Rorug01G0072100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000089
Physical Location & Seq
Reverse (-)
11767296 .. 11768624
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0072100.1

Sequence Viewer

Length: 1329 bp
ATGCCAGCCAAATTGGGAAGATTGATCAACTTGAGCCATCTGGATATTACGGAGACAAAGTTAAAAAAGATGCCACCACAAATGGGTAAGTTGAAAGACCTCCAGATGCTACCAGAGTTTGTGCTAGACAAACACAATGCTGGGGATAATTTGCCGGAGTTAAAGAAGCTTGAAAAATTGCGTGGAAGACTTTGTATCTCAGGGCTTGTGCATAGCAGCGGTTTGGAGGCTTACATTCTGAGGGGCAAGAAGTTTCTTAAGGAACTGGTTTTGGATTGGAGAGGAAGGGATTCAAGTGAAGAATGCAATAATACTATAGAAGAAAGAGAAGTACTTGAGAAGCTCCAACCTCACCTGAACCTGGAAAGGCTTACAATTAAAGGTTATGGAGGCAAAATGTTTCCAGGTTGGTCAGAATATTATTCTTCCTCTGCTCTTGTTTATCTTAAACTTGTTAATTGTGAGAATTGTATCTCCTTGCCACCATTGGGACAGCTACCTTCCCTCAGAGAGCTTTATATTTCTGGGTTACATGGAGTGGTGTCCATAGGTTCTGAATTCTATTATGGTGACGGCAATACTATTACTACTAGTGTGAATAAACCATTTAGATCTCTACGGGCTTTAAAATTCTACAATATGAGTGGGTGGCAAGAATGGTCACGTGGGGTTTTTCCTAATCTTATTCAACTTGAAGTATCATGCTGTCCCAATCTTACCGGGAGATTAGCGTCAGACAGCAGTCTCCCATCTCTCGTGTCTTTGGAGGTATGGAATTGCCCGGAATTTGAATGTTTTCCGGAAGATGGATTCCCGTCAAAGTTAAAATCACTTGACATCAGCGACTGTAAAAAAGTGAATGCAAAGAGCATGCAGAATCTGAACAAGGGTCTCCGAACACTCACCTCTCTTGAAAAATTGTCACTTGATTTTGACTGCGACGAAAAAGTAGATTGGTTTGCGGAGGAGCAGGAGGGGCTGTTGCCCAGCACTCTCACATATCTAAAGATCTGCCGTCTGAATTGTGAGACCATCGACGGCGCCAAGTGGTTTGGCCATCTCAACTCTCTTCAAGAATTGGATATTTGGGATTGCCCTGCGCTCTGGTGCTTGCCAGATAGTGGGCTTCCCACTTCTCTTCAACGCTTGCAGATTTTGTGGTGCCCTGCTCTACAGTGCTTGCCAGATAGTGGACTACCCTCTTCTCTTTCTGATCTAAATATCTATGGATGTCCTTTGCTTGATGAACGGTGCCAAAGAGAGACGGGTGAAGATTGGCCCAAGATTGCTCACATCAAGTGCATAGATATCAACTGGAAAACGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_23

Protein Analysis

442

Amino Acids

50.02

Weight (kDa)

5.68

Isoelectric Point (pI)

51.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 1 - 256 2.9e-13 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 52 - 176 5.9e-32 R13L1/DRL21 LRRs
LRR_R13L1-DRL21 PF25019 276 - 385 3.6e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42700
fragaria_vesca FvH4_1g29233 FvH4_1g29373 FvH4_2g07142 FvH4_2g08144 FvH4_3g21852 FvH4_3g29221 FvH4_3g32731 FvH4_3g45091 FvH4_4g01311 FvH4_4g03220 FvH4_4g06631 FvH4_4g10040 FvH4_4g10363 FvH4_4g12371 FvH4_4g15323 FvH4_4g15580 FvH4_4g16173 FvH4_5g18843 FvH4_5g23172 FvH4_5g27660 FvH4_5g37213 FvH4_6g17382 FvH4_6g20172 FvH4_6g20173 FvH4_6g21082 FvH4_6g35541
malus_domestica MD02G1251500.v1.1 MD02G1252300.v1.1
