTGATGACCTTAAAGTACCATTATGGGAAGAAGTTCAGGCAAGATACATCTTGGATGAAGAATGGCAAAAAGATCAAAGAACAAACAAGAAAGACTTCAGCTCAACCAGACAACATACCAACTTTAGCAATTTGGAAGAAGTTTGTCAAGACAAAAACAAGTCCAACATTTAAGGCTATAAGTGACAAGTACAAGGCATTGAGGCGTAAACAAGTACCACACACATGCAGTCGCAAGGGAATGGTTCGATTAGCAGCTGATATGAAAAGAGATAGTGCCAACCCATCTTCAGTGTCAAGGGTTAAAGTTTGGATCAAATCTCGCACAAAAAAAGATGGTACACGTGTGAATACAGCAATTGGTGAAACTATTGAGAAGTTAAGAGAAGTTGAAAGTAATTCACCCTCATCCTCAACAACTAATGTGAGAGAAGATGCTCTTTCCCAAGTACTAGGACAAGATAAACCTGGACGATTAAGAGGAATGGGAAGAGGAGTTACTATAAGCAAATTAGCCTTCTTACAGTCTAGGGACAAGCATGTGCTCCAGCTAGAAGAGCAACACACTGATATGCGAAGTAGAATCAAGCATTTAGAGAGCTTAGTCCATAAATTAATTGGACATCATGAGACAATGCAAAATGAGAAAGATAAAAATGAGCAAAATGGGTCTCAAGTTGACAAGACTTCTCCAGTGTGCAAGCTTTTAGATTGGTGTGGAATGGATGAGATTGTAGCCGAAGGACGTTGGTGTTCCAGTGATCCGAATGAGCTTGTCAATCATACTCATGTTGGACCTAATGCAATGAAAGTGAGGGTAGATATTCCAAACAAACCAGAAGCTTTTCTTTGGAAGCCTGCACCTAATATGAGTTGTATGGAACAAGCTCAAGGTAAGACATTAGCGTGGCCAGCTGATAAAGTGGTCTTGCAAATCAGTCAGCAATCTGAGAATGAAGATAATATATCTATGCCTTCGAGTAAAAACATGAATTCTATCAAGTGCAAGTTGTTCAATTGGAGTGGAAAAGAGGAAATAGTTGCTGAAGGTCGTTGGTTCTCTAATGATCCAAAGATGCTTGTTAATGATATTCCTCTCGGACCTAATGTCATGATAGTTTGGGTTGATATCCCAACATGTCCTGAAGCATTTTTATGGAGACCTACGCCTAACATGACATATATTGAAGATGCTATTGGCACTAAAGTAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_23 Transposase_24

Protein Analysis

410

Amino Acids

46.39

Weight (kDa)