pyrus_communis pycom01g02580 pycom01g08340 pycom01g08610 pycom11g01520 pycom12g04790
rosa_chinensis RchiOBHm_Chr0c16g0499821 RchiOBHm_Chr0c16g0499871 RchiOBHm_Chr0c28g0501051 RchiOBHm_Chr1g0313071 RchiOBHm_Chr1g0315701 RchiOBHm_Chr1g0318841 RchiOBHm_Chr1g0326261 RchiOBHm_Chr1g0357501 RchiOBHm_Chr2g0133581 RchiOBHm_Chr2g0134701 RchiOBHm_Chr2g0152521 RchiOBHm_Chr3g0455961 RchiOBHm_Chr3g0458231 RchiOBHm_Chr3g0460621 RchiOBHm_Chr3g0492791 RchiOBHm_Chr3g0492801 RchiOBHm_Chr3g0496631 RchiOBHm_Chr3g0496641 RchiOBHm_Chr4g0386541 RchiOBHm_Chr4g0415851 RchiOBHm_Chr4g0420561 RchiOBHm_Chr4g0422721 RchiOBHm_Chr4g0433611 RchiOBHm_Chr4g0444771 RchiOBHm_Chr5g0033771 RchiOBHm_Chr5g0059371 RchiOBHm_Chr5g0060161 RchiOBHm_Chr5g0064791 RchiOBHm_Chr5g0064801 RchiOBHm_Chr6g0269851 RchiOBHm_Chr6g0280321 RchiOBHm_Chr6g0287111 RchiOBHm_Chr7g0177401 RchiOBHm_Chr7g0200581 RchiOBHm_Chr7g0200591 RchiOBHm_Chr7g0231331
rosa_laevigata RLG00000001052 RLG00000001162 RLG00000002271 RLG00000002679 RLG00000007743 RLG00000009828 RLG00000009891 RLG00000009895 RLG00000009898 RLG00000017129 RLG00000018019 RLG00000018832 RLG00000018849 RLG00000019409 RLG00000019469 RLG00000019633 RLG00000019682 RLG00000020304 RLG00000024132 RLG00000027333 RLG00000028566 RLG00000031685 RLG00000031699 RLG00000034060 RLG00000034663 RLG00000035858 RLG00000036314
rosa_multiflora Rmu_sc0000178.1_g000001 Rmu_sc0000847.1_g000010 Rmu_sc0000861.1_g000033 Rmu_sc0001043.1_g000008 Rmu_sc0001499.1_g000050 Rmu_sc0001572.1_g000045 Rmu_sc0001768.1_g000043 Rmu_sc0001824.1_g000038 Rmu_sc0002037.1_g000022 Rmu_sc0002042.1_g000011 Rmu_sc0002322.1_g000001 Rmu_sc0002401.1_g000002 Rmu_sc0002438.1_g000018 Rmu_sc0002648.1_g000010 Rmu_sc0002784.1_g000047 Rmu_sc0003776.1_g000004 Rmu_sc0003780.1_g000005 Rmu_sc0004140.1_g000039 Rmu_sc0004596.1_g000033 Rmu_sc0004866.1_g000040 Rmu_sc0004964.1_g000011 Rmu_sc0005065.1_g000039 Rmu_sc0005137.1_g000032 Rmu_sc0005294.1_g000031 Rmu_sc0005426.1_g000005 Rmu_sc0005789.1_g000017 Rmu_sc0007891.1_g000008 Rmu_sc0008554.1_g000002 Rmu_sc0011363.1_g000002 Rmu_sc0020081.1_g000001 Rmu_ssc0000079.1_g000015
rosa_roxburghii Rroxscaffold_1G00010060 Rroxscaffold_1G00013840 Rroxscaffold_1G00031540 Rroxscaffold_1G00039640 Rroxscaffold_1G00048530 Rroxscaffold_2G00093720 Rroxscaffold_2G00093730 Rroxscaffold_2G00109830 Rroxscaffold_2G00109890 Rroxscaffold_2G00149920 Rroxscaffold_3G00274720 Rroxscaffold_4G00300310 Rroxscaffold_5G00347510 Rroxscaffold_5G00360920 Rroxscaffold_5G00362090 Rroxscaffold_5G00368170 Rroxscaffold_6G00391580 Rroxscaffold_7G00181720 Rroxscaffold_7G00209870
rosa_rugosa Rorug01G0071800 Rorug01G0071900 Rorug01G0072000 Rorug01G0072100 Rorug01G0084700 Rorug01G0104500 Rorug01G0104500 Rorug01G0134900.1 Rorug01G0135000.1 Rorug01G0183500 Rorug01G0256500 Rorug01G0312300 Rorug01G0312400 Rorug01G0351500 Rorug01G0384100 Rorug02G0039300 Rorug02G0319100 Rorug02G0319200 Rorug02G0319300 Rorug02G0461700 Rorug02G0531700 Rorug02G0617600 Rorug03G0155300 Rorug03G0190400 Rorug03G0248900 Rorug03G0249000 Rorug05G0141900 Rorug05G0325500 Rorug05G0325600 Rorug05G0369600 Rorug05G0490000 Rorug05G0490100.1 Rorug06G0009300 Rorug06G0035500 Rorug06G0082200 Rorug06G0133600 Rorug06G0133700 Rorug06G0149500 Rorug06G0149600 Rorug06G0149700 Rorug06G0351300 Rorug06G0443300 Rorug06G0443400 Rorug06G0443500 Rorug06G0443500 Rorug06G0443500 Rorug06G0480000 Rorug07G0260700 Rorug07G0260800 Rorug07G0289600 Rorug07G0289700 Rorug07G0319200 Rorug07G0319300
rosa_samantha Rh1AG098300 Rh1BG003900 Rh1BG262700 Rh1CG054000 Rh1CG054100 Rh1CG054200 Rh1CG232800 Rh1DG058300 Rh1DG058400 Rh1DG058500 Rh1DG085300 Rh1DG137700 Rh2AG234800 Rh2BG248300 Rh2CG045400 Rh2CG239300 Rh2CG239400 Rh2CG326600 Rh2CG349000 Rh2CG355400 Rh2CG402000 Rh2DG001000 Rh2DG242300 Rh3AG001600 Rh3AG306500 Rh3BG373600 Rh3CG001300 Rh3CG365600 Rh4AG013600 Rh4AG178000 Rh4AG198400 Rh4AG198600 Rh4AG416100 Rh4AG416300 Rh4BG029700 Rh4BG138600 Rh4BG150700 Rh4BG196400 Rh4BG427400 Rh4BG427600 Rh4CG442400 Rh4CG442500 Rh4DG171400 Rh4DG171500 Rh4DG171600 Rh4DG196200 Rh4DG423300 Rh4DG423400 Rh5AG490200 Rh5CG422300 Rh5CG428400 Rh5CG513400 Rh5CG519500 Rh5CG579300 Rh6AG225400 Rh6BG053200 Rh6BG195500 Rh6BG245600 Rh6DG161700 Rh6DG238400 Rh7AG348200 Rh7AG396700 Rh7AG396800 Rh7AG410600 Rh7BG445300 Rh7CG255900 Rh7CG365800 Rh7CG415100 Rh7CG415200 Rh7DG191000 Rh7DG191100 Rh7DG362700
rosa_wichuraiana Rw1G003060 Rw2G017950 Rw2G019900 Rw2G038280 Rw2G048340 Rw3G026970 Rw4G006460 Rw4G009350 Rw4G016820 Rw5G034510 Rw5G049530 Rw6G004160 Rw7G032270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 1040, 1161, 1251
AccB7I CCANNNNNTGG 2 cut(s) 1121, 1190
AccIII TCCGGA 1 cut(s) 799
AciI CCGC 2 cut(s) 219, 962
AcoI YGGCCR 1 cut(s) 1054