9.56

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 50 - 173 1.1e-21 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 338, 773, 1079
AcoI YGGCCR 1 cut(s) 926
AcsI RAATTY 1 cut(s) 1009
AcuI CTGAAG 4 cut(s) 99, 291, 1083, 1182
AcvI CACGTG 1 cut(s) 362
AfaI GTAC 5 cut(s) 35, 209, 234, 358, 468
AflIII ACRYGT 3 cut(s) 359, 361, 1154
AgsI TTSAA 3 cut(s) 410, 1033, 1205
AhdI GACNNNNNGTC 1 cut(s) 1124
AjnI CCWGG 1 cut(s) 484
AjuI GAANNNNNNNTTGG 2 cut(s) 1197, 1229
AluBI AGCT 9 cut(s) 119, 275, 568, 618, 721, 790, 860, 905, 932
AluI AGCT 9 cut(s) 119, 275, 568, 618, 721, 790, 860, 905, 932
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 3 cut(s) 641, 693, 1171
AlwI GGATC 3 cut(s) 338, 773, 1079
AoxI GGCC 1 cut(s) 926
ApeKI GCWGC 1 cut(s) 272
ApoI RAATTY 1 cut(s) 1009
AseI ATTAAT 1 cut(s) 632
Asp700I GAANNNNTTC 3 cut(s) 50, 112, 861
AspS9I GGNCC 2 cut(s) 812, 1118
AsuHPI GGTGA 3 cut(s) 31, 392, 411
AvaII GGWCC 2 cut(s) 812, 1118
BaeI ACNNNNGTAYC 2 cut(s) 348, 381
BalI TGGCCA 1 cut(s) 928
BarI GAAGNNNNNNTAC 2 cut(s) 499, 531
BbrPI CACGTG 1 cut(s) 362
Bbv12I GWGCWC 1 cut(s) 564
BbvI GCAGC 1 cut(s) 284
BccI CCATC 2 cut(s) 310, 347
BciT130I CCWGG 1 cut(s) 486
BcoDI GTCTC 3 cut(s) 641, 693, 1171
BfaI CTAG 3 cut(s) 470, 546, 569
BisI GCNGC 1 cut(s) 273
BlsI GCNGC 1 cut(s) 274
BmcAI AGTACT 1 cut(s) 468
Bme1390I CCNGG 1 cut(s) 486
Bme18I GGWCC 2 cut(s) 812, 1118
BmeRI GACNNNNNGTC 1 cut(s) 1124
BmgT120I GGNCC 2 cut(s) 812, 1118
BmiI GGNNCC 1 cut(s) 13
BmrFI CCNGG 1 cut(s) 486
BmsI GCATC 3 cut(s) 442, 1083, 1198
BpmI CTGGAG 2 cut(s) 548, 693
BpuEI CTTGAG 2 cut(s) 675, 891
BsaAI YACGTR 1 cut(s) 362
BsaI GGTCTC 2 cut(s) 693, 1171
BsaJI CCNNGG 1 cut(s) 15
Bse1I ACTGG 2 cut(s) 710, 774
Bse3DI GCAATG 1 cut(s) 828
BseBI CCWGG 1 cut(s) 486
BseDI CCNNGG 1 cut(s) 15
BseGI GGATG 3 cut(s) 78, 425, 748
BseMI GCAATG 1 cut(s) 828
BseMII CTCAG 1 cut(s) 957
BseNI ACTGG 2 cut(s) 710, 774
BseRI GAGGAG 1 cut(s) 525
BseXI GCAGC 1 cut(s) 284
BsgI GTGCAG 1 cut(s) 861
BshFI GGCC 1 cut(s) 928
BsiHKAI GWGCWC 1 cut(s) 564
BslFI GGGAC 1 cut(s) 563
BsmAI GTCTC 3 cut(s) 641, 693, 1171
BsmFI GGGAC 1 cut(s) 563
BsnI GGCC 1 cut(s) 928
Bso31I GGTCTC 2 cut(s) 693, 1171
Bsp1286I GDGCHC 1 cut(s) 564
Bsp143I GATC 4 cut(s) 90, 330, 778, 1084
BspANI GGCC 1 cut(s) 928
BspCNI CTCAG 1 cut(s) 958
BspHI TCATGA 2 cut(s) 643, 1128
BspLI GGNNCC 1 cut(s) 13
BspPI GGATC 3 cut(s) 338, 773, 1079
BspQI GCTCTTC 1 cut(s) 567
BspTNI GGTCTC 2 cut(s) 693, 1171
BsrDI GCAATG 1 cut(s) 828
BsrI ACTGG 2 cut(s) 710, 774
BssECI CCNNGG 1 cut(s) 15
BssMI GATC 4 cut(s) 90, 330, 778, 1084
BssT1I CCWWGG 1 cut(s) 15
Bst2UI CCWGG 1 cut(s) 486
Bst4CI ACNGT 1 cut(s) 543
Bst6I CTCTTC 2 cut(s) 502, 567
BstBAI YACGTR 1 cut(s) 362
BstC8I GCNNGC 3 cut(s) 719, 876, 930
BstDEI CTNAG 2 cut(s) 619, 966