AcsI RAATTY 3 cut(s) 557, 629, 785
AcvI CACGTG 1 cut(s) 665
AcyI GRCGYC 1 cut(s) 1041
AfaI GTAC 1 cut(s) 333
AfiI CCNNNNNNNGG 6 cut(s) 83, 361, 488, 806, 1121, 1190
AflII CTTAAG 1 cut(s) 257
AgsI TTSAA 9 cut(s) 94, 173, 294, 689, 695, 791, 914, 1073, 1142
AhlI ACTAGT 1 cut(s) 590
AjnI CCWGG 2 cut(s) 360, 403
AluBI AGCT 4 cut(s) 169, 343, 496, 514
AluI AGCT 4 cut(s) 169, 343, 496, 514
Alw26I GTCTC 5 cut(s) 47, 749, 896, 1022, 1256
AlwNI CAGNNNCTG 2 cut(s) 846, 880
Aor13HI TCCGGA 1 cut(s) 799
AoxI GGCC 2 cut(s) 1054, 1277
ApeKI GCWGC 1 cut(s) 216
ApoI RAATTY 3 cut(s) 557, 629, 785
Asp700I GAANNNNTTC 2 cut(s) 289, 795
AspLEI GCGC 2 cut(s) 1043, 1102
AspS9I GGNCC 1 cut(s) 1278
AsuC2I CCSGG 2 cut(s) 721, 782
AsuHPI GGTGA 4 cut(s) 344, 581, 895, 1280
BaeGI GKGCMC 1 cut(s) 1166
BalI TGGCCA 1 cut(s) 1056
BanI GGYRCC 3 cut(s) 1040, 1161, 1251
BauI CACGAG 1 cut(s) 755
BbrPI CACGTG 1 cut(s) 665
BbsI GAAGAC 1 cut(s) 193
BbvI GCAGC 1 cut(s) 228
BccI CCATC 5 cut(s) 45, 757, 800, 1040, 1065
BceAI ACGGC 3 cut(s) 589, 999, 1054
BciT130I CCWGG 2 cut(s) 362, 405
BclI TGATCA 1 cut(s) 24
BcnI CCSGG 2 cut(s) 721, 782
BcoDI GTCTC 5 cut(s) 47, 749, 896, 1022, 1256
BcuI ACTAGT 1 cut(s) 590
BfaI CTAG 2 cut(s) 125, 591
BfmI CTRYAG 2 cut(s) 315, 1172
BfoI RGCGCY 1 cut(s) 1044
BfrI CTTAAG 1 cut(s) 257
BglII AGATCT 2 cut(s) 611, 1008
BisI GCNGC 1 cut(s) 217
BlsI GCNGC 1 cut(s) 218
BmcAI AGTACT 1 cut(s) 333
Bme1390I CCNGG 4 cut(s) 362, 405, 721, 782
BmgT120I GGNCC 1 cut(s) 1278
BmiI GGNNCC 3 cut(s) 1042, 1163, 1253
BmrFI CCNGG 4 cut(s) 362, 405, 721, 782
BmsI GCATC 2 cut(s) 60, 96
BoxI GACNNNNGTC 1 cut(s) 741
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 86
BpuEI CTTGAG 2 cut(s) 52, 356
BpuMI CCSGG 2 cut(s) 721, 782
BsaAI YACGTR 1 cut(s) 665
BsaHI GRCGYC 1 cut(s) 1041
BsaI GGTCTC 2 cut(s) 896, 1022
BsaWI WCCGGW 1 cut(s) 799
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 965, 995
Bsc4I CCNNNNNNNGG 6 cut(s) 83, 361, 488, 806, 1121, 1190
Bse1I ACTGG 2 cut(s) 270, 1319
BseAI TCCGGA 1 cut(s) 799
BseBI CCWGG 2 cut(s) 362, 405
BseGI GGATG 1 cut(s) 1235
BseLI CCNNNNNNNGG 6 cut(s) 83, 361, 488, 806, 1121, 1190
BseMII CTCAG 3 cut(s) 213, 230, 520
BseNI ACTGG 2 cut(s) 270, 1319
BseRI GAGGAG 1 cut(s) 980
BseSI GKGCMC 1 cut(s) 1166
BseXI GCAGC 1 cut(s) 228
BseYI CCCAGC 2 cut(s) 140, 986
BshFI GGCC 2 cut(s) 1056, 1279
BshNI GGYRCC 3 cut(s) 1040, 1161, 1251
BsiSI CCGG 4 cut(s) 155, 720, 782, 800
BslFI GGGAC 2 cut(s) 504, 693
BslI CCNNNNNNNGG 6 cut(s) 83, 361, 488, 806, 1121, 1190
BsmAI GTCTC 5 cut(s) 47, 749, 896, 1022, 1256
BsmBI CGTCTC 1 cut(s) 1256
BsmFI GGGAC 2 cut(s) 504, 693
BsmI GAATGC 2 cut(s) 308, 865
BsnI GGCC 2 cut(s) 1056, 1279
Bso31I GGTCTC 2 cut(s) 896, 1022
Bsp1286I GDGCHC 1 cut(s) 1166
Bsp13I TCCGGA 1 cut(s) 799
Bsp143I GATC 4 cut(s) 24, 611, 1008, 1213
BspACI CCGC 2 cut(s) 219, 962
BspANI GGCC 2 cut(s) 1056, 1279
BspCNI CTCAG 3 cut(s) 212, 231, 519
BspEI TCCGGA 1 cut(s) 799
BspLI GGNNCC 3 cut(s) 1042, 1163, 1253
BspT107I GGYRCC 3 cut(s) 1040, 1161, 1251
BspTI CTTAAG 1 cut(s) 257
BspTNI GGTCTC 2 cut(s) 896, 1022
BsrI ACTGG 2 cut(s) 270, 1319
BssMI GATC 4 cut(s) 24, 611, 1008, 1213
BssNI GRCGYC 1 cut(s) 1041
BssSI CACGAG 1 cut(s) 755
Bst2BI CACGAG 1 cut(s) 755
Bst2UI CCWGG 2 cut(s) 362, 405
Bst4CI ACNGT 3 cut(s) 848, 1176, 1251
Bst6I CTCTTC 3 cut(s) 1074, 1143, 1207
BstACI GRCGYC 1 cut(s) 1041
BstAFI CTTAAG 1 cut(s) 257
BstBAI YACGTR 1 cut(s) 665
BstC8I GCNNGC 5 cut(s) 6, 872, 1112, 1148, 1181
BstDEI CTNAG 3 cut(s) 199, 239, 506
BstF5I GGATG 1 cut(s) 1235
BstH2I RGCGCY 1 cut(s) 1044
BstHHI GCGC 2 cut(s) 1043, 1102
BstKTI GATC 4 cut(s) 27, 614, 1011, 1216
BstMAI GTCTC 5 cut(s) 47, 749, 896, 1022, 1256
BstMBI GATC 4 cut(s) 24, 611, 1008, 1213
BstMWI GCNNNNNNNGC 1 cut(s) 976
BstNI CCWGG 2 cut(s) 362, 405
BstNSI RCATGY 1 cut(s) 874
BstPAI GACNNNNGTC 1 cut(s) 741
BstSCI CCNGG 4 cut(s) 360, 403, 719, 780
BstSFI CTRYAG 2 cut(s) 315, 1172
BstSLI GKGCMC 1 cut(s) 1166
BstV1I GCAGC 1 cut(s) 228
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 2 cut(s) 611, 1008
BstYI RGATCY 2 cut(s) 611, 1008
BsuRI GGCC 2 cut(s) 1056, 1279
BtsCI GGATG 1 cut(s) 1235
BtsIMutI CAGTG 1 cut(s) 1181
Cac8I GCNNGC 5 cut(s) 6, 872, 1112, 1148, 1181
CaiI CAGNNNCTG 2 cut(s) 846, 880
CfoI GCGC 2 cut(s) 1043, 1102
Cfr13I GGNCC 1 cut(s) 1278
CseI GACGC 1 cut(s) 720
Csp6I GTAC 1 cut(s) 332
CspCI CAANNNNNGTGG 2 cut(s) 625, 660
CviAII CATG 3 cut(s) 533, 702, 871
CviQI GTAC 1 cut(s) 332
DdeI CTNAG 3 cut(s) 199, 239, 506
DinI GGCGCC 1 cut(s) 1042
DpnI GATC 4 cut(s) 26, 613, 1010, 1215
DpnII GATC 4 cut(s) 24, 611, 1008, 1213
DraI TTTAAA 1 cut(s) 627
EaeI YGGCCR 1 cut(s) 1054
Eam1104I CTCTTC 3 cut(s) 1074, 1143, 1207
EarI CTCTTC 3 cut(s) 1074, 1143, 1207