BstF5I GGATG 3 cut(s) 78, 425, 748
BstKTI GATC 4 cut(s) 93, 333, 781, 1087
BstMAI GTCTC 3 cut(s) 641, 693, 1171
BstMBI GATC 4 cut(s) 90, 330, 778, 1084
BstMWI GCNNNNNNNGC 2 cut(s) 574, 929
BstNI CCWGG 1 cut(s) 486
BstNSI RCATGY 3 cut(s) 246, 560, 1158
BstSCI CCNGG 1 cut(s) 484
BstV1I GCAGC 1 cut(s) 284
BsuRI GGCC 1 cut(s) 928
BtsCI GGATG 3 cut(s) 78, 425, 748
BtsIMutI CAGTG 4 cut(s) 315, 582, 717, 781
Cac8I GCNNGC 3 cut(s) 719, 876, 930
CciI TCATGA 2 cut(s) 643, 1128
Cfr13I GGNCC 2 cut(s) 812, 1118
Csp6I GTAC 5 cut(s) 34, 208, 233, 357, 467
CspCI CAANNNNNGTGG 2 cut(s) 1021, 1056
CviAII CATG 9 cut(s) 243, 557, 644, 806, 1006, 1129, 1155, 1192, 1230
CviQI GTAC 5 cut(s) 34, 208, 233, 357, 467
DdeI CTNAG 2 cut(s) 619, 966
DpnI GATC 4 cut(s) 92, 332, 780, 1086
DpnII GATC 4 cut(s) 90, 330, 778, 1084
DriI GACNNNNNGTC 1 cut(s) 1124
EaeI YGGCCR 1 cut(s) 926
Eam1104I CTCTTC 2 cut(s) 502, 567
Eam1105I GACNNNNNGTC 1 cut(s) 1124
EarI CTCTTC 2 cut(s) 502, 567
Eco130I CCWWGG 1 cut(s) 15
Eco31I GGTCTC 2 cut(s) 693, 1171
Eco32I GATATC 1 cut(s) 1147
Eco47I GGWCC 2 cut(s) 812, 1118
Eco57I CTGAAG 4 cut(s) 99, 291, 1083, 1182
Eco72I CACGTG 1 cut(s) 362
EcoRI GAATTC 1 cut(s) 1009
EcoRII CCWGG 1 cut(s) 484
EcoRV GATATC 1 cut(s) 1147
EcoT14I CCWWGG 1 cut(s) 15
ErhI CCWWGG 1 cut(s) 15
FaeI CATG 9 cut(s) 246, 560, 647, 809, 1009, 1132, 1158, 1195, 1233
FalI AAGNNNNNCTT 6 cut(s) 97, 129, 441, 473, 849, 881
FaqI GGGAC 1 cut(s) 563
FatI CATG 9 cut(s) 242, 556, 643, 805, 1005, 1128, 1154, 1191, 1229
Fnu4HI GCNGC 1 cut(s) 273
FokI GGATG 3 cut(s) 85, 412, 755
Fsp4HI GCNGC 1 cut(s) 273
FspBI CTAG 3 cut(s) 470, 546, 569
GluI GCNGC 1 cut(s) 273
GsuI CTGGAG 2 cut(s) 548, 693
HaeIII GGCC 1 cut(s) 928
Hin1II CATG 9 cut(s) 246, 560, 647, 809, 1009, 1132, 1158, 1195, 1233
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HindIII AAGCTT 2 cut(s) 719, 858
HinfI GANTC 1 cut(s) 600
HphI GGTGA 3 cut(s) 31, 392, 411
Hpy166II GTNNAC 3 cut(s) 227, 359, 697
Hpy188I TCNGA 3 cut(s) 783, 967, 1118
Hpy188III TCNNGA 4 cut(s) 166, 644, 1129, 1160
Hpy8I GTNNAC 3 cut(s) 227, 359, 697
HpyAV CCTTC 4 cut(s) 544, 752, 1002, 1058
HpyCH4III ACNGT 1 cut(s) 543
HpyCH4IV ACGT 2 cut(s) 361, 763
HpyCH4V TGCA 7 cut(s) 246, 655, 717, 821, 878, 949, 1023
HpyF10VI GCNNNNNNNGC 2 cut(s) 574, 929
HpyF3I CTNAG 2 cut(s) 619, 966
HpySE526I ACGT 2 cut(s) 361, 763
Hsp92II CATG 9 cut(s) 246, 560, 647, 809, 1009, 1132, 1158, 1195, 1233
Kzo9I GATC 4 cut(s) 90, 330, 778, 1084
LguI GCTCTTC 1 cut(s) 567
LmnI GCTCC 1 cut(s) 567
Lsp1109I GCAGC 1 cut(s) 284
LweI GCATC 3 cut(s) 442, 1083, 1198
MaeI CTAG 3 cut(s) 470, 546, 569
MaeII ACGT 2 cut(s) 361, 763
MaeIII GTNAC 2 cut(s) 200, 514
MalI GATC 4 cut(s) 92, 332, 780, 1086
MboI GATC 4 cut(s) 90, 330, 778, 1084
MboII GAAGA 9 cut(s) 58, 88, 166, 297, 461, 519, 584, 986, 1217
MfeI CAATTG 2 cut(s) 375, 1033