Eco31I GGTCTC 2 cut(s) 896, 1022
Eco32I GATATC 1 cut(s) 1309
Eco72I CACGTG 1 cut(s) 665
EcoRI GAATTC 1 cut(s) 557
EcoRII CCWGG 2 cut(s) 360, 403
EcoRV GATATC 1 cut(s) 1309
EgeI GGCGCC 1 cut(s) 1042
EheI GGCGCC 1 cut(s) 1042
Esp3I CGTCTC 1 cut(s) 1256
FaeI CATG 3 cut(s) 536, 705, 874
FaqI GGGAC 2 cut(s) 504, 693
FatI CATG 3 cut(s) 532, 701, 870
FbaI TGATCA 1 cut(s) 24
Fnu4HI GCNGC 1 cut(s) 217
FokI GGATG 1 cut(s) 1242
Fsp4HI GCNGC 1 cut(s) 217
FspBI CTAG 2 cut(s) 125, 591
GlaI GCGC 2 cut(s) 1042, 1101
GluI GCNGC 1 cut(s) 217
GsaI CCCAGC 2 cut(s) 144, 990
GsuI CTGGAG 1 cut(s) 86
HaeII RGCGCY 1 cut(s) 1044
HaeIII GGCC 2 cut(s) 1056, 1279
HapII CCGG 4 cut(s) 155, 720, 782, 800
HgaI GACGC 1 cut(s) 720
HhaI GCGC 2 cut(s) 1043, 1102
Hin1I GRCGYC 1 cut(s) 1041
Hin1II CATG 3 cut(s) 536, 705, 874
Hin6I GCGC 2 cut(s) 1041, 1100
HinP1I GCGC 2 cut(s) 1041, 1100
HindIII AAGCTT 1 cut(s) 167
HinfI GANTC 3 cut(s) 290, 810, 877
HpaII CCGG 4 cut(s) 155, 720, 782, 800
HphI GGTGA 4 cut(s) 344, 581, 895, 1280
Hpy166II GTNNAC 1 cut(s) 1193
Hpy188I TCNGA 9 cut(s) 240, 415, 509, 556, 736, 882, 896, 1020, 1213
Hpy188III TCNNGA 5 cut(s) 41, 103, 800, 911, 1073
Hpy8I GTNNAC 1 cut(s) 1193
Hpy99I CGWCG 2 cut(s) 944, 1040
HpyAV CCTTC 2 cut(s) 279, 510
HpyCH4III ACNGT 3 cut(s) 848, 1176, 1251
HpyCH4IV ACGT 1 cut(s) 664
HpyCH4V TGCA 6 cut(s) 211, 306, 863, 874, 1150, 1302
HpyF10VI GCNNNNNNNGC 1 cut(s) 976
HpyF3I CTNAG 3 cut(s) 199, 239, 506
HpySE526I ACGT 1 cut(s) 664
Hsp92I GRCGYC 1 cut(s) 1041
Hsp92II CATG 3 cut(s) 536, 705, 874
HspAI GCGC 2 cut(s) 1041, 1100
KasI GGCGCC 1 cut(s) 1040
Kpn2I TCCGGA 1 cut(s) 799
Ksp22I TGATCA 1 cut(s) 24
Kzo9I GATC 4 cut(s) 24, 611, 1008, 1213
LmnI GCTCC 2 cut(s) 348, 967
Lsp1109I GCAGC 1 cut(s) 228
LweI GCATC 2 cut(s) 60, 96
MaeI CTAG 2 cut(s) 125, 591
MaeII ACGT 1 cut(s) 664
MaeIII GTNAC 4 cut(s) 528, 569, 660, 921
MalI GATC 4 cut(s) 26, 613, 1010, 1215
MboI GATC 4 cut(s) 24, 611, 1008, 1213
MflI RGATCY 2 cut(s) 611, 1008
MhlI GDGCHC 1 cut(s) 1166
MlsI TGGCCA 1 cut(s) 1056
MluNI TGGCCA 1 cut(s) 1056
Mly113I GGCGCC 1 cut(s) 1041
MmeI TCCRAC 1 cut(s) 370
Mox20I TGGCCA 1 cut(s) 1056
MroI TCCGGA 1 cut(s) 799
MroXI GAANNNNTTC 2 cut(s) 289, 795
MscI TGGCCA 1 cut(s) 1056
MseI TTAA 8 cut(s) 62, 161, 258, 378, 447, 456, 626, 824
Msp20I TGGCCA 1 cut(s) 1056
MspA1I CMGCKG 1 cut(s) 219
MspCI CTTAAG 1 cut(s) 257
MspI CCGG 4 cut(s) 155, 720, 782, 800
MspR9I CCNGG 4 cut(s) 362, 405, 721, 782
Mva1269I GAATGC 2 cut(s) 308, 865
MvaI CCWGG 2 cut(s) 362, 405
MwoI GCNNNNNNNGC 1 cut(s) 976
NarI GGCGCC 1 cut(s) 1041
NciI CCSGG 2 cut(s) 721, 782
NdeII GATC 4 cut(s) 24, 611, 1008, 1213
NlaIII CATG 3 cut(s) 536, 705, 874
NlaIV GGNNCC 3 cut(s) 1042, 1163, 1253
NmuCI GTSAC 3 cut(s) 569, 660, 921
NspI RCATGY 1 cut(s) 874
PaeI GCATGC 1 cut(s) 874
PctI GAATGC 2 cut(s) 308, 865
PdmI GAANNNNTTC 2 cut(s) 289, 795
PfeI GAWTC 3 cut(s) 290, 810, 877
PflMI CCANNNNNTGG 2 cut(s) 1121, 1190
PkrI GCNGC 1 cut(s) 218
PluTI GGCGCC 1 cut(s) 1044
PmaCI CACGTG 1 cut(s) 665
PmlI CACGTG 1 cut(s) 665
Ppu21I YACGTR 1 cut(s) 665
PshAI GACNNNNGTC 1 cut(s) 741
Psp6I CCWGG 2 cut(s) 360, 403
PspCI CACGTG 1 cut(s) 665
PspFI CCCAGC 2 cut(s) 140, 986
PspGI CCWGG 2 cut(s) 360, 403
PspN4I GGNNCC 3 cut(s) 1042, 1163, 1253
PspPI GGNCC 1 cut(s) 1278
PstNI CAGNNNCTG 2 cut(s) 846, 880
PsuI RGATCY 2 cut(s) 611, 1008
RsaI GTAC 1 cut(s) 333
RsaNI GTAC 1 cut(s) 332
SaqAI TTAA 8 cut(s) 62, 161, 258, 378, 447, 456, 626, 824
SatI GCNGC 1 cut(s) 217
Sau3AI GATC 4 cut(s) 24, 611, 1008, 1213
Sau96I GGNCC 1 cut(s) 1278
ScaI AGTACT 1 cut(s) 333
ScrFI CCNGG 4 cut(s) 362, 405, 721, 782
SduI GDGCHC 1 cut(s) 1166
SfaNI GCATC 2 cut(s) 60, 96
SfcI CTRYAG 2 cut(s) 315, 1172
SfoI GGCGCC 1 cut(s) 1042
SmlI CTYRAG 3 cut(s) 31, 257, 335
SmoI CTYRAG 3 cut(s) 31, 257, 335
SpeI ACTAGT 1 cut(s) 590
SphI GCATGC 1 cut(s) 874
SsiI CCGC 2 cut(s) 219, 962
SspDI GGCGCC 1 cut(s) 1040
SspI AATATT 1 cut(s) 419
SspMI CTAG 2 cut(s) 125, 591
StyD4I CCNGG 4 cut(s) 360, 403, 719, 780
TaaI ACNGT 3 cut(s) 848, 1176, 1251
TaiI ACGT 1 cut(s) 667
TaqI TCGA 1 cut(s) 1035
TatI WGTACW 1 cut(s) 331
TfiI GAWTC 3 cut(s) 290, 810, 877
Tru1I TTAA 8 cut(s) 62, 161, 258, 378, 447, 456, 626, 824
Tru9I TTAA 8 cut(s) 62, 161, 258, 378, 447, 456, 626, 824
TscAI CASTG 1 cut(s) 1181
TseFI GTSAC 3 cut(s) 569, 660, 921
TseI GCWGC 1 cut(s) 216
Tsp45I GTSAC 3 cut(s) 569, 660, 921
TspDTI ATGAA 1 cut(s) 1260
TspGWI ACGGA 1 cut(s) 65
TspRI CASTG 1 cut(s) 1181
Van91I CCANNNNNTGG 2 cut(s) 1121, 1190
Vha464I CTTAAG 1 cut(s) 257
XapI RAATTY 3 cut(s) 557, 629, 785
XceI RCATGY 1 cut(s) 874
XmnI GAANNNNTTC 2 cut(s) 289, 795
XspI CTAG 2 cut(s) 125, 591
ZrmI AGTACT 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.