MhlI GDGCHC 1 cut(s) 564
MlsI TGGCCA 1 cut(s) 928
MluCI AATT 8 cut(s) 147, 375, 415, 527, 629, 633, 1009, 1033
MluNI TGGCCA 1 cut(s) 928
MmeI TCCRAC 2 cut(s) 206, 790
MnlI CCTC 8 cut(s) 213, 433, 439, 491, 503, 825, 1042, 1122
Mox20I TGGCCA 1 cut(s) 928
MroXI GAANNNNTTC 3 cut(s) 50, 112, 861
MscI TGGCCA 1 cut(s) 928
MseI TTAA 7 cut(s) 29, 189, 321, 398, 494, 632, 1101
MslI CAYNNNNRTG 5 cut(s) 241, 587, 804, 922, 1171
Msp20I TGGCCA 1 cut(s) 928
MspA1I CMGCKG 2 cut(s) 275, 932
MspR9I CCNGG 1 cut(s) 486
MunI CAATTG 2 cut(s) 375, 1033
MvaI CCWGG 1 cut(s) 486
MwoI GCNNNNNNNGC 2 cut(s) 574, 929
NdeII GATC 4 cut(s) 90, 330, 778, 1084
NlaIII CATG 9 cut(s) 246, 560, 647, 809, 1009, 1132, 1158, 1195, 1233
NlaIV GGNNCC 1 cut(s) 13
NmuCI GTSAC 1 cut(s) 200
NspI RCATGY 3 cut(s) 246, 560, 1158
PagI TCATGA 2 cut(s) 643, 1128
PciI ACATGT 1 cut(s) 1154
PciSI GCTCTTC 1 cut(s) 567
PdmI GAANNNNTTC 3 cut(s) 50, 112, 861
PfeI GAWTC 1 cut(s) 600
PkrI GCNGC 1 cut(s) 274
PmaCI CACGTG 1 cut(s) 362
PmlI CACGTG 1 cut(s) 362
Ppu21I YACGTR 1 cut(s) 362
PscI ACATGT 1 cut(s) 1154
PshBI ATTAAT 1 cut(s) 632
Psp6I CCWGG 1 cut(s) 484
PspCI CACGTG 1 cut(s) 362
PspGI CCWGG 1 cut(s) 484
PspN4I GGNNCC 1 cut(s) 13
PspPI GGNCC 2 cut(s) 812, 1118
PvuII CAGCTG 2 cut(s) 275, 932
RsaI GTAC 5 cut(s) 35, 209, 234, 358, 468
RsaNI GTAC 5 cut(s) 34, 208, 233, 357, 467
RseI CAYNNNNRTG 5 cut(s) 241, 587, 804, 922, 1171
SapI GCTCTTC 1 cut(s) 567
SaqAI TTAA 7 cut(s) 29, 189, 321, 398, 494, 632, 1101
SatI GCNGC 1 cut(s) 273
Sau3AI GATC 4 cut(s) 90, 330, 778, 1084
Sau96I GGNCC 2 cut(s) 812, 1118
ScaI AGTACT 1 cut(s) 468
ScrFI CCNGG 1 cut(s) 486
SduI GDGCHC 1 cut(s) 564
SfaNI GCATC 3 cut(s) 442, 1083, 1198
SinI GGWCC 2 cut(s) 812, 1118
SmiMI CAYNNNNRTG 5 cut(s) 241, 587, 804, 922, 1171
SmlI CTYRAG 2 cut(s) 690, 906
SmoI CTYRAG 2 cut(s) 690, 906
Sse9I AATT 8 cut(s) 147, 375, 415, 527, 629, 633, 1009, 1033
SspMI CTAG 3 cut(s) 470, 546, 569
StyD4I CCNGG 1 cut(s) 484
StyI CCWWGG 1 cut(s) 15
TaaI ACNGT 1 cut(s) 543
TaiI ACGT 2 cut(s) 364, 766
TaqI TCGA 2 cut(s) 265, 995
TasI AATT 8 cut(s) 147, 375, 415, 527, 629, 633, 1009, 1033
TatI WGTACW 2 cut(s) 207, 466
TfiI GAWTC 1 cut(s) 600
Tru1I TTAA 7 cut(s) 29, 189, 321, 398, 494, 632, 1101
Tru9I TTAA 7 cut(s) 29, 189, 321, 398, 494, 632, 1101
TscAI CASTG 4 cut(s) 315, 589, 717, 781
TseFI GTSAC 1 cut(s) 200
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 1 cut(s) 200
TspDTI ATGAA 5 cut(s) 89, 296, 839, 987, 1022
TspRI CASTG 4 cut(s) 315, 589, 717, 781
VpaK11BI GGWCC 2 cut(s) 812, 1118
VspI ATTAAT 1 cut(s) 632
XapI RAATTY 1 cut(s) 1009
XceI RCATGY 3 cut(s) 246, 560, 1158
XcmI CCANNNNNNNNNTGG 1 cut(s) 632
XmnI GAANNNNTTC 3 cut(s) 50, 112, 861
XspI CTAG 3 cut(s) 470, 546, 569
ZrmI AGTACT 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.